PSIBLAST alignment of GI: 254780755 and protein with PDB id: 3aq0
>gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) Length = 348
>gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) Length = 348
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L+ R
Sbjct: 12 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPE 71
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 72 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 131
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 132 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTAARYSMDYYMQKTY 191
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 192 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 251
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A + + + + N+ A + +++ +
Sbjct: 252 SDIRHGVITAPILFAMEEFPQLREVVDQVA-----ADPRNVDIALEYLGKSKGIQRAREL 306
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 307 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 346