PSIBLAST alignment of GI: 254780755 and protein with PDB id: 3pko
>gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate Length = 334
>gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate Length = 334
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + +L+ + D + I + L+ SGGK LRP + +
Sbjct: 21 VEPQLTALQDYLLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATPAQLQA 80
Query: 68 -ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAFCMVIETK 125
A AIE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + ++ T
Sbjct: 81 GAAAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 140
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG
Sbjct: 141 DRSLIQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAG 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
SV + G+ +G A+Q++DD+LDY G+ K + ED R+G +
Sbjct: 201 APQSVIDRTRDIGIAIGCAYQMLDDILDYAGDPKRTQKPVLEDLRSGVY---SLPLLLSL 257
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++F K +++E++K ++ + + + A Y +A ++ LP S
Sbjct: 258 SHAPRDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGS 317
Query: 306 WKKSLMEVVDFCLQRLN 322
++SL ++ L+R +
Sbjct: 318 AQQSLEQLTRLLLRRDH 334