BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate
synthase protein [Candidatus Liberibacter asiaticus str. psy62]
(322 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
Length = 322
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 145/321 (45%), Positives = 203/321 (63%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L ++ L Y
Sbjct: 4 QRIYDTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSRALGYNK 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+
Sbjct: 64 DEHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E ++ + ++ LS +AEGE+ QL KN DV+E+ Y+ VI +KTA+LF AA +
Sbjct: 124 VELQNLKIMDVLSHATAVIAEGEVLQLMNVKNPDVSEDKYMEVIHNKTAMLFEAASHTGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG S QAL +YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GKPTLP+I A
Sbjct: 184 LLAGANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAEAMGKNVGDDLAEGKPTLPLIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G+ EK + + G + +L + I+ + AL T RA + A D L L
Sbjct: 244 MANGSDDEKQLIRQAVRKGGLD--DLARILDIVNRSGALEYTMERAKGEAKAALDCLETL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S + +L + D + R++
Sbjct: 302 PESDHRNALALLTDVAVARVS 322
>gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
Length = 337
Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 167/322 (51%), Positives = 225/322 (69%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L +L DMEKVN LIL + S+VE+IP++ ++LI SGGKRLRPMLTLA A M Y
Sbjct: 16 IQGLVELVSGDMEKVNELILSKAGSNVELIPEIARHLIDSGGKRLRPMLTLAFAQMFGYE 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M
Sbjct: 76 GEGHVILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ +S EAL LS + +AEGE+ QL +++ T + YL VI++KTA LF+AA EVS
Sbjct: 136 MVDVRSLEALRILSEASAIIAEGEVLQLGAAQDTTTTYDMYLRVIEAKTAALFAAACEVS 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + +R A + +G+ LG AFQLVDD LDY G ++GK++G+DF GK TLPVI
Sbjct: 196 PEIADKGDEMRAAARKFGLELGYAFQLVDDALDYGGATVDLGKDVGDDFHEGKITLPVIY 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +RG+ +K FWK + DG I +L A ++ + AL DT RA YG A D+L
Sbjct: 256 AMERGSDEDKAFWKRCLEDGDIKDGDLDHAIKLLNDTGALADTVQRARDYGASAIDALSV 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
PD K++L E VDFC+ R++
Sbjct: 316 FPDGPAKQALKEAVDFCIARVS 337
>gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 323
Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + DL KDM+ VN LI +++ SDV +I + Y++ SGGKRLRP+L + + L Y
Sbjct: 3 LKSINDLAQKDMQGVNALIGEQLSSDVALINQLGMYIVNSGGKRLRPLLAVLSCRALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF M
Sbjct: 63 GRAHLSLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S L L+ +AEGE+ QL + D TE Y VI KTA LF AA +++
Sbjct: 123 MVQLDSMTILSILADATNVIAEGEVLQLMNCNDPDTTEARYFDVIYGKTAKLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ ++V + L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++
Sbjct: 183 GVLTEQDSTVTEQLADYGRYLGTAFQLVDDLMDYTSDSQTMGKNAGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + + I G E+L+ M AL T +A Q+A++SL
Sbjct: 243 AMWHGDEAARKLIREAIEQGD-GREHLETVLAAMHATGALEYTRQKALEVAQQARESLAV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R+
Sbjct: 302 LPESDYKQALIALTHLAVDRV 322
>gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
Length = 339
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 164/320 (51%), Positives = 226/320 (70%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ L K+M+ VN I +R+ SDV M+P++ +LI SGGKRLRPMLT+A + + Y G
Sbjct: 20 QLQALVAKEMQAVNEFIRERMASDVPMVPELASHLINSGGKRLRPMLTIAASRLCGYNGT 79
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+H+ LA +EF+HTATLLHDDVVD+S +RRG AR++WGNQ SVLVGDFLL +AF +++
Sbjct: 80 DHIKLAATVEFLHTATLLHDDVVDESDMRRGAKTARMLWGNQASVLVGDFLLGRAFKLMV 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
ETKS ALE ++ A +AEGE+ QL+ +K+ TE+ YL VI++KTA LF+AA E+ ++
Sbjct: 140 ETKSLRALEIIADAASVIAEGEVMQLAAAKDTGTTEDAYLRVIQAKTAALFAAATEIGAV 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I+ S AL+SYG NLGIAFQLVDD LDY G +GKN+G+DFR GK TLPV+LAF
Sbjct: 200 ISEKNGSEAAALESYGRNLGIAFQLVDDALDYGGRAASLGKNVGDDFREGKITLPVVLAF 259
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RG E+ FW+ T+ G +L+ A +M ++ AL DT RA YG A D+L P
Sbjct: 260 RRGNAEERAFWERTLQQGDRQEGDLEHAVDLMNKHAALEDTILRARHYGAIANDALAIFP 319
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS ++++L ++VDFC+ R +
Sbjct: 320 DSPYRQALTDLVDFCINRNH 339
>gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO2]
gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO2]
Length = 322
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 236/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 1 MQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 61 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 121 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 181 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYSGSAADLGKNTGDDFREGKITLPVIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 241 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
S K +L+EVVDFC+ R+N
Sbjct: 301 FKASPQKDALIEVVDFCISRVN 322
>gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
Length = 323
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G
Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGKDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + + I +G ++ L+ M+E +L T+ +A KA L L
Sbjct: 244 MMHGNEEQNAMIREAIENGN-GLDKLEPILACMKEVGSLEYTKQKADEEADKAIAELAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESDYKEALKALAHLAVKRS 322
>gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
Length = 323
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G
Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G K + + I +G ++ L M E +L T+ +A KA L L
Sbjct: 244 MMHGNKEQNAMIREAIENGN-GLDKLDPILACMEEVGSLEYTKQKADEEADKAIAELATL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESDYKEALKALAHLAVKRS 322
>gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
Length = 327
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 201/321 (62%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+
Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M
Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA +
Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++
Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + + N + I G EN+ + IM E+++L T +A + QKA D+L
Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-DRENIDEVLAIMAEHKSLDYTMSKAKAEAQKAVDALAI 305
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 306 LPESEYKQALISLAYLSVDRS 326
>gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
Length = 338
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 173/322 (53%), Positives = 235/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L LT DM VN LIL + SDVEMIP+V K+LI SGGKRLRPMLTL+ A ML Y
Sbjct: 17 IDPLLRLTADDMAAVNTLILSKCGSDVEMIPEVAKHLIDSGGKRLRPMLTLSAARMLGYT 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+HV LA ++EF+HTATLLHDDVVD+S +RRGK +AR+VWGNQ SVLVGDFLL QAF M
Sbjct: 77 GDHHVTLAASVEFMHTATLLHDDVVDESDMRRGKQSARMVWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL+ LS + +AEGE+ QLS +++++ TE+DY+ VI+ KTA LFSAA EV
Sbjct: 137 MVDAGSMEALDVLSTASMVIAEGEVMQLSAAQSMETTEDDYMAVIRGKTAALFSAACEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A R AL+SYG+NLG+AFQLVDD LDY G ++GKN+G+DF GK TLPV+L
Sbjct: 197 PILADAGKPARDALRSYGLNLGLAFQLVDDALDYGGSKADLGKNVGDDFHEGKITLPVLL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG+ E++FW++ + L A ++++++ A+ DT RA YG+ A+D+L
Sbjct: 257 AYRRGSDEERDFWRTNMEADNAGEGALDDAMVLLKKHGAIDDTVARARHYGEMARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP K +L++VVDFC+ R++
Sbjct: 317 LPAGEHKSALLDVVDFCIARVS 338
>gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
Length = 327
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 202/321 (62%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+
Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M
Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA +
Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++
Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + + N + I G + EN+ + IM E+++L T +A + QKA D++
Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-NRENIDEVLAIMAEHKSLDYTMEKAKAEAQKAVDAIAI 305
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 306 LPESEYKQALISLAYLSVDRS 326
>gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8]
gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Marinobacter aquaeolei VT8]
Length = 322
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L + Y+
Sbjct: 4 QRIYDTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIESGGKRLRPLLVLLASQAAGYQK 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+
Sbjct: 64 DDHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E +S + LS +AEGE+ QL KN D++E+ Y+ VI +KTA+LF AA +
Sbjct: 124 VELQSLPIMNVLSHATAVIAEGEVMQLMNVKNPDLSEDQYMVVIHNKTAMLFEAASHTGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+A ALK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A
Sbjct: 184 LLAKASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAETMGKNVGDDLAEGKTTLPLIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+G++ E+ + I G + +L K I++ + A+ T +A Q A+D L CL
Sbjct: 244 MAKGSEDERQLIRQAIRKGGLD--DLPKVLDIVKASGAIEYTMTKAKEQAQIARDLLACL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S +++L + + + R++
Sbjct: 302 PGSEHRQALELLTEVAVARVS 322
>gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
Length = 333
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 74 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 134 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 194 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I +E L + +M+E +L T +A KA L L
Sbjct: 254 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 312
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + ++R
Sbjct: 313 PESEYKEALITLAHVAVKRT 332
>gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
Length = 323
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 199/321 (61%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RPML + +A L Y+G
Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPMLAVLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V +AL++YG LG AFQL+DDV+DY + ++MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPEDVERALQNYGKYLGTAFQLIDDVMDYTSDGDDMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G++++ + + I ++ LK+ M E +L T +AY KA L L
Sbjct: 244 MQNGSEQQASMIREAIEKAN-GMDKLKEILAAMDETGSLEYTRQQAYKEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+S +K++L+ + + R +
Sbjct: 303 EESEYKQALITLAHMSVHRSS 323
>gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40]
gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40]
Length = 320
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 210/322 (65%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + +D +VN LI+ ++ SDV ++ ++ Y++ +GGKRLRP+L L TA L Y
Sbjct: 1 MQSFYKVVQEDFAEVNTLIVNQLHSDVGLVENIGHYIVDAGGKRLRPLLVLLTARALGYN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ L+ IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDFL S+AF M
Sbjct: 61 GNQHLSLSAIIEFIHTATLLHDDVVDVSALRRGRPTANANWGNAPSVLVGDFLYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E ++ L+ ++EGE++QL ++N +VTE++Y+ VI KTA LF AA E +
Sbjct: 121 MVEIGEMGIMKELANTTNVISEGEVQQLVNARNPEVTEQNYMTVIHKKTAALFEAACETA 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +A++SYG +LG+AFQLVDDVLDY+G+ E+GKN+G+D GKPTLP+I
Sbjct: 181 AILAGADAATCKAVRSYGYHLGVAFQLVDDVLDYQGDAEELGKNVGDDLAEGKPTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
G+ E K I S++ L++ I++ L T+ A + +AK ++
Sbjct: 241 TINNGSAEEAELVKQAII--NSSLDKLQQIVDIVQRRGGLEYTQQCAQDHINRAKQAIAL 298
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP++ ++ ++ ++ DF ++R +
Sbjct: 299 LPETEFRSAMEDLADFAIKRNH 320
>gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116]
Length = 323
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 196/321 (61%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPENVEVALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I ++ L+ +M+E +L T +A KA L L
Sbjct: 244 MRNTTPENTAMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKALEEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S +K++L+ + ++R +
Sbjct: 303 PESDYKQALVTLAHMAVKRTS 323
>gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
Length = 338
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 171/320 (53%), Positives = 231/320 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L D+++VN LIL+R SDV IP+V +LI +GGKRLRPML LATA M YR
Sbjct: 17 LDSLLALIGPDLQRVNQLILQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEF+HTATLLHDDVVD+S +RRGK+AAR++WGN+T VLVGDFLL AF M
Sbjct: 77 GDGHIKFAAGIEFMHTATLLHDDVVDESDMRRGKIAARMLWGNETCVLVGDFLLGHAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E L +S A +AEGE+ QL+ +K+ TE+ Y+ VI+SKTA LF+AA EV
Sbjct: 137 MVEPGVLPCLSVVSQAAAVIAEGEILQLNSAKDTQTTEDAYMAVIRSKTAELFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++G + A +SYGMNLGIAFQL+DD LDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 197 PMLSGRPKADEAACRSYGMNLGIAFQLIDDALDYGGQSAKLGKNVGDDFREGKITLPVVL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG++ E+ FW+ T+ G+I+ +++ A +M+++ AL DT RA YG A+D+L
Sbjct: 257 AFRRGSENEREFWRRTLEKGEIADGDVETACALMKKHDALKDTVERASHYGAIARDALEI 316
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S WK +L+EVVDFC+QR
Sbjct: 317 FPASPWKSALLEVVDFCVQR 336
>gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
Length = 322
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 137/321 (42%), Positives = 200/321 (62%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ DL DM+ VN LI KR+ SDV +I + Y+I SGGKRLRP++ L +A +Y+
Sbjct: 3 IQSTYDLIADDMQAVNGLIQKRLHSDVVLINQLGHYIINSGGKRLRPVVVLLSARAFDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M
Sbjct: 63 GSCHIDIATIIEFIHTATLLHDDVVDSSELRRGQKTANSIWGSEASVLVGDFLYSRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +E L+ T+AEGE+ QL + D TEE YL VI+SKTA LF AA ++
Sbjct: 123 MVDVNSMRVMEILARTTNTIAEGEVMQLLNCHDPDTTEERYLDVIRSKTAKLFEAATQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ + +A+ +YGM+LG AFQL DDVLDY +++GKNIG+D GKPTLP+I
Sbjct: 183 AVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ I G NL + + + A+ T A +KA +++
Sbjct: 243 AMRNGIPSHAEVIRNAIEGGGRD--NLAEVIEAIESSGAIAYTAKTARREAEKAIQAIKK 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S ++++L+ + F + R
Sbjct: 301 IPASPYQEALLNLAKFAVYRT 321
>gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329]
Length = 323
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I +E L + +M+E +L T +A KA L L
Sbjct: 244 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + ++R
Sbjct: 303 PESEYKEALITLAHVAVKRT 322
>gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
Length = 323
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G
Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + I G ++ L M+E +L T+ +A KA L +
Sbjct: 244 MNNGNAEQAAMIRHAIEQGN-GLDKLDPILACMKEVGSLEYTKQKADEEADKAIAELSII 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESEYKEALKALAHLAVKRS 322
>gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
Length = 323
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 194/321 (60%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A ++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPEEVEVAFQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I ++ L+ +M+E +L T +A KA L L
Sbjct: 244 MRNTTPENAQMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKAMDEADKAIAELAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S +K++L+ + ++R +
Sbjct: 303 PESDYKQALITLAHMAVKRTS 323
>gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
Length = 323
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRPML + + L Y+G
Sbjct: 4 NTIQALTADDMAKVDQKILAQLNSDVALINQLGFYIVSGGGKRLRPMLAVLSGRALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGD++ +++F M+
Sbjct: 64 EGHITAAAFIEFIHTATLLHDDVVDESDLRRGKATANAMFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E +S L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELRSLRILDLMSKATNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + A++ YG LG AFQL+DDV+DY + +EMGKN G+D GKPTLP++ A
Sbjct: 184 ILADASEEIETAMQDYGRYLGTAFQLIDDVMDYTSQGDEMGKNTGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
GT + + I G ++ L + M +L T RA KA ++L +
Sbjct: 244 MANGTPEQAAMIREAIEQGN-GLDKLAQILACMEACGSLEYTRQRAEDEADKAINALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESEYKEALKALAHIAVRRK 322
>gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 356
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 184/322 (57%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y
Sbjct: 35 VQPLVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYE 94
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 95 GDGHVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 154
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 155 MVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 215 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I DG +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 275 SYRRGTDDERAFWKHAIEDGASDDASLEKAIGLMTKHGAIADTVQRARHFGEIARDALAP 334
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + K +L+EV+DFC+ R+N
Sbjct: 335 LKATPQKDALIEVIDFCISRVN 356
>gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 335
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 176/322 (54%), Positives = 228/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + YR
Sbjct: 14 IEALVALVKADMERVNATILARTGSDVAMIPEVANHLISSGGKRLRPMLTLACASLSGYR 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M
Sbjct: 74 GDGHVKLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKM 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L+ L+ AC +AEGE+ QL+ +KN +E+DYL VI+ KTA LF+AA EV
Sbjct: 134 MVEVGSMTCLDILATAACVIAEGEVMQLAAAKNTATSEDDYLAVIRGKTAELFAAACEVG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + + A +SYGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 194 AVLGQRPKAEQAACRSYGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW+ + G+ + +L +A +M +RA+ DT RA YG AKD+L
Sbjct: 254 AFRRGDASERAFWQRCLEKGEGNDADLDQAIGLMTRHRAIADTVERARHYGAIAKDALAL 313
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+ K +LME VDFCL R +
Sbjct: 314 FPNGQAKDALMEAVDFCLSRAH 335
>gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
Length = 323
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G
Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILNEAPAEVELALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT+ + + I +E L M E +L T +AY KA L L
Sbjct: 244 MEHGTEEQTQMIREAIEKAN-GMERLNDILATMEETGSLEYTRKKAYQEADKAIAELDVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
DS +K++L+ + + R +
Sbjct: 303 DDSVYKQALITLAHMSVHRSS 323
>gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
3TCK]
gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
3TCK]
Length = 323
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM +V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G
Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+S + L+ +S +AEGE+ QL + + TE++Y+ VI SKTA LF AA ++S+
Sbjct: 124 TSLRSLKILDVMSEATNVIAEGEVLQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + + I ++ L MRE +L T+ RA KA +L +
Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEADKAIAALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+S +K++L+++ ++R
Sbjct: 303 AESDYKEALIQLAHLAVKRT 322
>gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4]
gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4]
Length = 323
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYHG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL N D TEE+Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSIKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEENYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPENVEVALQNYGKFLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
T + I ++ L++ +M++ +L TE +A KA L L
Sbjct: 244 MHNTTPENAAMIREAIEKAN-GMDRLEEILAVMQDAGSLAYTEQKAVEEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S +K++L+ + ++R +
Sbjct: 303 PESDYKQALITLAHMAVKRTS 323
>gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
Length = 323
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
NH A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SNHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQVLMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
Length = 323
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I ++ L++ +M+E +L T +A KA L L
Sbjct: 244 MRNTTPENAIMIREAIEKAN-GMDRLEEILAVMKEAGSLEYTTQKALEEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + +QR
Sbjct: 303 PESEYKQALVTLAHVAVQRT 322
>gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase (opp synthetase) [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase (opp synthetase) [Photorhabdus asymbiotica]
Length = 323
Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 130/322 (40%), Positives = 189/322 (58%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + A L Y+
Sbjct: 3 LESIIKLTADDMAAVNEAILSQLNSDVALINQLGYYIISGGGKRIRPIIAILAARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M
Sbjct: 63 SDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S
Sbjct: 123 MTTLNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++
Sbjct: 183 AIISNATPEQETALQDYGRYLGTAFQLIDDLLDYDADSNTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + I G L+ I M++ +L T RA KA +L+
Sbjct: 243 AMNHGNPEQSQLIRKAIEKGN-GRHLLETVLITMKQCGSLEYTRKRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S +K++L+ + +QRL+
Sbjct: 302 LESSPYKQALVGLAHIAVQRLS 323
>gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
Length = 323
Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +
Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + I ++ L+ +M+E +L T +A KA + L L
Sbjct: 244 MRNTTPDNALMIREAIEKAN-GMDRLEDILAVMKEAGSLEYTTQKALEEADKAIEELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + +QR
Sbjct: 303 PESEYKQALITLAHVAVQRT 322
>gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
Length = 323
Score = 189 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 323
Score = 189 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RP+L + +A L Y+G
Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPLLAVLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 QAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPSEVETALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q GT + + I +E L M + +L T +AY KA L L
Sbjct: 244 MQHGTPEQTQMIREAIEKAN-GMEKLDSIMEAMEQTGSLEYTRQKAYQEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+S +K++L+ + + R
Sbjct: 303 SESPYKEALVTLAHMSVHRS 322
>gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
Length = 356
Score = 189 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 181/322 (56%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y
Sbjct: 35 VQPLVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYE 94
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 95 GDGHVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 154
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 155 MVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + + R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 215 PIIAGARPADRVALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I +G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 275 SYRRGTDDERAFWKHAIEEGASDDASLQKAIGLMTKHGAIADTVQRARHFGEIARDALAP 334
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + K +L+EV+DFC+ R+N
Sbjct: 335 LKATPQKDALIEVIDFCISRVN 356
>gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 322
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR
Sbjct: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM
Sbjct: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS
Sbjct: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL
Sbjct: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC
Sbjct: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDSSWKKSLMEVVDFCLQRLN
Sbjct: 301 LPDSSWKKSLMEVVDFCLQRLN 322
>gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
K84]
gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
K84]
Length = 455
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 193/322 (59%), Positives = 250/322 (77%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V ++LI SGGKRLRPMLT+A+A + Y+
Sbjct: 134 IKPLVDLTKADMERVNQLILSKAGSDVQMIPEVAEHLISSGGKRLRPMLTIASAALYNYQ 193
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 194 GDNHIKLATSVEFLHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 253
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S EAL+ LS AC +AEGE+ QLS+SKN++ TE+DYL VI++KTA LFSAA EV
Sbjct: 254 MVEVGSLEALDVLSSAACVIAEGEVLQLSVSKNMETTEDDYLSVIRAKTAALFSAAAEVG 313
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYG NLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 314 PIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 373
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT++E+ FW+ I G S ENL+KA ++ + AL DT RA YG A+D+L
Sbjct: 374 AYRRGTEKERAFWREAIETGNNSDENLEKALGLITKYGALNDTIARAVHYGTIARDALAP 433
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP++ WK +LMEV+DFC++R+N
Sbjct: 434 LPETPWKSALMEVIDFCIERVN 455
>gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella abortus str. 2308 A]
gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella abortus str. 2308 A]
Length = 363
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 42 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 101
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 102 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 161
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 162 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 221
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 222 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 281
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 282 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 341
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 342 LKASPQKDALIEVVDFCISRVN 363
>gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella ceti str. Cudo]
gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella ceti str. Cudo]
Length = 363
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 42 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 101
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 102 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 161
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 162 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 221
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 222 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 281
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 282 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 341
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 342 LKASPQKDALIEVVDFCISRVN 363
>gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
9-941]
gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19]
gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str.
Tulya]
gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str.
86/8/59]
gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis
M163/99/10]
gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94]
gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1]
gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1]
gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis
M292/94/1]
gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33]
gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94]
gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str.
C68]
gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99]
gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. NF 2653]
gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO1]
gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
9-941]
gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19]
gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO1]
gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. NF 2653]
gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28]
gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 338
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 17 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 197 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 257 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 317 LKASPQKDALIEVVDFCISRVN 338
>gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella melitensis bv. 1 str. 16M]
gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella melitensis bv. 1 str. 16M]
Length = 362
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 41 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 100
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 101 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 160
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 161 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 220
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 221 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 280
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 281 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 340
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 341 LKASPQKDALIEVVDFCISRVN 362
>gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457]
gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str.
870]
gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13]
gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str.
292]
gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str.
Ether]
gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1]
gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
Length = 340
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340
>gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
Length = 323
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTADDMAKVDKTILAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSHSVNIIAEGEVLQLMNCNDPETTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V +A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 MLCDASPEVERAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + I +E L M++ +L T +A KA L L
Sbjct: 244 MRNSQGEQSAMIREAIEKAN-GMEKLTAILATMQQAGSLEYTTAKAQQEADKAIAELAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + ++R
Sbjct: 303 PESDYKQALIALAHMAVKRT 322
>gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 342
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 167/322 (51%), Positives = 226/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L D+E +N +IL + SDVEMIP++ +LI SGGKRLRPML LA+A + Y
Sbjct: 21 LEPLLALVADDLEAINRIILDKAVSDVEMIPELAHHLIDSGGKRLRPMLALASAKLCGYG 80
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ A A+EF+HTATLLHDDVVD+SA RRG+ AR++WGNQ SVLVGDFLL QAF M
Sbjct: 81 GNGHIRTASAVEFMHTATLLHDDVVDESATRRGRKTARMIWGNQASVLVGDFLLGQAFKM 140
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S L +S A T+AEGE+ QL+ +KN TE+DYL +I +KTA LFSAA E
Sbjct: 141 FVDVGSLPVLRIMSNAAATIAEGEVMQLAAAKNTSTTEDDYLAIINAKTAALFSAAAESG 200
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + AL+SYG NLG+AFQLVDD LDY G+ + +GK++G+DFR GK TLPVIL
Sbjct: 201 AALTQRPPEEQSALRSYGKNLGLAFQLVDDALDYAGDSSRLGKSVGDDFREGKITLPVIL 260
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+F+RG+ E+ FW TI DG I+ +L++A MR+++A+ T RA SYG A+D+L
Sbjct: 261 SFRRGSPEERQFWNRTIADGDINDGDLEQAVGFMRKHKAIEATFERARSYGAIARDALAI 320
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
PDS K +L +V+ FC+ R +
Sbjct: 321 FPDSREKDALEQVIAFCIGRSH 342
>gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 323
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 128/322 (39%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + + +L Y+
Sbjct: 3 LETIIKLTADDMAAVNETILSQLNSDVTLINQLGYYIISGGGKRIRPIIAILASRVLGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAMFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S
Sbjct: 123 MTALNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL++YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++
Sbjct: 183 AILSNATPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ M++ +L T RA KA +L+
Sbjct: 243 AMNHGTPEQSALIREAIEKGN-GRHLLETVLTTMKQCGSLEYTRKRAEEEADKAIAALQA 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L +S +K++L+ + +QRL+
Sbjct: 302 LENSPYKQALVGLAHIAVQRLS 323
>gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
Length = 323
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
Length = 323
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15]
Length = 322
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 138/321 (42%), Positives = 198/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D D +VN LI++R+ SDV ++ + +Y+I SGGKRLRP+L L ++ Y
Sbjct: 4 QRIYDTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSQAAGYEE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+
Sbjct: 64 NDHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E KS ++ LS +AEGE+ QL KN D+TEE Y+ VI +KTA+LF AA +
Sbjct: 124 VELKSLRIMDVLSHATAVIAEGEVMQLMNVKNPDLTEEQYMKVIHNKTAMLFEAASHTGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+A LK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A
Sbjct: 184 LLAHASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAEAMGKNVGDDLAEGKTTLPLIHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
GT E+ + I G + +L + I+ + A+ T +A + A+ L L
Sbjct: 244 MSHGTGEERQLIRQAIRKGGLD--DLPRILDIVERSGAIEYTMAKAREQAELAQTCLLSL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PDS K+++ + + + R++
Sbjct: 302 PDSGHKEAMELLTEVAVARVS 322
>gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
Length = 322
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+
Sbjct: 4 QAFYRVVADDFTAVDAIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQA 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHAAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG + R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I
Sbjct: 184 ALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT+ + + I G I E+L+ + AL T A Y ++A L L
Sbjct: 244 MREGTEEQAALVRRAIQKGGI--EDLESIRAAVDAAGALDYTAQLARDYAERAIACLDVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P ++ +L+E+ F + R +
Sbjct: 302 PAGEYRDALIELSRFAVARTH 322
>gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
Length = 338
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 248/322 (77%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 17 VKPLVDLTRADMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL
Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 SYRRGTQDERAFWRNAIENGESSDENLEKALGLIAKYNGLGDTIGRATHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S WK +L+EV+DFC++RLN
Sbjct: 317 LPESPWKNALLEVIDFCIERLN 338
>gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
Length = 348
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
Length = 338
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 184/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 VKPLVDLTQSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDGHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVASASKADRNALKSYGTNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT +++ FW+ I G NL+KA ++ L DT RA YG A+D+L
Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDEANLEKALSLIHRYGGLTDTIARAKHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S K +L+EV+DFC+ R++
Sbjct: 317 LPVSPCKSALVEVIDFCIDRVS 338
>gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|255738566|gb|EET93954.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
Length = 323
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
Length = 348
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60]
Length = 323
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITELTAQDMADVNARILHQLNSDVALINQLGYYIISGGGKRIRPMIAVLAARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAGADTAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G+ + I G L+ M++ +L T RA KA +L
Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLEPVLETMQQAGSLDYTRSRAEEEADKAIAALAP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS K++L+ + + + R
Sbjct: 302 LPDSPHKQALIGLANLAVNRS 322
>gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 248/322 (77%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 37 VKPLVDLTRADMEQVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 97 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL
Sbjct: 217 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L
Sbjct: 277 SYRRGTQDERAFWRNAIENGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S WK +L+EV+DFC++RLN
Sbjct: 337 LPESPWKNALLEVIDFCIERLN 358
>gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320]
gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320]
gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
Length = 323
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+
Sbjct: 3 LESIIKLTSADMAAVNDAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GDKHISVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + D+TE+DY+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSSATNVIAEGEVLQLMNCNDPDITEDDYMQVIYSKTARLFEAASHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G +A + YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++
Sbjct: 183 AILCGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + E + I G L M++ +L T +A KA ++L
Sbjct: 243 AMHHGNETESQLIRQAIEKGN-GRHLLDTVLKTMKQCGSLEYTRQKAEEEADKAIEALAI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDSS+K +L+ + +QR +
Sbjct: 302 IPDSSYKDALIGLAHVAVQRQS 323
>gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 324
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 134/321 (41%), Positives = 191/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + L DM VN LI +++ SDV +I + Y++ SGGKRLRP+L + L Y
Sbjct: 4 MQSINALAKDDMLGVNALIGEQLQSDVALINQLGLYIVNSGGKRLRPLLAILACRALGYE 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF +
Sbjct: 64 GNDHRKLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S L L+ ++EGE+ QL + D +E Y +VI KTA LF AA E++
Sbjct: 124 MVDLDSLRILRILADATNIISEGEVLQLMNCNDPDTSEASYFNVIYGKTAKLFEAATELA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ V Q L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++
Sbjct: 184 GVLTAQDEKVTQQLADYGRYLGTAFQLVDDLMDYTADSESMGKNAGDDLAEGKPTLPLLY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + E+ + I G E+L+ M AL T +A ++A++SL
Sbjct: 244 AMWHGNEIEQKLIREAIEQGD-GREHLQTVLTAMERTGALQYTRDKALEAAEQARESLSE 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++L+ + + R+
Sbjct: 303 LPDSDYKQALLTLTHLAVDRV 323
>gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 338
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 160/322 (49%), Positives = 230/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L +M +VN +IL + SDV +IP++ ++LI SGGKRLRPMLT+ A M Y
Sbjct: 17 LEPLLRLVHDEMGEVNNIILSQARSDVALIPELARHLINSGGKRLRPMLTIGAAKMCGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H++LA ++EF+HTATLLHDDVVD+S +RRGK +AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GTGHIMLAASVEFMHTATLLHDDVVDESDMRRGKKSARMLWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S AL+ LS + +AEGE+ QL+ SKNL TEE+YL+VI SKTA LF+AA E+
Sbjct: 137 MVDVGSLGALKVLSEASSVIAEGEVWQLAASKNLATTEEEYLNVIISKTAALFAAAAEIG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + AL+ YG N+G+AFQL+DD LDY GE +GK +G+DFR GK TLPV+L
Sbjct: 197 AILTNRGPEEQAALRLYGTNIGLAFQLIDDALDYSGEAASLGKCVGDDFREGKITLPVVL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FW+ T+ +G I +L+ A IMR + A+ +T RA YG++A+++L
Sbjct: 257 SYRRGTPEERAFWRRTLQEGSIEDGDLEHAIQIMRRHNAIEETIQRAVYYGKEAREALAI 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P +K+L++ VDF + R++
Sbjct: 317 FPAGEARKALIDAVDFSIARMH 338
>gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
Length = 348
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
Length = 323
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCDASSEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLRYTIEKAQHEADKAIAELDIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 303 PESEYKQALITLAHMAVNRS 322
>gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
Length = 323
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/321 (41%), Positives = 194/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L+Y+
Sbjct: 3 LEQIIELTAQDMAAVNATILDQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M
Sbjct: 63 GNKHIKIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L+ +S +AEGE+ QL N D+TE+ Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLQLMSEATNVIAEGEVMQLMNCNNPDITEDSYMRVIYSKTARLFEAASQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++A A + YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++
Sbjct: 183 SILADASPEQEMAFQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I +G L+ MR+ +L T RA KA +L+
Sbjct: 243 AMNNGTAEQAAMIRKAIEEGN-GRHLLEPVLEAMRQCGSLDYTRQRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L + +QR
Sbjct: 302 LPDTPYRQALEGLAHIAVQRQ 322
>gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
Length = 348
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330]
gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686]
gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330]
gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
Length = 340
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 139 MVDVGSFDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 259 SYRRGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340
>gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
[polymorphum gilvum SL003B-26A1]
gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
[Polymorphum gilvum SL003B-26A1]
Length = 336
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 161/322 (50%), Positives = 223/322 (69%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DL +DME VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+
Sbjct: 15 IQSLVDLVARDMEAVNRLILSKAGSNVDLIPEIAKHLIDSGGKRLRPMLTLALADMFGYQ 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV L+ ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M
Sbjct: 75 GSGHVTLSASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ + +AEGE+ QL +KNL +E Y+ VI++KTA LF+AA EV
Sbjct: 135 MVDVGSLEALRVLAEASAVIAEGEVMQLGAAKNLATSEASYMKVIEAKTAALFAAAAEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG A + YGM LG+AFQLVDD LDY G ++GK +G+DFR GK TLPV++
Sbjct: 195 PIIAGQSAETCAAARRYGMELGLAFQLVDDALDYGGSSADLGKQVGDDFREGKITLPVVV 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +RG+ ++ FW+ + I +L+ A ++R + A+ +T RA YG A ++L
Sbjct: 255 AVERGSDEDRAFWRRCLETDGIRDGDLEHAIGLLRRHGAIEETIARARHYGASAIEALAA 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP + +L E V+FC+ R+N
Sbjct: 315 LPAGRHRDALHEAVEFCISRVN 336
>gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
Length = 348
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAAL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
Length = 340
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 186/322 (57%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L SS K +L+EVVDFC+ R+N
Sbjct: 319 LKASSQKDALIEVVDFCISRVN 340
>gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
C58]
gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
C58]
Length = 338
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 192/322 (59%), Positives = 246/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 17 VKPLVDLTRPDMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL
Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 SYRRGTQDERAFWRNAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC++RLN
Sbjct: 317 LPQSPWKNALLEVIDFCIERLN 338
>gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
Length = 328
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 183/322 (56%), Positives = 235/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 7 VQPLVDLTRADMARVNELILSCAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 67 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 127 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 187 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSATDLGKNTGDDFREGKITLPVIL 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ F K I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 247 SYRRGTDEERAFCKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 306
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 307 LKASPQKDALIEVVDFCISRVN 328
>gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
Length = 345
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 133/321 (41%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G
Sbjct: 26 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 85
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 86 EAHTTSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 145
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 146 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 206 ILNDAPEDVELALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I +E L M + +L T +AY KA L L
Sbjct: 266 MKNGSAEQTAMIREAIEKAN-GMERLNDILAAMEQTGSLEYTRQKAYQEADKAIAELNVL 324
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+S +K++L+ + + R +
Sbjct: 325 EESVYKQALVTIAHMAVHRTS 345
>gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 336
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 176/322 (54%), Positives = 229/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336
>gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
Length = 340
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 186/322 (57%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L
Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAP 318
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340
>gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513]
Length = 338
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 186/322 (57%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 17 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 197 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L
Sbjct: 257 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 317 LKASPQKDALIEVVDFCISRVN 338
>gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 246/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL
Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L
Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC++RLN
Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358
>gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 246/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL
Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L
Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC++RLN
Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358
>gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium
meliloti 1021]
gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti
1021]
gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
Length = 338
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 187/322 (58%), Positives = 241/322 (74%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLTL DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 VKPLVDLTLSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L
Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC+ R++
Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338
>gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
Length = 336
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 167/321 (52%), Positives = 229/321 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L D+E+ N LI++R SDV IP+V +LI +GGKRLRPML LATA M Y+
Sbjct: 15 LDSLLTLIGPDLERTNQLIIQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYK 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEF+HTATLLHDDVVD+S +RRGK+AAR++WGNQT VLVGDFLL AF M
Sbjct: 75 GDGHLKFAAGIEFMHTATLLHDDVVDESNMRRGKIAARMLWGNQTCVLVGDFLLGHAFKM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E L +S A +AEGE+ QL+ +K+ TE+ Y+ VI+ KTA LF+AA EV
Sbjct: 135 MVEPGMVPPLTVVSQAAAVIAEGEILQLNAAKDTTTTEDAYMAVIRRKTAELFAAAAEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + A +SYGMNLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 195 VMLANKPKADEAAARSYGMNLGIAFQLIDDALDYGGSSAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG ++E+ FW+ T+ G+I+ +++ A +M++++AL DT RA YG A+D++
Sbjct: 255 AFRRGNEKEREFWRRTLEKGEINDGDVETACGLMKKHKALDDTIERAAHYGAIARDAMEI 314
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S WK +L+EVVDFC++R+
Sbjct: 315 FPASPWKSALLEVVDFCIERV 335
>gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 333
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 74 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 134 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 194 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + I + +E L +M++ +L TE +A KA L+ L
Sbjct: 254 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 312
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + ++R
Sbjct: 313 PESEYKQALIALAHMAVKRS 332
>gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C]
Length = 337
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 168/322 (52%), Positives = 225/322 (69%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L LT +DME VN LI+ S+V +IP++ YLI SGGKR+RPM+TLATA M Y+
Sbjct: 16 LHPLFSLTKEDMECVNQLIISMAQSNVAIIPEISNYLISSGGKRIRPMITLATAHMFGYQ 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M
Sbjct: 76 GDKHIKLATAVEFMHTATLLHDDVVDESELRRGKSTARIIWGNQASILVGDFLLGQAFKM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV
Sbjct: 136 MVDVGSLDALSVLSNAAAIIAEGEIMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL
Sbjct: 196 PIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ RG EK FWK + + E LK A ++ + L DT +A YG++A D+L
Sbjct: 256 SYTRGNDIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSS 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ D+ K +L++++DFC++R+N
Sbjct: 316 IKDNPAKNALIDIIDFCIERIN 337
>gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009]
gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009]
gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 336
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 176/322 (54%), Positives = 229/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALDDTIQRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336
>gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
Length = 340
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y
Sbjct: 19 VQPLVDLTRADMARVNELILSRAASDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV
Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL
Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L
Sbjct: 259 SYRRGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S K +L+EVVDFC+ R+N
Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340
>gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
Length = 348
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G
Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+
Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + + I + L + M + +L T +A KA L L
Sbjct: 269 MQHGNAEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + + R
Sbjct: 328 PESEYKQALITLAHMAVNRS 347
>gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
Length = 322
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 198/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRPVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A ++ R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAEATDAQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + E+ AL T A Y ++A L L
Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALQYTAELARDYVKRAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
Length = 341
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 198/322 (61%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DM+ V+ LI K + SDV +I V +Y+I SGGKRLRP L L +A + YR
Sbjct: 22 VQQLFAPIAADMQAVDALIRKALYSDVVLIRQVAEYIINSGGKRLRPALVLFSAGAVGYR 81
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA +EFIHT+TLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M
Sbjct: 82 GTQHHRLAAVVEFIHTSTLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQM 141
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA +
Sbjct: 142 MVEVDSMRVMQILADATNIIAEGEVLQLLNCHNADVEVEDYLRVIRYKTAKLFEAASRLG 201
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G ++ +++ ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I
Sbjct: 202 AVLGGADPALEESMAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIH 261
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q G+ + + I +G + +++ AL T A +A +L+
Sbjct: 262 VMQHGSAEQAALVRGAIENGGRD--DFAAVLAAIQQTGALEVTRRHAREEADRAIAALQG 319
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S++K+SL+++ DF ++R +
Sbjct: 320 LPPSNFKESLLQLSDFAVERNH 341
>gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 134/321 (41%), Positives = 196/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + +A L Y
Sbjct: 3 LEQITELTAQDMADVNATILQQLNSEVSLINQLGYYIISGGGKRIRPMIAVLSARALNYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLQSLRVLELMSEATNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAGATHEQEIALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G+ + I +G L+ M E +L T RA KA +L
Sbjct: 243 AMQNGSPERSAMIRKAIEEGN-GRHLLEPVLETMHEVGSLTYTRQRAEEEADKAISALDV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + + R
Sbjct: 302 LPESPYKEALIGLANMAVDRK 322
>gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
Length = 328
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ML +++E VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 7 EMLAATLSQELEAVNVLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 67 GDHHVKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET+S L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV
Sbjct: 127 MVETESLRVLDILANASATIAEGEVLQMTAASNLKTDEGIYLQVVRGKTAALFSAATEVG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 187 GVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI GK +L++A +M + L T A + KA+ +L
Sbjct: 247 AVAQATDEERAFWTRTIEKGKQQDGDLEQALALMAKYGTLEATRQDALGWAAKARAALEV 306
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L ++ D+ + RLN
Sbjct: 307 LPDHEIRTMLSDLADYVVARLN 328
>gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
Length = 338
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 182/322 (56%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYS 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA A+EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GEGHVKLATAVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG+K E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L
Sbjct: 257 AYRRGSKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L ++ K +L++V+DFC+ R+N
Sbjct: 317 LEETPQKSALIDVIDFCISRVN 338
>gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
Length = 327
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 196/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+
Sbjct: 7 LEQILTLVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYK 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M
Sbjct: 67 GQEHITCAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + L+ +S +AEGE++QL N + TE +Y+ VI SKTA LF AA + S
Sbjct: 127 MASLCSLDVLQVMSDATNVIAEGEVQQLMNVNNPETTEANYMQVIYSKTARLFEAASQCS 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++
Sbjct: 187 AIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E L + IM E+++L T RA QKA D++
Sbjct: 247 AMRSGNLQQAALIREAIEQGGK-REALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAI 305
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 306 LPESEYKQALISLAYLSVDRS 326
>gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 323
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G
Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + I + +E L +M++ +L TE +A KA L+ L
Sbjct: 244 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ + ++R
Sbjct: 303 PESEYKQALIALAHMAVKRS 322
>gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
Length = 338
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 186/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L LT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 VKPLVGLTAADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDAHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + R ALKSYGMNLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVASASRADRNALKSYGMNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT ++ FW+ I G NL KA ++R L DT RA YG A+D+L
Sbjct: 257 SYRRGTPEDRAFWREAIEGGVTDAANLDKALGLIRRYGGLTDTIARAQHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC+ R++
Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338
>gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1]
Length = 346
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 153/319 (47%), Positives = 221/319 (69%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G
Sbjct: 26 DTLVSLVKDDLEKVNRTIIDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHSG 85
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ HV LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F ++
Sbjct: 86 ERHVKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELM 145
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S L LS + +AEGE+ QL + + D +E+ YL VI+SKTA LF+AA + +
Sbjct: 146 VEDGSLPVLAILSRASSVIAEGEVLQLITANDTDTSEDSYLEVIRSKTAALFAAACRIGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + AL SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLP+ILA
Sbjct: 206 IVADRPKAEEDALDSYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPIILA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
F+RG ++ FW+ T+ + +L++A +M ++ AL DT RA YG+ A+D+L
Sbjct: 266 FRRGNDEQREFWRRTVERLEQQDGDLEQAIALMEKHGALADTIARARHYGEVARDALALF 325
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS K+++++V+DFC+ R
Sbjct: 326 PDSPVKQAMIDVIDFCIDR 344
>gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 132/319 (41%), Positives = 197/319 (61%), Gaps = 1/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G
Sbjct: 5 TIQALTADDMAKVNETIHAQLNSDVTLINQLGFYIVSGGGKRVRPLLAIISAKALGYKGQ 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H L A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 65 GHTLSAAFIEFIHTATLLHDDVVDESDMRRGKATANSAFGNAASVLVGDYIYTRSFQMMT 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E S + L+ +S +AEGE++QL + +V+EE Y+ VI SKTA LF A +V ++
Sbjct: 125 ELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPNVSEESYMQVIYSKTARLFEVATQVGAV 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++ + + ALK+YG LG AFQL+DDV+DY EMGKN+G+D GKPTLP+I A
Sbjct: 185 LSEAPSEIEIALKNYGRYLGTAFQLIDDVMDYTSTGKEMGKNVGDDLAEGKPTLPLIHAM 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q + + K I + +++L++ IM++ +L +AY KA L C+P
Sbjct: 245 QTSSPEQSQLIKQAIENAN-GMDHLQEILDIMKQTGSLDYARQKAYQEADKAISELNCIP 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+S +K++L+ + + R
Sbjct: 304 ESDYKQALITLAHMSVNRK 322
>gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
Length = 327
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 198/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+
Sbjct: 7 LEQILTLVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYK 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M
Sbjct: 67 GQEHITCAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S + L+ +S +AEGE++QL + + TE +Y+ VI SKTA LF AA + S
Sbjct: 127 MASLRSLDVLQVMSDATNVIAEGEVQQLMNVNDPETTEANYMQVIYSKTARLFEAASQCS 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++
Sbjct: 187 AIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G +++ + I G E L + IM E+++L T RA QKA D++
Sbjct: 247 AMRSGNRQQAALIREAIEQGGK-REALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAI 305
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 306 LPESEYKQALISLAYLSVDRS 326
>gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 1_1_43]
gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 1_1_43]
Length = 340
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 319 LPDTPWREALIGLAHIAVQR 338
>gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 336
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 175/322 (54%), Positives = 231/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IERLLALVTPDMERVNQTILSRAASDVTMIPEVANHLISSGGKRLRPMLTLAAAGLCGYG 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GNGHIKLAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S LE LS A +AEGE+ QL+ +K+ + E+DYL VI++KTA LF AA EV
Sbjct: 135 MVEVGSLACLEVLSTAAAVIAEGEVMQLAAAKDTETGEDDYLAVIRAKTAALFGAAAEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+A + A +SYG+NLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 195 ALLAERPKAEIAACRSYGLNLGIAFQLIDDALDYGGTSAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
F+RGT+ E+ FW+ T+ G+I +L A MR++RA+ DT RA YG A+D+L
Sbjct: 255 CFRRGTQDERIFWRRTLEKGEIEEGDLDIAIATMRKHRAIEDTVERARHYGAMARDALEL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S WK +L +VVDFC+ R++
Sbjct: 315 FPASPWKIALNDVVDFCVNRIS 336
>gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
Length = 323
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 132/322 (40%), Positives = 195/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+
Sbjct: 3 LESIIKLTSADMTAVNEAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GDKHISVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSSATNVIAEGEVLQLMNCNDPDISEDDYMQVIYSKTARLFEAASHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G +A + YG LG AFQL+DD+LDY + N++GKN G+D GKPTLP++
Sbjct: 183 AILSGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNNQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + E + I G L M++ +L T +A KA ++L
Sbjct: 243 AMHNGNEEESKLIRQAIEQGN-GRHLLDTVLNTMKQCGSLEYTRQKAEEEADKAIEALSI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P+S +K +L+ + +QR +
Sbjct: 302 IPNSPYKDALIGLAHVAVQRQS 323
>gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp]
gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp]
Length = 322
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+
Sbjct: 4 QAFYRVVADDFTAVDGIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQA 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG + R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I
Sbjct: 184 ALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G++ + + I G I E+L+ + AL T A Y ++A L L
Sbjct: 244 MREGSEEQAALVRRAIQKGGI--EDLESIRAAVDAAGALDYTARLARDYAERAIACLDVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P ++ +L+E+ F + R +
Sbjct: 302 PAGEYRDALIELSRFAVARTH 322
>gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 322
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALIELSEFAVARTH 322
>gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
Length = 341
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 174/322 (54%), Positives = 229/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DM++VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 20 IDQLVELVAADMKRVNATILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 80 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 140 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 199
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 200 PAIAERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 259
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW ++ G+I+ +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 260 AFRRGNDSERAFWIKSLERGEITDTDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALAL 319
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 320 FPQSPMKTALEQVVAFCLARSH 341
>gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 323
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 138/320 (43%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G
Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+
Sbjct: 64 EDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++
Sbjct: 124 SELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ E+ + I +E+L + I+ AL + RA KA +L L
Sbjct: 244 MEVGSPEERQLVRDAIEHRN-GMEHLDRILAILDRTGALEYSRMRAREEADKAIAALAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS K++L + +QR
Sbjct: 303 PDSRHKQALETLAHMAVQRS 322
>gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
Max13]
gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
K40]
gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 322
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVENAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALIELSEFAVARTH 322
>gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94]
gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94]
Length = 323
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 197/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ W+++L+ + +QR +
Sbjct: 302 LPDTPWREALIGLAHIAVQRDH 323
>gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
Length = 323
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 145/322 (45%), Positives = 199/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E +S + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++
Sbjct: 123 MTELRSLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 183 GLLADSPIEVQTALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G EK + I G + E++ ++ AL TE RA +KA +L
Sbjct: 243 AMANGNDTEKALIRDAIEKGDGT-EHIDVILAALKNCGALEYTEQRAIEESEKAIAALSI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +KK+L+ + QR N
Sbjct: 302 IPDSDYKKALISLAKIATQRSN 323
>gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 322
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRDAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
B728a]
gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
FF5]
gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
B728a]
gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7]
gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 322
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
Length = 323
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 138/320 (43%), Positives = 198/320 (61%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++ L DM+ VN LI +R+ SDV ++ + Y+I GGKR+RP+L + +A + Y+G
Sbjct: 4 QVIRTLADDDMQAVNQLIYQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M+
Sbjct: 64 DAHISLATIIEFIHTATLLHDDVVDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E + ++ LS +AEGE+ QL + TE++YL VI KTA LF AA ++
Sbjct: 124 VELGNMRIMQLLSEATNLIAEGEVMQLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + QAL+ YG LG AFQL+DDV+DY MGKN+G+D GKPTLP+I A
Sbjct: 184 ILANQPAHIEQALRDYGKYLGTAFQLIDDVMDYSSSSETMGKNVGDDLSEGKPTLPLIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+GT +K + I + +E L + I+++ AL T RA +KA D+L L
Sbjct: 244 MVQGTPEQKKRIEQAITERD-GMEYLDEILDILQQTHALEYTVTRAEQEARKAIDALSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS +K +L + + + R
Sbjct: 303 PDSDYKTALQALAESAVHRQ 322
>gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
sp. 3_2_53FAA]
gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
sp. 3_2_53FAA]
Length = 340
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 319 LPDTPWREALVGLAHIAVQR 338
>gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703]
gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703]
Length = 323
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L+ +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITALSAQDMAAVNQIILEQLNSDVALINQLGHYIISGGGKRIRPMIAVLAARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLSSLRVLAVMSDAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILADADTTCENALRDYGRYLGTAFQLIDDLLDYNADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G ++ + I G L M+E +L T RA KA +L+C
Sbjct: 243 AMHHGNPEQRRMIRQAIEQGN-GRHLLIPVLAAMQECGSLEYTRQRAEEEADKAIAALQC 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S +K +L + +QR
Sbjct: 302 LPRSDFKTALESLAHLAVQR 321
>gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440]
gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440]
Length = 322
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + E+ AL T A Y ++A L L
Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 340
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 153/320 (47%), Positives = 212/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L +M KVN IL+ + S V +IP + +++ SGGKRLRPMLTLATA + Y
Sbjct: 19 VDALRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLCGYT 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EFIHTATLLHDDVVD+S LRRG+ A VWGNQ SVLVGDFL S+AF +
Sbjct: 79 GERHIGLAACVEFIHTATLLHDDVVDESDLRRGQDTANAVWGNQASVLVGDFLFSRAFQL 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S + L+ LS + +AEGE+ QL + ++D TE YL VI+ KTA LF+AA ++
Sbjct: 139 MVGDGSLKVLKILSDASAIIAEGEVHQLITTNDIDTTEAAYLEVIRCKTAQLFAAAAQIG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL+ +G +LG+AFQLVDDVLDY E +GK +G+DFR GK TLPVIL
Sbjct: 199 PVVAERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAEQAALGKTVGDDFREGKVTLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+Q G E+ FWK TI D ++L +A +M ++ L + RA Y A+ +LR
Sbjct: 259 AYQAGDDPERAFWKRTIGDLDQRDDDLAEAQRLMAKHGTLEASLNRARDYADAAQAALRS 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + ++ +L E+VDFC++R
Sbjct: 319 FPANPYRAALEELVDFCVER 338
>gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
Length = 331
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 152/321 (47%), Positives = 208/321 (64%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L L DM+ VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y
Sbjct: 10 DRLATLLSGDMDGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYE 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +
Sbjct: 70 GPFHVHLAATVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV
Sbjct: 130 MVEPGNLRVLNILSNAAATIAEGEVLQLTAAQDLRTNEDIYLQVVRGKTAALFSAATEVG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAGV+ QAL YG LGIAFQ+VDD+LDY+G+ + GKN+G+DFR K TLPVI
Sbjct: 190 GVIAGVEEEQVQALFDYGDALGIAFQIVDDLLDYQGDSSATGKNVGDDFRERKLTLPVIK 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FWK TI G +L+ A ++ ++ AL T A ++ KAK S+
Sbjct: 250 AIAAADDEERAFWKRTIEKGDQQDGDLEHALALLNKHGALDATRADAQAWTDKAKASMEK 309
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S + L+E+ DF + R+
Sbjct: 310 LPQSELRDLLVELADFVVSRV 330
>gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1]
Length = 322
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + E+ AL T A Y ++A L L
Sbjct: 244 MREGTTEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H299]
gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H299]
Length = 323
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN TSVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNATSVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium
HTCC2083]
gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
HTCC2083]
Length = 333
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 145/322 (45%), Positives = 208/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 12 DAMAAYLADDLNAVNVLIQQRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ S++L TE YL V++ KTA LFSAA EV
Sbjct: 132 MVETGSMRVLDILANASATIAEGEVLQLTASQDLSTTEAIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+VDD+LD G+ +GKNIG+DFR K TLP+I
Sbjct: 192 GVIAGADEAHVKALFDYGDALGIAFQIVDDLLDMSGDAGAIGKNIGDDFREKKLTLPLIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW+ TI G+ +L+ A ++ ++ AL DT A ++ +KA ++
Sbjct: 252 AIAKADAEERAFWERTIEKGRQEDGDLETAIALLHKHGALDDTRDEALAWAEKAVKAIDY 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP ++ L ++ D+ + R+N
Sbjct: 312 LPAHPVREMLRDLADYVVARIN 333
>gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
DFL-43]
gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
DFL-43]
Length = 338
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 185/322 (57%), Positives = 238/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L D T DME+VN LIL + SDV MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 17 VKPLVDKTRGDMERVNQLILSKAGSDVAMIPEVANHLISSGGKRLRPMLTLASATMFGYS 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA ++EF+HTATLLHDDVVD+S LRRG+ AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDFHIKLATSVEFMHTATLLHDDVVDESDLRRGRSTARMIWGNQASVLVGDFLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LFSAA EV
Sbjct: 137 MVEVGSLEALDVLSTAAAVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFSAACEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + R AL+SYG+NLG+AFQL+DDVLDY G N++GKN+G+DFR GK TLPV+L
Sbjct: 197 PIIAETSKAERSALRSYGINLGLAFQLIDDVLDYGGSANDLGKNVGDDFREGKITLPVVL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG++ E+ FW+ I GK L+KA ++ + +L DT RA Y A+D+L
Sbjct: 257 AYRRGSEAERAFWREAIEGGKNDDAALEKALGLITKYGSLKDTMARAEHYASIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS K +L+EV+ FCL R N
Sbjct: 317 LPDSDEKAALLEVIAFCLNRAN 338
>gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
400]
gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
400]
Length = 323
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 202/322 (62%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 3 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEHHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E ++ + L+ L+ LAEGE+ QL + D TE +Y+ VI KTA LF AA +++
Sbjct: 123 MTELENMKVLQVLAHTTNVLAEGEVLQLMNCNDPDTTEANYMRVIYCKTAKLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A V QAL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLANVSPEQEQALADYGKYLGTAFQLTDDLLDYTANADELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ K + I + + + + + E+ ALV T+ +A + QKA D+L
Sbjct: 243 AMENGSDTAKKLIRDAIEQSDGTKA-IDEILVALEESGALVYTQEKAQAEAQKAIDALTV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
PDS +K++L+ + + R +
Sbjct: 302 FPDSDYKQALISLAHLSVNRSS 323
>gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori
str. 301020]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
Length = 323
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565]
gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565]
Length = 323
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 139/320 (43%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G
Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+
Sbjct: 64 EDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++
Sbjct: 124 AELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V QA+ YG LG AFQ++DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSEEMGKNVGDDLAEGKPTLPLLRA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT E+ + I +E+L++ I+ AL + RA KA +L L
Sbjct: 244 MEVGTPEERQLVRDAIEHRN-GMEHLEQILGILDRTGALEYSRMRAREEADKAIAALAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS K +L + +QR
Sbjct: 303 PDSPHKHALETLAHMAVQRS 322
>gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCGATVEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRKAIQKGGI--EDLEAIRAAVEASGSLEYTAQLARDYVARAIKCLEAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAEATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + E+ AL T A Y ++A L L
Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
Length = 345
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+
Sbjct: 26 IQSAYDLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQ 85
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M
Sbjct: 86 GSYHIDIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEM 145
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++
Sbjct: 146 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 205
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I
Sbjct: 206 AVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIY 265
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +G+ ++ I G ENL + + + A+ T A KA +++
Sbjct: 266 AMSKGSTSHVKVIRNAIESGGR--ENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKN 323
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S ++++L+ + F R
Sbjct: 324 IPASPYQEALLNLAKFAAYRT 344
>gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
Length = 381
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L+Y+
Sbjct: 61 LEQITELTAQDMAAVNATILEQLNSEVTLINQLGYYIISGGGKRIRPMIAVLAARALQYQ 120
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 121 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 181 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMRVIYSKTARLFEAAAQSS 240
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + Q L+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 241 AILSGATEAQEQGLQDYGRYLGTAFQLIDDLLDYSADGVTLGKNTGDDLNEGKPTLPLLH 300
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G ++ + I G L+ M + +L T RA KA +L
Sbjct: 301 AMHHGNAQQTAMIRGAIEQGN-GRHLLEPVLTAMEQCGSLSYTRQRAEEEADKAIAALHV 359
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + +QR
Sbjct: 360 LPQSPFRDALEGLAHLAVQR 379
>gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp.
BG33R]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 126/321 (39%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDF+ S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFMYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+ F A+ ++
Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMFFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G +AL+++G NLG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCGATAEQAEALRTFGDNLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRKAIQKGGI--EDLEAIRAAVEASGSLEYTAQLARDYVARAIQCLEAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 331
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 146/321 (45%), Positives = 202/321 (62%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L D+ VN LI +R+ S IP+V +L+ +GGKR+RPMLTLA A + Y
Sbjct: 10 EAIAALLADDLGAVNALIRERMASRHAPRIPEVTAHLVEAGGKRIRPMLTLAAARLCGYD 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +
Sbjct: 70 GPYHIHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L LS A T+AEGE+ QLS +++L TEE YL VI+ KTA LFSAA E
Sbjct: 130 MVEPGNLRVLSILSDAAATIAEGEVLQLSAAQDLKTTEETYLQVIRGKTAALFSAATEAG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IAG + +AL YG LGIAFQ+ DD+LD+ G+ + GKN+G+DFR K TLP+I
Sbjct: 190 GEIAGASPAQVRALFDYGDALGIAFQMADDLLDWTGKTDSTGKNVGDDFRERKLTLPLIR 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FW TI G+ + E+L A ++ + AL T A + +AK +L
Sbjct: 250 AVAAADDEERAFWTRTIEKGRQNDEDLATARELLDRHGALGSTRETALDWADRAKSALTH 309
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD L ++ D+ ++RL
Sbjct: 310 LPDHDLTAHLSDLADYVVERL 330
>gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253]
gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227]
Length = 323
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 199/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG Q L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMRHGTPEQAQMIRNAIEHGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIKALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ W+++L+ + +QR +
Sbjct: 302 LPDTPWREALIGLAHIAVQRDH 323
>gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDTL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae
642]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMDVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNASEAQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 143/321 (44%), Positives = 199/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D D +VN LI++R+ SDV M+ + +Y+I SGGKRLRP+L L + Y
Sbjct: 4 QRIYDTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIESGGKRLRPLLVLLASRATGYNE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DNH+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+
Sbjct: 64 DNHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E +S ++ LS +AEGE+ QL KN D+TE Y+ VI +KTA+LF A+ +
Sbjct: 124 VELESLPIMKVLSHATAVIAEGEVMQLMNVKNPDLTENQYMQVIHNKTAMLFEASSHSGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG ++ +ALK+YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GK TLP+I A
Sbjct: 184 LLAGANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAETMGKNVGDDLAEGKTTLPLIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
EK + I G + +L+ I+ AL +A + Q+AKD L+ L
Sbjct: 244 IANSNDDEKKLIRRAIRKGGLD--DLQPVLAIINTTGALNYAMDKAKNQAQQAKDCLQSL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S +L + D + R++
Sbjct: 302 PASEHLDALHLLTDIAVARIS 322
>gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
Length = 332
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 207/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 DRMAAYLNADMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYD 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ET + L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V
Sbjct: 131 MTETNNMRVLAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA ++ QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI
Sbjct: 191 GVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +G E+ FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L
Sbjct: 251 AIAKGDATERAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNT 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L ++ D+ + R++
Sbjct: 311 LPDHELTQMLRDLADYVVARIS 332
>gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1]
Length = 322
Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + E+ AL T A Y ++A L L
Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALHYTAELARDYVKRAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
Length = 370
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 109
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 110 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 170 MTSLGSLKVLEVMSKAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 230 GILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 289
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M +L T RA KA +L+
Sbjct: 290 AMRHGTPEQALMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 348
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 349 LPDTPWREALIGLAHIAVQR 368
>gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
35316]
gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
35316]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LDKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILGGCTDVQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M + +L T RA KA +L+
Sbjct: 243 AMRNGTPEQAKMIREAIEQGN-GRHLLEPVLEAMAISGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+PDS W+ +L+ + +QR
Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321
>gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
W3110]
gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A]
gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638]
gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11]
gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B]
gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
11128]
gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
CB9615]
gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736]
gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H736]
gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M605]
gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M718]
gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA271]
gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H591]
gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655]
gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr.
W3110]
gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A]
gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638]
gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11]
gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
11128]
gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1]
gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15]
gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017]
gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042]
gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
CB9615]
gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407]
gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str.
2457T]
gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W]
gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1]
gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431]
gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112]
gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905]
gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83]
gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327]
gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B]
gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA
5905]
gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14]
gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G]
gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68]
gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180]
gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357]
gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1]
gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11]
gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520]
gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482]
gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120]
gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007]
gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509]
gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167]
gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86]
gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H736]
gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M605]
gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M718]
gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA271]
gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H591]
gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82]
gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74]
gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74]
gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88]
gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70]
gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671]
gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71]
gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71]
gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6]
gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272]
gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218]
gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304]
gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933]
gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4113]
gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4401]
gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4501]
gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4486]
gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4196]
gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4076]
gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC869]
gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC508]
gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
EC4024]
gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4115]
gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK966]
gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
EDL933]
gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4196]
gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4113]
gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4076]
gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4401]
gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4486]
gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4501]
gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC869]
gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC508]
gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4115]
gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC1212]
gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
G5101]
gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str.
493-89]
gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H
2687]
gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
LSU-61]
gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
1125]
gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
1044]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G LK M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
Length = 336
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 176/322 (54%), Positives = 228/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYA 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PAIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDSERAFWIKALERGEITEADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336
>gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
Length = 321
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/321 (41%), Positives = 196/321 (61%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + +DM V+ +I R+ S+V +I + +Y+I +GGKR+RP + L + L Y
Sbjct: 3 IKAIFQPISEDMSAVDKVIRSRLNSEVVLIRTIGEYIISAGGKRIRPAMLLMMSKALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H L+A IEFIHT+TLLHDDVVD+S +RRG A V+GN SVLVGD+L S++F M
Sbjct: 63 GSLHHLMAAVIEFIHTSTLLHDDVVDESDMRRGSATANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ +S +AEGE+ QL + +V + Y+ VIKSKTA LF AA V+
Sbjct: 123 MVEADSMRIMQIMSEATTVIAEGEVLQLLNVHDPNVDFDRYMDVIKSKTAKLFEAATRVA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG ++V Q YG ++G AFQ++DDVLDY G ++GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGADDAVEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
GT +K + I +G + ++ +R AL T A A +L
Sbjct: 243 VMSVGTPEQKALIRHAIEEG---DADFERVAQAIRSTDALDYTRNIAQEQANIALSALDG 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS++KKSL ++V+F L R
Sbjct: 300 LPDSAYKKSLQDLVNFSLART 320
>gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863]
gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5]
gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKNIG+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNIGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNIIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 370
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 109
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 110 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 170 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 230 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 289
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 290 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 348
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 349 LPDTPWREALIGLAHIAVQR 368
>gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS]
gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVISEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073]
gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALVSLAHIAVQR 321
>gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
Length = 332
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 207/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 DRMAAYLNADMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYD 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ET + L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V
Sbjct: 131 MTETNNMRVLAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA ++ QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI
Sbjct: 191 GVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +G E+ FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L
Sbjct: 251 AIAKGDAAERAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNT 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L ++ D+ + R++
Sbjct: 311 LPDHDLTQMLRDLADYVVARIS 332
>gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 335
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 129/324 (39%), Positives = 196/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 11 LEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYR 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 71 GKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 131 MTDLDSLRVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++
Sbjct: 191 AIVADASEEIETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLH 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKA---FIIMRENRALVDTEYRAYSYGQKAKDS 297
A K K I + + L++ IM+E+++L +A QKA DS
Sbjct: 251 AMHAADKAGKTTQAELIRNAIENGGELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVDS 310
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S +K++L+ + + R
Sbjct: 311 LGVLPESEYKQALVSLAYLSVDRS 334
>gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
Length = 323
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 192/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKITELTAQDMADVNAKILHQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S LE +S +AEGE+ QL + D++EE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLQSLRILELMSAATNVIAEGEVMQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAGADTHQELALQDYGRYLGTAFQLIDDLLDYDADGATLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ + I G L M++ +L T RA KA +L
Sbjct: 243 AMRHGSPERSAMIRQAIEQGN-GRHLLDPVLETMQQVGSLDYTRRRAEEEADKAIAALAV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L DS +K++L+ + + + R
Sbjct: 302 LDDSPYKQALIGLANLSVNRT 322
>gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
Length = 333
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 193/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y
Sbjct: 13 LNAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVNYN 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 73 GEGHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L+ L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 133 MTELGSMKVLQVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG V +AL YG LG AFQL+DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 193 AVLAGSDEKVEEALADYGKYLGTAFQLIDDLLDYTSDAEELGKNIGDDLAEGKPTLPLIY 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G +RE+ ++ I + +++ + AL T RA KA +L
Sbjct: 253 AIGHGNEREQGLIRNAIEKADGT-GAIEEILTALHRCGALDYTRRRAEEEADKAIAALSV 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ +K +L + + R N
Sbjct: 312 LPEGDFKTALESLARIAVSRSN 333
>gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155]
gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185]
gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195]
gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155]
gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185]
gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195]
gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678]
Length = 331
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 139/322 (43%), Positives = 195/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I
Sbjct: 191 GVLAGATPEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT EK+ + I G + + K + AL T+ +A +KA ++L
Sbjct: 251 AIAHGTDEEKHLIRQAIEQGDGTQA-IDKIVAALHHCGALNYTQQKAIEESEKAIEALSI 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K++L+ + + R +
Sbjct: 310 LPDSDYKQALVALAKISVDRNH 331
>gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC
27126]
Length = 324
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 188/322 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A +
Sbjct: 3 IDQIRALSNDDMQAVNQLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGID 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++H LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M
Sbjct: 63 NNDHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ K +E LS +AEGE+ QL + TE Y VI KTA LF AA +++
Sbjct: 123 MVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDPSTTEARYFDVIYGKTARLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++
Sbjct: 183 AVLTDQNEHIEHAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + +L + IM E AL T A Q A +SL
Sbjct: 243 AMWHARNDDDKALIQEAIEQSNGLPHLTRIQGIMEETGALDYTRECAQKEVQMAINSLNA 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS +K++L+ + ++R +
Sbjct: 303 IEDSEYKEALIALAHISIERTS 324
>gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
Length = 323
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 195/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DM+ V+ LI +++ SDV +I + Y+I SGGKRLRP+LT+ + Y
Sbjct: 3 LNAIRELAETDMKAVDQLIYQQLESDVALINQLAFYIIKSGGKRLRPLLTVLACRAMGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GDKHLKLAAIVEFIHTASLLHDDVVDESLLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ L+ LAEGE+ QL + + TE +Y+ VI KTA LF AA ++
Sbjct: 123 MTELDSLHVLKVLANTTNVLAEGEVLQLMNCNDPNTTEANYMRVIYCKTAKLFEAATLLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + + AL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLAGASVAEQIALGEYGKFLGTAFQLTDDLLDYTASSDELGKNIGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ K K I G + + + + ++ AL T+ +A +KA +L C
Sbjct: 243 AMEHGSAHAKALIKQAIEQGDGTQA-IDEIVKALHDSGALEYTKNKAIEEAEKAIAALSC 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS K +L+ + + + R N
Sbjct: 302 VKDSRHKDALISLANIAVNRSN 323
>gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163]
Length = 323
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y
Sbjct: 3 LEQITKLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + ++ I +G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHHGNAEQSSLIRNAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQR 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ ++ +L + +QR
Sbjct: 302 LPETPYRVALEGLAHLAVQR 321
>gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
Length = 322
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 138/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM V+ LI +R+ SDV +I + Y+I SGGKRLRP + + +A Y
Sbjct: 3 IQSIYSLIEDDMTAVDNLIQQRLQSDVALINQLGFYIINSGGKRLRPAIAILSAKACGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA IEFIHTATLLHDDVVD+SA+RRGK A +WGN+ SVLVGDFL +++F M
Sbjct: 63 GDKHINLATIIEFIHTATLLHDDVVDNSAMRRGKETANNLWGNEASVLVGDFLYTRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + LS +AEGE+ QL + D TE YL VI KTA LF AA ++
Sbjct: 123 MVEMDSMRLMRILSSTTNIIAEGEVLQLLNCHDADTTEARYLEVIHHKTAKLFEAAGQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ + + QA+ Y M+LG AFQLVDD+LDY +GKNIG+D GKPTLP+I
Sbjct: 183 AVISRSADDIEQAMARYAMHLGSAFQLVDDLLDYSQSSETIGKNIGDDLAEGKPTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++GT ++ + I G+ + + I+ E A+ T + A AK +L
Sbjct: 243 AMRQGTDQQAAIIREAIEQGQRD--RIDEIITIINETGAIDYTAHAAAQEVAHAKQALAT 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ +K++L+ + DF + R
Sbjct: 301 LPETDYKQALLSLADFSISR 320
>gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
Length = 322
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 196/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DM+ V+ +I R+ SDV +I + +Y++ SGGKRLRP L L A L+YR
Sbjct: 3 VQQLFAPIAADMQAVDTVIRNRLHSDVALIRRIAEYIVGSGGKRLRPALVLYAAGALDYR 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA +EFIHTA+LLHDDVVD+S LRRGK A +GN ++VLVGDFL S+AF M
Sbjct: 63 GVHHHELAAVVEFIHTASLLHDDVVDESDLRRGKRTANAAFGNASAVLVGDFLYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA +
Sbjct: 123 MVGVDEMRVMRVLADATNIIAEGEVLQLLNCHNADVVIEDYLRVIRYKTAKLFEAAARLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG +++ Q L ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I
Sbjct: 183 GIVAGADDALEQRLAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q GT + + I G + ++ AL +T A + + A D++
Sbjct: 243 VMQHGTAEQGALVRHAIEGGGR--GDFAAVLAAIQSTGALEETRRYAEAEAKLAIDAISV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +K++L+++ DF ++R +
Sbjct: 301 LPPSIFKEALLQLSDFAVRRKH 322
>gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
Length = 336
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 148/322 (45%), Positives = 215/322 (66%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++L + ++E VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 15 ELLAETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 75 GDHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV
Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLRTTEEIYLQVVRGKTAALFSAATEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA ++ +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI
Sbjct: 195 GVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW+ TI G+ +L A +M + L T A+ + +KAK +L
Sbjct: 255 AIAQATDEERAFWQRTIAKGRQEEGDLDHALELMAKYATLDATRADAFGWAEKAKSALAE 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L+++ D+ + RLN
Sbjct: 315 LPDHPIRTMLIDLADYVVSRLN 336
>gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14]
gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14]
Length = 336
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 177/322 (54%), Positives = 226/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQIVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLAGYS 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M
Sbjct: 75 GEGHIKLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + A S+GMNLGIAFQLVDDVLDY G+ ++GKNIG+DFR GK TLPV+L
Sbjct: 195 PVLGGRPKAEEMAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNIGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + G+I +L A +M ++RAL DT RA YG A D+L
Sbjct: 255 AFRRGNDIEREFWVRALEQGEIGDNDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPPSPMKSALEQVVAFCLARSH 336
>gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 322
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 198/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ +EE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTSEEVYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAGATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ + + + AL T A Y ++A + L L
Sbjct: 244 MREGTPEQAALVRKAIQKGGL--EDLEQIRVAVEASGALDYTAQLARDYVKRAIECLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASQYRDALVELSEFAVARTH 322
>gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 323
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 137/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G
Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+
Sbjct: 64 QDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + +E LS T+AEGE+ QL + D TE+ Y+ VI KTA LF AA +++
Sbjct: 124 SELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEQSYMTVIYCKTAKLFEAATRLAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A
Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ E+ + I +E+L + I+ AL + RA KA +L L
Sbjct: 244 MEVGSPEERQLVRDAIEHRN-GMEHLDQILGILDRTGALEYSRMRAREEADKAIAALAIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS K++L + +QR
Sbjct: 303 PDSQHKQALETLAQMAVQRS 322
>gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae]
Length = 323
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 140/322 (43%), Positives = 198/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT KDME VN IL ++ SDV +I + Y+I GGK++RPM+ + L Y
Sbjct: 3 LESIINLTAKDMEAVNKAILNQLNSDVHLINQLGHYIISGGGKKIRPMIAILVGRALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S LRRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GKKHINVAALIEFIHTATLLHDDVVDESTLRRGKKTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ +S +AEGE+ QL N D+TE Y+ +I SKTA LF AA S
Sbjct: 123 MTELDSMPILKLMSDATNVIAEGEVSQLINCNNPDITESTYMQIIYSKTARLFEAATHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + +QAL+ YG LG AFQL+DD+LDY + +GKNIG+D GK TLP++
Sbjct: 183 AIVSGANETQQQALRDYGRYLGTAFQLIDDLLDYDADSTTIGKNIGDDLDEGKLTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++GT E +++I G L I M+ +L T RA KA +L
Sbjct: 243 AMKKGTAEESALIRNSIEKGN-GRHLLSAILITMKRCGSLEYTRDRAREEADKAIKALDI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+S+K +L+ + +QRL+
Sbjct: 302 LPDTSYKDALISLACISVQRLS 323
>gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 323
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y
Sbjct: 3 LEQITTLTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + + I +G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHNGNAEQSSLIRKAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ ++ +L + +QR
Sbjct: 302 LPETPYRIALEGLAHLAVQR 321
>gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 332
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 213/322 (66%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ML ++M VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y+
Sbjct: 11 EMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQ 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GEDHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ A T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV
Sbjct: 131 MVETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAGV + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI GK + +L++A +M + L T A+++ +KA+ +L
Sbjct: 251 AVAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALEL 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ + L ++ D+ + RL+
Sbjct: 311 LPNHEIRTMLSDLADYVVARLS 332
>gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 323
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 192/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I +G L+ + M++ +L T RA KA +L+
Sbjct: 243 AMHNGTPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S ++ +L + +QR
Sbjct: 302 LPESDYRLALEGLAHIAVQRS 322
>gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
Length = 498
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 358 GILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M +L T RA KA +L+
Sbjct: 418 AMRHGTPEQAQMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 476
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 477 LPDTPWREALIGLAHIAVQR 496
>gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536]
gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88]
gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a]
gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA206]
gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536]
gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88]
gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a]
gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034]
gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972]
gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146]
gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1]
gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252]
gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263]
gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1]
gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA206]
Length = 323
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALVGLAHIAVQR 321
>gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
Length = 338
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 182/322 (56%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGTK E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L
Sbjct: 257 AYRRGTKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L ++ K +L++V+DFC+ R+N
Sbjct: 317 LEETRQKSALIDVIDFCISRVN 338
>gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum
brasilense]
Length = 338
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 156/320 (48%), Positives = 221/320 (69%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L D+ VN +I++R+ S V+MIP + YLI +GGKRLRP+LTLA A + Y+
Sbjct: 17 LDDLTALVADDLSAVNEIIVQRMHSSVDMIPQLAGYLIAAGGKRLRPVLTLAAAELCGYK 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H +LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S++F +
Sbjct: 77 GEDHKMLAAVVEFIHTATLLHDDVVDESDLRRGLASANAVFGNKASVLVGDFLFSRSFEL 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L LS + +AEGE+ QL + + + +E+ YL VIK+KTA LF+AA V
Sbjct: 137 MVEVGSLDVLRILSKASAVIAEGEVLQLRTTNDTETSEQAYLEVIKAKTAELFAAACRVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL YGMNLGIAFQLVDDVLDY + ++GK +G+DFR GK TLPV+L
Sbjct: 197 AVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAKLGKTVGDDFREGKITLPVVL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW+ T+ + +L++A +M ++ AL DT RA YG A+D+L
Sbjct: 257 AFRRGNDEERAFWRRTMEELDQQEGDLERAQELMAKHNALKDTVERARHYGSIARDALGL 316
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD+ K +L+EV+DF ++R
Sbjct: 317 FPDTPVKAALLEVLDFVIER 336
>gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218]
Length = 396
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G
Sbjct: 77 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAVLSAKALGYQG 136
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H L A IEF HTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 137 QGHTLAAAFIEFTHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMM 196
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +
Sbjct: 197 VELGSMKILQLMSEAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 256
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 257 ILADASPEIETALQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 316
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G + + I + L + M+E +L T +A KA L L
Sbjct: 317 MRHGNAEQAAMIREAIEQAN-GMARLDEILAAMKETGSLEYTVAKANEEADKAITELAIL 375
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P+S +K++L+ + + R
Sbjct: 376 PESDYKQALIALAHMAVNR 394
>gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 200/320 (62%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG ++ + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMRHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQT 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 337
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 156/320 (48%), Positives = 213/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++
Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++
Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL
Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL
Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLEA 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD + K++L+E V+F + R
Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335
>gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223]
gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223]
Length = 331
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 139/322 (43%), Positives = 195/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I
Sbjct: 191 GVLAGATLEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT EK+ + I G + + K + AL T+ +A +KA ++L
Sbjct: 251 AIAHGTDEEKHLIRQAIEQGDGTQA-IDKIVAALHHCGALNYTQQKAIEESEKAIEALSI 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K++L+ + + R +
Sbjct: 310 LPDSDYKQALVALAKISVDRNH 331
>gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
D2]
gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
D2]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 199/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ LT DM++VN LI K++ SDV ++ + Y++ SGGKR+RPML++ +A L Y
Sbjct: 3 IKSIQALTDNDMQRVNQLIYKQLQSDVALVNQLGLYIVSSGGKRVRPMLSILSAKALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF +
Sbjct: 63 GDAHITLAAIVEFIHTATLLHDDVVDESDLRRGNATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ L+ +AEGE+ QL + D TE+ Y+ VI SKTA LF AA +++
Sbjct: 123 MVGLEEMRVMKILADATNVIAEGEVLQLMNCNDPDTTEQSYMQVIYSKTAKLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I + + LK YGM+LG AFQLVDDVLDY + E+GK++G+D GKPTLP+I
Sbjct: 183 AVITRKDAATEEQLKLYGMHLGTAFQLVDDVLDYSADQAELGKSLGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q GTK + + I G L + + AL T +A Q+A L
Sbjct: 243 AMQHGTKEQVALIRQVIEQGN-GRAFLDDVLKALADTDALNFTLNKAKEESQRAIACLAL 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K++L+ + + R +
Sbjct: 302 LPDSEYKEALIGLARLAVDRTH 323
>gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVQEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
Length = 320
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 142/321 (44%), Positives = 199/321 (61%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + + D VN LI+ ++ SDV ++ ++ YL+ +GGKRLRP+L + A L Y
Sbjct: 1 MLPFQQVVKDDFAAVNQLIIDQLHSDVGLVENIGHYLVEAGGKRLRPLLVMLAAKSLGYT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA IEFIHTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M
Sbjct: 61 GKQHLDLAAIIEFIHTATLLHDDVVDMSQLRRGRPTANAQWGNAPSVLVGDFLYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S + + LS T+AEGE++QL +K+ +VTEE+Y VI KTA+LFSAA EV
Sbjct: 121 MVAIGSMDVMAILSDTTNTIAEGEVQQLVNAKDPNVTEENYFQVIDKKTAILFSAACEVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG R+AL+ YG ++GIAFQLVDD LDY G+ +GKN+G+D GKPTLP+I
Sbjct: 181 GVIAGANTRQREALRHYGSHVGIAFQLVDDALDYTGDAATLGKNVGDDLAEGKPTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT+ + +TI G S L +++ + T A +A L+
Sbjct: 241 AMRTGTRAQAELVANTIRTGDAS--QLHAILEVVKATGGMDYTLQAARRQVDQALSQLQT 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+++ +++ ++ +F L R
Sbjct: 299 LPDNAYSQAMRQLAEFSLART 319
>gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915
[Aromatoleum aromaticum EbN1]
Length = 322
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 135/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L DM+ V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A + YRG
Sbjct: 4 QQLYAPIATDMQAVDAVIRERLHSDVVLIRQVAEYIIHSGGKRLRPALVLFSAGAMGYRG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+H LA +EFIHTATLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M+
Sbjct: 64 QSHHQLAAVVEFIHTATLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++ L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + +
Sbjct: 124 VGVGDMRVMQVLADATNIIAEGEVLQLLNCHNADVDIEDYLRVIRYKTAKLFEAATRLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + + ++GM+LG AFQ++DDVLDY + GK++G+D GKPTLP+I A
Sbjct: 184 ILGGANEEQERKVAAFGMHLGTAFQIIDDVLDYSSDEAATGKHLGDDLAEGKPTLPLIHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + ++ I G + + +RE AL + A + GQ A D+L L
Sbjct: 244 MKHGTAEQSARVRNAIESGGRD--DFEAVLAAIRETGALEEARRWARAEGQFAIDALEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S +K +L+++ DF + R
Sbjct: 302 PPSIFKDALLQLSDFAVVR 320
>gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82]
gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG
857C]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNVHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALVGLAHIAVQR 321
>gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 322
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+
Sbjct: 3 IQSAYDLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M
Sbjct: 63 GSYHIDIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++
Sbjct: 123 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I
Sbjct: 183 AVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +G+ ++ I G ENL + + + A+ T A KA +++
Sbjct: 243 AMSKGSTSHVKVIRNAIESGGR--ENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKN 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S ++++L+ + F R
Sbjct: 301 IPASPYQEALLNLAKFAAYRT 321
>gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
Length = 323
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAIGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 498
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 237
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 238 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 358 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLGKNVGDDLNEGKPTLPLLH 417
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L M +L T RA KA +L+
Sbjct: 418 AMRHGTPEQSTMIRTAIEQGN-GRHLLDPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 476
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 477 LPDTPWREALIGLAHIAVQR 496
>gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
Length = 338
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 165/322 (51%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +LT DME +N LI+ S+VEMIP++ +LI SGGKR+RPM+TLA A M Y+
Sbjct: 17 LHPLLNLTKGDMESINQLIISMAKSNVEMIPEISNHLISSGGKRIRPMITLAAAHMFGYQ 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDKHIKLATAVEFMHTATLLHDDVVDESELRRGKSTARMIWGNQASVLVGDFLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ A +AEGE+ QLS +KN++ +YL +I +KTA LFSAA EV
Sbjct: 137 MVDVGSLEALSVLANAAAIIAEGEVMQLSAAKNIETNVSNYLKIINAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL
Sbjct: 197 PIIAGYGHEERSALHQYGLSLGVAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ R EK FWK + + + E LK A ++ + L+DT +A YG++A D+L
Sbjct: 257 SYTRSNDIEKTFWKQALENNHNNDEALKHAQQLIEKYDGLIDTIEQARIYGKRAIDALSS 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ ++ K +L++++DFC++R+N
Sbjct: 317 IKENPAKNALIDIIDFCIERVN 338
>gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
Length = 336
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 175/322 (54%), Positives = 228/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y
Sbjct: 15 IDQLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPILTLAMANLTGYA 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PTIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDAERAFWIKALERGEITETDLDQAIALMAKHRALEDTIQRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336
>gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 192/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ L++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILSDATPEQELTLQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I +G L+ + M++ +L T RA KA +L+
Sbjct: 243 AMRNGTSEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S ++ +L + +QR
Sbjct: 302 LPESEYRLALEGLAHIAVQRS 322
>gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L ++ +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMAAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ + M++ +L T RA KA SL+
Sbjct: 243 AMHNGTPEQTAMIRQAIEQGN-GRHLLEPVLLAMQQCGSLDYTRQRAEEEADKAIASLQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS ++++L + +QR
Sbjct: 302 LPDSDYRQALEGLAHIAVQRS 322
>gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+AG ++ + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSDGETLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ + + I +G L+ M + +L T RA KA +L
Sbjct: 243 AMRHGSAAQSAMIRQAIEEGN-GRHLLEPVLEAMADCGSLEWTRQRAEEEADKAIAALSV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALISLAHIAVQR 321
>gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y
Sbjct: 3 LEQITALTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + + + I +G L+ M++ +L T RA KA +L+
Sbjct: 243 AMRHGNAEQSSLIRKAIEEGN-GRHLLEPVLSAMQQCGSLDYTRQRAEEEADKAISALQQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ ++ +L + +QR
Sbjct: 302 LPETPYRMALEGLAHLAVQR 321
>gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 135/322 (41%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y
Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAVDYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S E LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 123 MTELGSMEVLEVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A ++ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLADSPKEIQVALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G++ E+ ++ I G + + + AL T RA +KA +L
Sbjct: 243 AIAHGSETEQTLIRTAIEKGDGTDS-IDPILAALDNCGALEYTYKRAQEEAEKAIGALSI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K++L+ + + R +
Sbjct: 302 LPESDYKQALISLAKIAVARNH 323
>gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 337
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 156/320 (48%), Positives = 214/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++
Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++
Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL
Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+
Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD + K++L+E V+F + R
Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335
>gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1]
gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1]
Length = 338
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 172/322 (53%), Positives = 234/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L LT DM +VN LIL + SDVE+IP + ++LI SGGKRLRPM+TLA A M Y
Sbjct: 17 IERLIGLTKDDMARVNDLILSKAGSDVELIPQLARHLISSGGKRLRPMITLAAAQMFGYS 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR +WGNQ SVLVGD+LL QAF M
Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESDMRRGKKTARTIWGNQASVLVGDYLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL+ LS A +AEGE+ QL +SKNL+ TE++YL VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLEALDVLSSAASIIAEGEVMQLGVSKNLETTEDEYLSVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + R AL+S+G+NLG+AFQLVDD LDY G ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIIAEASRNDRAALRSFGINLGLAFQLVDDALDYGGSSRDLGKNVGDDFREGKVTLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RG++ E+ FWK I + + + L KA +M + ++ DT RA +G+ A+D+L
Sbjct: 257 SYRRGSEEERLFWKRAIEENQNDDDALAKAIGLMNRHGSIGDTIARARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + K +L +V+DFC+ R++
Sbjct: 317 LKSTPQKAALFDVIDFCISRVS 338
>gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
Length = 322
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCGASAEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRKAIQKGGI--EDLESIRAAVEASGSLDYTAQLARDYVARAIKCLEAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568]
gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568]
Length = 323
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITELTAQDMAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ + +AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++
Sbjct: 183 AILSDASVAEEKALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +K + I G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHNSEGEQKAMIRGAIEQGN-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S + +L + +QR
Sbjct: 302 LPESPHRSALEGLAHLAVQR 321
>gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
Length = 334
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 150/322 (46%), Positives = 205/322 (63%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DM+ V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 13 DQMAAYLADDMQAVSALIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYG 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F +
Sbjct: 73 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + LS A T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV
Sbjct: 133 MTEPGSMPVMRILSNAAATIAEGEVLQLTAAQNLATDEAVYLQVVRGKTAALFSAATEVG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 193 GVIAGASTDQVKALYDYGDALGIAFQIVDDLLDYQGDTGATGKNVGDDFRERKLTLPVIK 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW TI GK +L +A I+ ++ L T+ A+ + +KAK +L
Sbjct: 253 AVAKADAEERAFWVRTIEKGKQEDGDLDQALSILNKHATLAATQRDAHGWAEKAKAALAP 312
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K L+++ D+ + R++
Sbjct: 313 LPDHDLKDMLIDLADYVVSRIS 334
>gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
Length = 322
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEIYMDVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I A
Sbjct: 184 ALAGASDEQREALRTFGDHLGVAFQLVDDLLDYKGDSETLGKNVGDDLAEGKPTLPLIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L++ I + + AL T A Y +A L L
Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRIAVEASGALAYTAQMARDYVARAIACLEVL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 322
Score = 182 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ L+E+ +F + R +
Sbjct: 302 PPSEYRDVLVELSEFAVARTH 322
>gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1]
gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1]
Length = 341
Score = 182 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 210/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM VN +IL R+ SDV +IP++ +LI GGKR+RPMLTLA A +L+Y
Sbjct: 20 LDPIMALVAADMNAVNSVILARMQSDVPLIPELAGHLIAGGGKRMRPMLTLACAKLLDYA 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H LA +EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +
Sbjct: 80 GERHHKLAATVEFIHTATLLHDDVVDQSGLRRGRSTANMIWGNAASVLVGDFLFSRSFEL 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L LS + +AEGE+ QL+ + ++ +EE YL +I +KTAVLF+AA ++
Sbjct: 140 MVEDGSLRVLRILSNASAVIAEGEVNQLTAQRRIETSEERYLEIIAAKTAVLFAAACRIA 199
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +V +AL YG LGIAFQLVDDV+DY + MGK+ G+DFR+GK TLPVIL
Sbjct: 200 AVVAEREPAVEEALDQYGRYLGIAFQLVDDVIDYVSDGATMGKDAGDDFRDGKVTLPVIL 259
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ R +++F + I + E+L +A I+R AL DT RA Y Q+A D+L
Sbjct: 260 AYARAEAADRDFLREAIEGLRNEDEDLVRATGILRGTGALADTAARARHYAQRAIDALAS 319
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + +L+E F + R
Sbjct: 320 FPAGQARSALIEAAQFAVSR 339
>gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
Length = 341
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 145/321 (45%), Positives = 203/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y
Sbjct: 12 DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYG 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPFHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +T + +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV
Sbjct: 132 MTDTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+I G QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI
Sbjct: 192 GIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FWK I G +L+ A +M ++ L T A + A+ +L
Sbjct: 252 AVALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAK 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD ++ L ++ D+ ++R+
Sbjct: 312 LPDHPLRQMLDDLADYVVERV 332
>gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus]
gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
Length = 333
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 145/321 (45%), Positives = 203/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y
Sbjct: 12 DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYG 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPFHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +T + +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV
Sbjct: 132 MTDTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+I G QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI
Sbjct: 192 GIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FWK I G +L+ A +M ++ L T A + A+ +L
Sbjct: 252 AVALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAK 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD ++ L ++ D+ ++R+
Sbjct: 312 LPDHPLRQMLDDLADYVVERV 332
>gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602]
gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602]
Length = 323
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + DLT DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQIIDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHIKVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + +S L ++ +AEGE++QL + D+TE Y+ VI SKTA LF AA + S
Sbjct: 123 MTDLESLPVLALMAKAVNVIAEGEVQQLINCNDPDITEASYMQVIYSKTARLFEAASQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG N AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDADGETLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G + + I +G L+ M + +L T RA KA +L+
Sbjct: 243 AMQHGDAEQSAMIRKAIEEGN-GRHLLEPVLAAMHQWGSLAYTRQRAEEEADKAIQALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + ++R
Sbjct: 302 LPESEYRSALEGLAHMSVKR 321
>gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
Length = 346
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 192/322 (59%), Positives = 247/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR
Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 85 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 204
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 205 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L
Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAIHYGTIARDALAP 324
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK +LMEV+DFC++R+N
Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346
>gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
Length = 322
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 195/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L + L ++G
Sbjct: 4 QPFYQVVADDFAAVDGIIRKQLTSRVPLVEKIGDYITSAGGKRLRPLLVLLSGSALGHQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LLA IEF+HT+TLLHDDVVD S +RRG+ A +WGN SVLVGDFL +++F M+
Sbjct: 64 EQLRLLAAIIEFLHTSTLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELDSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEEIYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG R+AL+++G +LGIAFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 TLAGASEQQREALRTFGDHLGIAFQLVDDLLDYQGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G + E+L+ + + AL T A Y ++A L +
Sbjct: 244 MREGTAEQAALVRKAIQKGGL--EDLESIRSAVEASGALDYTAKLARDYAERAIACLEVI 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P + ++ +L+++ F + R +
Sbjct: 302 PANQYRDALVQLCRFAVARTH 322
>gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146]
gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 323
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITELTAQDMADVNAKILHQLNSDVALINQLGYYIISGGGKRIRPMIAILAARTLGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDHHLTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAGADPAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G+ + I G L+ M++ +L T RA KA +L
Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLELVLETMQQAGSLDYTRSRAEEEADKAIAALTL 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS K++L+ + + + R
Sbjct: 302 LPDSPHKQALIGLANLAVNRS 322
>gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
Length = 322
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMRILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAGATEEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRQAIQKGGI--EDLESIRAAVEASGSLDYTAQLARDYVARAITCLEAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PPSEYRDALVELSEFAVARTH 322
>gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 323
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
25259]
gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
25259]
Length = 343
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 139/321 (43%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L+ DM V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A YR
Sbjct: 24 LESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINSGGKRLRPALVLLSAGCFGYR 83
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M
Sbjct: 84 GQAHHELAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRAFQM 143
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E + LS T+AEGE+ QL + D+ EE+YL VI+ KTA LF AA +
Sbjct: 144 MVGVDNMEVMRILSDATNTIAEGEVLQLLNCHDPDIDEENYLRVIRYKTAKLFEAAGRLG 203
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + + AL YGM+LG AFQL+DDVLDY G+ + GKNIG+D GKPTLP++
Sbjct: 204 AVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLKTGKNIGDDLAEGKPTLPLLY 263
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ + + I G ++ + +++ AL T A Q A ++
Sbjct: 264 AMKHGSAAQAASIRHAIEHGGLT--EFQSVLAAIKDTNALQYTREVAQREVQTANAAISR 321
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS+ K +L+++ F ++R
Sbjct: 322 LPDSNSKTALLQLAAFAVERS 342
>gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
Length = 322
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 138/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +DL +M+ VN LI++R+ SDV +I + Y+I SGGKRLRP L + A Y+
Sbjct: 3 IDQAQDLIGGEMKAVNALIVERLKSDVALINQLGHYIIQSGGKRLRPQLAVLAARAAGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ +A IEFIHTATLLHDDVVD S LRRG+ A V+GN+ +VLVGDFL S++F M
Sbjct: 63 GEDHLQIAAIIEFIHTATLLHDDVVDASELRRGRETANAVFGNEAAVLVGDFLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + LS +AEGE+ QL + D TE YL VI SKTA LF AA +
Sbjct: 123 MVELDSMRIMSILSRATNVIAEGEVMQLLNIHDADTTEARYLEVIHSKTAKLFEAATRIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G+ QAL YGM+LG AFQL+DDVLDY + + MGKN+G+D GKPTLP+I
Sbjct: 183 AVLSGLPQEKEQALADYGMHLGTAFQLIDDVLDYSADADAMGKNVGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G++ E + I +G + + ++ AL T A A ++ C
Sbjct: 243 AMREGSEDEAALIRRAIENGGLD--EIDAVLAAIQSTGALEFTRRAAQREADAAVAAVGC 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS ++++L+ + F + R
Sbjct: 301 LPDSEYRQALIALAQFSVDR 320
>gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1]
gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
Length = 322
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDMRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAGATAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ I + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRQAIQKGGI--EDLESIRIAVEASGSLEYTAQLARDYVARAIKCLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 337
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 156/320 (48%), Positives = 214/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++
Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++
Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL
Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+
Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD + K++L+E V+F + R
Sbjct: 316 FPDGAVKEALVEAVEFTIAR 335
>gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b]
gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 323
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A L Y+
Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GSQHITNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + L +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG +G AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAEATPAQEKALQDYGRYIGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I +G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRRAIEEGN-GRHLLEPVLEAMQQCGSLAWTRQRAEEEADKAIAALKI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ W+ +L + +QR
Sbjct: 302 LPETPWRSALEALAHMSVQR 321
>gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
Length = 323
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 198/322 (61%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + DL + + N +I+ R+ SDV ++ V Y++ +GGKRLRPML L A L Y+
Sbjct: 4 LDEIRDLVADEFDTTNQIIIDRLQSDVVLVNQVGHYIVAAGGKRLRPMLLLLAAKSLNYQ 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IE IHTATLLHDDVVD+S LRRG+ A ++GNQ SVLVGD+L S++F M
Sbjct: 64 GKFHPNLAAVIELIHTATLLHDDVVDESDLRRGRQTANAMFGNQASVLVGDYLYSRSFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E LS +A GE+ QL + DV E Y VI+ KTA+LF+AA +++
Sbjct: 124 MVEVGEMRVMEVLSETTNEVAAGEVLQLMNVNDPDVDEASYYQVIERKTAILFAAATQLA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG V + L+ YG+ LG AFQLVDD LDY + E+GKN+G+D GKPTLP+I
Sbjct: 184 AILAGASKDVEEGLREYGLQLGNAFQLVDDALDYAADTEELGKNVGDDLAEGKPTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G+ + + I G + N+ I+++ A+ T A KA +L+
Sbjct: 244 AMQHGSDTDAQMIRQAIEQGGLD--NMDAILRIIQDTGAIEYTYQSAEKAVAKAISALKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K++L+++ + L+R +
Sbjct: 302 LPESQYKQALIDIANLSLKRNS 323
>gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 322
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 187/321 (58%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN VLVGDFL S++F M+
Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPRVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ L+E+ +F + R +
Sbjct: 302 PPSEYRDVLVELSEFAVARTH 322
>gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2]
Length = 324
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 128/322 (39%), Positives = 190/322 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A +
Sbjct: 3 INQIRALSNDDMQAVNHLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGIE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+H LA +EFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M
Sbjct: 63 NADHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAVFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ K ++ LS +AEGE+ QL + TE Y VI KTA LF AA +++
Sbjct: 123 MVSLKRMRVMDILSEATNQIAEGEVLQLMNCNDASTTEARYFDVIYGKTARLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ +V A++ YG +LG AFQL DD+LDY + +EMGKN G+D GKPTLP++
Sbjct: 183 AVLTDQPENVEHAMQEYGKHLGTAFQLADDILDYMADSDEMGKNAGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + + +L + IM AL T A + + A DSL
Sbjct: 243 AMWNTDSEEDKALIRDAIEQSNGLPHLTRIQQIMESTGALDYTRTCANNEVKMAIDSLSI 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K++L+ + ++R +
Sbjct: 303 IPDSPYKEALIALAHISVERTS 324
>gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti]
Length = 338
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 184/322 (57%), Positives = 237/322 (73%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLTL DME+VN IL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 VKPLVDLTLSDMERVNQPILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR WGNQ SVLVGDFLL QAF M
Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTFWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL V ++KTA LF+AA EV
Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLRVNRAKTAALFAAASEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR K TLPVIL
Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFRESKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L
Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S WK +L+EV+DFC+ R++
Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338
>gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA143]
gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA143]
Length = 323
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD++W+++L+ + +QR
Sbjct: 302 LPDTTWREALIGLAHIAVQR 321
>gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
684]
gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
684]
Length = 322
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 194/321 (60%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + + ++M V + + S+V +I V +Y++ SGGKR+RPML L A + Y+
Sbjct: 1 MERVLQMLEEEMALVEQQFRQDLDSEVTLIRKVGEYVLASGGKRMRPMLVLLCARLAAYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ +A +EFIHTATLLHDDVVD + LRRG +A VWGN+ SVLVGDFL S++F +
Sbjct: 61 GESHIGVASVVEFIHTATLLHDDVVDSADLRRGAASANNVWGNEASVLVGDFLFSKSFSI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ T S L+ALS +AEGE+ QL + +LD++EE Y+ V++ KTAVL +AA
Sbjct: 121 MVRTGSLPILQALSDATTNMAEGEVLQLISTCDLDLSEERYMQVVRDKTAVLIAAACRCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ GV QAL+ +GM LGIAFQ +DD LDY + E GK G D GK TLP+I
Sbjct: 181 GILGGVSAEQEQALQEFGMELGIAFQFMDDALDYVADQAEFGKACGHDLEEGKMTLPLIE 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ E++ + + ++S E+L+K ++ + + T RA + AK L
Sbjct: 241 TLRHCSRDERDRVEQIVEKDQLSDEDLEKVIALIHQYDGIDYTRKRAKQLVESAKQRLAA 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
D K++L + D+ + R
Sbjct: 301 FEDGEAKQALEILADYVVSRS 321
>gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
Length = 335
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 177/322 (54%), Positives = 230/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DME+VN LIL R SDV MIP+V +LI SGGKRLRPMLT+A A + Y
Sbjct: 14 IETLVRLVKGDMERVNALILSRTGSDVAMIPEVANHLISSGGKRLRPMLTIACAALSSYE 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M
Sbjct: 74 GDGHIKLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKM 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E L+ LS ACT+AEGE+ QL+ +KN + +E+DYL VI+ KTA LF+AA EV
Sbjct: 134 MVEVGILECLDILSTAACTIAEGEVMQLAAAKNTETSEDDYLAVIRGKTAELFAAACEVG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + + A +S+GMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 194 AVLNARPKAEQAACRSFGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FWK + G+ + ENL A ++ ++RAL DT RA YG AKD+L
Sbjct: 254 AFRRGDAEERAFWKRCLETGETTDENLAHAVGLLTKHRALADTIERARHYGAMAKDALAL 313
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L E VDFC+ R +
Sbjct: 314 FPASHAKDALAEAVDFCISRAH 335
>gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
Length = 498
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 358 GLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 418 AMRNGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMTACGSLEWTRQRAEDEADKAIAALQI 476
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 477 LPDTPWREALIGLAHIAVQR 496
>gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
Length = 323
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNATILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ ++AF M
Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTGLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAAAQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLAEASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHNGTSEQALMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ ++++L + +QR
Sbjct: 302 LPENEYRQALEGLAHIAVQR 321
>gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 338
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 182/322 (56%), Positives = 235/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y
Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV
Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGTK E+ FWK I D L+KA +M + A+ DT RA +G+ A+D+L
Sbjct: 257 AYRRGTKAERTFWKRAIEDNVADDAGLEKATGLMTRHGAIADTIGRARHFGEIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + K +L++V+DFC+ R+N
Sbjct: 317 LEATPQKSALIDVIDFCISRVN 338
>gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 408
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 178/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 89 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 148
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 149 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 208
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 209 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 268
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I
Sbjct: 269 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 328
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + L + RA Y A+ +L
Sbjct: 329 AMAHSDATTRERLRQIVEQG--DAAAMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 386
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 387 LPYSPAVAALRGLARYAVERTH 408
>gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 332
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 178/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I
Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332
>gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489]
Length = 323
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M R+L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACRSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 302 LPDTPWREALIGLAHIAVQR 321
>gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512]
Length = 338
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 192/322 (59%), Positives = 247/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR
Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK +LMEV+DFC++R+N
Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338
>gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 381
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 61 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 120
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 121 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 181 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 240
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 241 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 300
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 301 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 359
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ W+++L+ + +QR
Sbjct: 360 LPDTPWREALIGLAHIAVQR 379
>gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
Length = 333
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 135/317 (42%), Positives = 190/317 (59%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ + +D VN I ++ S + ++ + +Y++ SGGKR+RP+L L A L Y GD
Sbjct: 17 IHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLLAARSLGYEGDQ 76
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
HV LA IEF+HT+TLLHDDVVD+S +RRG+ A WGN SVLVGDFL S++F M++
Sbjct: 77 HVALATLIEFMHTSTLLHDDVVDESHMRRGRATANDAWGNAPSVLVGDFLYSRSFQMMVG 136
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S +E LS CT+AEGE++QL+ N DV E Y I+ KTA+LF AA ++I
Sbjct: 137 VGSMRIMEILSAATCTIAEGEVQQLTNVGNPDVDEAAYFETIQGKTAMLFEAASHCGAII 196
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A AL++YG LG+AFQLVDD+LDYRG+ + MGKN+G+D GKPTLP+I A
Sbjct: 197 ADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGDADTMGKNVGDDLAEGKPTLPLIQAMV 256
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G+ + + I G + E L + I+ + AL T+ RA KA L LP
Sbjct: 257 TGSPEQAKVIRQAIRQGGL--ERLDEVLAIVHDTGALDYTQRRAEEMSAKALAQLEVLPP 314
Query: 304 SSWKKSLMEVVDFCLQR 320
S ++ S+ ++ + R
Sbjct: 315 SVFRDSMEQLAHRAVDR 331
>gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 331
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y
Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A +
Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G + + IM E+++L RA QKA D+++
Sbjct: 251 AMRHGNPQQAALIREAIEQGGKRDA-IDEVLAIMAEHKSLDYAMDRAKQEAQKAIDAIQI 309
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 310 LPESEYKQALISLAYLSVSRS 330
>gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
Length = 323
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 136/320 (42%), Positives = 191/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+
Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAEATPEEEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G+ + + I G L+ M + +L T RA KA ++LR
Sbjct: 243 AMQHGSPEQAKMIREAIEQGN-GRHLLEPVLEAMNQCGSLEWTRSRAEQEADKAIEALRI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S W+ +L + +QR
Sbjct: 302 LPESPWRSALESLAHMSVQR 321
>gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 325
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 131/325 (40%), Positives = 205/325 (63%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y
Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++
Sbjct: 124 MVGLDNMKIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183
Query: 181 SLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+I+ + S + ++K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A + E+ K I G+ ++ + I++ + A+ + A Y KAK+S
Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQY---DISEIINIVKSSGAVEYSYQVACQYADKAKES 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LP+S +K++++ + D ++R +
Sbjct: 301 ISFLPESEYKQAMILLCDLAVKRKS 325
>gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652]
gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652]
Length = 346
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 192/322 (59%), Positives = 247/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR
Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 85 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLAVIRAKTAALFAAAAEVG 204
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 205 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L
Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 324
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK +LMEV+DFC++R+N
Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346
>gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
Length = 323
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 135/322 (41%), Positives = 190/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M +L T RA KA +L
Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRARAEEEADKAIAALEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S W+ +L+ + +QR +
Sbjct: 302 LSPSPWRDALIALAHMSVQRDH 323
>gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 332
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 178/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E E+GK++G+D GK TLP+I
Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKSLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALET 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332
>gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
Length = 324
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 127/322 (39%), Positives = 188/322 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L+ DM+ VN LI +++ S+V +I + Y++ SGGKRLRP+LT+ +A +
Sbjct: 3 IDQIRALSNDDMQAVNQLIQQQVDSEVALINQLGFYIVNSGGKRLRPLLTVLSARAMGID 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M
Sbjct: 63 NNEHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ K +E LS +AEGE+ QL + TE Y VI KTA LF AA +++
Sbjct: 123 MVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDAGTTEARYFDVIYGKTARLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + +A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++
Sbjct: 183 AVLTEQNEHIERAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T + + +L + IM E AL T A Q A DSL
Sbjct: 243 AMWHATNDSDKALIQEAIEQSNGLPHLTRIQGIMEETGALDYTRQCAQKEVQMAIDSLSA 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS +K++L+ + ++R +
Sbjct: 303 IEDSKYKEALIALAHISIERTS 324
>gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
KLH11]
gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
KLH11]
Length = 332
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 152/322 (47%), Positives = 210/322 (65%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L +ME VN LI R+ SD IP+V +L+ +GGKRLRPMLTLA A + +Y
Sbjct: 11 ERLAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEAGGKRLRPMLTLAAAQLFDYS 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 71 GDHHIRLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ Q++ + +LD +E YL V++ KTA LFSAA EV
Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAATDLDTSEAIYLQVVRGKTAALFSAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVIAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E FW+ TI G+ +L A +MR+ L T A + KAK +L+
Sbjct: 251 AVAQATAEEHAFWERTIGRGRQEEGDLDHALSLMRKYGTLEATRADALGWATKAKTALQL 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L + D+ + RLN
Sbjct: 311 LPDHEIRNLLGALADYVVSRLN 332
>gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
Length = 323
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 135/322 (41%), Positives = 190/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSIKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M +L T RA KA +L
Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRTRAEEEADKAIAALEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S W+ +L+ + +QR +
Sbjct: 302 LSPSPWRDALIALAHMSVQRDH 323
>gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 339
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 151/319 (47%), Positives = 221/319 (69%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L L D++KVN I+ R+ S VEMIP + ++I +GGKRLRP+LTLA+A + + G
Sbjct: 19 DALVALVKDDLQKVNHAIVDRMHSPVEMIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F ++
Sbjct: 79 ERHIKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELM 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + +
Sbjct: 139 VEDGSLSVLAILSRASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGA 198
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILA
Sbjct: 199 VVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILA 258
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
F+RG E+ FW+ + + S E++ +A +M ++ +L T RA YG+ A+D+L
Sbjct: 259 FRRGGDEERAFWRRCLEELDQSDEDIGQAIKLMEKHGSLAATIARARHYGEIARDALGIF 318
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS K+++++V+DFC+ R
Sbjct: 319 PDSPVKQAMIDVIDFCIDR 337
>gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
L20]
gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 331
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 132/324 (40%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A ++ I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGGEREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S +K++L+ + + R
Sbjct: 307 LAVLPESEYKQALISLAYLSVDRS 330
>gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703]
Length = 323
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 191/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I +G L+ + M++ +L T RA KA +L+
Sbjct: 243 AMHNGTPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S + +L + +QR
Sbjct: 302 LPESDHRLALEGLAHIAVQRS 322
>gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 339
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 149/319 (46%), Positives = 221/319 (69%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G
Sbjct: 19 DALVALVKDDLEKVNRAIVDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F ++
Sbjct: 79 ERHIKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELM 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + +
Sbjct: 139 VEDGSLSVLAILSHASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGA 198
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILA
Sbjct: 199 VVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILA 258
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
F+RG E+ FW+ + + + ++ +A +M ++ +L T RA YG+ A+D+L
Sbjct: 259 FRRGDDEERAFWRRCLEELDQADNDIGRAIKLMEKHGSLAATIARARHYGEIARDALGIF 318
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS+ K+++++V+DFC+ R
Sbjct: 319 PDSAVKQAMIDVIDFCIDR 337
>gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3]
Length = 337
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 169/322 (52%), Positives = 232/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L LT +DM++VN LI+ S+V MIP++ YLI SGGKR+RPM+TLATA M EY+
Sbjct: 16 LYPLFSLTKEDMKRVNQLIISMAKSNVTMIPEISNYLISSGGKRIRPMITLATAHMFEYQ 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M
Sbjct: 76 GDEHIKLATAVEFMHTATLLHDDVVDESELRRGKSTARILWGNQASILVGDFLLGQAFKM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL LS A +AEGE+ QLS +KN++ DYL +IK+KTA LFSAA E+
Sbjct: 136 MVDVGSLEALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIIKAKTAALFSAAAEIG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL
Sbjct: 196 PIIAGYGHEERSALHQYGLSLGLAFQLIDDVLDYSSNTQYLGKNIGDDFREGKITMPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ RG EK FWK + + + E+LK A ++ + L+DT +A YG++A D+L
Sbjct: 256 SYTRGNDTEKTFWKQALENNHNNDESLKHAQHLIEKYNGLIDTIEQARIYGKRAIDALSS 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ ++ K +L++++DFC++R+N
Sbjct: 316 IKENPAKNALIDIIDFCIERVN 337
>gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
Length = 323
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + TA L Y+
Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIISGGGKRIRPMIAVLTARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILSGASSEQELALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + ++ + I +G L+ M+ +L T RA KA +++C
Sbjct: 243 AMHHGNEEQRTMIRQAIEEGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + +QR
Sbjct: 302 LPASDFRTALEGLAHLAVQR 321
>gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4]
Length = 322
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 187/321 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L +D++ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y
Sbjct: 1 MEAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALLLLSAKLCGYH 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ LS +AEGE+ QL + +LDVT E Y+ V+KSKTA+L SAA +
Sbjct: 121 MVADGDLNVLKVLSGATTIIAEGEVLQLVCTSDLDVTTERYIEVVKSKTAILLSAACQSG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + AL+++GM LGIAFQLVDD LDY + GK+IG D GK TLP+I
Sbjct: 181 AILGKASSEREVALQNFGMELGIAFQLVDDTLDYVASEEQFGKSIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q T EK ++ + ++ F ++ + + A Y + K L
Sbjct: 241 TLQHCTAAEKEKIAEVVDKDVLDEDDFAAVFELVHQYGGIDHAVTVAKDYVARCKAYLDV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
DS K +L+ + D+ + R+
Sbjct: 301 FEDSPEKYALVNLADYVVTRV 321
>gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103]
gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103]
gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355]
Length = 323
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+
Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G+ + + I G L M + +L T RA KA +L+
Sbjct: 243 AMNHGSPEQAKMIRDAIEQGN-GRHLLAPVLEAMNQCGSLEWTRQRAEQEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ W+ +L + +QR
Sbjct: 302 LPETPWRSALEALAHMSVQR 321
>gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 331
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 132/324 (40%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A ++ I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGGEREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S +K++L+ + + R
Sbjct: 307 LAVLPESEYKQALISLAYLSVDRS 330
>gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21]
gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21]
Length = 322
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 126/321 (39%), Positives = 191/321 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L + + Y
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLASRLCGYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GNRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV
Sbjct: 121 MVTDGDLRILKVLADATTIIAEGEVLQLVCTCDLDITVERYIEVVRSKTAILLSAACEVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I
Sbjct: 181 AILGEADPEHRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T++E++ S + +S E+ + +++ + T A + K L
Sbjct: 241 TLRNCTEQERDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAAEHVVLCKRHLEK 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S+ +++L E+ ++ + R+
Sbjct: 301 FPPSATREALAELAEYVVTRV 321
>gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040]
gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040]
Length = 336
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 146/322 (45%), Positives = 211/322 (65%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++L + ++E VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 15 ELLAETLAPELEAVNLLIRERMASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 75 GEHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV
Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLGTTEEIYLQVVRGKTAALFSAATEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI
Sbjct: 195 GVIAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW TI G+ +L+ A +M + L T A + KAK +L
Sbjct: 255 AIAQAGDEERAFWHRTIAKGRQEEGDLEHALSLMAKYATLEATRADAIGWADKAKSALAD 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ + L+++ D+ + RLN
Sbjct: 315 LPEHPIRTLLIDLADYVVSRLN 336
>gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
Length = 323
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M +L T+ RA KA +L+
Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ W+++L+ + +QR +
Sbjct: 302 LPDTPWREALIGLAHIAVQRDH 323
>gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
Length = 332
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 144/322 (44%), Positives = 207/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++L +ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 ELLAATLSDEMEAVNTLIQTRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAARLCGYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 71 GAHHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S + L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA +V
Sbjct: 131 MVETGSLQVLDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATQVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + + L YG LGIAFQ+ DD+LDY+G+ GKNIG+DFR K TLPVI
Sbjct: 191 GVIAAAPETQIKGLFDYGDALGIAFQIADDLLDYQGDAATTGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI G+ +L++A +M + L T A + +KA ++L
Sbjct: 251 AVAQATDEERAFWIRTIEKGQQQEGDLEQALALMAKYGTLEATRQDALLWAEKATEALSA 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD ++ L ++ ++ + RL+
Sbjct: 311 LPDHPIRQMLHDLAEYVVSRLH 332
>gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044]
gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 323
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M +L T+ RA KA +L+
Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ W+++L+ + +QR +
Sbjct: 302 LPDTPWREALIGLAHIAVQRDH 323
>gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
Length = 323
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 139/322 (43%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 3 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 123 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I
Sbjct: 183 AVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ EK + I G + ++K + AL T+ +A KA +L
Sbjct: 243 AIAHGTEEEKQLIRQAIEQGDGT-HAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K +L+ + + R +
Sbjct: 302 LPDSDFKTALISLAKISVDRNH 323
>gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1]
Length = 320
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQ 319
LPD+ W+++L+ + +Q
Sbjct: 302 LPDTPWREALIGLAHIAVQ 320
>gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
Length = 323
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN +IL ++ SDV +I + Y+I GGKR+RPM+ + L Y
Sbjct: 3 LESIIELTNEDMSAVNKVILSQLNSDVALINQLGYYIISGGGKRIRPMIAILAGRSLGYS 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GHKHTQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAASHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++
Sbjct: 183 AILANATPAQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + E + I G L M+ +L T RA QKA D+L
Sbjct: 243 AMNHGNEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLDYTYQRAQEEAQKAIDALDI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS++K++L+ + +QR +
Sbjct: 302 LEDSAYKQALIGLAHIAIQRHS 323
>gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
Length = 323
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 200/322 (62%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y+
Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + E LE L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 123 MTELGNMEVLEVLADATNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLAQSPIEAQNALADYGKFLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT++E+ ++ I G + +N+++ + AL T RA KA ++L
Sbjct: 243 AMAHGTEKEQELIRTAIEKGDGT-QNIEEILNALHSCGALDYTFRRALEESDKAIEALSI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P+S +K++L+ + ++R N
Sbjct: 302 IPESDYKQALISLAKIAVERSN 323
>gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22]
gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22]
gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
Length = 323
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GMLADCSAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M +L T+ RA KA +L+
Sbjct: 243 AMHHGTPDQAAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ W+++L+ + +QR +
Sbjct: 302 LPDTPWREALIGLAHIAVQRDH 323
>gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
19061]
gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
19061]
Length = 323
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 128/322 (39%), Positives = 188/322 (58%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L+
Sbjct: 3 LESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALQCG 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M
Sbjct: 63 DEKHIKVAALIEFIHTATLLHDDVVDESDMRRGKETANAIYGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF A +
Sbjct: 123 MTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDISEDDYMRVIYSKTARLFEVAAHSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++
Sbjct: 183 AILANATPEQEIALRDYGCYLGTAFQLIDDLLDYDSDNNTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L M++ +L T RA KA +L+
Sbjct: 243 AMNHGTPEQSALIRDAIEKGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS +K +L+ + +QR++
Sbjct: 302 LDDSPYKAALVGLAHIAVQRVS 323
>gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1]
Length = 331
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y
Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A +
Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G + + IM E+++L RA QKA D+++
Sbjct: 251 AMRHGNPQQAALIREAIEQGGKRDA-IDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 309
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K++L+ + + R
Sbjct: 310 LPESEYKQALISLAYLSVSRS 330
>gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
Length = 331
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 191 AVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ E+ + I G + ++K + AL T+ +A KA +L
Sbjct: 251 AIAHGTEEEQQLIRQAIEQGDGT-HAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAV 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K +L+ + + R +
Sbjct: 310 LPDSDFKTALISLAKISVDRNH 331
>gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 333
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 150/322 (46%), Positives = 207/322 (64%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L + +ME VN LI +R+ S IP+V +LI +GGKRLRPMLTLA A +L Y
Sbjct: 11 LDRLAEALAPEMEAVNALIRERMASRHAPRIPEVTAHLIEAGGKRLRPMLTLAAAKLLGY 70
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F
Sbjct: 71 GGPYHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQ 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+++E S LE LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV
Sbjct: 131 LMVEPGSMRTLEILSNAAATIAEGEVLQLTAAQDLATNEDIYLQVVRGKTAALFSAATEV 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+IAGV ++ +AL YG LGIAFQ+VDD+LDY G + KN G+DFR K TLPVI
Sbjct: 191 GGVIAGVPDAQVRALFDYGDALGIAFQIVDDLLDYGGTAEAIDKNTGDDFRERKLTLPVI 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A R T E+ FW TI G +L+ A ++ + A+ D A + +A+ SL+
Sbjct: 251 KAVARATPEERAFWSRTIEKGDQKDGDLEHALELLARHGAMADARRDALDWAARARASLQ 310
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+ + L ++ DF ++R+
Sbjct: 311 ILPEHPIRDMLSDLADFVVERI 332
>gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
Length = 336
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 176/322 (54%), Positives = 230/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DME+VN +IL R S+V MIP+V +LI SGGKRLRP LTLA A + Y
Sbjct: 15 IDQLVELVAADMERVNAVILSRTGSEVTMIPEVANHLISSGGKRLRPNLTLAMAQLTGYS 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GEGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IAG + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PAIAGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDAERAFWIKALERGEITEPDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPTSPMKAALEQVVAFCLARSH 336
>gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
Length = 342
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 160/320 (50%), Positives = 215/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L +D+ VN +IL R+ S VEMIP + YLI +GGKRLRP+LTLA A + Y+
Sbjct: 21 LDDLTALVAEDLSAVNQIILDRMQSQVEMIPQLAGYLIAAGGKRLRPVLTLAAANLCGYQ 80
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H LLA +EFIH+ATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S+AF M
Sbjct: 81 GEHHRLLAAVVEFIHSATLLHDDVVDESDLRRGMASANAVFGNKASVLVGDFLFSRAFEM 140
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +S + L LS + +AEGE+ QL + + + +E+ YL VIK KTA LF+AA V
Sbjct: 141 MVEVQSLDVLRILSGASAIIAEGEVLQLRTTNDTETSEQAYLEVIKGKTAELFAAACRVG 200
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL YGMNLGIAFQLVDDVLDY ++GK +G+DFR GK TLPV+L
Sbjct: 201 AVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSALQAKLGKTVGDDFREGKITLPVVL 260
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW+ + D +L+ A +M + AL DT RA YG A+DSL
Sbjct: 261 AFRRGNDEERAFWRRVMEDLDQKDGDLEHAQTLMARHNALKDTVERARHYGSIARDSLGL 320
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
D K++L+EV+DF + R
Sbjct: 321 FADGPIKQALLEVIDFVIDR 340
>gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC
BAA-1498]
Length = 337
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 169/322 (52%), Positives = 225/322 (69%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L LT +DME VN L + S+V MIP++ YLI SGGKR+RPM+TLATA M Y+
Sbjct: 16 LHPLFSLTKEDMECVNQLTISMAKSNVAMIPEISNYLISSGGKRIRPMITLATAHMFGYQ 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+SALRRGK AR++WGNQ S+LVGDFLL QAF M
Sbjct: 76 GDKHIKLATAVEFMHTATLLHDDVVDESALRRGKSTARIIWGNQASILVGDFLLGQAFKM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV
Sbjct: 136 MVDVGSLDALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL
Sbjct: 196 PIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ RG EK FWK + + E LK A ++ + L DT +A YG++A D+L
Sbjct: 256 SYTRGNDIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSS 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ D+ K +L++++DFC++R+N
Sbjct: 316 IKDNPAKNALIDIIDFCIERVN 337
>gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
Length = 323
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G ++ + I G L+ M+ +L T RA KA +++C
Sbjct: 243 AMHHGNDEQRTMIRQAIEQGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + +QR
Sbjct: 302 LPASDFRTALEGLAHLAVQR 321
>gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 338
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 248/322 (77%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR
Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK +LMEV+DFC++R+N
Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338
>gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas
haloplanktis TAC125]
gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas
haloplanktis TAC125]
Length = 323
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 195/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+
Sbjct: 3 IKAIQALIENDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F +
Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++
Sbjct: 123 MVGLGKMQVMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I + AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I
Sbjct: 183 AIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G +++ + I +++L++ +++ AL T +A KA L
Sbjct: 243 AMQHGNEQQTQLIRDAIEHSN-GMDHLEEILAALKQTNALEFTMQKAELEADKAIACLDF 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L +S +K++L+ + + R +
Sbjct: 302 LAESEYKQALVSLARIAVDRDH 323
>gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
Length = 323
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ V+ LI K++ SDV +I + Y+I GGKR+RP+L++ A + Y
Sbjct: 3 LNAIRQLADADMKAVDQLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIAYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEAHLKLAAIVEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E KS E LE L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++
Sbjct: 123 MTELKSMEVLEVLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A V+ AL YG LG AFQL DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 183 GVLAESSIEVQTALADYGKYLGTAFQLTDDLLDYTADTEALGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + E+ + I G + E++ +++ AL TE RA +KA +L
Sbjct: 243 AIANGNELERQLIRDAIEKGDGT-EHIDTILNALKQCGALDYTEKRAREEAEKAIRALDL 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K++L+ + + R +
Sbjct: 302 IPDSDYKQALISLARIAVARDH 323
>gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 337
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 176/320 (55%), Positives = 231/320 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLATA + YR
Sbjct: 16 IEPLVALVSADMERVNQTILSRTASDVSMIPEVANHLISSGGKRLRPMLTLATAGLCNYR 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M
Sbjct: 76 GAGHVKLAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKM 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L+ LS A +AEGE+ QLS +K+ + +E+DYL VI++KTA LF AA EV
Sbjct: 136 MVEVGSLPCLDVLSAAAAVIAEGEVMQLSAAKDTETSEDDYLAVIRAKTAALFGAAAEVG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+AG + A + YG+NLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 196 PLLAGRPKAEIAACRGYGLNLGVAFQLIDDALDYGGASAKLGKNVGDDFREGKITLPVVL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+F+RGT +++FW+ T+ G+I+ +L+ A M ++RAL DT RA YG A+D+L
Sbjct: 256 SFRRGTAEQRDFWRRTLERGEIADSDLEIAIATMHKHRALEDTVERARHYGAMARDALEL 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S WK +L VVDFC+ R
Sbjct: 316 FPASPWKFALSNVVDFCVSR 335
>gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae
3841]
gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 338
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 249/322 (77%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR
Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GENHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A V S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVAEVGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK +LMEV+DFC++R+N
Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338
>gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
Length = 323
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y
Sbjct: 3 LESIVELTSEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYS 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GQKHIQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++
Sbjct: 183 AILASATPEQEKALQDYGRYLGTAFQLIDDLLDYDADNKQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ E + I G L M+ +L T RA QKA D+L
Sbjct: 243 AMNHGTEEEAALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAKEESQKAIDALST 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS +K +L+ + + + R +
Sbjct: 302 LDDSVYKDALISLAEVAISRHS 323
>gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
holarctica FSC022]
Length = 325
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
Length = 325
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 131/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ S+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida Fx1]
Length = 325
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 132/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYT---IDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 323
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G+ + + I G L+ M +L T RA KA +L+
Sbjct: 243 AMHNGSADQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+PDS W+ +L+ + +QR
Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321
>gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
Length = 323
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L+ +DM+ VN LIL R+ SDV ++ V Y++ GGKR+RP++ +A L Y+
Sbjct: 3 IKAIQALSKQDMDAVNELILARLQSDVALVNQVGYYIVNGGGKRIRPLIATLSARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHT+TLLHDDVVD+S +RRG+ A +GN SVLVGDFL S++F M
Sbjct: 63 GQQHVDVAAIIEFIHTSTLLHDDVVDESDMRRGRKTANAAFGNAASVLVGDFLYSRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + ++ LS +AEGE+ QL + D E+ Y+ VI KTA LF AA +++
Sbjct: 123 MAKLNNSKIIDILSDATNVIAEGEVLQLMNCNDADTDEKRYMDVIYYKTAKLFEAATQLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IA + QA+ YG++LG AFQL+DDV+DY + EMGKN+G+D GKPTLP+I
Sbjct: 183 AVIAEQPADIEQAMIDYGVHLGAAFQLIDDVMDYTSDAQEMGKNVGDDLAEGKPTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT++E + I ++NL+ I+ N +L +A + A ++
Sbjct: 243 AMAHGTEQEALMVREAIEKMN-GMDNLEAILAILERNGSLNYCFDKAQQEAELAVKAIAV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K++L+ + R N
Sbjct: 302 LPESEYKQALISLAYIAANRSN 323
>gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 337
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 140/320 (43%), Positives = 204/320 (63%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA A ++ Y
Sbjct: 16 LQPLLALVADGMNSVNAVILDRMQSRIPLIPALAGHLIAGGGKRMRPMLTLAGAELVGYG 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S++F +
Sbjct: 76 GSRHYKLAAAVEFIHTATLLHDDVVDGSDMRRGKKAANIIYGNPATVLVGDFLFSRSFEL 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L LS + + EGE+ QL + ++ +EE YL +I KTA LF+AA ++
Sbjct: 136 MVEDGSIKVLRILSNASAIITEGEVDQLIAQREIETSEERYLAIINGKTAALFAAACRIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL +YG +LG AFQL DD +DY + + MGK+ G+DFR GK TLPVIL
Sbjct: 196 AVVAERPEDEELALDAYGRHLGTAFQLADDAIDYDSDADVMGKDKGDDFREGKMTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG E+ FW+ I + +L A ++R++ A++ T RA Y Q+A D++
Sbjct: 256 AYARGNAEEREFWRRAIAGERNGEADLAHAIELIRKHDAVLATRERARHYAQRAIDAIAS 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S+ K +++E +F + R
Sbjct: 316 FPASAAKSAMIEAAEFAVAR 335
>gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
Length = 332
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 209/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++L +ME VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 ELLAATLSSEMEAVNSLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 71 GEHHIKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S + L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV
Sbjct: 131 MVETGSLKVLDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVIAGASETEIKALFDYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E FW TI G+ +L++A +M + + L T A ++ KA D+L
Sbjct: 251 AVAQATDEEHAFWTRTIEKGRQEEGDLEQALALMAKYQTLEATRQDALNWAAKATDALTA 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ ++ L ++ D+ + RLN
Sbjct: 311 LPEHPIRQMLHDLADYVVSRLN 332
>gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
Length = 336
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 178/322 (55%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDRLVSLVADDMAGVNTTILARTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYV 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + + A ++ GMNLGIAFQLVDDVLDY G ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVIAERPKAEQTACRAVGMNLGIAFQLVDDVLDYGGTAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E++FW T+ G+++ +L A +M ++RAL DT RA YG KA D+L
Sbjct: 255 AFRRGNDVERDFWIRTLERGEVADADLDHAIGLMAKHRALEDTMQRAEHYGAKAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R N
Sbjct: 315 FPSSPMKSALEQVVAFCLARSN 336
>gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
30120]
gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
30120]
Length = 323
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y
Sbjct: 3 LESIVELTAEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAILAGRSLGYS 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 EHKHIQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPDITEESYMQVIYSKTARLFEAASHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++
Sbjct: 183 AILANATPEQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G + E + I G L+ M+ +L T RA QKA D+L
Sbjct: 243 AMQHGNEEESALIRQAIEQGN-GRHLLETVLSTMKRCGSLEYTYQRAQEEAQKAIDALNA 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS +K++L+ + +QR +
Sbjct: 302 LEDSVYKEALIGLAHVAIQRHS 323
>gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3]
gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3]
Length = 331
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 191 AVLAGATPEQEAALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ E+ + I G + ++K + AL T+ +A KA +L
Sbjct: 251 AIAHGTEEEQQLIRQAIEQGDGT-HAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAV 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K +L+ + + R +
Sbjct: 310 LPDSDFKTALISLAKISVDRNH 331
>gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
Length = 335
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 177/322 (54%), Positives = 226/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 14 IEELVALVAGDMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYT 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA ++EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M
Sbjct: 74 GDGHIKLAASVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRM 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 134 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + + A +S GMNLGIAFQLVDDVLDY G+ ++GKN G+DFR GK TLPV+L
Sbjct: 194 PVIANRPKAEQTACRSVGMNLGIAFQLVDDVLDYGGKSAKLGKNTGDDFREGKITLPVVL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + G+I +L A +M ++RAL DT RA YG A D+L
Sbjct: 254 AFRRGNDTERAFWIKALERGEIGDTDLDHAIGLMNKHRALEDTLSRAQHYGAMAVDALAL 313
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 314 FPSSPMKSALEQVVAFCLARSH 335
>gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
Length = 329
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++T+ A L +
Sbjct: 9 MNAIQALSQADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLITVLAARALGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GQKAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IA + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIIADADDEQEKALQNYGRYLGTAFQLVDDVLDYSANAKALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G +++ + I G E + + IM E+++L RA QKA D+++
Sbjct: 249 AMHHGNEQQAALIREAIEQGGK-REAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 322
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 125/321 (38%), Positives = 191/321 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLAARLCGYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GSRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV
Sbjct: 121 MVTDGDLGILKVLADATTMIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + +RQA+ YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I
Sbjct: 181 AILGGAEPGLRQAVADYGMDLGIAFQLMDDTLDYTASQEQFGKSIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + E++ S + +S E+ + +++ + T A + K L
Sbjct: 241 TLKQCSDEERDLIASVVEKDLLSDEDFELVLALVQRYGGIEHTVASAGEHVALCKKHLEK 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S ++++ ++ D+ + R+
Sbjct: 301 FPPSQAREAMADLADYVVTRV 321
>gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
Length = 323
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 143/322 (44%), Positives = 197/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E K + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++
Sbjct: 123 MTELKCLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 183 GLLADSPIEVQTALAEYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G EK + I G + E+++ + AL TE RA +KA +L
Sbjct: 243 AMANGNDTEKALIREAIEKGDGT-EHIEVILAALNNCGALKYTEQRAIEESEKAIAALAI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P+S +K +L+ + QR N
Sbjct: 302 IPESDYKTALISLAKLATQRSN 323
>gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
Length = 322
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 131/321 (40%), Positives = 187/321 (58%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +D + V+ LIL+R+ SDV +I + Y++ SGGKRLRP+ L A Y
Sbjct: 3 LSRIRQPVAEDTKAVDALILRRLQSDVVLINQIGHYIVNSGGKRLRPLSVLLAARACGYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EFIHT+TLLHDDVVD S LRR + A +VWGN SVLVGDFL S++F M
Sbjct: 63 GERHIDLAAIVEFIHTSTLLHDDVVDGSELRRNRETANVVWGNDASVLVGDFLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + +E L+ +AEGE+ QL ++ D E Y+ VI KTA LF A +
Sbjct: 123 MVDVGNMRVMEVLAHATNRIAEGEVLQLLNERDPDTDEARYMEVISRKTATLFEAGTRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IA + +A++ YG+ LGIAFQLVDD LDY + E+GKN+G+D GKPTLP+I
Sbjct: 183 AVIAESPPEIEEAIREYGLRLGIAFQLVDDALDYSVDNAELGKNVGDDLDEGKPTLPIIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q GT ++ + I G ++ + A+ T A SY +AK +L
Sbjct: 243 AMQVGTPEQRALLRDAIEHGGRD--RIESVTAAIASTDAIDYTTQLAQSYAAQAKKALER 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S +L + DF + R
Sbjct: 301 LPASPANDALALLADFAVART 321
>gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 331
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 132/324 (40%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESNMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A ++ I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGGEREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S +K++L+ + + R
Sbjct: 307 LAVLPESEYKQALISLAYLSVDRS 330
>gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica URFT1]
gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 325
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 131/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ S+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
Length = 332
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 146/322 (45%), Positives = 205/322 (63%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 DRMAEYLAVDMAAVNTLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYD 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ET + L LS + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV
Sbjct: 131 MTETNNMRVLAILSNASATIAEGEVLQLTAAQNLATDESVYLQVVRGKTAALFSAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG ++ QAL +G LGIAFQ+VDD+LDY+G+ + GKNIG+DFR K TLPVI
Sbjct: 191 GVIAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGDASATGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R E FW TI G+ +L+ A ++ ++ + T A ++ +AK +L
Sbjct: 251 AVARADAEEHAFWTRTIEKGRQEDGDLEHALSLLHKHDTMTQTRAEAVAWANRAKAALDA 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ + L ++ D+ + R+N
Sbjct: 311 LPEHGVRDMLRDLADYVVARIN 332
>gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638]
gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638]
Length = 323
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +LT +DM VN +IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LDKINELTAQDMAGVNAVILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDAHVNIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTEAQERGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ + + I G L+ M +L T RA KA +++
Sbjct: 243 AMRNGSPDQAKLIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAITAIQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+PDS W+ +L+ + +QR
Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321
>gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG]
gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp.
tularensis FSC033]
gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG]
gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 325
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 323
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M +L T RA KA +++
Sbjct: 243 AMRNGTPEQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAAIQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+PDS W+ +L+ + +QR
Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321
>gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4206]
gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4206]
Length = 324
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 136/319 (42%), Positives = 194/319 (60%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y G
Sbjct: 5 KKYNELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEG 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+
Sbjct: 65 NAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMM 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 125 TSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSG 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ A
Sbjct: 185 ILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHA 244
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
GT + ++ I G LK M +L T RA KA +L+ L
Sbjct: 245 MHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQVL 303
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD+ W+++L+ + +QR
Sbjct: 304 PDTPWREALIGLAHIAVQR 322
>gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
Length = 331
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 191 AVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ E+ + I G + ++K + AL T+ +A KA +L
Sbjct: 251 AIAHGTEEEQQLIRQAIEQGDGT-HAIEKIVAALHHCGALTYTQQKAIEESNKAIAALSV 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS++K +L+ + + R +
Sbjct: 310 LPDSNFKTALISLAKISVDRNH 331
>gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 322
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 189/321 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPGLVLLAARLCGYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GNRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV
Sbjct: 121 MVTDGDLRILKVLADATTIIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I
Sbjct: 181 AILGEADPVHRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T +E++ S + +S E+ + +++ + T A Y K L
Sbjct: 241 TLRNCTSQERDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAGEYVVLCKQHLEK 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S+ + +L E+ ++ + R+
Sbjct: 301 FPPSATRDALAELAEYVVTRV 321
>gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549]
Length = 325
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDQIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
Length = 340
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 171/321 (53%), Positives = 232/321 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM++VN LIL R SDV MIP+V ++LI SGGKRLRPMLTLATA + Y
Sbjct: 19 IEGIVTLVRADMDRVNALILSRTGSDVTMIPEVAQHLISSGGKRLRPMLTLATAALSGYE 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD V LA ++EF+HTATLLHDDVVDDS +RRGK+AAR++WGN+ SVLVGDFLL QAF M
Sbjct: 79 GDGAVKLAASVEFMHTATLLHDDVVDDSEMRRGKLAARMLWGNEASVLVGDFLLGQAFRM 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE S AL+ LS A +AEGE+ QL+ +KN+ E+ YL VI+ KTA LF+AA EV
Sbjct: 139 MIEVGSMRALDILSTAAVVIAEGEVAQLAAAKNIATDEDAYLAVIRGKTAELFAAACEVG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + A ++YGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLP++L
Sbjct: 199 PVLAGRPEAEMAAARAYGMNLGIAFQLVDDALDYGGSGADLGKNVGDDFREGKITLPIVL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +R + E+ FW+ + +G+I +L++A ++ + AL +T RA YG++AK +L
Sbjct: 259 AVRRANEDERGFWRRCLEEGEIGEGDLERALALLTRHGALAETVERARFYGEEAKAALVA 318
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + K +L++VVDFC+ R+
Sbjct: 319 LPAGTAKSALIDVVDFCISRV 339
>gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
Length = 323
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A + Y
Sbjct: 3 LEQINELTAQDMADVNATILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAARAVNYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 AILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSADGKTLGKNVGDDLSEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ MR+ +L T A KA +L+
Sbjct: 243 AMRNGTPEQSQMIREAIEKGN-GRHLLEPVLETMRQCGSLEWTRQAAEHEADKAISALKA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S W+ +L + +QR
Sbjct: 302 LPESPWRSALEALAHMSVQR 321
>gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
Length = 331
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GDAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 191 AVLAGATPEHETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT+ E+ + I G + + K + AL T+ +A +KA +L
Sbjct: 251 AIAHGTEEERQLIRQAIEQGDGTQA-IDKIVAALHHCGALAYTQQKAIEESEKAIAALDV 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K++L+ + + R +
Sbjct: 310 LPDSDFKEALVALAKISVDRNH 331
>gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591]
gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591]
Length = 323
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALSYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + ++ + I G L+ M+ +L T RA KA +++C
Sbjct: 243 AMHHGNEEQRIMIRQAIEQGN-GRHLLEPVLAAMQSCGSLAYTRQRAEEEADKAITAIQC 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + +QR
Sbjct: 302 LPASDFRTALEGLAHLAVQR 321
>gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
Length = 331
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 133/324 (41%), Positives = 194/324 (59%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEKIQALAKQDMQAVDAEILAQLNSEVVLINQLGHYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GDKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A + I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHAAQAKGNQAQVDMIRSAIENGGEREQIPAVLEIMAEHQSLDYAMARAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S +K++L+ + R
Sbjct: 307 LAVLPESEYKQALISLAYLSADRS 330
>gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
Length = 329
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNPQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 326
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+
Sbjct: 6 INAIQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQ 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF +
Sbjct: 66 GDEPITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + +
Sbjct: 126 MTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCA 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++
Sbjct: 186 AITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLH 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + I G + L IM E ++L +A QKA DS+ C
Sbjct: 246 AMRNGTPQQSALIREAIEQGGK-RDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISC 304
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ +K++L+ + ++R
Sbjct: 305 LPENQYKQALISLAYLSVER 324
>gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
Length = 322
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ DL DM V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A +Y+
Sbjct: 3 IQSAYDLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M
Sbjct: 63 GSYHIDIAAIIEFIHTATLLHDDVVDSSELRRGRKTANNIWGSEASVLVGDFLYSRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++
Sbjct: 123 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I
Sbjct: 183 AVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +GT ++ I G ENL + + + A+ T A +A +++
Sbjct: 243 AMSKGTAPHVKVIRNAIESGGR--ENLAEVIEAIESSGAIAYTAEAARREADRAMQAVKS 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S ++++L+ + F R
Sbjct: 301 IPPSPYQEALLNLAKFAAYRT 321
>gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1]
gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1]
Length = 330
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 139/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
DL DM +V+ LI +R+ SDV +I + Y+I +GGKRLRPML L A L +RG
Sbjct: 13 SFADLVAADMGEVDALIRRRLASDVALINQISHYIISAGGKRLRPMLVLLFAQALGFRGP 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
LA +EFIHTATLLHDDVVD+SALRRG+ A +GN SVLVGDFL S+AF M++
Sbjct: 73 ERFELAATVEFIHTATLLHDDVVDESALRRGRDTANARFGNAASVLVGDFLYSRAFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
LE L+ +AEGE+ QL + D++ +DYL VI+ KTA LF A+ + ++
Sbjct: 133 SVNRMRVLEVLADATNVIAEGEVLQLMNMHDPDLSIDDYLRVIRFKTAKLFEASARLGAM 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+A V A YG LG AFQLVDD+LDY G + +GKNIG+D R GKPTLP+++A
Sbjct: 193 LADASPGVETACADYGRALGTAFQLVDDLLDYEGATSALGKNIGDDLREGKPTLPLLVAM 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
RGT +++ ++ I G++ + L + I+R AL T A + +A ++L LP
Sbjct: 253 TRGTPAQRDVVRAAIEQGEV--QRLPEIIEIVRSTGALEATREVARAEVARACEALSVLP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS ++++L+ + +R +
Sbjct: 311 DSQYREALLHLCAQSTERSS 330
>gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 338
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 192/322 (59%), Positives = 247/322 (76%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR
Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLDALDVLSSAACIIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL
Sbjct: 197 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAVHYGTIARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ WK SLMEV+DFC++R+N
Sbjct: 317 LPDTVWKSSLMEVIDFCIERVN 338
>gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 330
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM+KVN IL ++ SDV +I + Y+I GGKR+RPM+ L A L Y
Sbjct: 10 IKAIQALIEPDMQKVNTEILAQLNSDVALINQLGFYIIQGGGKRIRPMIALLAARALNYE 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + A IEFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 70 GEKMPVCAAFIEFIHTASLLHDDVVDESDMRRGRATANAAFGNAASVLVGDFIYTRAFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S + L +S LAEGE++QL + + TEE+Y+ VI KTA LF + + +
Sbjct: 130 MAKLNSLKMLTIMSDATNVLAEGEVQQLMNVNDPETTEENYMKVIYRKTARLFEVSTQAA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL+ YG LG AFQLVDDVLDY + MGKN+G+D GKPTLP++
Sbjct: 190 AIMANADEKIESALQQYGRYLGTAFQLVDDVLDYSAQAETMGKNVGDDLAEGKPTLPLLH 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT+ + +S I G E + + IM ++++L RA + QKA D+L
Sbjct: 250 AMRHGTEEQSALIRSAIEQGGK-REIIAEVLAIMAQHKSLDHAMERAKAEAQKAVDALTI 308
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ +K++L+ + + R
Sbjct: 309 LPDNEYKRALISLAYQSVNRT 329
>gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
Length = 323
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAILVARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLANASEEQEVALQNYGRYLGTAFQLIDDLLDYSSDGVTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M++ ++L T RA + KA SL+
Sbjct: 243 AMRNGTPEQAAMIRQAIEQGN-GRHLLEPVLFAMQQCKSLDYTRQRAEAEADKAIASLQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S+++++L + +QR+
Sbjct: 302 LPESNYRQALEGLAHIAVQRV 322
>gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
Length = 322
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 194/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + DL DM+ VN +I ++ SDV +I + Y+I GGKR+RP+L + A ++Y+
Sbjct: 3 LNAIRDLADHDMKMVNQMIYDQLHSDVVLINQLSFYIINGGGKRMRPLLAVLAARAVDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+HV LA IEFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M
Sbjct: 63 GDDHVKLAAIIEFIHTATLLHDDVVDESTMRRGRETANALFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E K LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++
Sbjct: 123 MTELKRPRVLEDLADATNVLAEGEVLQLMNCNDPNTTEESYMQVIYCKTARLFEAATHLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IA V AL YG LG AFQLVDDVLDY + E+GKN+G+D GKPTLP+I
Sbjct: 183 AVIADQPTEVCDALSDYGRYLGTAFQLVDDVLDYTADAEELGKNLGDDLAEGKPTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + +S I +G + + + + +L T RA KA +L
Sbjct: 243 AIAHAPEAQSQQIRSAIENGGCD--EVDEVVATLNQVGSLEYTMQRAVEEADKAIAALDV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP++ ++++L + ++R N
Sbjct: 301 LPETPFREALASLARIAVERRN 322
>gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 325
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 130/325 (40%), Positives = 205/325 (63%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y
Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++
Sbjct: 124 MVGLDNMQIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183
Query: 181 SLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+I+ + S + ++K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A + E+ K I G+ ++ + I++ + A+ + A Y K+K+S
Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQY---DISEIINIVKSSGAVEYSYQVACQYADKSKES 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LP+S +K++++ + D ++R +
Sbjct: 301 ISFLPESEYKQAMILLCDLAVKRKS 325
>gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5]
Length = 344
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 148/320 (46%), Positives = 208/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YR
Sbjct: 23 LHRLAVVLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYR 82
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +
Sbjct: 83 GERHIHLAACVEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFEL 142
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV
Sbjct: 143 MVEDGSLDVLRILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVG 202
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A ++V AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++
Sbjct: 203 GVVADRDSAVCGALACYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLV 262
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ G E+ FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L
Sbjct: 263 AYAAGDGPERAFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALAT 322
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD + +ME D+ + R
Sbjct: 323 LPDDPLRALMMEAADYAVSR 342
>gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 337
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 139/330 (42%), Positives = 193/330 (58%), Gaps = 12/330 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ L +DM VN LI KR+ S+V ++ + Y++ SGGKRLRPML L +A Y+G
Sbjct: 6 AINTLINQDMRAVNVLIQKRLYSEVALVNQIGDYIVNSGGKRLRPMLLLLSARAFAYQGT 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+H+ LA +EFIHTATLLHDDVVD S LRRG+ A +WGN+ SVLVGDFL S+AF M++
Sbjct: 66 HHIDLAAIVEFIHTATLLHDDVVDASLLRRGQETANNIWGNEASVLVGDFLYSRAFQMMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + ++ LS +AEGE+ QL D TE DYL VI +KTA LF AA ++ ++
Sbjct: 126 DINNMRVMKILSEATNVMAEGEVLQLLNCYEPDTTEMDYLRVICAKTAKLFEAAAQLGAV 185
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I+ + +A+ YGM+LGIAFQL+DD LDY + +GKNIG+D GKPTLP+I A
Sbjct: 186 ISEQPSEYEKAMAMYGMHLGIAFQLIDDALDYNATMENLGKNIGDDLTEGKPTLPLIYAL 245
Query: 243 QRGTKREKN------------FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ T ++ ND E +KK +I+ A+ T A
Sbjct: 246 KHATPSQQKILREGISQDGQLHDAIKQNDKTSVDELIKKVIVIVESTGAIRYTMQVAQKE 305
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA +L LP S + ++L + DF + R
Sbjct: 306 ADKAIIALTELPQSPYTEALRSLADFSVNR 335
>gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 322
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDMRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALAGASAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L+ + + + +L T A Y +A L L
Sbjct: 244 MREGTPEQAALVRQAIQKGGI--EDLESIRVAVEASGSLDYTANLARGYVARAIKCLDAL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S ++ +L+E+ +F + R +
Sbjct: 302 PASEYRDALVELSEFAVARTH 322
>gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
Length = 331
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 136/321 (42%), Positives = 206/321 (64%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L +D+++ N +IL+++ S VE+I V +L+ SGGKRLRP+LTL TA + Y
Sbjct: 9 LARLRSLVEQDLQRTNEVILEQLNSPVELITQVGDHLLNSGGKRLRPILTLVTAKLFGYQ 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ D H LLA +EFIHTATLLHDDVVD S RRG+ A VWGN+ +LVGDFL S++F
Sbjct: 69 KADVHALLAAVVEFIHTATLLHDDVVDKSNTRRGQATANSVWGNKAPILVGDFLFSRSFQ 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+++E L +S ++EGE+ QL S +L EE YL VI+ KTA LF++A ++
Sbjct: 129 IMVEHGDLRVLRIVSDCCAIISEGEVMQLVASNDLATDEERYLDVIRHKTASLFASASQL 188
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + + Q + YGM LG A+Q+VDD+LDY E ++GKN+G+DF+ GK TLPVI
Sbjct: 189 GAVVADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEKLGKNVGDDFQEGKITLPVI 248
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
AF+ G E+ FW+ + D + + A ++ ++ +L T +A + KAK +L
Sbjct: 249 HAFRSGDAEEQAFWRRCLEDEEQDESSFDHARALIAKHGSLDYTMSQARALIVKAKAALA 308
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP+S+ +++LM++ D + R
Sbjct: 309 PLPESAERQALMDLADLSVDR 329
>gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
Length = 336
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 178/322 (55%), Positives = 228/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYA 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA ++EF+HTATLLHDDVVD+S LRRG+++AR+VWGN+ SVLVGDFLL QAF M
Sbjct: 75 GEGHVKLAASVEFMHTATLLHDDVVDESELRRGRLSARMVWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVLGGRPKAEQTAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + GKI +L A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGNDVEREFWVRALEQGKIGDNDLNHAIGLMTKHRALEDTLNRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPPSPMKGALEQVVAFCLARSH 336
>gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 351
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 167/323 (51%), Positives = 228/323 (70%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y
Sbjct: 29 LTDLVRLVADGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYG 88
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 89 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 148
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S AL+ LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV
Sbjct: 149 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEV 208
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ + + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++
Sbjct: 209 GPVLSQRPEAEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 268
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA +RG+ E+ FW+ T+ + +L++A I+R +RAL +T RA+ YG A+++L
Sbjct: 269 LALRRGSDEERAFWRRTLEREDLGEGDLEQALAILRRHRALDETIERAHHYGMMAREALA 328
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P+ K +L++VVDFC+ R +
Sbjct: 329 PFPNGPMKSALLQVVDFCIARAH 351
>gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
Length = 323
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 131/322 (40%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM VN LI ++ S+V ++ + Y++ SGGKR+RPML + A L Y
Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSEVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F +
Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++
Sbjct: 123 MVGLGKMQIMQILADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I + AL YGM+LG AFQLVDDVLDY + N++GKNIG+D GKPTLP+I
Sbjct: 183 AIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNADANQLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G + + I +E+L++ +++ AL T +A KA L
Sbjct: 243 AMQHGNAHQTQLIRDAIEHSN-GMEHLEEILSTLKQTNALEFTMQKAELEADKAIACLDF 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K +L+ + + R +
Sbjct: 302 LPESEYKHALVSLARIAVDRDH 323
>gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 331
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 131/324 (40%), Positives = 196/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAENFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A ++ I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGGEREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S + ++L+ + + R
Sbjct: 307 LAVLPESEYTQALISLAYLSVDRS 330
>gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp.
novicida U112]
gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
novicida FTE]
gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112]
gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
novicida FTE]
Length = 325
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 132/325 (40%), Positives = 197/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
Length = 323
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLANASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + I G L+ M++ +L T RA KA +L+
Sbjct: 243 AMRNGTSEQEAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + +QR
Sbjct: 302 LPESEYRLALEGLAHIAVQR 321
>gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum
SCRI1043]
gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum
SCRI1043]
Length = 323
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y
Sbjct: 3 LEQITTLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++G + + + I +G L+ M++ +L T RA KA ++L+
Sbjct: 243 AMRQGNAEQSSLIRQAIEEGN-GRHLLEPILAAMQQCGSLDYTRQRAEEEADKAINALQL 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + ++ +L + +QR
Sbjct: 302 LPKTPYRMALEGLAHLAVQR 321
>gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
Length = 332
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 201/322 (62%), Gaps = 2/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +M +VN +I R+ S+ IP+V +L+ +GGKR+RPM+TLA A M Y
Sbjct: 12 DRLAKALADEMAQVNDMIRARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++S+LVGD+L ++AF +
Sbjct: 72 GPYHINLAATVEFIHTATLLHDDVVDESSQRRGRATANLLWDNKSSILVGDYLFARAFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +S L+ LS + T+AEGE+ Q++ +++L+ E YL V++ KTA LFSAA EV
Sbjct: 132 MVEAESLTVLDILSNASATIAEGEVLQMTAAQDLETDEATYLKVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA +AL +G LGI+FQ+VDD+LD +GKNIG+DFR K TLPVI
Sbjct: 192 GVIANAPAEHTKALFDFGDALGISFQIVDDLLD-YDGSLAIGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FW TI GK + + A +++++ L T A + KAK SL
Sbjct: 251 AVAMADAEERAFWVKTIEKGKQDDGDFEHALSLLKKHDTLNATRTEALEWRDKAKASLSI 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P S + L+++ D+ + R++
Sbjct: 311 IPQSELRDMLLDLADYVVARIS 332
>gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 319
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 133/318 (41%), Positives = 195/318 (61%), Gaps = 1/318 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301
Query: 301 LPDSSWKKSLMEVVDFCL 318
LPD+ W+++L+ + +
Sbjct: 302 LPDTPWREALIGLAHIAV 319
>gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 331
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 131/324 (40%), Positives = 196/324 (60%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR
Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M
Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A ++ I + E + IM E+++L RA QKA D+
Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGGEREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVDA 306
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S + ++L+ + + R
Sbjct: 307 LAVLPESEYTQALISLAYLSVDRS 330
>gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
Length = 326
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 127/324 (39%), Positives = 191/324 (58%), Gaps = 6/324 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML----E 58
+ D+ + +VN I+ ++ SD+ +I + Y+I +GGKRLRP+L L A +
Sbjct: 5 QIHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASAELDK 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ D + +A IEFIHT+TLLHDDVVD+S +RRGK A WGN SVLVGDFL S+AF
Sbjct: 65 PKLDQAIQMATIIEFIHTSTLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAF 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++++ S + + L+ +AEGE++QL + D TEE YL VI+ KTA LF A
Sbjct: 125 QIMVDVGSMQCMSVLAKTTNIIAEGEVQQLINCGDPDTTEESYLKVIQYKTAKLFEGAAL 184
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++IAG ++AL+ +GM +G AFQL+DDV+DY EMGK++G+D GKPTLP+
Sbjct: 185 CGAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAEEMGKSVGDDLAEGKPTLPL 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + G K + I G + LK ++ A+ T+ +A A +S+
Sbjct: 245 IFTMKHGPKDAVERVRQAILTGGLD--QLKSIINDVQNCGAIEYTQQKAQEQADLAIESI 302
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LP+S +KK+L+ + + ++R N
Sbjct: 303 APLPESDYKKALVALANASVKRRN 326
>gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
Length = 323
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y
Sbjct: 3 LEKIIELTAPDMANVNTTILNQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLADATETQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHNGTVEQAAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRRRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + +QR
Sbjct: 302 LPESEYRLALEGLAHIAVQR 321
>gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 323
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 130/322 (40%), Positives = 196/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+
Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVSSGGKRVRPMLAILAAKALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F +
Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++
Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I + AL YGM+LG AFQLVDDVLDY + ++GKNIG+D GKPTLP+I
Sbjct: 183 AIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAEQLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G++++ + I +E+L++ +++ AL T +A +KA L
Sbjct: 243 AMQHGSEQQTLLIRDAIEHSN-GMEHLEEILTALKQTNALEFTMQKAELEAEKAIACLDF 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L +S +K++L+ + + R +
Sbjct: 302 LAESDYKQALISLARIAVDRDH 323
>gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
Length = 336
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 178/322 (55%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYS 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M
Sbjct: 75 GEGHVKLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVLGGRPKAEETAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E+ FW + +G+I +L A +M ++RAL DT RA YG A D+L
Sbjct: 255 AFRRGNDVEREFWVRALEEGRIGDSDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPPSPMKSALEQVVAFCLMRSH 336
>gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
Length = 323
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +
Sbjct: 123 MTSLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + I G L+ + M++ +L T RA KA +L+
Sbjct: 243 AMRNGTPEQETMIRQAIEQGS-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + +QR
Sbjct: 302 LPESEYRLALEGLAHIAVQR 321
>gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittII]
gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittII]
Length = 323
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 183 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 243 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 302 LPESEYKQALISLAYLSVDR 321
>gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20]
gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae RdAW]
gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd
KW20]
gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae RdAW]
gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866]
Length = 329
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 322
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 268/321 (83%), Positives = 295/321 (91%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MKMLE LT+KDM KVN LI+ RICS+V +IPDVVKYLIFSGGKRLRPMLT+ATALMLEYR
Sbjct: 1 MKMLEALTVKDMNKVNLLIMDRICSNVTIIPDVVKYLIFSGGKRLRPMLTVATALMLEYR 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+NHVLLACAIEFIHTATLLHDDVVDDSALRRGK AARLVWGNQ SVLVGDFLLSQAF M
Sbjct: 61 GNNHVLLACAIEFIHTATLLHDDVVDDSALRRGKAAARLVWGNQASVLVGDFLLSQAFSM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
VIETKSQEAL+ LSLVACTL+EGELRQLS+SKNL+VTEEDYL+VIKSKTA LF AALEVS
Sbjct: 121 VIETKSQEALKVLSLVACTLSEGELRQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVS 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
SLI+G Q+SVR ALKSYG NLGIAFQLVDD LDYRGEVNEMGKNIG+DFRNGKPTLPVIL
Sbjct: 181 SLISGAQDSVRDALKSYGTNLGIAFQLVDDALDYRGEVNEMGKNIGDDFRNGKPTLPVIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AFQR T +EKNFW+STI DG+ISVENL+KA I+++E ALVDT+ +AY YGQKAKDSL+
Sbjct: 241 AFQRATNQEKNFWRSTIGDGEISVENLQKALIMIQECNALVDTKSQAYYYGQKAKDSLQD 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ WK SL+EVVDFCLQRL
Sbjct: 301 LPNNPWKASLIEVVDFCLQRL 321
>gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittHH]
gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae R3021]
gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittHH]
gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae 22.4-21]
gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
Length = 323
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 183 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 243 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 302 LPESEYKQALISLAYLSVDR 321
>gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
Length = 329
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct]
Length = 360
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 30 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 89
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 90 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 149
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 150 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 209
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 210 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 269
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 270 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 326
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 327 IDFLPDSEYKQAMILLCDLAVNRKN 351
>gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810]
Length = 329
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 127/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +KK+L+ + + R
Sbjct: 308 LPESEYKKALISLAYLSVDR 327
>gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
Length = 358
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM+KVN IL ++ SDV +I + Y+I SGGKR+RPM+ A L Y+
Sbjct: 38 IKTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHSGGKRIRPMIANLAAKALNYQ 97
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H+ A IEF+HTATLLHDDVVD+S +RRG A +GN SVLVGD++ +++F M
Sbjct: 98 DNKHITCAAFIEFLHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDYMHTRSFQM 157
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ +S +AEGE++QL ++ D TE++Y+ VI SKTA LF + +
Sbjct: 158 MTELGSLRILQVMSAATNVIAEGEVQQLMNVRDPDTTEQNYMKVIYSKTARLFEVSTQTV 217
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A ++ + L++YG LG AFQLVDD+LDY +GKNIG+D GKPTLP++
Sbjct: 218 AILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSANAATLGKNIGDDLAEGKPTLPLLH 277
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ ++ I G + + L + IM E+++L A QKA D+L
Sbjct: 278 AMRHGNPQQAELIRNIILQGG-NRDALDEVLTIMHEHKSLDYAMEHAKQEAQKAVDALAP 336
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ +K++++ + + R
Sbjct: 337 LPDNIYKRAMISLAYLSVDR 356
>gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
Length = 333
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 151/321 (47%), Positives = 213/321 (66%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y
Sbjct: 12 DRLAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYE 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESSQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA EV
Sbjct: 132 MVEPGNLRVLNILSNAAATIAEGEVLQLTAAQDLKTTEDIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAGV QAL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLP+I
Sbjct: 192 GVIAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPLIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R + E+ FW TI G +L+ A ++ + AL DT A ++ +KAKD++
Sbjct: 252 AVARASDEERAFWVRTIEKGDQRDGDLEHALELLNAHAALEDTRTDALAWAEKAKDAMTE 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S + L+++ DF + RL
Sbjct: 312 LPQSELRDLLIDLADFVVARL 332
>gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
Length = 331
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y
Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 71 GDAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++
Sbjct: 131 MTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I
Sbjct: 191 AVLAGASTEQETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT E+ + I G + + K + AL T+ +A +KA +L
Sbjct: 251 AIAHGTNEERQLIRQAIEQGDGTQA-IDKIVAALHHCGALTYTQQKAIEESEKAIAALDV 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K++L+ + + R +
Sbjct: 310 LPDSEFKEALVSLAKISVDRNH 331
>gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae NT127]
gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae NT127]
Length = 329
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMAEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
HTCC2594]
gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
HTCC2594]
Length = 340
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 151/320 (47%), Positives = 212/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y+
Sbjct: 19 IEPMLQLTASGMNAVNTVILDRMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAELVGYQ 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF +
Sbjct: 79 GSRHHKLAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFEL 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ LS + +AEGE+ QLS + L+ +EE YL +I +KTA LF+AA +S
Sbjct: 139 MTEDGSLRVLKILSNASAVIAEGEVAQLSAQRKLETSEERYLDIIGAKTAALFAAASRIS 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +S +AL YG NLG+AFQLVDD +DY + EMGK+ G+DFR GK TLPVIL
Sbjct: 199 AVVAECDDSHERALDDYGRNLGVAFQLVDDAIDYDSDAAEMGKDQGDDFREGKMTLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG + E+ FWK I + S +L A ++ + AL DT RA + ++A D++
Sbjct: 259 AYARGNEDERAFWKDAIGGHRASDADLAHAITLIGRHNALEDTRTRARHFARRAIDAISI 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PDS ++++ E F + R
Sbjct: 319 FPDSKARQAMAEAALFAVAR 338
>gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas sp.
SM9913]
gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas sp.
SM9913]
Length = 323
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 135/322 (41%), Positives = 198/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+
Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F +
Sbjct: 63 GKDHITLATIIEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++
Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I +SV +AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I
Sbjct: 183 AIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G++ + + I +E+L + ++ AL T +A KA L C
Sbjct: 243 AMQHGSEHQTQLIRDAIEHCN-GMEHLDEILAALKHTNALEFTMKKAEQEANKAIACLDC 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L +SS+K++L+ + + R +
Sbjct: 302 LAESSYKQALISLARIAVDRDH 323
>gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
Length = 322
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 120/322 (37%), Positives = 194/322 (60%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M++ + L +D++ + + + SDV +I + Y++ SGGKR+RP+L L A + Y
Sbjct: 1 MQLAQTLLKEDLQHIESCFRQYLTSDVPLIRQMSDYILASGGKRIRPVLLLLCARLSGYN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++ LA IEFIHTATLLHDDVVD + LRRG+VAA + WGN +VLVGD+L ++ F M
Sbjct: 61 GEHRYPLASVIEFIHTATLLHDDVVDGATLRRGQVAANVTWGNDIAVLVGDYLFARCFEM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + ++ L+ +A+GE+ QL S +L + EE YL V++SKTA LFSA +
Sbjct: 121 MVDFCDRRIMQVLANTTSLMAQGEVVQLINSGDLSLDEERYLSVVRSKTAALFSATCRCA 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + + L +GM+LG+AFQLVDD LDY + NE GK +G D GK TLP+I
Sbjct: 181 AILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVADQNESGKLLGRDLAEGKMTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ + G++ E+L ++ + T+ +A SY ++A L+
Sbjct: 241 SLRHCQGEERQQVSGILAKGQLHAEDLAFVQNLINRYDGIGYTQRQADSYVKQACLRLQG 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
PDS +++L+E+ + + R +
Sbjct: 301 FPDSPARQALVELAESAVHRRS 322
>gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
Length = 322
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G
Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+
Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+
Sbjct: 184 ALCRAGEEQAEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT+ + + I G ++L+ + AL T A Y +A L L
Sbjct: 244 MRDGTEEQAALVRKAIQQGGS--QDLESVCAAVEAAGALDYTANLARDYAARAIACLESL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PD+ ++ +L+E+ +F + R +
Sbjct: 302 PDNEYRAALVELSEFAVARTH 322
>gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
Length = 340
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y
Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV
Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++
Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGSSAALGKNVGDDFREGKITLPIV 257
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L
Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P K +L++VVDFC+ R +
Sbjct: 318 PFPPGPMKAALLQVVDFCIARAH 340
>gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
Length = 325
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 132/325 (40%), Positives = 197/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDQIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325
>gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G
Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+
Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+
Sbjct: 184 ALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT+ + + I G ++L+ + AL T A Y +A L L
Sbjct: 244 MRDGTEEQAALVRKAIQQGGS--QDLESVCAAVEAAGALDYTANLARDYAARAIACLDTL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PD+ ++ +L+E+ +F + R +
Sbjct: 302 PDNEYRSALVELSEFAVARTH 322
>gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
Length = 327
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 128/326 (39%), Positives = 181/326 (55%), Gaps = 7/326 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + VN IL ++ S++ +I + Y+I +GGKRLRP+L L A
Sbjct: 4 NSIHAVVNTEFNLVNDHILSQLKSEIPLIEQIGYYIISNGGKRLRPLLVLMAARACGNAD 63
Query: 62 -----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
DN V +A IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S+
Sbjct: 64 ASNYQDNMVKMATIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSR 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
AF +++E S + ++ L+ ++EGE++QL + +EE YL VI+ KTA LF A
Sbjct: 124 AFQIMVEVGSMQCMQILAETTNIISEGEVQQLINCGDPSTSEESYLKVIQYKTAKLFEGA 183
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+++A +QAL YG +G AFQL+DDV+DY EMGKN+G+D GKPTL
Sbjct: 184 ALCGAIVANANKEQQQALADYGTYVGTAFQLIDDVMDYTSTAEEMGKNVGDDLAEGKPTL 243
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P+I + + I G + E L ++ A+ TE A Q A D
Sbjct: 244 PLIYTMKHAPTEAAQRVRQAIETGGL--EQLDTIIADVQACGAIEYTEKAAQEQAQLAID 301
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L LPDS +K +L+++ + + R N
Sbjct: 302 VLAPLPDSVYKTALIDLANASVNRRN 327
>gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2]
gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1]
gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
Length = 322
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G
Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+
Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+
Sbjct: 184 ALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT+ + + I G ++L+ + AL T A Y +A L L
Sbjct: 244 MRDGTEEQAALVRKAIQQGGS--QDLESVCAAVEAAGALDYTANLARDYAARAIACLDTL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PD+ ++ +L+E+ +F + R +
Sbjct: 302 PDNEYRSALVELSEFAVARTH 322
>gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y+I GGK +RPM+ + +A L Y+
Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKHIRPMIAVLSARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GSLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAASQAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I +G L+ M++ +L T RA KA +L+
Sbjct: 243 AMHNGTPEQAQMIRKAIEEGN-GRHLLEPVLAAMQQTGSLEWTRKRAEEEADKAIAALQA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ W+ +L + +QR
Sbjct: 302 LPETPWRSALEALAHMSVQR 321
>gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
IAM 12614]
gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
IAM 12614]
Length = 338
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 166/322 (51%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DL M +VN LIL + S+VE+IP++ K+LI SGGKRLRPMLTLA A M Y+
Sbjct: 17 IQPLVDLVSGGMGEVNELILSKAGSNVELIPEIAKHLISSGGKRLRPMLTLACADMFGYQ 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M
Sbjct: 77 GDGHVTLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL LS + +AEGE+ QL +KN+ TE DYL VI++KTA LF+AA EV
Sbjct: 137 MVDVGSLEALRILSTASAVIAEGEVLQLGAAKNIATTEADYLRVIEAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +++A ++YGM LG AFQLVDD LDY G ++GK++G+DFR GK TLPV+L
Sbjct: 197 PVIAGQSAEMKRAARTYGMELGYAFQLVDDALDYGGSSADLGKDVGDDFREGKITLPVVL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A RGT +++FW+ + +I +L++A ++ + AL +T RA YG KA +L
Sbjct: 257 AVARGTDADRDFWRRCLEGEEIQDGDLEQAIELLNKYDALSETIERAKDYGNKALAALDT 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP + +L + V FC+ R++
Sbjct: 317 LPSGAHSDALGDAVAFCISRVS 338
>gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
Length = 344
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 148/320 (46%), Positives = 208/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YR
Sbjct: 23 LHRLAVVLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYR 82
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +
Sbjct: 83 GERHIHLAACVEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFEL 142
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV
Sbjct: 143 MVEDGSLDVLRILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVG 202
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A ++V AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++
Sbjct: 203 GVVADRDSAVCGALAGYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLV 262
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ G E+ FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L
Sbjct: 263 AYAAGDGPERAFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALAT 322
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD + +ME D+ + R
Sbjct: 323 LPDDPLRALMMEAADYAVSR 342
>gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 144/322 (44%), Positives = 198/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y
Sbjct: 3 LNAIRQLADSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GESHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E KS E LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++
Sbjct: 123 MTELKSLEVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+A V+ AL YG LG AFQL DD+LDY E E+GKNIG+D GKPTLP+I
Sbjct: 183 GLLAESSEEVQTALAEYGKFLGTAFQLTDDLLDYTAETEELGKNIGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G+ EK + I G + E+++ ++ AL TE RA KA +L
Sbjct: 243 AMANGSDTEKALIREAIEKGDGT-EHIEVILSALKSCGALEYTEQRAIEESNKAIAALNI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K +L+ + +QR +
Sbjct: 302 LPESEYKTALVSLAKIAVQRNH 323
>gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 320
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L DM V+ +I ++ S+V ++ V +Y++ SGGKRLRP L + +A Y
Sbjct: 1 MENFNQLLAADMASVDQVIRNKLHSEVVLVNQVAEYIVNSGGKRLRPALVVLSAHAFNYT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M
Sbjct: 61 GEHHHELAAVVEFIHTATLLHDDVVDESGLRRGRETANALFGNAASVLVGDFLYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ L+ +AEGE+ QL + DV E+Y+ VI KTA LF AA+ +
Sbjct: 121 MVEVGSMRVMQTLADATNVIAEGEVLQLLNCNDADVDAENYMRVIHYKTAKLFEAAMRLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + A +YGM+LG AFQL+DDVLDY + GK++G+D GKPTLP+I
Sbjct: 181 AILAKTSSEDEAAAATYGMHLGTAFQLIDDVLDYSADEAATGKHLGDDLAEGKPTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q GT ++ +S I +G V I+ + AL T +A + A +++
Sbjct: 241 AMQHGTAQQAAVVRSAIEEG--DVGKFADVLKIIHDTGALDFTRLQAMREVELACAAIKG 298
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +K LME+ F R +
Sbjct: 299 LPASKYKTCLMELAHFAATRQH 320
>gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
Length = 336
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 177/322 (54%), Positives = 228/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDRLVALVADDMAGVNTTILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYT 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAASEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + + A +S+GMNLGIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVIANRPKAEQTASRSFGMNLGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG E++FW T+ G+++ +L A +M ++RAL DT RA YG A D+L
Sbjct: 255 AFRRGNDVERDFWIRTLERGEVADADLDHAIGLMTKHRALDDTMQRAQHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R N
Sbjct: 315 FPSSPMKSALEQVVAFCLARSN 336
>gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
Length = 323
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 196/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 183 AIVAGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 243 AMRHGNAQQAALIREAIEQGGK-REAIDEVLTIMTEHKSLDYAMNRAKEEAQKAVDAIEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 302 LPESEYKQALISLAYLSVDR 321
>gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
Length = 340
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y
Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV
Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++
Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L
Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQEALAILSRHRALDDTIERAHHYGDQARAALE 317
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P K +L++VVDFC+ R +
Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340
>gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida 3523]
Length = 325
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 131/325 (40%), Positives = 195/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIIDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EEDY+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEDYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I ++++ K I +G+ + + +++ + A+ + A Y AK
Sbjct: 244 TIYTLANVNQQQQQILKKAIENGEY---AIDEIIAMVKNSGAVDYSYKIACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D ++R N
Sbjct: 301 IDFLPDSEYKQAMILLCDLAVKRKN 325
>gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 319
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 127/317 (40%), Positives = 189/317 (59%), Gaps = 2/317 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++
Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + I G + E+L+ + AL T A Y +A L L
Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301
Query: 302 PDSSWKKSLMEVVDFCL 318
P S ++ +L+E+ +F +
Sbjct: 302 PPSEYRDALVELSEFAV 318
>gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 336
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 179/322 (55%), Positives = 231/322 (71%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y
Sbjct: 15 IDGLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTGYA 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHVKLAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVLADRPKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG+ E+ FW ++ G+IS +L A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGSDSERAFWIKSLERGEISDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPASPMKTALEQVVAFCLARSH 336
>gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
Length = 327
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 132/322 (40%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L DM VN LI ++ SDV +I + Y++ GGKR+RPMLT+ A Y+
Sbjct: 7 IKAIQALAQSDMAAVNDLIYDQLQSDVALINQLGIYIVNGGGKRMRPMLTVLAARAFAYQ 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ +A IEFIHTATLLHDDVVD+S +RRG+ A ++GN SVLVGDFL +++F M
Sbjct: 67 GDKHLEIAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVLVGDFLYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ LS +AEGE+ QL + TEE Y+ VI KTA LF AA ++
Sbjct: 127 MTKLGDMRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IA + QA+ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++
Sbjct: 187 AVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + ++ K I G ++NL+ M E +L T+ +A KA +L
Sbjct: 247 AMKHGNEAQQKLIKEAIELGN-GMDNLELILQAMEETGSLRYTQKQAEIEADKAIKALNV 305
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS K++L+ + R +
Sbjct: 306 IADSEHKQALISLAHIAANRSH 327
>gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 317
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 135/316 (42%), Positives = 194/316 (61%), Gaps = 1/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+G+ H
Sbjct: 1 NELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAH 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+
Sbjct: 61 VTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSL 120
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++A
Sbjct: 121 GSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILA 180
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A +
Sbjct: 181 GCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRH 240
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
GT + ++ I G L+ M +L T RA KA +L+ LPD+
Sbjct: 241 GTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDT 299
Query: 305 SWKKSLMEVVDFCLQR 320
W+++L+ + +QR
Sbjct: 300 PWREALIGLAHIAVQR 315
>gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Sagittula stellata E-37]
gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Sagittula stellata E-37]
Length = 325
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 148/322 (45%), Positives = 209/322 (64%), Gaps = 2/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + +M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA+A + Y
Sbjct: 5 ERLAADLVAEMAAVNDLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 65 GPYHVHLAATVEFIHTATLLHDDVVDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ET + L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA EV
Sbjct: 125 MTETGNLRVLRILSDAAATIAEGEVLQLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +AL YG LGIAFQ+VDD+LDY G GKN+G+DFR K TLP+I
Sbjct: 185 GVIAGRPEEDVRALFDYGDALGIAFQIVDDLLDYWGGDA-TGKNVGDDFRERKLTLPLIK 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF + EK FWK I G +L++A ++ + AL +T A ++ ++AK +++
Sbjct: 244 AFAKADDAEKAFWKRVIEKGDQREGDLEEALRLLERHGALEETRQEALAWAERAKTAMQK 303
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S + L+E+ D+ + R+N
Sbjct: 304 LPSSGLRDLLIELSDYVVSRVN 325
>gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 323
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 193/321 (60%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +LT +DME VN I R+ S++ +I +V+Y++ SGGKR+RPM+TL TA L Y+
Sbjct: 3 IDQISELTEQDMEDVNSEIRTRLASEITLINKLVQYIVDSGGKRIRPMITLLTARALCYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
HV +A IEFIHTATLLHDDVVD S +RRG+ +++GN SVLVGDF+ ++AF M
Sbjct: 63 KTQHVTIATLIEFIHTATLLHDDVVDKSHMRRGRKTTNIIFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E +S L ++ +A GE+ QL+ + +T + Y+ +I SKTA LF A + S
Sbjct: 123 MTELESLRILSLMADAVNIIAAGEILQLTHCNDPTITIDSYMKIIYSKTARLFEVASQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL++YG +GIAFQLVDDVLDY GKN+G D GK TLP++
Sbjct: 183 AILADANTCQEKALRNYGRYMGIAFQLVDDVLDYSASETIFGKNVGNDLNEGKLTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T ++ + +I +G L M ++ +L T RA + +KA L
Sbjct: 243 AIHHSTSKQASLIIQSIKEGN-HRHLLNIILDTMHQHGSLEYTRKRAETEIKKAISCLDI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S ++++L + + +QR+
Sbjct: 302 LPPSPYRQALASLATYTVQRI 322
>gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
Length = 360
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 145/322 (45%), Positives = 214/322 (66%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +L L D+++VN +I++R+ S + +IP + ++I +GGKRLRP+LTLA+A + Y
Sbjct: 37 LDVLLTLVGGDLKRVNEIIVERMHSPIALIPQLAGHIIAAGGKRLRPLLTLASARLCGYE 96
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H LA +EFIHTATLLHDDVVD+S LRRG+ +A +WGN+ SVLVGDFL S++F +
Sbjct: 97 GERHAQLAACVEFIHTATLLHDDVVDESLLRRGRDSANALWGNKASVLVGDFLFSRSFEL 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L LS + +AEGE+ QL + ++ TE YL VI+ KTA LF+AA +
Sbjct: 157 MVEDGVLKVLGILSHASRVIAEGEVAQLITANDMATTEAQYLEVIRGKTAQLFAAACRIG 216
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL +YGM LGIAFQLVDD LDY ++GK +G+DF +GK TLPVIL
Sbjct: 217 AVVAERPEAEEEALDTYGMTLGIAFQLVDDYLDYSARQQDLGKTVGDDFMDGKITLPVIL 276
Query: 241 AFQRGTKREKNFWKSTINDGKIS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A+QRGT E+ FW+ + ++ ++L KA +M L +T RA YG++A+ +L
Sbjct: 277 AYQRGTDDERAFWRRCMEAQDMAEPEKDLAKAIELMTRYGTLAETVERARHYGERARSAL 336
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
D K +L +VDFC++R
Sbjct: 337 DIFADGPAKAALAGIVDFCIER 358
>gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
Length = 358
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 190/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L DM+K N IL ++ S+V +I + Y+I SGGKR+RPM+ + A L Y
Sbjct: 38 IETIQQLIQLDMQKTNEAILAQLNSNVALINQLGYYIIQSGGKRIRPMIAILAARALGYT 97
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF +
Sbjct: 98 SDEPITCATFIEFIHTATLLHDDVVDESELRRGNPTANAEFGNAASVLVGDFIYTRAFQL 157
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA S
Sbjct: 158 MTQLNSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCS 217
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG LG AFQLVDD+LDY +GKN+G+D GKPTLP++
Sbjct: 218 AILAKATAAQEKALQDYGRYLGTAFQLVDDILDYSSNAQTLGKNLGDDLAEGKPTLPLLH 277
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + I G + L IM E+++L RA QKA D++
Sbjct: 278 AMHNGNPEQAKLIRDAIEQGGK-RDILDTVLAIMAEHKSLDYAMNRAKEEAQKAVDAIAL 336
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ +K++L+ + ++R
Sbjct: 337 LPENEYKQALISLAYLSVERT 357
>gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
Length = 340
Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 170/323 (52%), Positives = 228/323 (70%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y
Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S AL+ LS A +AEGE+ QL+ +KN++ +E +YL VI+ KTA LF+AA EV
Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSENEYLAVIRGKTAELFAAACEV 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++
Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L
Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P K +L++VVDFC+ R +
Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340
>gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
Length = 340
Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y
Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV
Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++
Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L
Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P K +L++VVDFC+ R +
Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340
>gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 325
Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 132/325 (40%), Positives = 195/325 (60%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y
Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M
Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-- 178
++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E
Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
V SL + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP
Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + + R N
Sbjct: 301 IDFLPDSEYKQAMILLCGLAVNRKN 325
>gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 318
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 133/315 (42%), Positives = 194/315 (61%), Gaps = 1/315 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + ++ I G L+ M +L T RA KA +L+
Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301
Query: 301 LPDSSWKKSLMEVVD 315
LPD+ W+++L+ +
Sbjct: 302 LPDTPWREALIGLAH 316
>gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
Length = 331
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ ++ +M +VN LI +++ SDV +I + Y+I SGGKR+RP++T+ A L
Sbjct: 11 IKTIQRISATEMNQVNKLITEQLSSDVALINQLGFYIINSGGKRIRPLITVLAAKALGIH 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IEFIHTATLLHDDVVDDS LRRGK A V+G+ SVLVGDFL +++F M
Sbjct: 71 DQNTTKLAAIIEFIHTATLLHDDVVDDSDLRRGKKTANAVFGSAASVLVGDFLYTRSFQM 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ + ++ LS +AEGE+ QL + D TE+ Y+ +I KTA LF AA ++
Sbjct: 131 MTQLRNLKVMDILSSATNIIAEGEVLQLMNCNDPDTTEKKYMDIIYFKTAKLFEAATQLV 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + AL +YG LG AFQL DDV+DY + +EMGKN G+D GKPTLP++
Sbjct: 191 AVLGEQSEEIETALLNYGKYLGTAFQLTDDVMDYNSDASEMGKNTGDDLAEGKPTLPLLY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G K++ K I G +++ + + + AL + RA KA +L
Sbjct: 251 AIQHGNKKQATLIKEAIKKGN-GMDHFDEIMQALHDTNALEYAKKRALEEADKAIKALVI 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K++L+ + R +
Sbjct: 310 IPDSEYKQALISLAHIAADRKS 331
>gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
Length = 333
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA M Y
Sbjct: 12 EQLARHLDSKMAAVNTLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYG 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +
Sbjct: 72 GAFDVHLAATVEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L+ LS A +AEGE+ QLS +++L E YL V++ KTA LFSAA EV
Sbjct: 132 MVEPGNLRVLDILSNAAAVIAEGEVLQLSAARDLKTDENIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + +AL YG LGIAFQ+VDD+LDY+G+ N GKN+G+DFR K TLPVI
Sbjct: 192 GVIADAPEAQIKALFDYGDALGIAFQIVDDLLDYQGDSNATGKNVGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW TI G+ +L+ A +++++ AL T A S+ KAK ++
Sbjct: 252 AVAAADETERAFWIRTIEKGRQEDGDLQHALDLLKKHGALEATRQDALSWAAKAKSAMDA 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + + L ++ D+ + R+N
Sbjct: 312 LPDHAVRGMLTDLADYVVARVN 333
>gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
Length = 323
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 183 AIVAGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA DS+
Sbjct: 243 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +KK+L+ + + R
Sbjct: 302 LPESDYKKALISLAYLSVDR 321
>gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
Length = 323
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 136/322 (42%), Positives = 199/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI ++ SDV +I + Y+I GGKR+RP+LT+ A ++Y+
Sbjct: 3 LNAIRQLADSDMQDVNKLIYSQLESDVALINQLGFYIINGGGKRMRPLLTILAARAIDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + LE L+ LAEGE+ QL + D +EE+Y+ VI KTA LF AA ++
Sbjct: 123 MTELGSMKVLEMLADATNVLAEGEVLQLMNCNDPDTSEENYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A ++ AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT++E+ + I G + + + + + + AL T RA KA ++L C
Sbjct: 243 AIANGTEKEQALIRKAIELGDGT-QYIDEILTALNKCGALEYTLNRALEESDKAIEALSC 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K++L+ + ++R +
Sbjct: 302 IPDSDYKQALISLAKIAVERNH 323
>gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 322
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 122/324 (37%), Positives = 189/324 (58%), Gaps = 4/324 (1%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L L D V+ +I ++I S V ++ + Y+I +GGKRLRP+L L +
Sbjct: 1 MQSLSMRALVADDFIAVDEIIRQQIQSKVALVQTIGDYIISAGGKRLRPLLVLLGGRAVG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
Y ++ +LA IE +HTATLLHDDVVD S LRRG+ A WGN SVLVGD+L S++F
Sbjct: 61 YHKEDLRILAATIELLHTATLLHDDVVDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M++ + ++ LS +AEGE QLS +++ +EE Y+ +I+SKT+VL A+
Sbjct: 121 EMMVGLGNMPVMKILSQATRIMAEGEALQLSRVRDVSTSEETYMQIIRSKTSVLLEASSH 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++A + R AL+ +G +LGIAFQL+DDVLD+RG+ +GKNIG+D GKPTLP+
Sbjct: 181 SAAVLASATDYERHALRGFGEHLGIAFQLIDDVLDFRGDSQALGKNIGDDLAEGKPTLPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + G + I +G +++ + L T +A+ + A L
Sbjct: 241 IFTMREGNAESAKLIHNAILEGGS--PDIEAIRSAVETAGGLEYTANKAHEHALLACHHL 298
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LPDS ++++L ++ F + R +
Sbjct: 299 DALPDSPYRQALHDLSHFAVARSH 322
>gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
Length = 322
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 132/322 (40%), Positives = 195/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM +V+ +I +++ S+V +I V +Y+I SGGKRLRP L + +A Y
Sbjct: 3 IERIRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINSGGKRLRPALVILSAGAFGYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA +EFIHTATLLHDDVVD S LRR K A ++GN SVLVGDFL S+AF M
Sbjct: 63 GQYHYNLAAIVEFIHTATLLHDDVVDASELRRSKATANALFGNAASVLVGDFLYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + + L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA +
Sbjct: 123 MVEVDNMRVMRVLADATNTIAEGEVLQLLNVRDPDVDEENYLRVIRYKTAKLFEAATRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + +A+ YGM+LG AFQL DD+LDY G+ E GKN+G+D GKPTLP+I
Sbjct: 183 AILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGDYQETGKNLGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G+ + +S I G + ++++ AL RA + + A + +
Sbjct: 243 AMKTGSGAQAQIIRSAIERG--GEGGFQPVLEVIQQTGALDYARQRAQAESETASNMISS 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS +K+ L+++ F + R +
Sbjct: 301 LPDSDYKQCLLDLSTFAVARNH 322
>gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336]
gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336]
Length = 330
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+
Sbjct: 10 IHAIQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQ 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF +
Sbjct: 70 GDEPITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + +
Sbjct: 130 MTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++
Sbjct: 190 AITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLH 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + I G + L IM E ++L +A QKA DS+ C
Sbjct: 250 AMRNGTPQQSALIREAIEQGGK-RDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISC 308
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ +K++L+ + ++R
Sbjct: 309 LPENQYKQALISLAYLSVER 328
>gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus
NJ8700]
gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase)
[Aggregatibacter aphrophilus NJ8700]
Length = 323
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 MNAIQALSHADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLIAVLAARALGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GPQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IAG + QAL+SYG LG AFQLVDDVLDY V +GKN+G+D GKPTLP++
Sbjct: 183 AIIAGSNEAQEQALQSYGRYLGTAFQLVDDVLDYSANVKALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G +++ + I G E + + IM E+++L RA QKA D+++
Sbjct: 243 AMHHGNEQQAALIREAIEQGGK-REAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 302 LPESEYKQALISLAYLSVDR 321
>gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
Length = 347
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 204/320 (63%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L +D+E N I+ R+ S V++IP + +LI +GGKRLRP+L LA A + YR
Sbjct: 26 LTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLCGYR 85
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL ++AF +
Sbjct: 86 GQRHVGLAACVEFIHTATLLHDDVVDESDLRRGQASANAIFGNKASVLVGDFLFARAFQL 145
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S E L+ L + T+AEGE+ QL + + TE YL VI+ KTA LF+AA V
Sbjct: 146 MTADGSLEVLDILCGASATIAEGEVLQLVIQNDTSSTEAQYLEVIEGKTAALFAAATRVG 205
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL++YG N GIAFQLVDD LDY E +GK +G+DFR GK TLPV+L
Sbjct: 206 AVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQERLGKTVGDDFREGKITLPVLL 265
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF RG + EK FW+ + + + +L A +M +RA+ DT RA YG A L
Sbjct: 266 AFARGDETEKTFWRRVLEEKRQEEGDLAHALSLMHRHRAIEDTIARARHYGDLALQGLAP 325
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
D K++L VV+FC+ R
Sbjct: 326 FADGPEKQALAGVVEFCIAR 345
>gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
Length = 329
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA DS+
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +KK+L+ + + R
Sbjct: 308 LPESDYKKALISLAYLSVDR 327
>gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
proteobacterium HTCC2255]
gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
proteobacterium HTCC2255]
Length = 329
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 150/322 (46%), Positives = 208/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L L DM KVN LI KR+ SD IP+V ++LI +GGKRLRP+LTLA A M
Sbjct: 8 DQLASLLNHDMVKVNSLIKKRMASDAAPRIPEVTEHLIDAGGKRLRPLLTLAAAEMCGNT 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L S++F +
Sbjct: 68 SPYHIHLAATVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNQSSVLVGDYLFSRSFQL 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET + L+ L+ + T+AEGE+ QL++++NL TE+ YL VI+ KTA LF AA +V
Sbjct: 128 MVETGNLRVLDILANASATIAEGEVLQLTVAQNLSTTEDTYLKVIRGKTAALFGAACKVG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+I+ + + AL SYG LG+ FQ+ DD+LDY G ++GK+IG+DFR K +LP+I
Sbjct: 188 GVISNAEEKIIDALASYGDALGVCFQITDDLLDYNGSSADLGKSIGDDFRERKMSLPLIK 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ EK FWK TI G ++L A +M ++ AL DT A + +KAK S+
Sbjct: 248 VLKKSDVTEKEFWKRTIEKGDQQDDDLDFALKLMTKHNALKDTHNDAKFWAEKAKKSISI 307
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S + L E+ DF + RL+
Sbjct: 308 LPKSKLRNILTELPDFVVNRLS 329
>gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase)
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 329
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 196/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MK ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 MKAIQALSHGDMQKVNESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++
Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G ++ + I G + IM E+ +L RA QKA D+++C
Sbjct: 249 AMHHGNAQQAALIRKAIEQGGRRDA-IDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K +L+ + + R
Sbjct: 308 LPESEYKLALISLAYLSVDRT 328
>gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
SW]
gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
SW]
Length = 340
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 155/320 (48%), Positives = 213/320 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L D+ VN IL R+ S VE+IP + Y++ GGKRLRP+LTLA A + Y+
Sbjct: 19 LEALIALVADDLNAVNEQILSRMHSSVELIPQLGGYIVAGGGKRLRPVLTLAAAQLCGYQ 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G LA +EF+HTATLLHDDVVD+S LRRG+ +A V+GN+ SVLVGDFL ++AF +
Sbjct: 79 GTRQTALAACVEFLHTATLLHDDVVDESDLRRGQASANAVFGNKASVLVGDFLFARAFQI 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L L + +AEGE+ QL+ + + D TEE YL VIK+KTA LF+AA E+
Sbjct: 139 MVEDGSLDVLRILCTASAVIAEGEVLQLTTTNDTDTTEEAYLEVIKAKTAELFAAACELG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL+SYGMNLGIAFQLVDDVLDY +GK IG+DFR GK LPV+L
Sbjct: 199 GIVADRPAVEQAALRSYGMNLGIAFQLVDDVLDYSAVQARLGKTIGDDFREGKINLPVVL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG + E+ FW+ T+ D +L+ A +M + AL D+ RA YG A+D+L
Sbjct: 259 AFRRGDEEERQFWRRTMEDLDQRDGDLEHAIALMTRHNALHDSVERARHYGAVARDALEM 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S K +L++V+DF + R
Sbjct: 319 FPNSRIKHALLDVIDFVVSR 338
>gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
Length = 335
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D+ VN LI R+ S IP+V +L+ +GGKR+RPMLTLA A + Y
Sbjct: 12 DRLSAALKDDLTAVNTLIRARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLACARLCGYS 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L ++AF +
Sbjct: 72 GDDHVKLAATVEFIHTATLLHDDVVDESEQRRGRPTANLLWDNQSSVLVGDYLFARAFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L+ LS A T+AEGE+ QL+++ N++ EE YL VI+ KTA LF AA EV
Sbjct: 132 MVEPGNLRVLDILSNAAATIAEGEVLQLTVASNIETPEETYLQVIRGKTAALFEAACEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDD--VLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+IAG + QAL +YG LG+AFQ+ DD ++ KNIG+DFR K TLPV
Sbjct: 192 GVIAGRDTFIIQALATYGDGLGVAFQMADDLLDWGGVDGGAQLDKNIGDDFRERKMTLPV 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A E+ FW TI G +L++A +++ + L T A + +AK +L
Sbjct: 252 IRAIAAANGDERAFWARTIGKGDQRDGDLEQALDVLQRHGTLASTRDAANDHVARAKAAL 311
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LPD + L ++ D+ + RLN
Sbjct: 312 TNLPDDPLRDMLADLADYVVARLN 335
>gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 318
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 161/317 (50%), Positives = 226/317 (71%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DL M VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+G HV
Sbjct: 2 DLVAPGMADVNELILSKAGSNVDLIPEIAKHLISSGGKRLRPMLTLAFADMFGYQGSGHV 61
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M+++T
Sbjct: 62 ILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDTG 121
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S EAL LS + +AEGE+ QL SKN++ TE +YL VI++KTA LF+AA EV IAG
Sbjct: 122 SLEALRILSEASAIIAEGEVLQLGASKNIETTEAEYLRVIEAKTAALFAAAAEVGPEIAG 181
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ +R+A ++YG+ LG AFQ+VDD LDY G ++GK++G+DFR GK TLPV+LA RG
Sbjct: 182 QNDVMRKAARTYGLELGYAFQMVDDALDYGGSSADLGKDVGDDFREGKITLPVVLAVARG 241
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T +++ FWK + ++ ++L +A ++++ A+ +T RA +YG A +L LP +
Sbjct: 242 TDQDRAFWKRCMEGDNVTDDDLAEAIELLKKFDAIAETVQRARTYGDNALKALDQLPACA 301
Query: 306 WKKSLMEVVDFCLQRLN 322
+L + V FC+ R++
Sbjct: 302 HTDALADAVAFCIARVS 318
>gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
Length = 322
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D V+ +I K++ S V ++ + Y+I +GGKRLRP+L L L
Sbjct: 4 QAFYRVVADDFSAVDGIIRKQLTSRVPLVETIGDYIISAGGKRLRPLLVLLCGNALGKCD 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LLA AIEF+HT+TLLHDDVVDDS LRRG+ + +WGN SVLVGDFL ++ F M+
Sbjct: 64 ERMRLLAAAIEFLHTSTLLHDDVVDDSELRRGRSTSNALWGNAPSVLVGDFLYARCFEML 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF AA ++
Sbjct: 124 VELASMPVMRIMSQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEAASHGAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG + +AL+ +G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 184 SLAGATSEQAEALRCFGDSLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT + + I G I E+L + AL T RA + ++A L L
Sbjct: 244 MREGTPGQAALVRRAIQKGGI--EDLTAIVAAVEAAGALDYTARRAREHAERAIACLDTL 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P ++ +L+E+ F + R +
Sbjct: 302 PPGEYRDALVELSRFAVARTH 322
>gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII]
gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+]
gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 323
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 187/320 (58%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + +
Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++
Sbjct: 183 AILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ M +LV T RA KA +L
Sbjct: 243 AMHNGTPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + + R
Sbjct: 302 LPESDYRLALEGLAHISVHR 321
>gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 339
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 166/322 (51%), Positives = 225/322 (69%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L M +VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y
Sbjct: 16 LNDLVALVADGMARVNTTILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACAQLCGYA 75
Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G + V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF
Sbjct: 76 GATEGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAF 135
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M++E S AL+ LS A +AEGE+ QL+ +KNL+ E YL VI+ KTA LF+AA E
Sbjct: 136 RMMVEVGSLRALDILSAAATVIAEGEVMQLTNAKNLETDEAAYLAVIRGKTAELFAAACE 195
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++AG + + A +SYGMNLGIAFQL+DDVLDY G E+GKN+G+DFR GK TLP+
Sbjct: 196 VGPVLAGRPEAEQAAARSYGMNLGIAFQLIDDVLDYGGTSAELGKNVGDDFREGKITLPI 255
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+LA++R ++ E+ FW+ T+ G+I +L+ A +++ + AL +T RA+ YG +A+ +L
Sbjct: 256 VLAYRRASEGERGFWRRTLQQGEIGETDLETALDLLQRHGALEETVARAHHYGAEARAAL 315
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
PD K +L+ V+FC+ R
Sbjct: 316 DIFPDGPVKAALIGAVEFCVAR 337
>gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
Length = 322
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +DM+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A
Sbjct: 3 LAFIKSCIAQDMQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA +EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M
Sbjct: 63 NARHHELAAVVEFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ +S +E L+ +AEGE+ QL + D+T+E YL VI KTA LF AA +
Sbjct: 123 MVGVESMRVMEVLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++
Sbjct: 183 AIICAASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLI 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I +G + L + E AL A + D+++
Sbjct: 243 AMRLGTTAQAQTIRKAIEEGGLD--ELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQH 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS +++L+++ +F + R
Sbjct: 301 LPDSPSRQALLKLAEFAVDRT 321
>gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE]
gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittEE]
Length = 323
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 3 IDEIQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 63 GANSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 123 VAQLESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 183 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 243 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 302 LPESEYKQALISLAYLSVDR 321
>gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846]
Length = 329
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GANSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++
Sbjct: 189 AIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G ++ + I G E + + IM E+++L RA QKA D++
Sbjct: 249 AMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEI 307
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +K++L+ + + R
Sbjct: 308 LPESEYKQALISLAYLSVDR 327
>gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 338
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 125/321 (38%), Positives = 194/321 (60%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L ++E+V+ I +++ S VE+I ++ YLI SGGKRLRP+LT+A++ + Y+G
Sbjct: 18 EELRSAYQSEIEEVDSFIKEKLSSHVELIGEMSSYLIQSGGKRLRPLLTIASSELFGYQG 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ LA +E IH ATLLHDDV+D S RRGK +WGN+ S+L GD+LL + F ++
Sbjct: 78 DRHIKLAACVELIHNATLLHDDVIDKSDFRRGKKTNNNLWGNKNSILTGDYLLGRCFEIM 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S E L+ LS V+ +A+GE+ QL K ++ E+ YL +I SKT+ LF+A++ V
Sbjct: 138 VEDGSLEVLKLLSSVSSEIAQGEILQLQHEKEVETLEKTYLEIIGSKTSSLFAASMRVGG 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I + ++AL S+G NLGI FQ+ DD+LDY + GK IG DF GK TLP+I+
Sbjct: 198 CINDKSKNEKEALTSFGFNLGICFQITDDILDYYSDKIAFGKVIGNDFYEGKVTLPIIML 257
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+Q+ ++ E+ K + + E L +M + + + + RA + + DSL
Sbjct: 258 YQKSSESERLALKEMFVRKERTKEELAYTLNLMTKYQVIASCKKRAEHFSSVSADSLGIF 317
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S K L E+ + + R+N
Sbjct: 318 PESKEKTRLQELAFYIVNRIN 338
>gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum
JL354]
Length = 340
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 148/320 (46%), Positives = 208/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y
Sbjct: 19 IDAMLSLTASGMNAVNTVILDRMQSEIPLIPSLAGHLISGGGKRLRPMLTLAGAELVGYN 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF +
Sbjct: 79 GTRHHKLAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFEL 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L+ LS + +AEGE+ QL+ + + +E+ YL +I SKTA LF+AA ++
Sbjct: 139 MTEDGSLKVLKILSSASAIIAEGEVAQLTSQRKITTSEQRYLDIIGSKTAALFAAASRIA 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A ++ QAL YG NLGIAFQLVDD LDY + EMGK+ G+DFR GK TLPVIL
Sbjct: 199 AVVAECSDAEEQALDDYGRNLGIAFQLVDDALDYSSDAAEMGKDRGDDFREGKMTLPVIL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG E+ FW++ I + S E+L A ++ + + T RA + Q A D+L
Sbjct: 259 AYARGDAEERKFWEAAILGHRTSDEDLAHAVSLVERHDCVTATRERARHFAQMAADALSI 318
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD +++++E F + R
Sbjct: 319 FPDGKAREAMVEAAHFAVAR 338
>gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
Length = 332
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 145/321 (45%), Positives = 203/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML +M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 DMLAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYS 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GDNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ Q++ + +L EE YL V++ KTA LFSAA +
Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEEIYLQVVRGKTAALFSAATQAG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI G+ +L A +M + L T + A + KA+D+L
Sbjct: 251 AVAQATAEERGFWVRTIEKGRQDEGDLDHALALMDKYGTLTATRHDAMDWVGKAQDALTA 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD ++ L ++ D+ + RL
Sbjct: 311 LPDDPIRQMLHDLADYVVARL 331
>gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1]
Length = 338
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 170/321 (52%), Positives = 229/321 (71%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L +LT +ME+VN LI+ + +DVEMIP++ YLI SGGKRLRPM+TLA A M Y+G
Sbjct: 18 QTLINLTKDNMERVNQLIISMVQADVEMIPEICNYLISSGGKRLRPMITLAAADMFGYQG 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ LA AIEF+HTATLLHDDVVD+S LRRGK AR++WGN+ SVLVGDFLL QAF M+
Sbjct: 78 DGHIKLATAIEFMHTATLLHDDVVDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFKMI 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ S EAL L+ A +AEGE+ QL+ ++N++ T DYL +I +KTA LFSAA EV
Sbjct: 138 VDVGSMEALTILANAAAIIAEGEVMQLAAAQNIETTASDYLKIINAKTAALFSAAAEVGP 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IAG + R AL+ YG +LG+AFQLVDD LDY G +GKNIG+DFR GK T+PVIL+
Sbjct: 198 IIAGYGHEERLALREYGTSLGLAFQLVDDALDYSGNAEHLGKNIGDDFREGKITMPVILS 257
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ RG EK FWK + + + E+L A +M + +L DT +A YG++A D+L +
Sbjct: 258 YTRGNATEKAFWKQALENNNNNDESLVHAQHLMEKYDSLTDTIEQARIYGKQAIDALSPI 317
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
++ K + +E+VDFC+ R+N
Sbjct: 318 KENPQKNAFIEIVDFCIARIN 338
>gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
Length = 323
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 133/321 (41%), Positives = 196/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L +
Sbjct: 3 LDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M
Sbjct: 63 TEQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S ++ LS +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++
Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ ++ A++ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++
Sbjct: 183 GVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEEMGKNMGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G +++ + I G ++NL M + AL T+ +A Q+A D+L
Sbjct: 243 AMWHGNEQQTAIIREAIETGN-GMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ +S +K++L+ + ++R+
Sbjct: 302 IEESVYKEALIGLAHISVERV 322
>gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
Length = 339
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 149/321 (46%), Positives = 206/321 (64%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +LT DM KVN LI R+ S+V +IP + +LI +GGKRLRP+L +A A + E R
Sbjct: 18 VSALVNLTAADMVKVNSLITARMQSEVAVIPALADHLIAAGGKRLRPLLCVAAARLCEVR 77
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
DNH L+ A+EFIHTATLLHDDVVD S+LRRGKVAA L+WG +SVLVGDFL ++AF +
Sbjct: 78 NDNHHKLSAAVEFIHTATLLHDDVVDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFEL 137
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S AL+ LS + + +GE+ QL + +L++++ DY+ +I SKTA LFSAA E
Sbjct: 138 MVETGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQADYIEIISSKTAALFSAASESG 197
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG AL SYG+NLG+AFQ+ DDVLDY+G+ ++GKN G+DF GK TLP+IL
Sbjct: 198 AVAAGASEDKITALYSYGLNLGLAFQIQDDVLDYQGDAADLGKNAGDDFAEGKSTLPLIL 257
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q + FW TI + K + A +M + AL A +Y KA+ SL
Sbjct: 258 AMQATKGTQDAFWARTIGERKQQDGDFAMAQDLMVSSGALDQARALARAYADKARASLSL 317
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
W+ +L + + + R
Sbjct: 318 FEPGPWRTALENLALYSVDRQ 338
>gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
LSR1]
gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
LSR1]
Length = 327
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 192/320 (60%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++LT KDM VN I +++ SDV +I ++ Y+I +GGKR+RPM+ + A L Y+
Sbjct: 8 LDEVKELTAKDMATVNDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQALGYK 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ +A IEFIHTATLLHDDVVD+S LRRGK +GN SVLVGDF+ ++AF M
Sbjct: 68 GNQHITIAVLIEFIHTATLLHDDVVDNSDLRRGKATVNAQFGNAASVLVGDFIYTRAFQM 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S LE +S +A+GE++QL K+ +TEE+YL VI SKTA LF AA + S
Sbjct: 128 MTQLGSMRVLEVMSTATNMIAKGEVQQLINCKDPRITEENYLSVIGSKTAKLFEAASQSS 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL+ YG ++GIAFQL+DD+LD N GK G D GK TLP++
Sbjct: 188 AILAGANKEKELALQRYGHHIGIAFQLIDDLLD-YSPENSTGKKSGADLAEGKVTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++GT + + I +++E +L T A + KA L+
Sbjct: 247 AIEKGTPEQTALLCNAIQQDN-GRHLFTSVQQVLKEYGSLNYTRQCAKTEANKAIAELQV 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ ++ +L ++ F + R
Sbjct: 306 LPENPYRIALEKLAKFSIMR 325
>gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
Length = 324
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 195/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + Y
Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF
Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA +
Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+++AG S QAL+ YG +G AFQL+DD+LDY + + +GKN+G+D GKPTLP++
Sbjct: 183 SAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSADGDTLGKNVGDDLSEGKPTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + GT + + ++ I +G L+ M + +L T A KA +L+
Sbjct: 243 HAMRNGTPEQASLIRTAIEEGN-GRHLLETVLETMNQCGSLEWTRNAAEQEADKAIAALK 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S W+ +L + +QR
Sbjct: 302 VLPESPWRSALEALAHMSVQRT 323
>gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
17029]
gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
17029]
gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
Length = 333
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 140/321 (43%), Positives = 208/321 (64%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y
Sbjct: 12 ERLAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYE 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPYHIHLAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV
Sbjct: 132 MVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AGV + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI
Sbjct: 192 GVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW+ I G +L++A IM + A+ A + A+++L
Sbjct: 252 AVAQADAEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQ 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ ++ L ++ DF ++R+
Sbjct: 312 LPEHPLREMLHDLADFVVERI 332
>gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
Length = 336
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 146/320 (45%), Positives = 216/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM VN +I+ R+ S++ +IP + +LI GGKR+RPMLTLA+A +L YR
Sbjct: 15 LDPMIRLVADDMNAVNQVIIDRMRSEIPLIPQLAGHLISGGGKRMRPMLTLASAQLLGYR 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H +LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +
Sbjct: 75 GTSHHVLAAAVEFIHTATLLHDDVVDGSDLRRGRRTANIIWGNPASVLVGDFLFSRSFQL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S + L LS + +AEGE+ QL+ + + + EE YL +I +KTA LF+AA ++
Sbjct: 135 MVDAGSLKVLNILSGASAVIAEGEVNQLTAVRQVGLPEERYLSIIDAKTAALFAAACRIA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL++YG NLGIAFQL+DD +DY + MGK+ G+DFR GK TLPVIL
Sbjct: 195 AVVAERPEAEELALEAYGRNLGIAFQLIDDAIDYVSDAGTMGKDAGDDFREGKMTLPVIL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG + E+ FWK + + S ++ +A ++R++RA+ DT RA YG A +++R
Sbjct: 255 AYARGNEEERAFWKDAVEGRRTSDQDFTRAIALVRKSRAVDDTMARARHYGGLAIEAIRG 314
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
D K +++E V+F + R
Sbjct: 315 FADGPAKAAMIEAVEFAVAR 334
>gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
Length = 315
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 128/314 (40%), Positives = 189/314 (60%), Gaps = 3/314 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YRG H+ A
Sbjct: 1 DMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYRGKKHITAAAF 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M+ + S L
Sbjct: 61 IEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVL 120
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + ++ A +
Sbjct: 121 KVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEI 180
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++ A K K
Sbjct: 181 ETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGK 240
Query: 251 NFWKSTINDGKISVENLKKA---FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I + + L++ IM+E+++L +A QKA DSL LP+S +K
Sbjct: 241 TTQAELIRNAIENGGELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYK 300
Query: 308 KSLMEVVDFCLQRL 321
++L+ + + R
Sbjct: 301 QALVSLAYLSVDRS 314
>gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
Length = 323
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 131/322 (40%), Positives = 193/322 (59%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DM +VN LI +R+ SDV +I + +++ SGGKRLRPM+ L A Y+
Sbjct: 3 LDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHSGGKRLRPMVVLLAARACGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +HV LA IEFIHTATLLHDDVVD S +RRGK A +WGN+ SVLVGDFL ++AF M
Sbjct: 63 GKDHVQLAAIIEFIHTATLLHDDVVDGSDMRRGKQTAHTIWGNEASVLVGDFLYTRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L L+ T+A GE+ QL D+TE DY VI KTA LF A +
Sbjct: 123 MVELDSMAVLRILARATNTIARGEVMQLMNVHEPDLTEADYRQVIYRKTATLFEAGCQNG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG+ ++ +AL +YG +LG A+QLVDD LDY G+ +E+GKNIG+D GK T+P+I
Sbjct: 183 AVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGDASEIGKNIGDDLAEGKTTMPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A + G +++ + I G + ++ + + + T A ++A + L
Sbjct: 243 AMREGEPADRDLIRQAIEAGGLD--QMEAVGRAIEKTGSAEYTRRLAEVEVEQAVEQLTS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+P S W+ +L+ + + R
Sbjct: 301 AVPGSPWRDALVHLARNSISRT 322
>gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
Length = 332
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 143/321 (44%), Positives = 202/321 (62%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML +M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 DMLAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYS 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GDNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA +
Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEGIYLQVVRGKTAALFSAATQAG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI G+ +L A +M + L T + A + KA+++L
Sbjct: 251 AVAQATAEERGFWVRTIEKGRQDEGDLDHALALMDKYDTLTATRHDAMDWVAKAQNALTA 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD ++ L ++ D+ + RL
Sbjct: 311 LPDDPIRQMLHDLADYVVARL 331
>gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
Length = 338
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 149/320 (46%), Positives = 216/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT + M VN +IL R+ S+V +IP + +LI GGKRLRPMLTLA A ++ Y
Sbjct: 17 IEPMLALTAQGMNAVNQVILDRMQSEVPLIPALAGHLISGGGKRLRPMLTLAGAELVGYS 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S LRRGK AA +++GN +VLVGDFL S++F +
Sbjct: 77 GTRHHKLAAAVEFIHTATLLHDDVVDGSDLRRGKAAANIIFGNPATVLVGDFLFSRSFEL 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L+ LS + +AEGE+ QL+ + +D +E+ YLH+I++KTA LF+AA ++
Sbjct: 137 MTEDGSLKVLKILSGASAIIAEGEVDQLTAQRKIDTSEQRYLHIIRAKTAALFAAASRIA 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A Q+L YG NLG+AFQLVDD LDY + EMGK+ G+DFR GK TLPVIL
Sbjct: 197 AVVAECSEEEEQSLDEYGRNLGVAFQLVDDALDYDSDAAEMGKDRGDDFREGKMTLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG++ E+ FWK+ I + S +L +A ++ + A+ DT+ RA + Q+A D+L
Sbjct: 257 AYARGSEEEREFWKAAIAGFRTSDSDLDEAIRLIEVHNAVADTKARARHFAQRAIDALSI 316
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD ++++ + F + R
Sbjct: 317 FPDGKARRAMTQAALFAVSR 336
>gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma
proteobacterium EB000_65A11]
Length = 321
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 185/313 (59%), Gaps = 2/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D V+ LI + + V ++ ++ YLI +GGKRLRP+L L A Y+ H+ L
Sbjct: 9 VKTDFSAVDVLIKSSLVTRVPLVEEISTYLIEAGGKRLRPLLVLLAARACNYQQHQHINL 68
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A IEF+HTA LLHDDVVD+S LRRG+ WGN SVLVGDFL S+AF M++E
Sbjct: 69 ATIIEFLHTAMLLHDDVVDESDLRRGRKTVNAAWGNPASVLVGDFLHSRAFEMMVEIGDL 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+E LS T+AEGE++QL +N D TE+ Y+ VI KTA+LF AA +++AG
Sbjct: 129 RVMEILSHATNTIAEGEVQQLGNIRNPDATEQSYIEVINRKTAMLFEAASHSGAVLAGAS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+L+ YG +LG+AFQL+DD+LDY G ++GKN+G+DF GK TLP+I+A + G+
Sbjct: 189 PEQELSLQQYGCHLGVAFQLIDDILDYEGSTEQLGKNVGDDFAEGKVTLPLIVAMRNGSP 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + I G++ ++ ++ L TE A + KA L LP S +K
Sbjct: 249 EQASTVRQAILTGEV--ADIDNLLKTVKATGGLQYTEALAVAEIDKATACLEKLPSSVYK 306
Query: 308 KSLMEVVDFCLQR 320
++ ++ + + R
Sbjct: 307 DAMHDLARYSINR 319
>gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
Length = 332
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 191/321 (59%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y
Sbjct: 12 IESLRQLVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71
Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF
Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+
Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I
Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + I +G + +L+ +M E RA T+ A +KA L+
Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDLD--DLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + F + R
Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330
>gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus
str. 91001]
gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua]
gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F]
gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola]
gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1]
gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92]
gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus
str. 91001]
gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516]
gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua]
gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92]
gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F]
gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola]
gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004]
gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038]
gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 323
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+++ A L Y+
Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMISVLVARALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M
Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + +
Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++
Sbjct: 183 AILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT + + I G L+ M +LV T RA KA +L
Sbjct: 243 AMHNGTPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S ++ +L + + R
Sbjct: 302 LPESDYRLALEGLAHISVHR 321
>gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
Length = 323
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 127/322 (39%), Positives = 187/322 (58%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L
Sbjct: 3 LESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALHCE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M
Sbjct: 63 KEKHIKVAALIEFIHTATLLHDDVVDESDMRRGKATANAMYGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + D +E+DY+ VI SKTA LF A +
Sbjct: 123 MTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDTSEDDYMRVIYSKTARLFEVAAHSA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++
Sbjct: 183 AILSGATPEQEAALRDYGRYLGTAFQLIDDLLDYDSDDSTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + +S I G L M++ +L T RA KA +L+
Sbjct: 243 AMHHGVPEQSALIRSAIEQGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L +S +K +L+ + +QRL+
Sbjct: 302 LDESPYKAALVGLAHVAVQRLS 323
>gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
Length = 338
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 183/322 (56%), Positives = 241/322 (74%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT ME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y
Sbjct: 17 VQPLVDLTRNGMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASAAMFGYE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 77 GEGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DY VI++KTA LF+AA EV
Sbjct: 137 MVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYQAVIRAKTAALFAAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + R ALKSYGMNLG+AFQLVDD LDY G+V ++GKN G+DFR GK TLPVIL
Sbjct: 197 PIVAGTDKAARNALKSYGMNLGLAFQLVDDALDYGGKVADLGKNTGDDFREGKITLPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG + E+ FW+ + G+ NL+KA ++ + L DT RA YG A+D+L
Sbjct: 257 AYRRGNEAERGFWREALEGGRHDDANLEKAMGLITKYNGLSDTVARAIHYGDVARDALAP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PD WK +LM+V+DFC++R++
Sbjct: 317 VPDGVWKDALMDVIDFCIERVS 338
>gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 322
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 137/320 (42%), Positives = 189/320 (59%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM VN I +R+ S V +I + Y+I SGGKRLRP+L L +A
Sbjct: 3 LDQIRALVADDMNAVNDRIRERLQSSVVLINQLGHYIINSGGKRLRPLLVLLSARACGAG 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+ LA IEFIHTATLLHDDVVD S LRRG+ A ++GN+ SVLVGDFL S++F M
Sbjct: 63 DRRHIDLAAIIEFIHTATLLHDDVVDASELRRGRETANALFGNEASVLVGDFLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S +E L+ T+AEGE+ QL + D EE Y+ VI+SKTA LF AA +
Sbjct: 123 MVEIGSMRVMEILAHTTNTIAEGEVLQLLNCHDADTPEERYMEVIQSKTAKLFEAAARIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G SV QA+ +YGM+LG AFQL+DDVLDY EMGKN+G+D GKPTLP+I
Sbjct: 183 AVLGGQPESVEQAMAAYGMHLGTAFQLIDDVLDYGASAEEMGKNMGDDLAEGKPTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + + I G + + I++ +L T A + +A SL
Sbjct: 243 AMRVGDADQAGLIREAIEQGGRDYAD--RVLGIIQATGSLDYTRAVAAAEADRAAASLAV 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD+ +++L + F + R
Sbjct: 301 LPDTPERQALEFLARFSVTR 320
>gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase
[Rhodobacter sphaeroides 2.4.1]
gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides]
gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Rhodobacter sphaeroides 2.4.1]
Length = 333
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 140/321 (43%), Positives = 208/321 (64%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y
Sbjct: 12 ERLAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYE 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPYHIHLAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV
Sbjct: 132 MVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AGV + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI
Sbjct: 192 GVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW+ I G +L++A IM + A+ A + A+++L
Sbjct: 252 AVAQADAEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQ 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ ++ L ++ DF ++R+
Sbjct: 312 LPEHPLREMLHDLADFVVERI 332
>gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 329
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 127/327 (38%), Positives = 191/327 (58%), Gaps = 9/327 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--- 59
+ D+ + +VN IL ++ S++ +I + Y+I +GGKR+RP++ L A +
Sbjct: 5 KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64
Query: 60 ----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + V +A IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S
Sbjct: 65 LSETQLSHTVKMASIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYS 124
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF +++ S +E LS ++EGE++QL + D +EE YL VI+ KTA LF
Sbjct: 125 RAFQIMVNVGSVPCMEILSNTTNIISEGEVQQLINCGDPDTSEESYLKVIQYKTAKLFEG 184
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A +++AG ++AL++YGM +G AFQLVDDV+DY EMGK++G+D GKPT
Sbjct: 185 AALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAEEMGKSVGDDLAEGKPT 244
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP+I + G K + I G + ENL++ +R A+ TE +A A
Sbjct: 245 LPLIYTMKHGDADAKERVRQAILTGGL--ENLEQILSDVRACGAIEYTEKQAEEQADLAI 302
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+++ P+S K +L+ + + ++R N
Sbjct: 303 KAIQAFPESEHKSALIALANAAVKRRN 329
>gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
grylli]
gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
grylli]
Length = 322
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 192/321 (59%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L KD+++V+ LI + + +D+ +IP + K+LI SGGKRLRP++ L +A Y+
Sbjct: 3 LAPIVALVKKDLDEVDALINRCLYADIPLIPQLAKHLINSGGKRLRPLIALLSAKAFGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA ++E IH ATLLHDDV+D S LRRGK A +WGN SVLVGDFL S+AF +
Sbjct: 63 GKEHRRLAASLELIHGATLLHDDVIDGSVLRRGKKTANSLWGNSASVLVGDFLYSRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + L +L+ TLA+ E+ QL N+DV E L VI+ KT VLFS A E
Sbjct: 123 ISQINNSRVLTSLADATNTLAQSEVLQLINCYNVDVDEAYCLKVIQGKTGVLFSIAAEQP 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + A+ YGM+LGIAFQL+DD LDY G+ ++GK++G D GKPTLP+I
Sbjct: 183 AMLTERPEAEISAMAHYGMHLGIAFQLIDDSLDYSGDPQQLGKSLGNDLSEGKPTLPIIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q + + K+ + G + L I++ AL T A Y +K+ L
Sbjct: 243 ALQHASAEQAQLLKTALTQGDQNK--LMTIIPILQSTSALEYTRTLARHYIEKSLTYLNL 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+PDS ++++L + F ++R
Sbjct: 301 IPDSDYRQALAHLTTFAIERS 321
>gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
Length = 332
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 189/321 (58%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y
Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71
Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF
Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+
Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + ++++ ++G +LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I
Sbjct: 192 GAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + I +G + +L+ +M E RA T+ A +KA L+
Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDLD--DLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + F + R
Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330
>gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
Length = 343
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 142/321 (44%), Positives = 210/321 (65%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DM VN +I +R+ SDV +IP + ++L+ +GGKRLRP+L +A A +
Sbjct: 23 VEALVRLCADDMAAVNAIITERMQSDVAVIPALAEHLVSAGGKRLRPLLCVAAARVAGTT 82
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+H L+ A+EFIHTATLLHDDVVD S LRRGKVAA L+WG +SVLVGDFL ++AF +
Sbjct: 83 NLHHRKLSAAVEFIHTATLLHDDVVDSSQLRRGKVAAHLIWGAPSSVLVGDFLFARAFEL 142
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S +AL LS + +AEGE+ QL + ++++TE Y+ +I +KTAVLF+AA E
Sbjct: 143 MVETDSLQALGILSKASGVIAEGEVLQLMKAYDVNLTEATYIDIIAAKTAVLFAAAAESG 202
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG ++ +QAL+ YG+NLG+AFQ+ DD LDY G +GKN G+DF GK TLP ++
Sbjct: 203 AVAAGASSAGQQALRDYGLNLGLAFQIQDDALDYGGTTQSLGKNAGDDFAEGKATLP-LI 261
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T FW T++ + +L +A ++ E+ A+ T A Y QKAKD+L+
Sbjct: 262 LAVKATPEAAAFWHRTVSLRDQTDGDLAQAQALIVESGAMAKTMETARHYAQKAKDALKG 321
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
S W+ +L + D+ ++R
Sbjct: 322 FEPSDWRTALEALADYSVERT 342
>gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
Length = 332
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 191/321 (59%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y
Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71
Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF
Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+
Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I
Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASPLDKNVGDDLAEGKATLPLI 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + I +G + +L+ +M E RA T+ A + +KA L+
Sbjct: 252 YAKQQAQPAQAAHIREAIKNGDLD--DLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQ 309
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + F + R
Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330
>gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
NSW150]
Length = 322
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 122/322 (37%), Positives = 202/322 (62%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L +D E VN LI++ I S +++I D+ ++I SGGKRLR +L L + Y
Sbjct: 3 IDHLRNLVSEDFEAVNHLIIETIKSPIQLIDDIANHVIQSGGKRLRCLLVLLASRACGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H++LA IEF HTATLLHDDV+DDS LRRG+ A +WGN+ S+LVGD+L ++ +
Sbjct: 63 GKEHIMLAAMIEFFHTATLLHDDVIDDSTLRRGRDTANKIWGNKASILVGDYLFTKYLEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + ++ L +A + GE++Q S N D++ E+Y +I++KTA+LF+A+ +
Sbjct: 123 MVEVGDIDIIQLLIGIAPQMGCGEIQQFSNRHNADLSVEEYFDMIRAKTALLFAASSAIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+LI+ ++ +++A+ SYG++LG AFQL+DD LDY + +GKNIG+D GK TLP++
Sbjct: 183 ALISKSEHQIQKAMYSYGLHLGNAFQLIDDALDYCSDAQTIGKNIGDDLATGKITLPLLQ 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + ++ G + +L + E +A+ T A A D+L
Sbjct: 243 ALKHGTAEQQIKIRESLEKGTLL--HLPAILAAITETKAIEYTRDIADKEADFAIDALSI 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS++K++L+++ + R +
Sbjct: 301 LPDSTYKQALVDLARYAAHRKH 322
>gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
Length = 322
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 200/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+
Sbjct: 3 IDRIRELVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +
Sbjct: 63 GKDHISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA +
Sbjct: 123 MVEVGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILTNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G ++ + ++ G +S +L I + + A+ T+ A A +L
Sbjct: 243 ALQNGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEI 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +K++L+++ F L+R
Sbjct: 301 LPDSVYKEALVDLAKFALER 320
>gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str.
'morsitans']
gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str.
'morsitans']
Length = 323
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 131/322 (40%), Positives = 189/322 (58%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM +VN I +++ S+V +I + Y+I GGKR+RPM+ + A L Y+
Sbjct: 3 IEQITELTAQDMAEVNTAIREQLNSEVALINQLGHYIISGGGKRIRPMIAVLAARALHYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S LE +S +AEGE+ QL + D+T ++Y+ VI SKTA LF AA + S
Sbjct: 123 MTALESLRVLELMSEAVNIIAEGEVLQLMNCNDPDITIDNYMRVIYSKTARLFEAASQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 AILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + + I G L+ M + +L T A KA L C
Sbjct: 243 AMRNGTPEQAALIRQAIEQGN-GRHLLETVLKTMHQCDSLGYTRRCAEEEADKAIACLDC 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S ++ +L + +QR +
Sbjct: 302 LSPSPYRDALESLAHVAVQRDS 323
>gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b]
Length = 322
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+
Sbjct: 3 IDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +
Sbjct: 63 GKDHISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA +
Sbjct: 123 MVEVGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILTNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDATTLGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G ++ + ++ G +S +L I + + A+ T+ A A +L
Sbjct: 243 ALQNGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEI 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +K++L+++ F L+R
Sbjct: 301 LPDSVYKEALVDLAKFALER 320
>gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
Length = 323
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 132/322 (40%), Positives = 191/322 (59%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y
Sbjct: 3 LESIIELTTEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYS 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M
Sbjct: 63 GHKHTQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S
Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHAS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ YG +G AFQL+DD+LDY + ++GKN G+D GKPTLP++
Sbjct: 183 AILANATPEQEKALQDYGRYIGTAFQLIDDLLDYDADNAQLGKNTGDDLDEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G + E + I G L M+ +L T RA QKA D+L
Sbjct: 243 AMQNGNEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAQEEAQKAIDALNI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS +K +L+ + +QR +
Sbjct: 302 IEDSIYKDALIGLAYIAIQRHS 323
>gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
Length = 338
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 168/322 (52%), Positives = 222/322 (68%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L +LT DME+ N LI+ I S++EMIP++ +LI SGGKRLRPM+TLA A M Y+
Sbjct: 17 LQPLINLTKDDMERANQLIISMIKSNIEMIPEICNHLISSGGKRLRPMITLAAAHMFGYQ 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF +
Sbjct: 77 GDEHIKLATAVEFMHTATLLHDDVVDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKI 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ +S EAL LS A +AEGE+ QL+ + N++ +YL +I +KTA LFSAA EV
Sbjct: 137 MVDARSMEALAILSNAAAVIAEGEVMQLAAANNIENDISNYLKIINAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG R AL+ YG +LG+AFQL+DD LDY G+ +GKNIG+DFR K T+PVI
Sbjct: 197 PIIAGYGCEERSALRKYGTSLGLAFQLIDDALDYSGDAQHLGKNIGDDFREKKITMPVIF 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ RG EK FWK T + S E A +M + + DT A YGQ A D+L
Sbjct: 257 SYMRGNAVEKEFWKQTFKESNHSDEAFIHAQYLMEKYGCITDTIKHARIYGQHAIDALSS 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ DS K +L+EV+DFC+ R+N
Sbjct: 317 IKDSPAKSALIEVIDFCIARVN 338
>gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 329
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 197/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ L+ +DM+K+N IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 VKAIQALSHEDMQKINESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + +
Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++
Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G ++ + I G + IM E+ +L RA QKA D+++C
Sbjct: 249 AMHHGNAQQAALIRKAIEQGGRRDA-IDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +K +L+ + + R
Sbjct: 308 LPESEYKLALISLAYLSVDRT 328
>gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
Length = 336
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 179/322 (55%), Positives = 232/322 (72%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + EY
Sbjct: 15 IDGLVGLVTADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTEYA 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M
Sbjct: 75 GDGHVKLAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV
Sbjct: 135 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L
Sbjct: 195 PVLADRPKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+RG+ E+ FW ++ G+I+ +L A +M ++RAL DT RA+ YG A D+L
Sbjct: 255 AFRRGSDSERAFWIKSLERGEINDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALAL 314
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S K +L +VV FCL R +
Sbjct: 315 FPASPMKTALEQVVAFCLARSH 336
>gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
Corby]
gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
Corby]
Length = 322
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+
Sbjct: 3 IDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +
Sbjct: 63 GKDHISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA +
Sbjct: 123 MVEVGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILTNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G ++ + ++ G +S +L I + + A+ T+ A A +L
Sbjct: 243 ALQNGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEI 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +K++L+++ F L+R
Sbjct: 301 LPDSVYKEALVDLAKFALER 320
>gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
Length = 324
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 207/322 (64%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L L DM +V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A
Sbjct: 1 MNALVRLAGTDMAEVDALIIDRMQSDVPIIPKLAEHLVSAGGKRLRPLLTVAAARASGTE 60
Query: 61 GDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
GD LA A+EFIHTATLLHDD+VD S LRRGKVAA L+WG TSVLVGDFL ++AF
Sbjct: 61 GDILSPKKLAAAVEFIHTATLLHDDIVDASELRRGKVAAHLIWGAPTSVLVGDFLFARAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+++ET S AL L+ + ++EGE+ QL+ + +L++ + YL +I +KTA LF+AA E
Sbjct: 121 ELMVETDSMRALGILAQASRVISEGEVLQLTRAHDLNLDQATYLQIISAKTAELFAAAAE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ AG + AL+ YGM LGIAFQL DD LDY +GKN G+DF GK TLP+
Sbjct: 181 AGAVGAGADAAATAALRDYGMALGIAFQLADDALDYGATAEALGKNAGDDFNEGKATLPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+LA R RE +FW+ T+ G+ + E+ +A ++ + A+ T A Y +AK +L
Sbjct: 241 LLAVARTRGREDDFWERTVTKGERTPEDFARARELVVGSGAIGATLDLAGDYADQAKAAL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP S W+ +L ++ DF + R
Sbjct: 301 SVLPASDWRAALEDLADFAVSR 322
>gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 337
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 166/322 (51%), Positives = 226/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +T DM +VN LIL S+VE+IP++ ++LI SGGKRLRPMLT+A+AL +YR
Sbjct: 16 IEPMIAVTAPDMARVNDLILAMAGSNVELIPEIAEHLISSGGKRLRPMLTIASALAHDYR 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF
Sbjct: 76 GDAHVKLAASVEFMHTATLLHDDVVDESDLRRGKKTARTIWGNQASVLVGDFLLGQAFKT 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S AL+ LS + +AEGE+ QLS +K++ +E DYL VI +KTA LF+AA EV
Sbjct: 136 MVEVGSLTALDILSTASSVIAEGEVWQLSAAKHMTTSEADYLAVIDAKTAALFAAAAEVG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + R A++ YG +LG+AFQLVDDVLDY G +GKN G+DFR GK TLPVIL
Sbjct: 196 PVIAGAGEAERTAMRDYGRSLGLAFQLVDDVLDYGGTAAALGKNTGDDFREGKITLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+Q G EK FW+ + G+ + L +A ++ ++ AL +T RA YG+ A +
Sbjct: 256 AYQAGDDTEKAFWREAMEGGRNDDKALARATALIHQHGALEETVQRARQYGEAAYAAASG 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S + +++ VV+FC+ R++
Sbjct: 316 LPQSPSRDAMLGVVEFCIDRVS 337
>gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
NSW150]
Length = 322
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 198/321 (61%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L D VN LI+ +I S + +I + ++I SGGKRLRP+L L T+ Y+
Sbjct: 3 IDSIRALINDDFNAVNNLIINKIESQIGLIDKMSHHMIESGGKRLRPLLVLLTSNACGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ S+LVGD+L +Q+ +
Sbjct: 63 GQDHIDLAAMVEFFHTATLLHDDVIDESTLRRGRQTANNIWGSKASILVGDYLFTQSIEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + E L+ + A ++ GE++QL+ N +T E+Y VI++KTA+LF+AA +
Sbjct: 123 MVDINNPEVLKLFARTALEISCGEVKQLTNRHNPALTFEEYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ AL +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILSNSSKEMQNALYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q GT+ +K + ++ G + L + + E +A+ T+ A A +L
Sbjct: 243 ALQHGTEVQKQQIEESLKHGTLDF--LPEILGALEETKAIEYTKGIAAKEVNTAISNLAL 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS +K +L+E+ F L R
Sbjct: 301 LPDSKYKNALIELAQFALLRS 321
>gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
Length = 322
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 130/321 (40%), Positives = 190/321 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L D++ V K + SDV +I V +Y++ SGGKR+RPML L +A + Y+
Sbjct: 1 MHAALSLVGDDLKNVELQFRKDLESDVYLIRKVGEYVLASGGKRIRPMLLLLSAKLCGYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F +
Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E L+ +S +AEGE+ QL + +L++T+E Y+ V+KSKTAVL SAA E
Sbjct: 121 MVEAGDLRILKVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I
Sbjct: 181 AILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ + + + + + F ++ + + T A Y + K L
Sbjct: 241 TLMKCSDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGA 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
DS K +L+E+ D+ + R
Sbjct: 301 FVDSQEKAALIELADYVVNRK 321
>gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 322
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+
Sbjct: 3 IDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +
Sbjct: 63 GKDHISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA +
Sbjct: 123 MVEVGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILTNAPIELRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G ++ + ++ G +S +L I + + A+ T+ A A +L
Sbjct: 243 ALQNGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEI 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +K++L+++ F L+R
Sbjct: 301 LPDSVYKEALVDLAKFALER 320
>gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
Length = 406
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 144/321 (44%), Positives = 205/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML ++M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 85 DMLAATLSEEMAAVNTLIRTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYS 144
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 145 GDNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 204
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ Q++ + +L E+ YL V++ KTA LFSAA +
Sbjct: 205 MVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEDIYLQVVRGKTAALFSAATQAG 264
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA + AL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI
Sbjct: 265 GVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPVIK 324
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW TI G+ +L A +M + L T A ++ KA+D+L
Sbjct: 325 AVAQATAEERAFWVRTIEKGRQDEGDLDHALALMDKYDTLGATRRDAMAWVAKAQDALTA 384
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ ++ L ++ D+ + RL
Sbjct: 385 LPEDPIRQMLHDLADYVVARL 405
>gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
Length = 309
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 130/310 (41%), Positives = 190/310 (61%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL + L YRG++ LA I
Sbjct: 1 MQTVDGVIRARLHSDVVLIRQVAEYIISAGGKRLRPILTLLSGRALGYRGEHLFELAAMI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M++ T++ LE
Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMVTTRNMTILE 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ +AEGE+ QL N DV+E++YL VI+ KTA LF AA V +LIA
Sbjct: 121 VMAEATNIIAEGEVLQLLNIGNTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQV 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A+ YGM LG AFQ++DDVLDY G+ + +GK++G+D GKPTLP+I + G+
Sbjct: 181 RAMADYGMYLGTAFQIIDDVLDYSGDADTIGKSLGDDLAEGKPTLPLIYTMRNGSSEASA 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + ++ AL + A ++A SL+ +PDS +++L+
Sbjct: 241 LVRDALENANRD--RFHDVLNAVQSCGALEYAKNEAVKMAEQAIASLQSIPDSEVRQALI 298
Query: 312 EVVDFCLQRL 321
E+ + R
Sbjct: 299 ELARLSVDRS 308
>gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
Length = 332
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 189/321 (58%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L D+ V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y
Sbjct: 12 IESLRQPVQNDIAAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71
Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF
Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+
Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I
Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + I +G + +L+ +M E RA T+ A +KA L+
Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDLD--DLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + F + R
Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330
>gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
Length = 323
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 133/321 (41%), Positives = 200/321 (62%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L+ KDM+ VN +I +++ SDV +I + Y+I GGKR+RP++ + A L Y+
Sbjct: 3 LNEIQALSAKDMQAVNAMISQQLQSDVALINQLSFYIINGGGKRIRPLIAVLVANALNYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDF+ ++AF +
Sbjct: 63 GDRHITCATFIEFIHTATLLHDDVVDESTLRRGKDTANAIFGNAASVLVGDFIYTRAFQL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S ++ +S +A GE+ QL + D TE+ Y+ VI SKTA LF A E S
Sbjct: 123 MARLGSLPVMQVMSDAVNVIAAGEVLQLMNCNDPDTTEQSYMQVIYSKTARLFEVAAECS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L++ QA+K YG LG AFQL+DDVLDY +V+++GKN+G+D GKPTLP++
Sbjct: 183 ALLSEATEQQVQAMKLYGRYLGTAFQLIDDVLDYCADVDKLGKNLGDDLEEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q ++ E+ +S I G + L + +M + ++L T +A QKA DSL
Sbjct: 243 AMQHASEDERQLIRSIIEHGH-GRKYLAEVQAMMDKYQSLTYTIEKAKQEAQKAIDSLSV 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ D+ +K++L+ + ++R
Sbjct: 302 IDDNPYKEALISLAKISVERS 322
>gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
Bath]
gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
Bath]
Length = 340
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 140/317 (44%), Positives = 202/317 (63%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ L + V+ LIL+ + SDV +I + +Y++ SGGKRLRPML L +A L Y GD+
Sbjct: 24 IRRLVDGEAAAVDSLILRELHSDVVLINQIGQYIVGSGGKRLRPMLHLLSAKALGYPGDH 83
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H+ LA IEFIHTATLLHDDVVD+SALRRG+ +A +WGN SVLVGD+L S++F +++
Sbjct: 84 HITLAAVIEFIHTATLLHDDVVDESALRRGQDSANALWGNSASVLVGDYLYSRSFELMVR 143
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ LS +AEGE+ QL N E YL VI KTA+LFSAA ++++++
Sbjct: 144 VQDMRVMDILSRTTTAIAEGEVLQLLNCNNPATDEGRYLDVISRKTAILFSAAAQLAAVL 203
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++V ++LK+YG LGIAFQL DDVLDY+ + E GKN+G+D GKPTLP+I A
Sbjct: 204 AGSSHAVEESLKNYGTYLGIAFQLKDDVLDYKADPEEWGKNLGDDLAEGKPTLPLIYALS 263
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + E + I G+ E+ KK + ++ A+ TE RA KA + + LP+
Sbjct: 264 QSSGAEAELLRQAIEHGER--EHFKKVYAVIESTDAISYTERRARDAANKAIEQVTHLPE 321
Query: 304 SSWKKSLMEVVDFCLQR 320
S +K +L+ + F + R
Sbjct: 322 SGYKDALIALARFAVDR 338
>gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
Length = 332
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 191/321 (59%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y
Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71
Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF
Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+
Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I
Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + I +G + +L+ +M E RA T+ A + +KA L+
Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDLD--DLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQ 309
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + F + R
Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330
>gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 313
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 127/314 (40%), Positives = 193/314 (61%), Gaps = 2/314 (0%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+M +V+ +I +R+ S+V +I + Y++ +GGKR+RP+L L A L++ G +A
Sbjct: 2 AAEMAQVDAVIHRRLASEVALINQISHYIVSAGGKRIRPLLVLLFARALDFDGPERFEMA 61
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++
Sbjct: 62 ATVEFIHTATLLHDDVVDESDLRRGRKTANAIFGNAASVLVGDFLYSRAFQMMVSVNRLR 121
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L+ L+ +AEGE+ QL + D++ E YL VI+ KTA LF A+ +++AGV
Sbjct: 122 VLDVLADATNVIAEGEVLQLLNMHDPDISIEAYLRVIRYKTAKLFEASARTGAVLAGVSA 181
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + SYG LG AFQL+DD+LDY G ++GKN+G+D R GKPT+P++LA Q G+
Sbjct: 182 PLEDSCASYGRCLGTAFQLIDDLLDYEGATAQLGKNVGDDLREGKPTMPLLLAMQHGSST 241
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+++ + I G++ E L + I+R AL T A KA+ L LP S +K+
Sbjct: 242 QRDLIRHAIEHGEV--ERLPEIIEIVRSTGALEATRQAARDEANKARAHLSSLPSSQFKE 299
Query: 309 SLMEVVDFCLQRLN 322
+L+ + ++R +
Sbjct: 300 ALLYLCAQSVERSS 313
>gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
Length = 331
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 138/321 (42%), Positives = 207/321 (64%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y
Sbjct: 10 ERLAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYE 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +
Sbjct: 70 GPYHIHLAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA +V
Sbjct: 130 MVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATQVG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG+ + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI
Sbjct: 190 GVVAGMPEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIK 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW+ I G +L++A IM + A+ A + A+++L
Sbjct: 250 AVAQADAEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQ 309
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP ++ L ++ DF ++R+
Sbjct: 310 LPKHPLREMLHDLADFVVERI 330
>gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
Length = 320
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 122/322 (37%), Positives = 196/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + + K+++ VN +I++++ SDVEM+ +V +Y++ +GGKRLRP+L L ++ L
Sbjct: 1 MQEVRAVVSKELDAVNAVIIEQLRSDVEMVENVGQYIVDAGGKRLRPVLVLLSSAALGSI 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A +EFIHTATLLHDDVVD S LRRG+ A +GN +SVLVGDFL ++AF +
Sbjct: 61 SELQIRFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNASSVLVGDFLYTRAFQL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L+ ++ T+A GE+ QL + + +E+ Y VI KTA LF+A + +
Sbjct: 121 MVTLGNHDVLKMMADTTNTIAAGEVLQLIRAGDSSTSEDQYYDVIDRKTAALFAAGCQGA 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+AG + + L YG N+GIAFQ+VDD+LDY+G+ GKN+G+D GKPTLP+I
Sbjct: 181 ALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGDPEVTGKNVGDDLAEGKPTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G+ + + IN E L +++ +L T A S KA +L+
Sbjct: 241 VMREGSNAQATLVREAINAKDR--ERLPDIIQAVKDCGSLEYTREAAVSCRDKALGALKG 298
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+S KK+++ + L+R +
Sbjct: 299 FPESPAKKAMINLAALSLERSH 320
>gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment']
Length = 325
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 117/320 (36%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + ++ V +L+ I DVE+I ++++Y++ SGGKR+RP L L +A + Y G
Sbjct: 4 ETILSPVAPELALVEERLLQDISGDVELISEIIRYVLKSGGKRVRPALLLLSAKLCGYNG 63
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+ LA E++H ATL+HDD++D + RRG +A WG+Q SVL GDFL +++ M
Sbjct: 64 GSRHIDLAVVAEYMHAATLIHDDIIDRADKRRGLPSANSTWGSQISVLAGDFLYARSLQM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + A + + EG++R++ ++ NLD+T ++YL +I SKTA L S A
Sbjct: 124 LVIDGDLAVMRAFADATVRMIEGQVREVQMAGNLDLTYDEYLDIITSKTAALISVACRTG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+LIAG Q AL +G+++GIAFQLVDD LD+ E + +GK +G DF+ GK T P++
Sbjct: 184 ALIAGRQPEEVAALTEFGLDVGIAFQLVDDALDFVAEEDRLGKPVGNDFKEGKVTFPMLH 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G++ ++ + I +L + I+ RA+ T +Y +KAK SL
Sbjct: 244 VMRAGSEADQGRIRELAAQESIGESDLVEVKAIVERYRAVPATMELVRTYLKKAKASLSI 303
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PDS+ K+SL+ +VDF R
Sbjct: 304 FPDSAAKRSLVLMVDFVGDR 323
>gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
Length = 322
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 196/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +DM V+ +I +++ S V +I V +Y+I SGGKRLRP L + +A Y
Sbjct: 3 IEYIRSFIAQDMSIVDNVIREKLHSHVLLIRQVSEYIINSGGKRLRPALVILSAGAFGYS 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M
Sbjct: 63 GKFHYNLAAVIEFIHTATLLHDDVVDESELRRNRETANALFGNAASVLVGDFLYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + ++ L+ T+AEGE+ QL ++ V+EE+YL VI+ KTA LF AA +
Sbjct: 123 MVEVDNMRVMQVLADATNTIAEGEVLQLLNCRDPQVSEENYLQVIRFKTAKLFEAASRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + A+ YGM+LG AFQLVDD+LDY G +++GKN+G+D GKPTLP+I
Sbjct: 183 AILGNATSEEENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGKNLGDDLTEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT+ + N + I DG + ++R+ AL + A + A ++
Sbjct: 243 AMRTGTQEQANIIRKAIEDGGKDG--FQPVLNVIRQTAALEYAKKCAEAEVTTAVAAIAT 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS KK L+++ F + R +
Sbjct: 301 LPDSENKKCLLQLASFAVTRNH 322
>gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1]
Length = 333
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 140/319 (43%), Positives = 207/319 (64%), Gaps = 1/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G
Sbjct: 14 IVAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGP 73
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H+ LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++
Sbjct: 74 YHIHLAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMV 133
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
ET S ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV +
Sbjct: 134 ETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGV 193
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AGV + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A
Sbjct: 194 VAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAV 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ E+ FW+ I G +L++A IM + A+ A + A+++L LP
Sbjct: 254 AQADAEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQLP 313
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ +K L ++ DF ++R+
Sbjct: 314 EHPLRKMLHDLADFVVERI 332
>gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
Length = 322
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 124/320 (38%), Positives = 191/320 (59%), Gaps = 2/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++ DM V+ I + + S+V ++ V +Y+I SGGKRLRPML L A +
Sbjct: 4 SIIQSCINDDMRMVDTTIRQSLHSEVALVNQVAEYIINSGGKRLRPMLVLLAAGLFGEIQ 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H LA +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M+
Sbjct: 64 TQHHQLAAVVEFIHTATLLHDDVVDESSKRRGQSTANALFGNAASVLVGDFVYSRAFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++ +E LS +AEGE+ QL N D++++ YL VI KTA LF AA + +
Sbjct: 124 VAVQNMRVMEVLSNATNVIAEGEVLQLLNVNNADISDKAYLQVIHYKTAKLFEAATRLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I+ AL +YGM+LG AFQL+DD+LD G ++GKN+G+D GKPTLP++ A
Sbjct: 184 IISEASAKDEAALTAYGMHLGTAFQLIDDILDLSGNSEDIGKNLGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++ I G + E+L + I+ + AL + A + + + ++
Sbjct: 244 MRNSNTEQSQLIRNAIEQGGL--EHLTQVVEIVNNSGALDHVKKIAEAESAQCRAAIAHF 301
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+E+ DF + R
Sbjct: 302 PESKFKQALIELADFAVTRS 321
>gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
Length = 338
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 168/322 (52%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DLT KDME+VN IL S++EMIP++ +LI SGGKRLRPM+TLA+A M Y+
Sbjct: 17 LQSLFDLTQKDMERVNQFILSMAKSEIEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M
Sbjct: 77 SDGHIKLATAVEFMHTATLLHDDVIDESDLRRGKSTARMIWGNQASILVGDFLLGQAFKM 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV
Sbjct: 137 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSSSDYLKIINAKTAALFSAAAEVG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + R AL+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL
Sbjct: 197 PIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVIL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG EK FWK + DG S E A +M + ++ DT +A YG++A D+L
Sbjct: 257 AYERGNMDEKAFWKQALEDGNNSNEAFAHAQHLMEKYNSITDTIEQARVYGKRAIDALIP 316
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ ++ +L+E V+FC+ R+N
Sbjct: 317 MNENPAYNALVETVEFCIARIN 338
>gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
Length = 327
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L Y
Sbjct: 7 LEQIQALAQQDMQAVDQEILAQLNSEVPLINQLGHYIISGGGKRIRPLIAVLAANALCYT 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ A IEF+HTATLLHDDVVD+SALRRG+ A ++GN SVLVGDF+ +++F M
Sbjct: 67 GRKHLTCAAFIEFVHTATLLHDDVVDESALRRGRETANAIFGNAASVLVGDFIYTRSFQM 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S E L+ +S LAEGE++QL + TE +Y+ VI +KTA LF AA +
Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNINDPHTTEANYMRVIYNKTARLFEAATQCV 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + QALK+YG LG AFQLVDD+LDY + + GKN+G+DF GKPTLP++
Sbjct: 187 AIVAGASQQIEQALKAYGCYLGTAFQLVDDILDYSAKAEQFGKNVGDDFVEGKPTLPLLH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q + + + + I G + IM E+++L RA QKA +L
Sbjct: 247 ALQHANEAQASMIREAIEHGG-ERAKIPMVLAIMAEHKSLEYAMARAKQEAQKAVAALDI 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L D+ +KK+L+ + + R
Sbjct: 306 LADTEYKKALISLAYLSVDR 325
>gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 322
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 201/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+
Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVALVRQVSEYIIHSGGKRLRPALVILAAGLFDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M
Sbjct: 63 GLHHHNLAAVVEFIHTATLLHDDVVDESELRRNQATANALFGNAASVLVGDFLYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA +
Sbjct: 123 MVEVGNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAARLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + +AL +YGM+LG AFQLVDD+LDY G + GKN+G+D GKPTLP+I
Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGKNLGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + G + + + I G + I++E+ AL + A + A ++
Sbjct: 243 AMRSGIPEQVDTVRHAIETGGKDG--FEPILKIIQESGALDYAKQCAQNEANMAISAITA 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ DS +K+ L+E+ +F + R
Sbjct: 301 IRDSIYKQCLLELAEFAITR 320
>gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 330
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L +DM+K N IL ++ SDV +I + Y+I SGGKR+RPM+ + A L +
Sbjct: 10 IDDIQKLIHRDMQKTNETILAQLNSDVTLINQLGYYIIQSGGKRIRPMIAILAARALGFH 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + A IEFIHTATLLHDDVVD+SALRRG A +GN SVLVGDF+ ++AF +
Sbjct: 70 GEQPITCATFIEFIHTATLLHDDVVDESALRRGNPTANAEFGNAASVLVGDFIYTRAFQL 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA +
Sbjct: 130 MTQLDSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL+ YG LG AFQLVDD+LDY + +GKNIG+D GKPTLP++
Sbjct: 190 AILAHATEAQENALREYGCYLGTAFQLVDDILDYSADAQALGKNIGDDLAEGKPTLPLLH 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + + I G + L+ IM E+++L RA QKA D++
Sbjct: 250 AMHHGNPAQAKLIREAIEQGGK-RDILEDVLTIMTEHKSLDYAMMRAKQEAQKAVDAIAL 308
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ +K++L+ + + R
Sbjct: 309 LPENEYKQALISLAYLSVDR 328
>gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
Length = 333
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 141/321 (43%), Positives = 204/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y
Sbjct: 12 ERLAAWLAGDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYE 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPYHIHLAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV
Sbjct: 132 MVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AGV + AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI
Sbjct: 192 GVVAGVPEAQVAALHAYGDALGIAFQIVDDLLDYGGADAQIGKNTGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW+ I G +L +A IM + A+ A + A++SL
Sbjct: 252 AVAKADAEERAFWQRVIEKGDQREGDLAQAHAIMARHGAMEAARQDALHWVAVARESLTQ 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ + L ++ DF ++R+
Sbjct: 312 LPEHPLRDMLHDLADFVVERI 332
>gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
Length = 334
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 130/319 (40%), Positives = 198/319 (62%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L D+ V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A YRG +
Sbjct: 18 LIQPIAADLNAVDTVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANAYGYRGTD 77
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M++
Sbjct: 78 HHQLAAVVEFIHTATLLHDDVVDESSLRRGRKTANALFGNAASVLVGDFLYSRAFQMMVS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ L+ +AEGE+ QL + DV+EE Y VI+SKTA LF AA ++ +LI
Sbjct: 138 VGDIRIMQILADATNVIAEGEVLQLLNMHDPDVSEERYTQVIRSKTAKLFEAAAQLGTLI 197
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + +A YG +LG AFQL+DDVLDY G+ +++GKN+G+D R GK TLP+I +
Sbjct: 198 AGASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGKNVGDDLREGKATLPLIYLME 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT ++ +S I +G ++ + + AL T+ +A +A S+ LPD
Sbjct: 258 HGTPEQRELVRSCIENG--DEQHFDAVLQAVTTSGALDYTKRKAEEASARATASIAGLPD 315
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+++K +L+++ F + R +
Sbjct: 316 NAFKDALLKLSAFAVNRNH 334
>gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
Length = 323
Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G
Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TTLGSLRILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G+ + + + I +E L +M+E +L T +AY KA L L
Sbjct: 244 MHNGSPEQASMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PDS +K++L + ++R +
Sbjct: 303 PDSEYKQALTTLAHLAVKRTS 323
>gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617]
Length = 324
Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + Y
Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF
Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA +
Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + GT + + +S I +G L+ M + +L T A KA +L
Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALG 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S W+ +L + +QR
Sbjct: 302 VLPKSPWRTALEALAHMSVQRT 323
>gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
Length = 324
Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 128/313 (40%), Positives = 195/313 (62%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ +VN +I K + SDV +I + Y+I +GGKRLRP++T+ + Y GD LA
Sbjct: 14 EDLSRVNEVINKAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKSVGYDGDKLYALAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQLMVDSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAAAQVGAILGNAPPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G+K+
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSKQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + + + S +K + + AL + A ++A SL LPDS K++
Sbjct: 254 ADDVRHALENADRSS--FQKIHDYVVRSDALTYSISEARKAVEQAVASLAVLPDSEVKQA 311
Query: 310 LMEVVDFCLQRLN 322
++++ + L R++
Sbjct: 312 MIQLAEESLARVS 324
>gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
2300/99 Alcoy]
gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
2300/99 Alcoy]
Length = 322
Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+
Sbjct: 3 IDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +
Sbjct: 63 GKDHISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA +
Sbjct: 123 MVEVGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PILTNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G ++ + ++ G +S +L I + + A+ T+ A A +L
Sbjct: 243 ALQNGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALGI 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +K++L+++ F L+R
Sbjct: 301 LPDSVYKEALVDLAKFALER 320
>gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
Length = 327
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 175/324 (54%), Gaps = 5/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
++ +++ ++M + S V ++ + Y++ GK++RPM A ++
Sbjct: 5 IEQIKEPIAQEMAAFEDKFRDSMSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLVSEG 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 65 LVQERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL- 177
+ I+ + L +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A
Sbjct: 125 LLSIDNGDFDLLRIISVAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCA 184
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +A + V + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP
Sbjct: 185 MGACSVAPENSQVIEQMRLFGEYVGMAFQIKDDLFDYT--EEAIGKPTGIDIKEQKMTLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+I T++++++ ++I + + +K+ ++ + + T+ + Y KA
Sbjct: 243 LIYTLNMVTEKDRHWLINSIKNHNTDKKRVKEVIAFVKAHGGIDYTQEKMKEYQAKALAI 302
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L PDS +KK+L+++V + ++R
Sbjct: 303 LDRFPDSPYKKALLQIVTYVIERT 326
>gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
Tucson]
gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
Tucson]
Length = 333
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y
Sbjct: 13 LEQITALTAQDMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYE 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 73 GNKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ KS L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 133 MTSLKSLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMQVIYSKTARLFEAAAQSS 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 193 AILSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSANGSTLGKNTGDDLNEGKPTLPLLH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G + +++ + I G L+ M++ +L T RA KA +L+
Sbjct: 253 AMHHGDEAQRSMIREAIEQGNR-RHLLEPVLQAMQQCASLEYTHNRAEEEANKAIAALQA 311
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S ++ +L + +QR
Sbjct: 312 LPKSPYRDALEGLARLAVQR 331
>gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
Length = 378
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 215/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L M +VN +IL R+ S + +IP++ +LI GGKRLRPMLTLA A ++ Y
Sbjct: 57 LDPIMNLVADGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRLRPMLTLACADLVGYA 116
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S +RRG+ A ++WGN SVLVGDFL S++F +
Sbjct: 117 GARHYKLAAAVEFIHTATLLHDDVVDGSGMRRGRKTANIIWGNSASVLVGDFLFSRSFEL 176
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +S + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S
Sbjct: 177 MVEAESLKVLKILSGASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRIS 236
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVIL
Sbjct: 237 AVVADRSEAEEQALDVYGRNLGIAFQLIDDAIDYESDEATMGKDAGDDFRDGKVTLPVIL 296
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG++ ++ FWK+ I ++S +L A ++R+ A+ DT RA YGQ+A D+L
Sbjct: 297 AYARGSEADRAFWKAAIAGHRVSDADLAHATGLLRQTGAIADTLARARHYGQRAIDALGM 356
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
K +L E V+F + R
Sbjct: 357 FDAGRAKAALTEAVEFAIAR 376
>gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
Length = 324
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 128/313 (40%), Positives = 196/313 (62%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ +VN +I + + SDV +I + Y+I +GGKRLRP++T+ A + Y GD LA
Sbjct: 14 EDLSRVNEVINQAVQSDVALISQIGTYIISAGGKRLRPIMTILAAKSVGYDGDKLYALAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQLMVDSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAAAQVGAILGNAAPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G+K+
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSKQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + + + S +K + + AL + A ++A SL LPDS K++
Sbjct: 254 ADDVRHALENADRSS--FQKIHDYVVHSDALTYSISEARKAVEQAVASLAVLPDSEVKQA 311
Query: 310 LMEVVDFCLQRLN 322
++++ + L R++
Sbjct: 312 MIQLAEESLARVS 324
>gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 323
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 132/321 (41%), Positives = 199/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L +
Sbjct: 3 LDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M
Sbjct: 63 TEQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S ++ LS +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++
Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPNTTEESYMEVIYSKTARLFEAATLLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ A++ YG LG AFQLVDD++DY + +MGKN+G+D GKPTLP++
Sbjct: 183 AVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEDMGKNMGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A G +++ + I G ++NL M + AL T+++A Q+A D+L
Sbjct: 243 AMWHGNEQQAAMIREAIESGN-GMDNLTLILEAMEQTNALGYTKHQALKASQQAVDALAP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P+S +K++L+ + ++R+
Sbjct: 302 IPESHYKQALIGLAHVAVERV 322
>gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
Length = 333
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 144/323 (44%), Positives = 216/323 (66%), Gaps = 1/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L DM++VN LI +R+ S IP+V +L+ +GGKRLRPML LA A + Y
Sbjct: 11 LDRLSAELAGDMDRVNALIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLVLAAARLCGY 70
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G++H+LLA A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F
Sbjct: 71 AGESHILLAAAVEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARSFQ 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ +T+S + + L+ + T+AEGE+ QL+ ++++ TE+ Y+ +++ KTA LFSAA E
Sbjct: 131 LMADTESMQVMRILANASATIAEGEVLQLTAAQDVSTTEDTYIQIVRGKTAALFSAATEA 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++AG +V++AL YG LGIAFQ+VDD+LDY G + +GKN+G+DFR K TLPVI
Sbjct: 191 GAVVAGADPAVQRALFDYGDALGIAFQIVDDLLDYGGSTSSIGKNVGDDFRERKLTLPVI 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A R + E+ FW+ TI G+ +L A I+R AL A ++ Q+AK +L+
Sbjct: 251 KAIARADEVERAFWERTIGQGQQDEADLATALEILRRREALEAARADAIAWAQRAKAALQ 310
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
PD ++ L ++ DF + RL+
Sbjct: 311 AAPDQPLRRILADLADFVVSRLS 333
>gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163]
Length = 324
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + Y
Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF
Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA +
Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + GT + + +S I +G L+ M + +L T A KA +L
Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLGWTRNAAEKEADKAIAALE 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S W+ +L + +QR
Sbjct: 302 VLPKSPWRTALEALAHMSVQRT 323
>gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 322
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 151/320 (47%), Positives = 205/320 (64%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L L DM V+ LI R+ S+V +IP + ++LI +GGKRLRP+LT+ATA +
Sbjct: 1 MDRLVRLAAADMAGVDALITARMQSEVPVIPALAEHLIAAGGKRLRPLLTVATARLAGSD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +
Sbjct: 61 NAACLKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGAAQSVLVGDFLFARAFEL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S ALE L+ + +AEGE+ QL+ S +L++++ YL +I +KTA LF+AA E
Sbjct: 121 MVETSSMRALEILAKASRVIAEGEVLQLTRSHDLNLSQALYLEIIAAKTAELFAAASEAG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AGV +AL++YGMNLG+AFQL DD LDY G +GKN G+DFR GK TLP++L
Sbjct: 181 GVSAGVSADKSEALRAYGMNLGLAFQLADDALDYGGTTEALGKNAGDDFREGKATLPLLL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R RE FW+ I + + + ++A ++ AL T A Y KAK +L
Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIVGTGALEATLDLASEYADKAKLALAS 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + W+ SL + DF + R
Sbjct: 301 FPANDWRASLESLADFAVSR 320
>gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
Length = 324
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 192/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y +
Sbjct: 8 FQKHLSEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGRSVGYDNEK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S LE ++ +AEGE+ QL N D+TEE+Y+ VI+ KTA LF AA +V S++
Sbjct: 128 SGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEEYIQVIQYKTAKLFEAAAQVGSIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I +
Sbjct: 188 GNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMR 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G+++ N + + + S K + + AL + A A +L LPD
Sbjct: 248 QGSEQVANDVRLALENADRSY--FAKIHEYVVRSDALAYSIGEARKAVDCAIAALDTLPD 305
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S K++++ + L R++
Sbjct: 306 SEAKEAMIRLAQESLVRVS 324
>gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
Length = 356
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 166/322 (51%), Positives = 226/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L +LT DME+VN IL SD+EMIP++ +LI SGGKRLRPM+TLA+A M +Y+
Sbjct: 35 LQSLINLTKDDMERVNKFILSMAKSDIEMIPEISNHLISSGGKRLRPMITLASAHMFDYQ 94
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF +
Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKL 154
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ A +AEGE+ QLS KN++ + DYL +I +KTA LFSAA EV
Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSAVKNIETSTSDYLKIINAKTAALFSAAAEVG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + R AL+ YG LG+AFQL+DDVLDY G +GKNIG+DFR GK T+PVIL
Sbjct: 215 PIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGGTAKHLGKNIGDDFREGKITMPVIL 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG EK FWK + + + E A ++ + +L DT +A +YG++A ++L
Sbjct: 275 AYARGNTAEKAFWKQALENCNNNDETFAHAQHLIEKYDSLTDTIEQARAYGKRATNALAS 334
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ +S +L+E VDFC+ R+N
Sbjct: 335 MNESPAHSALIETVDFCIARVN 356
>gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
Length = 323
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 198/322 (61%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM+ VN LI ++ SDV +I + Y+I GGKR+RP+L++ A ++Y+
Sbjct: 3 LNAIRQLADSDMQDVNKLIYAQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M
Sbjct: 63 GVAHLKLAAIVEFIHTASLLHDDVVDESMLRRGRDTANALFGNSASVLVGDFLYTRSFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S + L+ L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++
Sbjct: 123 MTELGSMKVLKMLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A ++ AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I
Sbjct: 183 GVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A GT++E+ + + G + +N+++ + + AL T RA KA +L C
Sbjct: 243 AIAHGTEKEQALIRKAVELGDGT-QNIEEILVALNNCGALKYTHDRALEESDKAVAALAC 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K++L+ + ++R +
Sbjct: 302 IPDSEYKQALISLAKIAVERNH 323
>gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 322
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 122/320 (38%), Positives = 194/320 (60%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ +L +D+++V K + SDV +I V +Y++ SGGKR+RP + L A + EY+
Sbjct: 1 MQAALELIGEDLKQVEEQFRKDLESDVPLIRKVGEYVLASGGKRIRPAMLLLAARLCEYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + LA +EFIHTATLLHDDVVD + LRRG +A +WGN+ SVL+GDFL S++F +
Sbjct: 61 GNQAIPLASVVEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLIGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S + L +S +AEGE+ QL + +++TE+ Y+ V+++KTAVL SAA +
Sbjct: 121 MVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTEQQYIEVVRAKTAVLLSAACQCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ GV QAL +GM LGIAFQL+DD+LDY E GK+IG D GK TLP+I
Sbjct: 181 AILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEEEFGKSIGHDLEEGKLTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E+ + I +++ E+ + +++ + T +A L C
Sbjct: 241 ALRGCSDEERGAVTAIIEKDELTPEDFRLVSDLVQSYGGIEYTVEKARDCVANCARHLSC 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P +S K +L+++ ++ + R
Sbjct: 301 FPANSCKAALLDLAEYVVTR 320
>gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
Length = 345
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 177/326 (54%), Positives = 227/326 (69%), Gaps = 6/326 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR
Sbjct: 18 LNDLVALVETGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYR 77
Query: 61 G-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL
Sbjct: 78 SAEGGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLG 137
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
QAF M++E S AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+A
Sbjct: 138 QAFKMMVEVGSLRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAA 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A EV ++A S A +SYGMNLGIAFQLVDD LDY G +GKN+G+DFR GK T
Sbjct: 198 ACEVGPVLAERPKSEAAACRSYGMNLGIAFQLVDDALDYGGTSAALGKNVGDDFREGKIT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA 294
LP++L+F+RG E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A
Sbjct: 258 LPIVLSFRRGNAEERAFWRRTLEQGEIDESRDLDTAIGIMRRHRALEDTIERARHYGAIA 317
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+D+L PD+ K++L++ VDFC+ R
Sbjct: 318 RDALALFPDAPMKRALLQAVDFCISR 343
>gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
Length = 337
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 153/320 (47%), Positives = 215/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L DM +VN +IL R+ S+V +IP++ +LI GGKR+RPMLTLA +L+Y
Sbjct: 16 LDPMMTLVAADMNEVNAVILDRMQSEVPLIPELAGHLIAGGGKRMRPMLTLACGRLLDYP 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S+AF +
Sbjct: 76 GRRHCKLAAAVEFIHTATLLHDDVVDKSDLRRGRKTANVIWGNSASVLVGDFLFSRAFEV 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L+ LS + +AEGE+ QLS + ++ +E+ YL +I +KTA LF+AA +++
Sbjct: 136 MVEDGSLKVLKILSRASAVIAEGEVNQLSAQRRIETSEDQYLAIINAKTAELFAAACKIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + AL +YG NLGIAFQLVDD +DY + MGK +G+DFR+GK TLPVIL
Sbjct: 196 AVVAERDEATEAALDAYGRNLGIAFQLVDDAIDYVSDAETMGKGVGDDFRDGKVTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG+ E++FWK I K S E+L A ++R++ + DT RA YGQ+A D++
Sbjct: 256 AYARGSAEERDFWKQAITGHKTSDEDLVYATSLLRKHDTIADTLARARHYGQRAVDAIGG 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S K +L E V F + R
Sbjct: 316 FRASQAKSALTEAVAFAVAR 335
>gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str.
Houston-1]
gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str.
Houston-1]
Length = 356
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 167/322 (51%), Positives = 221/322 (68%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L +LT DME VN I SDVE+IP++ +LI SGGKRLRPMLTLA+A M Y+
Sbjct: 35 LQSLVNLTKDDMEHVNQCIFSMAKSDVEIIPEISNHLISSGGKRLRPMLTLASARMFGYQ 94
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M
Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKM 154
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ A +AEGE+ QLS +KN++ + DYL +I +KTA LFSAA EV
Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSATKNIETSISDYLKIINAKTAALFSAAAEVG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + R AL+ YG LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL
Sbjct: 215 PIIAGYGHEERLALREYGTFLGLAFQLIDDALDYGGTAKYLGKNIGDDFREGKITMPVIL 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ R EK FWK + +G + E A ++ + +L DT +A SYG+ A +L
Sbjct: 275 AYARSNAVEKTFWKQALENGNSNDETFAHAQHLIEKYDSLTDTIEQARSYGKNATHALAA 334
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ +S +L+E VDFC+ R+N
Sbjct: 335 ISESPIHNALIETVDFCIARVN 356
>gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
Length = 324
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + + LA
Sbjct: 14 DDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASTE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSEQA 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N + + + S +K + + AL + A KA SL LPDS K++
Sbjct: 254 ANDVRHALENADRSY--FEKIHDYVVNSDALPYSISEAKKAVDKAIASLDVLPDSEVKEA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLARVS 324
>gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
3043]
gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
3043]
Length = 337
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 134/305 (43%), Positives = 185/305 (60%), Gaps = 2/305 (0%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
IL ++ S V ++ + +Y+I SGGKRLRP+L L A L Y GD HV LA IEF+HT
Sbjct: 34 RTILAQLASRVPLVETIGRYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHT 93
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
+TLLHDDVVD+S LRRGK A WGN SVLVGDFL S++F M++E S +E LS
Sbjct: 94 STLLHDDVVDESHLRRGKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGSMRVMEILSGA 153
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
C +AEGE+ QL+ N D+ E Y I+ KTA+LF AA +++A + +ALK
Sbjct: 154 TCVIAEGEVLQLTNIGNPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKL 213
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
YG LG+AFQLVDD+LDY+G+ + MGKN+G+D GKPTLP+I A G + + +
Sbjct: 214 YGRYLGLAFQLVDDLLDYQGDADAMGKNVGDDLAEGKPTLPLIHAMANGNAEQVSVVRQA 273
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
I G + +L + I+ + AL T RA +A L LP+S ++ S+ +
Sbjct: 274 IRQGGLD--HLDEVLAIVHDTGALDYTRRRAEEMADRALAQLELLPESRYRDSMAALAHL 331
Query: 317 CLQRL 321
++R
Sbjct: 332 AVERQ 336
>gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
LLAP12]
gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
LLAP12]
Length = 322
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 127/321 (39%), Positives = 201/321 (62%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + + D VN LI+ +I S + +I D+ ++I SGGKRLRP+L L + Y+
Sbjct: 3 IESIRAAVIDDFNAVNALIVNKIESQIGLIDDMSHHVIESGGKRLRPLLVLLASNACSYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ H+ LA +EF HTATLLHDDVVD+S LRRG+ A +WG++ S+LVGD+L +Q+ +
Sbjct: 63 GNAHIALAAMVEFFHTATLLHDDVVDESTLRRGRETANNIWGSKASILVGDYLFTQSIEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++++ + L+ + A ++ GE++QLS N +T E+Y VI++KTA+LF+AA +
Sbjct: 123 MVDSGNPAILKLFANTALEISCGEVKQLSNRHNPALTFEEYFDVIRAKTALLFAAAACIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ V+ +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I
Sbjct: 183 PMLSDASKEVQDSLYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G++R+K ++ G S+E L + I + E +A+ T+ A A L
Sbjct: 243 ALQHGSERQKQQIIESLKKG--SLEFLPEILIALEETKAIEYTKKVAAQEIDTALSFLMV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS +K +L ++ F LQR
Sbjct: 301 LPDSKYKNALTQLAQFALQRS 321
>gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
Length = 324
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + + LA
Sbjct: 14 DDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSEQA 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N + + + S +K + + AL + A KA SL LPDS K++
Sbjct: 254 ANDVRHALENADRSY--FEKIHDYVVNSDALPYSISEAKKAVDKAIASLDVLPDSEVKEA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLARVS 324
>gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
Length = 322
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 126/321 (39%), Positives = 192/321 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L +D+ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y
Sbjct: 1 MEAALALIGEDLTNVELQFKKDLHSDVPLIRKVGEYVLASGGKRIRPALLLLSAKLCGYT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ +V LA IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GNRNVALASVIEFIHTATLLHDDVVDNANLRRGIASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + L+ LS +AEGE+ QL + +LD+T E Y+ V+K+KTA+L SAA +
Sbjct: 121 MVADGDLKILKVLSGATTIIAEGEVLQLICTSDLDLTLERYIEVVKAKTAILLSAACQSG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + AL+ +GM+LGIAFQL+DD LDY + GK+IG D GK TLP+I
Sbjct: 181 AILGQASSQHETALQEFGMDLGIAFQLMDDTLDYVASEEQFGKSIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ T E++ + I + ++ F ++ + + T A Y + K L
Sbjct: 241 TLRQCTAEERSQIGTIIEKDILEDQDFSTVFDLVGKYDGIKHTIAVANEYVNRCKGHLNV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S+ K +L ++ D+ L R+
Sbjct: 301 FPESTEKAALFDLADYVLTRV 321
>gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
Length = 334
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 136/325 (41%), Positives = 203/325 (62%), Gaps = 4/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L + DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y+
Sbjct: 9 LRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYQ 68
Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D HV LA +EFIHTATLLHDDVVD+S+LRRG +A V+GN+ SVLVGDFL ++
Sbjct: 69 PDATHQRHVGLAACVEFIHTATLLHDDVVDESSLRRGMASANAVFGNKASVLVGDFLFAR 128
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F ++ + S + + LS + T+AEGE+ Q+S +L + YL VI KTA LF+AA
Sbjct: 129 SFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDLSTRIDQYLEVIHGKTAALFAAA 188
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
V +++A +V +AL+SYG NLG+AFQLVDD LDY + +GK +G+DFR GK TL
Sbjct: 189 CRVGAVVAERDETVERALESYGTNLGMAFQLVDDALDYAADQARLGKTVGDDFREGKITL 248
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A+ G++ ++ FW+ I + E+L A ++ A+ T RA Y A++
Sbjct: 249 PVLAAYAAGSEEDRAFWQRVIERSEQQPEDLDHALQLIARTDAIRITLDRATEYADAARE 308
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L P ++ L + + + RL
Sbjct: 309 ALSIFPPGHLRQLLQDTASYTVSRL 333
>gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 322
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 137/321 (42%), Positives = 197/321 (61%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DM VN LI +R+ S+V +I + Y++ SGGKRLRP+L L A YR
Sbjct: 3 IDAIRNLAADDMAAVNRLIQERLSSEVVLIDQMGHYIVNSGGKRLRPLLVLLAARAAGYR 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++H+ LA +EFIHTATLLHDDVVD+S LRRG+ A +WGN+ +VLVGDFL ++AF M
Sbjct: 63 GEHHIKLAAVVEFIHTATLLHDDVVDESTLRRGQDTANSIWGNEAAVLVGDFLYTRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E ++ ++ T+AEGE+ QL + DV+E Y VI KTA LF AA +
Sbjct: 123 MVEVGLLPIMQVMARTTNTIAEGEVMQLLNCHDPDVSEARYRDVIYRKTASLFEAACCLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IAG+ + L +YG++LG A+QLVDD LDY G+ E+GKNIG+D GKPT+P+I
Sbjct: 183 GTIAGLPQAQTDHLAAYGLHLGTAYQLVDDALDYAGKAEEIGKNIGDDLAEGKPTMPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A RG+ E+ + I++G IS + + A+ T+ A ++A + L
Sbjct: 243 AMARGSAEERQVIREAISEGGIS--RIAAVQQAIENTGAIPYTQRLARDEAEEAVNRLAH 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS WK++L + F + R
Sbjct: 301 LPDSEWKQALEALARFSVART 321
>gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
Length = 334
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 119/320 (37%), Positives = 192/320 (60%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + D+ +++E V I K + S V ++ V +++ SGGKR+RP+ L +A + Y
Sbjct: 13 MADVWDVYREELEGVEEQIRKNLDSSVALVNTVAAHILNSGGKRVRPLFVLLSAHLCGYA 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H L +EFIHTATLLHDDVVD++ LRRG+ A VWGNQ S+LVGD+L S+A C
Sbjct: 73 GQDHQALGSLVEFIHTATLLHDDVVDEADLRRGRRTASKVWGNQISILVGDYLYSRAICQ 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ ++Q EALS +AEGE+ QL + N + E +YL +I+ KTA L +A+ ++
Sbjct: 133 IVDFRNQGINEALSEACRKMAEGEVLQLYYNGNPLMPESEYLRIIEHKTAGLIAASCKIG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G +++AL +G LGIAFQL DD LDY +GK +G+D R GK TLP++
Sbjct: 193 AIVGGATEELQEALFRFGQRLGIAFQLADDTLDYTANGEHLGKTLGQDLRQGKATLPLLH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q ++ ++ K + ++ E L++ +M+E ++ RA+++ AK L
Sbjct: 253 LLQHCSEPDRQLIKDRMETRTLTDEELRRIVGLMQEYGSIAYAMERAHAFVAAAKRDLDL 312
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
D++ K++L D+ + R
Sbjct: 313 FHDNTAKRALAIAADYMVTR 332
>gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
Length = 358
Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 166/322 (51%), Positives = 227/322 (70%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L +LT KDME+VN IL S+VEMIP++ +LI SGGKRLRPM+TLA+A M Y+
Sbjct: 37 LQSLVNLTQKDMERVNQFILSMAKSEVEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 96
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ SVLVGDFLL QAF M
Sbjct: 97 SDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV
Sbjct: 157 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSPSDYLKIINAKTAALFSAAAEVG 216
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + R +L+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVI+
Sbjct: 217 PIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVII 276
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++RG EKNFWK + DG + E A ++ + ++ DT +A YG+ A D+L
Sbjct: 277 AYERGNIVEKNFWKQALEDGNNNNEAFAYAQHLIEKYDSITDTIEQARIYGKHAIDALIP 336
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ ++ +L+E V+FC+ R+N
Sbjct: 337 MNENLAYNALVETVEFCIARVN 358
>gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
Length = 323
Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 136/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G
Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S + LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TTLGSLKILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G+ + + + I +E L +M+E +L T +AY KA L L
Sbjct: 244 MHNGSPEQTSMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS +K++L + ++R
Sbjct: 303 PDSEYKQALTTLAHLAVKRS 322
>gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
Length = 327
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 120/320 (37%), Positives = 198/320 (61%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L D++ V +LK + S+V+M+ +V Y+ SGGKRLRP+ + ++ + Y
Sbjct: 6 INEVFELLKDDIKSVEDELLKNLDSEVQMVNEVASYVFKSGGKRLRPVFLILSSKLSGYE 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ ++++ +E+IHTATLLHDDV+D + RRGK AA V+GN +VL GDFL S+AF
Sbjct: 66 GNRSIVISGVVEYIHTATLLHDDVIDGAMYRRGKKAANRVFGNDITVLCGDFLYSRAFVN 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ E L+ A T++EGE+ QL + N D+T EDYL +I SKTA+LFS+ E+
Sbjct: 126 LVKDGDPEVQMILANAAKTMSEGEVFQLVKTANFDLTMEDYLKIIFSKTAILFSSCCEIG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ R+ L+ YG +G+AFQ+ DD+LDY G+ N+ GK G D + GK TLP++L
Sbjct: 186 AVLSKSDKDKRENLREYGRLIGLAFQMSDDILDYLGDENKTGKKPGTDLKEGKMTLPLLL 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+EK K I S ++L +M+++ E SY +KAK+ L+
Sbjct: 246 LRDLIDDKEKKNLKEIILKEDPSEDDLIYIIGLMKKHNIKEKAEQFVDSYIEKAKEKLQI 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S++K++L+ + ++ ++R
Sbjct: 306 FPNSTYKEALIYLSEYVIKR 325
>gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
Length = 346
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 152/320 (47%), Positives = 216/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y
Sbjct: 25 LAPMMALVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYA 84
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +
Sbjct: 85 GSRHYKLAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFEL 144
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +S + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S
Sbjct: 145 MVEAESLKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRIS 204
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVIL
Sbjct: 205 AVVADRDEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVIL 264
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG+ E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L
Sbjct: 265 AYARGSDEERTFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGM 324
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ K +L E V+F + R
Sbjct: 325 FDNGKAKAALTEAVEFAIAR 344
>gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
HTCC2633]
gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
HTCC2633]
Length = 351
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 144/317 (45%), Positives = 211/317 (66%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L L DM V +I +R+ S IP YL+ +GGKR+RP++T+ A ML Y GD
Sbjct: 33 LATLASDDMAAVEAVIEERMASATRSIPQTADYLVAAGGKRIRPLITVTAARMLGYEGDG 92
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
HV LA A+E+IH+ATLLHDDVVD+S LRRGK A VWGN SVLVGDFL +++F M+++
Sbjct: 93 HVSLAAAVEYIHSATLLHDDVVDESELRRGKAPANTVWGNAHSVLVGDFLFARSFMMMVD 152
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S +AL LS A +AEGE+RQL+ +N+D++ ++Y+ +I +KTA LFSAA +V+ ++
Sbjct: 153 AGSMDALHVLSRAASVIAEGEVRQLAAVRNIDISRDEYMSIIDAKTAALFSAAAQVAPIL 212
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G ++ L++YG LG+AFQLVDD LDY G E+GKN G+DFR GK TLPV LA +
Sbjct: 213 YGSDKAIEDGLETYGRELGLAFQLVDDALDYGGMAAELGKNTGDDFREGKITLPVALAME 272
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ RE+ FWK I+DG+ + + +A I++++ AL T A ++ A ++L+ P
Sbjct: 273 NASARERAFWKRVISDGEQTDADFDEALAILKKHGALDATLEAARTHAANAVNALKIAPQ 332
Query: 304 SSWKKSLMEVVDFCLQR 320
+ W ++L + +F ++R
Sbjct: 333 NEWTEALAALPEFVVER 349
>gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
Length = 324
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + + LA
Sbjct: 14 DDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSEQA 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N + + + S +K + + AL + A KA SL LPDS K++
Sbjct: 254 ANDVRYALENADRSY--FEKIHDYVVNSDALPYSISEAKKAVDKAIASLDVLPDSEVKEA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLARVS 324
>gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
Length = 310
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 129/309 (41%), Positives = 185/309 (59%), Gaps = 1/309 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+GD H+ +A I
Sbjct: 1 MAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQGDKHITVAALI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ +S L
Sbjct: 61 EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLESLRVLA 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S++++ +
Sbjct: 121 LMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A + G +
Sbjct: 181 KALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLHAMRNGNSAQTA 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G L+ M++ +L T RA KA +L+ LP+S + +L
Sbjct: 241 MIREAIEQGS-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQVLPESPHRSALE 299
Query: 312 EVVDFCLQR 320
+ +QR
Sbjct: 300 GLAHLAVQR 308
>gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 312
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 171/312 (54%), Positives = 229/312 (73%), Gaps = 1/312 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACA 70
ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y GD V LA A
Sbjct: 1 MERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYGDGDGAVKLAAA 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E S AL
Sbjct: 61 VEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVGSLRAL 120
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV ++AG +
Sbjct: 121 DILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAE 180
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RGT E+
Sbjct: 181 QVACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRGTDEER 240
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
FW+ T+ ++ +L++A I+R NRAL DT RA+ YG A+++L LP+ + K +L
Sbjct: 241 AFWRRTLEREELEDGDLEQALAILRRNRALEDTITRAHHYGTMAREALAPLPNGAMKSAL 300
Query: 311 MEVVDFCLQRLN 322
++VVDFC+ R +
Sbjct: 301 LQVVDFCIARAH 312
>gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
Length = 346
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 151/320 (47%), Positives = 216/320 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y
Sbjct: 25 LAPMMALVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYA 84
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +
Sbjct: 85 GSRHYKLAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFEL 144
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +S + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S
Sbjct: 145 MVEAESLKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRIS 204
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVIL
Sbjct: 205 AVVADRDEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVIL 264
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG+ E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L
Sbjct: 265 AYARGSDEERAFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGM 324
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + +L E V+F + R
Sbjct: 325 FDNGKARAALTEAVEFAIAR 344
>gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23]
gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23]
Length = 333
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 180/321 (56%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ +
Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F +
Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++
Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI
Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + I+ G + + +R +L + RA +Y A+ +L
Sbjct: 254 AMTHSDAATCERLRMIISKGDSDA--MPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ +L + + +QR
Sbjct: 312 LPETEAVAALRGLARYAVQRT 332
>gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 333
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 138/321 (42%), Positives = 201/321 (62%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L DM VN LI +R+ S+ IP V +L+ +GGKRLRP+LTLA A + Y
Sbjct: 12 DRLAAFLAADMLAVNVLIRERMASEHAPRIPQVTAHLVEAGGKRLRPLLTLAAARLCGYG 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 72 GPFHVHLAATVEFIHTATLLHDDVVDESSRRRGRPTANLLWDNKSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + L+ L+ + ++AEGE+ QL+ +++L TE YL V++ KTA LFSAA EV
Sbjct: 132 MVEPGNLRVLDILANASASIAEGEVLQLTAAQDLATTEAIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +AL +YG LG+AFQ+VDD+LDY G +GK++G+DFR K TLPVI
Sbjct: 192 GVIAGAPADQVKALFTYGDALGVAFQIVDDLLDYGGVAATIGKDVGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW I G + +L++A ++ + AL A + A+D+L
Sbjct: 252 AVAKADAEERAFWVRVIEKGHQAEGDLEQAQALLARHGALQAARVDALHWAATARDALAV 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + L ++ DF ++R+
Sbjct: 312 LPAHPLRTMLEDLADFVVERI 332
>gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
Length = 341
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 5/326 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+ L L DM VN LI +R+ SDV +IP + ++LI +GGKRLRP+LT+A A +
Sbjct: 15 VDRLVRLAETDMAGVNRLITERMQSDVPIIPALAEHLIAAGGKRLRPLLTVAAARLAASD 74
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D+ + LA A+EFIHTATLLHDDVVD SALRRGKVAA L+WG SVLVGDFL +
Sbjct: 75 GAGSDNDHCLKLAAAVEFIHTATLLHDDVVDGSALRRGKVAAHLIWGGAQSVLVGDFLFA 134
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF +++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+A
Sbjct: 135 RAFELMVETNSMKALEILARASRVIAEGEVMQLMRSHDLNLSQALYLEIIQAKTAELFAA 194
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++ AGV + ALK+YG+NLG+AFQLVDD LDY G +GKN G+DFR GK T
Sbjct: 195 ASEAGAVSAGVDQTRADALKAYGLNLGLAFQLVDDALDYGGATETLGKNAGDDFREGKAT 254
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP++LA R RE FW+ + + + + ++A ++ AL T A Y KAK
Sbjct: 255 LPLLLAIARSGPREAEFWERAVGRREQTEADFRRARELIIGTGALDATLDLATDYADKAK 314
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L P + W++SL + DF + R
Sbjct: 315 AALAIFPANDWRESLESLADFAVSRT 340
>gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
Length = 325
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 125/321 (38%), Positives = 192/321 (59%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ ++ +M KVN LI K++ SDV +I + Y++ SGGKR+RP++T+ A L
Sbjct: 5 IKHIQQISNTEMAKVNALISKQLTSDVALIKQLGFYIVNSGGKRIRPLITILAAKALNVH 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA IEF+HTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL +++F M
Sbjct: 65 SEKITKLAAIIEFVHTATLLHDDVVDESDLRRGKKTANALFGNAASVLVGDFLYTRSFQM 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E ++ + ++ LS +AEGE+ QL + +++E+ Y+ +I KTA LF AA ++
Sbjct: 125 MSELQNLKVMDVLSRATNIIAEGEVLQLMNCNDANISEKLYMDIIYYKTAKLFEAATQLV 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++A + AL +YG LG AFQL DDV+DY EMGKN G+D GKPTLP+I
Sbjct: 185 GVLAEQTPEIELALLNYGKYLGTAFQLTDDVMDYTSNAQEMGKNSGDDLAEGKPTLPLIY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT+++K K I +++ + AL + RA KA +++
Sbjct: 245 AMKNGTEKQKALIKDAIEKAN-GMQHFDLIMETLASTNALEYAQARAQEEADKAIEAIAI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ +K++L+ + R
Sbjct: 304 LPNNQYKEALVSLAHLAANRK 324
>gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
Length = 320
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 128/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L+ L DM V+ +I R+ S+V ++ V +Y+I SGGKRLRP L L +A Y
Sbjct: 1 MENLKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINSGGKRLRPALVLLSAQAFGYG 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M
Sbjct: 61 GKHHHDLAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRSFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ ++ L+ +AEGE+ QL + V +Y+ VI KTA LF AA+ +
Sbjct: 121 MVDVGEMRVMQTLADATNVIAEGEVLQLLNCHDASVDIPNYMRVIHCKTAKLFEAAMRLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + +A YGM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I
Sbjct: 181 AILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEAQTGKHLGDDLAEGKPTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q GT + + I G V + ++R+ AL T +A + A ++
Sbjct: 241 AMQHGTGAQAAVVRDAIEQG--DVGKFTEVLTVIRDTGALEFTRQQALRETETACAAIAA 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ DS +K+ L+E+ F R
Sbjct: 299 MADSKYKQCLLELAHFAATRQ 319
>gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
Length = 333
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 104/321 (32%), Positives = 176/321 (54%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + DL D+E+V I + V+ + + +YL +GGKRLRP L L +A ++ G
Sbjct: 13 REIFDLIQDDLEQVEKKITAESVASVDAVTAIGQYLQSAGGKRLRPALLLLSAKLVGNGG 72
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + L +E IH ATL+HDDV+D + RRG+ + + WGN T VL GD+L QAF +
Sbjct: 73 PSAIQLGAVVELIHAATLVHDDVIDTAQTRRGRPSTNVKWGNHTCVLAGDWLYMQAFQIA 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S + L+ L + + EGEL QL ++V+E D + ++ KTA LFS +
Sbjct: 133 LRERSFQMLDLLIGLTQMMVEGELLQLERIGRINVSEADCMELVDRKTACLFSVCARLGG 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L ++ L Y NLG+AFQLVDDVLD+ +GK +G D R GK TLP++ A
Sbjct: 193 LCGHTDPQTQEKLGEYAWNLGMAFQLVDDVLDFTSREKVLGKPVGGDLREGKVTLPLVYA 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R E+ ++ + D ++ ++ + + + + RA ++ KA+ ++
Sbjct: 253 LERAAPEERKLVETILEDRTYDRVPFQRILALLEKYQGIERVKERAQAFTDKARQTIAEF 312
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P+S ++++L+ V + +R +
Sbjct: 313 PESPYQRALLAVTELVTERDH 333
>gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 345
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 176/326 (53%), Positives = 228/326 (69%), Gaps = 6/326 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR
Sbjct: 18 LNDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYR 77
Query: 61 G-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL
Sbjct: 78 AGEAGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLG 137
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
QAF M++E S AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+A
Sbjct: 138 QAFKMMVEVGSLRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAA 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A EV ++A S A +SYGMNLG+AFQL+DD LDY G +GKN+G+DFR GK T
Sbjct: 198 ACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDALDYGGTSAALGKNVGDDFREGKIT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA 294
LPV+L+F+RG+ E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A
Sbjct: 258 LPVVLSFRRGSAEERAFWRRTLEQGEIDEARDLDTAIGIMRRHRALEDTVERARHYGAIA 317
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+D+L PD+ K++L++ VDFC+ R
Sbjct: 318 RDALALFPDAPMKRALLQAVDFCIAR 343
>gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
Length = 304
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 125/303 (41%), Positives = 179/303 (59%), Gaps = 1/303 (0%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
I + SDV +I + Y+I GGKRLRP+L + +A L Y+G +H A IEFIHTAT
Sbjct: 2 IHAXLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTAT 61
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
LLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S
Sbjct: 62 LLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVN 121
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
+AEGE++QL + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG
Sbjct: 122 VIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYG 181
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Q G + + I
Sbjct: 182 KYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIE 241
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ L + M + +L T +A KA L LP+S +K++L+ + +
Sbjct: 242 KAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAV 300
Query: 319 QRL 321
R
Sbjct: 301 NRS 303
>gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
Length = 324
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 108/322 (33%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 4 LEDLTLKDMEK----VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ LK++ + V+ I + + E + D +LI +GGKR+RP+L + + LML
Sbjct: 1 MRSEILKELNRARELVDAKIEEVLPRGGPEDLYDACWHLIEAGGKRIRPLLAIKSCLMLG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + A A+E IHT TL+HDD++D+ RRG A + WG ++L GD L S+AF
Sbjct: 61 GSEEDVLPEAVAVELIHTFTLIHDDIMDEDDERRGVPAVHVKWGVPVAILAGDTLFSKAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E EA++ L+ + EG+ + +VTE+++L +I+ KTA L +
Sbjct: 121 EVAAEGGDVEAVKELARACTEICEGQAMDIGFENRTEVTEDEFLEMIRKKTAALIRTSCV 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V L AG +AL+ YG NLGIAFQ+ DDVLD G+ +E+GK +G D GK TL V
Sbjct: 181 VGGLKAGANREQLEALREYGENLGIAFQIQDDVLDLVGDESELGKPVGSDIVEGKKTLIV 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + + ++ S + + S E++++ I+ + A+ + RA Y +AK +L
Sbjct: 241 IKGLELADEEQRERILSVLGNEDASREDVREVIQILEDLGAIDYAKKRAREYADRAKAAL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
R LP++ ++ L ++ DF ++R
Sbjct: 301 RELPENEHREFLEKLADFVVER 322
>gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
Length = 323
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G
Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G+ + + + I +E L +M+E +L T +AY KA L L
Sbjct: 244 MHNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESEYKQALTTLAHLAVKRS 322
>gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination
protein c3) [Paenibacillus polymyxa SC2]
gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Paenibacillus polymyxa SC2]
Length = 324
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 169/319 (52%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L L KDM + + + I S +I D +L+ +GGKRLRP+ L EY D
Sbjct: 5 DLFGLLKKDMNFIEEELYRSIDSREPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLD 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A +
Sbjct: 65 KLKRIAVPLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + ++ ++
Sbjct: 125 GLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAM 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG + V L +YG N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A
Sbjct: 185 AAGARERVNSLLYTYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPVIYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ R+ + + +KA +++++ + E A Y KA ++L LP
Sbjct: 245 EQPELRDDLLAEIWRIQDGDGQGDTRKAVDMIKKSEGITKAEILADRYINKALNALDLLP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D KK+L ++ F +R
Sbjct: 305 DVKTKKTLRDIAHFVTRRS 323
>gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
Length = 333
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 180/321 (56%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + +
Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGHT 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA IEFIHTATLLHDDVVD S LRR A +WGN SVLVGDFL S++F +
Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSSSTANALWGNAPSVLVGDFLYSRSFQL 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++
Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI
Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + I+ G + + +R +L + RA +Y A+ +L
Sbjct: 254 AMTHSDAATCERLRMIISKGDSDA--MPEVLNAIRTTGSLDYSRQRASAYAATAERALEG 311
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ +L + + +QR
Sbjct: 312 LPETEAVAALRGLARYAVQRT 332
>gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15]
gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15]
Length = 322
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 188/320 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y
Sbjct: 1 MHSALALVGDDLKNVEAQFKKDLESDVYLIRKVGEYVLASGGKRIRPTLLLLAAKLCGYT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV LA IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F +
Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L+ +S +AEGE+ QL + +LD+T E Y+ V+KSKTAVL SAA E
Sbjct: 121 MVQAGDLRVLKVISDATTIIAEGEVLQLLCTSDLDMTLERYIEVVKSKTAVLLSAACEAG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I
Sbjct: 181 AILGKATPEQELALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ T E+ + + + + + F ++ + + T A Y + K+ L+
Sbjct: 241 TLRKCTDEERETIAAVVEKEVMEPGDFEAVFALVHKYGGIQYTTEVAGEYIARCKEHLQA 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S+ K++ +++ D+ + R
Sbjct: 301 FPASTEKQAALDLADYVVSR 320
>gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
Length = 323
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G
Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G+ + + + I +E L +M+E +L T +AY KA L L
Sbjct: 244 MRNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S +K++L + ++R
Sbjct: 303 PESEYKQALTTLAHLAVKRS 322
>gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
Length = 321
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 122/322 (37%), Positives = 197/322 (61%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + ++E+V+ LI++++ SDV+M+ +V +Y++ +GGKRLRP+L L L
Sbjct: 2 IEAIRACVQSEVEQVDQLIIEQLHSDVDMVENVGQYIVDAGGKRLRPLLVLLAGEALGGC 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++H+ + +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF +
Sbjct: 62 TESHIRFSAVVEFIHTATLLHDDVVDVSTLRRGRPTANEAFGNAPSVLVGDFLYTRAFQL 121
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + + L ++ T+AEGE+ QL+ + N D+ E Y+ VI KTA+LF++A + +
Sbjct: 122 MVQLDNMDLLRHMADTTNTIAEGEVLQLARAGNPDIDESQYIDVITRKTAILFASACQGA 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +QAL YG+NLGIAFQ++DDVLDY G+ GKNIG+D GK TLP++
Sbjct: 182 AMLANCDIKTQQALSQYGLNLGIAFQMIDDVLDYEGDPTVTGKNIGDDLNEGKTTLPLLH 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q G+K + + + S +L + +R + +L T RA A L
Sbjct: 242 TMQTGSKP--DRDLVAQSLREKSTASLSEVIAAVRRSGSLDFTRERARERHDLAMSGLDV 299
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L ++ K +L +++ L+R +
Sbjct: 300 LQENRAKAALSDLLHLSLERAS 321
>gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
Length = 323
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 129/321 (40%), Positives = 192/321 (59%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K + + D E VN I + S+V +I +V Y+I SGGKRLRP++ + A Y+G
Sbjct: 4 KAIYAVVDDDFEAVNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAILCARAAGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D HV +A IEF+HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A ++
Sbjct: 64 DRHVDVAAIIEFLHTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVS 180
+ + L+ S T++EGE+ QL ++ + +EE+Y+ VI KTA +F AA +
Sbjct: 124 VALRHPRLLDIFSQSTNTISEGEVLQLINVRDPNTSEENYMRVIHHKTAKMFESAAETGA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L A + A +YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I
Sbjct: 184 VLGADEVSDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
G+ + K I G + E+L++ +R + L T +A + A +++
Sbjct: 244 TIANGSPEQATLIKDAIRSGGL--EHLEQIVETVRASGGLQYTVDKAAEQTRIALEAIAQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S +K +L + + L+R
Sbjct: 302 VPASPYKDALFRLAEESLKRT 322
>gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 334
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 137/325 (42%), Positives = 201/325 (61%), Gaps = 4/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L + DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y
Sbjct: 9 LRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYE 68
Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D HV LA +EFIHTATLLHDDVVD+S LRRG +A ++GN+ SVLVGDFL ++
Sbjct: 69 PDATHQRHVALAACVEFIHTATLLHDDVVDESTLRRGLASANAIFGNKASVLVGDFLFAR 128
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F ++ + S + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA
Sbjct: 129 SFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDLSTSIEKYLEVIHGKTAALFAAA 188
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
V +++A V +AL SYG NLG+AFQLVDD LDY + +GK IG+DFR GK TL
Sbjct: 189 CRVGAVVADQPLKVEEALDSYGTNLGMAFQLVDDALDYAADQATLGKTIGDDFREGKITL 248
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A+ G ++++ FW+ I + + + ++L A ++ A+ T A Y + A
Sbjct: 249 PVLTAYNAGDEKDRVFWRRVIEESEQTPDDLDHALELIARTNAIGITLDHATRYAEAASQ 308
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L P S K+ L + + + RL
Sbjct: 309 ALDIFPHSRLKQLLQDTASYTVSRL 333
>gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2]
gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2]
Length = 320
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KM+ D+ + + + I ++ ++ +L+ +GGKR+RP+ L A EY
Sbjct: 3 LKMMYSFLNSDLTVIENELEETIKAESPLLHQASLHLLQAGGKRIRPVFVLLAAKFGEYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A ++E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ ++A +
Sbjct: 63 IDKIKNVAVSLELIHMASLVHDDVIDDAELRRGQPTIKAKWDNKIAMYTGDYIFARALEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K+ A + LS L GE+ Q+ N D Y IK KTA+L + + ++
Sbjct: 123 ITNIKNPHAHKILSHTLVELCIGEIEQIKDKYNYDQNIRTYFRRIKRKTAMLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A V+ + + L +G +G+++Q++DDVLD+ G E+GK G D G TLP +
Sbjct: 183 GIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFVGTEKELGKPAGGDLHQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + +++K +++++ A+ + + Y QKA L
Sbjct: 242 ---FAMEDSIICDQISRVHEGTERSDIEKIIALVKDSGAVEKSLQISDKYLQKALGVLEE 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S KK+L ++ F +R
Sbjct: 299 LPPSRSKKALRDIAKFIGKRK 319
>gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91]
gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91]
Length = 322
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+
Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVVLVRQVSEYIIHSGGKRLRPALVILAAGLYDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M
Sbjct: 63 GTHHYNLAAVVEFIHTATLLHDDVVDESQLRRNQATANALFGNAASVLVGDFLYSRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA +
Sbjct: 123 MVEVDNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAGRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + +AL +YGM+LG AFQLVDD+LDY G ++ GKN+G+D GKPTLP+I
Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGKNLGDDLAEGKPTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT + N + I G I+++ AL + A A +
Sbjct: 243 AMRAGTTDQANTVRHAIESGGKDG--FGPVLEIIQKTGALDYAKQCAQKEANMATSVIST 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L DS +K+ L+E+ +F + R
Sbjct: 301 LRDSIYKQCLLELAEFAVSR 320
>gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
Length = 329
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 123/319 (38%), Positives = 191/319 (59%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D+E V+ +I +++ SD+ ++ + +YLI +GGKR+RP+L L A L Y+G
Sbjct: 11 NSFLSPVLPDLEAVDRIIRQQMHSDIALVGRIAEYLINAGGKRIRPVLVLLMAKALGYQG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H LA IEFIHTATLLHDDVVD+S LRRG +A ++GN +SVLVGDFL ++AF M+
Sbjct: 71 KQHQTLAATIEFIHTATLLHDDVVDESELRRGIPSANALFGNASSVLVGDFLYTRAFQMM 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + LE L+ +AEGE+ QL ++N + E+ Y+ VI +KTA LF A+ + +
Sbjct: 131 VSVGNMRILEVLAEATNLIAEGEVMQLMNARNAAIDEDGYMKVIYAKTAKLFEASSVLGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+A V A +G +G+AFQL+DD+LDY G+ GKN+G D + GK TLP+I
Sbjct: 191 LVAHVSEEKIGAAARFGRAVGMAFQLIDDMLDYAGDTGVTGKNVGNDLKEGKMTLPLIYL 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G++++K + ++ + S +R + A+ T +A +A +L L
Sbjct: 251 MKNGSEKQKASVRKSVEENDESC--FPAVLNAVRSSGAMDYTYQKARQAVAEAVQALSAL 308
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+KKSL+++ F ++R
Sbjct: 309 DSGQYKKSLLKLSSFSVER 327
>gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640]
gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06]
Length = 324
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 192/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ + Y D
Sbjct: 8 FQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRSVGYDDDK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 128 SGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I +
Sbjct: 188 GKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMR 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G+++ N ++ + + S +K + + AL + A A +L LPD
Sbjct: 248 QGSEQVANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVAALDALPD 305
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S K++++ + L R++
Sbjct: 306 SEAKEAMIRLARESLVRVS 324
>gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
Length = 309
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 186/310 (60%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A H LA +
Sbjct: 1 MQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEVNARHHELAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M++ +S +E
Sbjct: 61 EFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQMMVGVESMRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE+ QL + D+T+E YL VI KTA LF AA + ++I
Sbjct: 121 VLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++A + GT +
Sbjct: 181 QAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLIAMRLGTTAQAQ 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I +G + L + E AL A + D+++ LPDS +++L+
Sbjct: 241 TIRKAIEEGGLD--ELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQHLPDSPSRQALL 298
Query: 312 EVVDFCLQRL 321
++ +F + R
Sbjct: 299 KLAEFAVDRT 308
>gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 324
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 124/319 (38%), Positives = 192/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +D++KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y +
Sbjct: 8 FKQHLHEDLDKVNVVINQAVKSDVALISQIGTYIISAGGKRLRPIITILAGKAVGYDDEK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQLMVA 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N D+TE+ Y+ VI+ KTA LF AA +V +++
Sbjct: 128 SGSMKILEVMADATNIIAEGEVMQLMNIGNTDITEKQYIQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I
Sbjct: 188 GGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMH 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G+++ + + + S +K + + AL A +KA L LPD
Sbjct: 248 NGSEQAAKDVRLALENADRSY--FEKIHDYVVNSNALPYAINEARKAVEKAVACLDILPD 305
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ ++ ++ + L R++
Sbjct: 306 NEITLAMRQLAEESLARVS 324
>gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
NRL30031/H210]
gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
NRL30031/H210]
Length = 324
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 128/313 (40%), Positives = 189/313 (60%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + + LA
Sbjct: 14 DDLAKVNVVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE YL VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYLQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I + G++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIYLMRNGSELA 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N + + + S +K + + AL + A KA SL LPDS K +
Sbjct: 254 ANDVRHALENADRSY--FEKIHDYVVNSDALPYSISEAKKAVDKAIASLNVLPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLARVS 324
>gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
15826]
gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
15826]
Length = 326
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 122/319 (38%), Positives = 188/319 (58%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + L +DM+ L+ + S+V + V++Y I GGKR RP+LTL + + +YRG
Sbjct: 8 EAIRQLVQQDMQATEALMRAEMQSEVPLAELVMQYAIGDGGKRFRPLLTLLSCGLCDYRG 67
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A IEFIH ATLLHDDVVD+SALRRGK +A + +GN SVLVGDFL ++AF ++
Sbjct: 68 EHAITAAAFIEFIHNATLLHDDVVDESALRRGKPSANIAFGNAASVLVGDFLYTRAFQLM 127
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ T + + ++ +A GE+ QL + DV E Y VI+ KTAVLF+AA + +
Sbjct: 128 VRTGNSAVIAMMADAVNLIAAGEVMQLGNMHDPDVDEPRYYRVIELKTAVLFAAACKTAG 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG+ + + L YG LG+AFQ++DD+LDY G+ +GK++G+D GKPTLP+I A
Sbjct: 188 LLAGLPEARSEQLAVYGRKLGMAFQIMDDLLDYTGDEALIGKSLGDDLAEGKPTLPLIRA 247
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+ K + I G E + + +++ AL + A +A +L
Sbjct: 248 QQQLPAAGKQRLRDIIEAGDR--EAIGEVIALLQATDALPYSRQAAERLAHEAVQALTAF 305
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS++K +L + +R
Sbjct: 306 PDSAYKDALFSLAQRTTER 324
>gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
Length = 367
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 144/322 (44%), Positives = 204/322 (63%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A +
Sbjct: 44 VDALVHLAKDDMAAVDALIIARMQSDVPVIPLLAEHLVSAGGKRLRPLLTVAAARAIGQT 103
Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G D LA ++EFIHTATLLHDD+VD S +RRGKVAA L+WG+ +SVLVGDFL ++AF
Sbjct: 104 GAIDGPKKLAASVEFIHTATLLHDDIVDGSEMRRGKVAAHLIWGSASSVLVGDFLFARAF 163
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+++ET S AL L+ + +AEGE+ QL+ + +L++ + YL +I++KTA LF+AA E
Sbjct: 164 ELMVETDSLRALGILARASAVIAEGEVLQLTRAHDLNLDLDTYLQIIRAKTAELFAAAAE 223
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ AG + AL+ YGM LGIAFQL DD LDY G +GKN G+DF GK TLP+
Sbjct: 224 SGAVGAGATDEQVAALRDYGMALGIAFQLADDALDYGGATETLGKNAGDDFNEGKATLPL 283
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+LA QR E FW I G E+ +A ++ + A+ T A Y +AK +L
Sbjct: 284 LLAVQRTKGTEDLFWDRVITKGDRKPEDFDRARQLIVASGAVEATLDTASEYADRAKTAL 343
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ LP W+ +L + DF + R
Sbjct: 344 QVLPAGPWRSALEALADFAVSR 365
>gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
Length = 325
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 173/323 (53%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+++++ +ME + S V ++ + Y++ GK++RPM A M+
Sbjct: 4 VELIKLPIQNEMELFEEKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A +E IHTATL+HDD+VDDS +RR + +W N+ +VLVGDFLLS+
Sbjct: 64 GFDERTYRGAAVVELIHTATLVHDDIVDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A
Sbjct: 124 LLSIDNNDFDLLKLISIAVREMSEGELLQIEKARKLDITEAIYFDIIRKKTATLIAACCG 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + G + ++ +G +GIAFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 IGAASVGANQDCIRKMRKFGEYIGIAFQIKDDLFDY--SDAKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I +K+EK + ++I + +K+ ++++ + T + + QKA L
Sbjct: 242 IYTLNTCSKKEKAWLINSIKKHNKDKKRVKEVIAFVKDHGGIAYTMTKMNEHKQKALALL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ PDS +KKSL ++D+ ++R
Sbjct: 302 QDFPDSEYKKSLETMIDYVVERK 324
>gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
Length = 324
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 192/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVDSGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVAALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 310
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 195/310 (62%), Gaps = 1/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +N +I+ ++ SD+E++ + Y+I GGKR+RPM+++ +A L Y+GD H+++A I
Sbjct: 1 MAALNVIIIDQMHSDIELVNQLSAYIINGGGKRIRPMISILSARALNYKGDQHIIVAALI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD S LRRGK A V+GN SVLVGDF+ ++AF M+ + S L+
Sbjct: 61 EFIHTATLLHDDVVDKSDLRRGKKTANTVFGNSASVLVGDFIYTRAFQMMTDLGSMRILK 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S ++EGE++QL N+++TE DY+ VI SKTA LF AA + ++++A
Sbjct: 121 VMSSATNVISEGEVQQLMYCNNVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
AL+SYG LG +QL+DD+LDY + N GK+IG+D GK TLP++ A GT+ +K
Sbjct: 181 SALQSYGCYLGTTYQLIDDLLDYNSKGNLFGKDIGDDLDEGKATLPLLHAMHHGTEEQKQ 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
I G ++L + IM++ +L T RA KA +L+ LP +S++ +L
Sbjct: 241 MISFAIKRGNA-RQSLPQILNIMKQCGSLGYTLNRAKEEANKAISALQILPKNSYRTALE 299
Query: 312 EVVDFCLQRL 321
+ F ++R
Sbjct: 300 SLAYFAVKRS 309
>gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 325
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 116/321 (36%), Positives = 176/321 (54%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + KD+ + + + ++++ DV +L+F+GGKRLRP+L + +A +
Sbjct: 5 QEIFEFVEKDLADIERALEANLNPYLDLVRDVASHLLFAGGKRLRPVLMVLSARVCGCNN 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ L+ E++H ATLLHDD+VD + RRGK+AA VW VL GDFLLS+ +
Sbjct: 65 GEEINLSTVFEYLHAATLLHDDIVDGAETRRGKIAAHKVWDPAEVVLTGDFLLSRTCTIA 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+T ++ ++ V ++EGE++QL K LD++EE Y+ VI KTAVL SAA EV +
Sbjct: 125 ADTDKLPIIKVITNVTGVMSEGEIQQLLNKKRLDLSEEQYMDVIYRKTAVLISAACEVGA 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+A +ALK YG +LGIAFQ+ DD+LDY + GK IG D GK TLP+I A
Sbjct: 185 LLADAPPEQVEALKEYGRHLGIAFQMADDLLDYVADPKVTGKAIGADLAEGKLTLPLIHA 244
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + + I D S E+ + ++ + T +A + AK L
Sbjct: 245 LEQTGSETRPRMEKIILDENASKEDFAFVLDNIIKSGGVDYTNQKAQEHVAAAKALLDIF 304
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PD K L +V DF QR +
Sbjct: 305 PDCPEKDVLAKVADFAAQRDS 325
>gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
Length = 332
Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 138/321 (42%), Positives = 208/321 (64%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L D+E VN +I R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 12 ERLNAALTTDLEAVNEVIAARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GDNH+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F +
Sbjct: 72 GDNHIKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++T S L+ L+ A T+AEGE+ Q++ +++L TE+ YL +++ KTA LFSAA +V
Sbjct: 132 MVKTGSLRVLDILANAAATIAEGEVLQMTAAQDLGTTEDTYLKIVRGKTAALFSAATQVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+I+ ++ +AL YG LGIAFQ+VDD+LD G + GKNIG+DFR K TLPVI
Sbjct: 192 GVISDADETIVKALYDYGDALGIAFQIVDDLLD-YGGSDATGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FW+ I GK +L+ A ++ ++ ++ A + + AK ++
Sbjct: 251 AVAAADTEERAFWERVIEKGKQDEGDLEHALTLLAKHGSMQAARVDALEWIEVAKSAMAN 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + ++ L+++ D+ + R+
Sbjct: 311 LPQAPLREMLIDLADYVVARV 331
>gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Paenibacillus polymyxa E681]
gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Paenibacillus polymyxa E681]
Length = 324
Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 169/319 (52%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L L KDM + + + I S +I D +L+ +GGKRLRP+ L EY D
Sbjct: 5 DLFGLLKKDMNFIEEELYRSIDSTEPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLD 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A +
Sbjct: 65 KLKRIAVPLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + ++ ++
Sbjct: 125 GLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAM 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG + SV L SYG N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A
Sbjct: 185 AAGARESVNSLLYSYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPVIYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ R + + +KA +++++ + E A Y KA ++L LP
Sbjct: 245 EQPELRADLLAEIRRIQDGDGQGDARKAVDMIKKSEGIAKAEILADRYINKALNALDLLP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D KK+L ++ F +R
Sbjct: 305 DVKTKKTLRDIAHFVTRRS 323
>gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355]
Length = 324
Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVAALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
Length = 321
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 165/322 (51%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ L K+++ + S V ++ ++ Y++ GK++RPM L +A +
Sbjct: 1 MDEIKHLISKELQDFESKFSDAVKSHVPLLDRIMHYIVKRKGKQIRPMFVLLSAKLFNNN 60
Query: 61 G-DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ A +E +HTATL+HDDVVDD+ RRG + +W N+ +VLVGD+LLS+
Sbjct: 61 IQESTYRAAALVELLHTATLVHDDVVDDANERRGFFSINALWKNKIAVLVGDYLLSKGLL 120
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ +L+ LS ++EGEL Q+ ++ L++ E+ Y +I+ KTA L ++A
Sbjct: 121 LSVDNNEFRSLKILSEAVKEMSEGELLQIEKTRKLNIKEDIYFEIIRRKTASLLASACAA 180
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + ++ +G +G+AFQ+ DD+ D +++GK G D R K TLP+I
Sbjct: 181 GAWSTTNDDETTEKMRLFGEKVGVAFQIKDDLFD--YGSDKIGKPTGIDIREKKMTLPLI 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ T + + + + + + + +++++ + T+ + + Y +A L
Sbjct: 239 YTLEHATPDIRRRIINIVKNHNTDKDKVAEVIDLVKKSGGIEYTQEKMFQYRDEALAVLH 298
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P + + L +V + R
Sbjct: 299 SFPANDIRAGLETLVRYTTDRT 320
>gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
Length = 322
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 140/321 (43%), Positives = 194/321 (60%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K + D E VN I + + SDV M+ V +Y+I SGGKR+RP+L L +
Sbjct: 4 KAVFSTVSSDFEAVNSTIHRYLASDVPMVEKVAEYIIDSGGKRMRPLLVLLAGQLNGQLT 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL +++F M+
Sbjct: 64 DRHHLLAAIIEFLHTATLLHDDVVDKSDMRRGRATANANWGNAPSVLVGDFLYARSFEML 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E + + +++LS +AEGE+ QL KN D+TE Y+ VIK KTA+LF A+ E S
Sbjct: 124 VELGNFDVMQSLSQATRVIAEGEVMQLMNVKNPDITEAQYMEVIKGKTAILFKASAETSG 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LI+G + AL YG+NLG+AFQL+DD LDY G+ +GKNIG+D GKPTLP+I A
Sbjct: 184 LISGYDRTSVNALADYGLNLGLAFQLIDDALDYAGDAEALGKNIGDDLAEGKPTLPLIFA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++GT EK ++ I G + L ++R A+ +A ++ AK +L
Sbjct: 244 MEKGTDEEKALVRNCIRKGGLV--ELDAVLEVIRHTDAIGYVTQKALTHADAAKQALASF 301
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
DS K++LM + D + R +
Sbjct: 302 ADSDSKRALMALADLAVSRQS 322
>gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301]
gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301]
Length = 332
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 185/320 (57%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ D+ VN +I + S+V ++ V Y++ SGGKRLRP+L L + +
Sbjct: 13 LNTIQSCIAADILAVNTVITHSLHSEVTLVNQVAHYIVNSGGKRLRPILVLLSGGLFGEV 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M
Sbjct: 73 KPEHHQLAAVVEFIHTATLLHDDVVDESSKRRGQNTANAIFGNAASVLVGDFVYSRAFQM 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ ++ +E LS +AEGE+ QL N DVT+ YL VI KTA LF AA +
Sbjct: 133 MVAVQNMRVMEVLSNATNVIAEGEVLQLLNIHNADVTDGAYLQVIHYKTAKLFEAATRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ S +AL YGM++G AFQL+DDVLD G +E+GKN+G+D GKPTLP++
Sbjct: 193 AIISNASPSDEEALSQYGMHIGTAFQLIDDVLDLSGNASEIGKNLGDDLSEGKPTLPLLY 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT E K I G + E+L + AL A + A ++
Sbjct: 253 AMRNGTADEAETIKRAIEHGGL--EDLVTVLSAVERTGALDHVRKVAAKESELACAAIAH 310
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
DS +K++++ + +F + R
Sbjct: 311 FADSPYKQAMLTLAEFAVAR 330
>gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10]
Length = 348
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 205/321 (63%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ DM+ VN +I +++ S+V ++ + +Y+I +GGKR+RP+L L A Y+G
Sbjct: 30 NNIAHTIAADMDAVNTVIRRKLHSEVSLVNQIAEYIISAGGKRIRPVLVLLVANAYSYKG 89
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H LA +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M+
Sbjct: 90 TAHHELAAVVEFIHTATLLHDDVVDESSLRRGRATANALFGNAASVLVGDFLYSRAFQMM 149
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + ++ LS +AEGE+ QL + DV++E YL VI+SKTA LF AA E+ +
Sbjct: 150 VGLNNMRVMQILSDATNVIAEGEVLQLLNMHDPDVSQERYLQVIRSKTAKLFEAAAELGA 209
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L++G ++ +A YG +LG AFQL+DDVLDY G+ NE+GKN+G+D R GKPTLP+I
Sbjct: 210 LVSGANDAQIEAAGEYGRSLGTAFQLIDDVLDYAGDANEIGKNVGDDLREGKPTLPLIYL 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ GT ++ +S I G ++ + + AL T +A + ++A +++ L
Sbjct: 270 MENGTPEQRELVRSCIEQG--DEQHFDTILAAITSSGALEYTRQQAVTAAKRAAEAIAGL 327
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
PDS +K+SL+++ DF + R +
Sbjct: 328 PDSIYKESLLQLADFSVNRTH 348
>gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
Length = 325
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 171/321 (53%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ +M+ + + S V ++ V ++++ + GK++RPM A ++
Sbjct: 5 VEEIKRPINDEMKLFEQKFYESMQSKVALLDKVTRFIVTTKGKQMRPMFVFLCAKLVGEV 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVD+S RR + +W N+ +VLVGD+LLS++ +
Sbjct: 65 TEKTYRGASMIELIHTATLVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKSVLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K + L +S ++EGEL QL ++ LD+TE+ Y +I+ KTA L +A E+
Sbjct: 125 STDHKDYDLLGVISRTIREMSEGELLQLEKARKLDITEDVYYEIIRQKTATLIAACCEIG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L ++ + + +G G+AFQ+ DD+ D N +GK +G D + K TLP+I
Sbjct: 185 VLSNNADEALAKKMMDFGTFTGMAFQIKDDLFD-YLSSNVIGKPVGIDIKEQKMTLPLIH 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++++ ++ TI + + +K+ ++ + L + QKAKD L
Sbjct: 244 TLTTANEKDRKYYFDTIKRYNNNPKRVKELIEFVKSSGGLEYAITVMKDFQQKAKDILNE 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PDS +KSL ++D+ ++R
Sbjct: 304 FPDSEARKSLHIMLDYVIERK 324
>gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
WCH70]
gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
WCH70]
Length = 320
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + K + SD + + +L+ +GGKR+RP+ L A Y
Sbjct: 3 LKAMYSFLNTDLRAVEKELEKTVQSDYSQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++
Sbjct: 63 IERIKHVAVALELIHMASLVHDDVIDDAELRRGRKTIKAKWNNRFAMYTGDYMFARSLEQ 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ A L+ + GE+ Q+ D YL IK KTA+L +A+ ++
Sbjct: 123 MARLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A V + L +G +G++FQ+ DD+LD+ G ++GK G D G TLP +
Sbjct: 183 AIAANAAKDVAERLYLFGYYVGMSFQITDDILDFTGTEAKLGKPAGSDLLQGNVTLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + T K + +K+ ++++ A+ + + Y QKA L
Sbjct: 242 ---FAMEDKHARERITAVHPKTTPNEMKEIITLIKQTGAIEKSYALSDRYLQKAFRVLET 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP++ + +L ++ + +R
Sbjct: 299 LPNNKARSTLYDIAKYIGKR 318
>gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2;
Short=HEPPP synthase subunit 2
gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus
stearothermophilus]
Length = 320
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 155/320 (48%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + + + S+ + + +L+ +GGKR+RP+ L A +Y
Sbjct: 3 LKAMYSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGQYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++
Sbjct: 63 LERMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLER 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++
Sbjct: 123 MAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG + + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+
Sbjct: 183 ALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E+ + V + ++ A+ + + Y KA L
Sbjct: 242 ---YALSDERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDG 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + L ++ + +R
Sbjct: 299 LPMNEARGLLRDLALYIGKR 318
>gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
Length = 322
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 139/320 (43%), Positives = 198/320 (61%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L E VN I+ + S+V ++ + Y++ SGGKRLRP+L L A Y+GD
Sbjct: 5 QLNPAIEPQFEAVNDYIINHLGSNVPLVEKIGHYIVESGGKRLRPLLVLLAANAAGYKGD 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
HV LA IEFIHTATLLHDDVVD+S LRRGK A WGN SVLVGDFL S+AF +++
Sbjct: 65 KHVPLAAIIEFIHTATLLHDDVVDNSDLRRGKDTANAKWGNAPSVLVGDFLYSRAFQIMV 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E S + +E +S +AEGE+ QL +KN D TEE Y+ VI KTA+LF AA E ++
Sbjct: 125 EIGSMQIMEVISNATNVIAEGEVLQLLNTKNPDTTEEAYMQVILGKTAMLFEAATEAGAI 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+A R+ L+ YG++LG AFQL+DDV+DY EMGKN+G+D GK TLP+I A
Sbjct: 185 LADATAEEREGLRLYGLHLGTAFQLIDDVMDYLSTAEEMGKNVGDDLAEGKATLPLIHAM 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ G + ++ + I G + +L+ I++E A+ T+ +A KA +L L
Sbjct: 245 RAGNEEQRLLVRQAIRKGGLD--DLQPIMDIVKETGAIEYTQQKAQEEADKAIAALSALS 302
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DSS+K++L+++ + ++R +
Sbjct: 303 DSSFKETLVQLANMAVKRKS 322
>gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
Length = 325
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 189/321 (58%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ I + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVANDFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAEN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF +
Sbjct: 67 LEPHRKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL + TE YL++I KT+ LF A E +
Sbjct: 127 LVDLNNMVLLKDFSTGTCEIAEGEVLQLQSQHQPETTEATYLNIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ ++ RQ LK++ + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-SDKDEFRQPLKTFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIA 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T + + +I G E+L++ I+ E+ AL RA + A D+L+
Sbjct: 246 ALKNTTGEQHEIIRRSIATGGT--EHLEQVIQIVNESGALDYCRQRATEETEIAIDALQA 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS ++++L+ + L R+
Sbjct: 304 LPDSEYRQALINLAKLALHRI 324
>gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
pv. campestris str. B100]
gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
pv. campestris]
Length = 332
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 127/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGADAQVQQCLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G E + + +R L + RA Y A+ +L
Sbjct: 253 AIAHSDAATQQRLRQIVEQG--DAEAMPEVLTAIRATGGLDYSRQRAAEYAAAAEQALDG 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPPSPAVAALRGLARYAVERTH 332
>gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC61]
gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC52]
gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC61]
gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC52]
Length = 320
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 88/320 (27%), Positives = 161/320 (50%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y
Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++
Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++
Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+
Sbjct: 183 ALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E+ K T + VE + +++ A+ + + Y +KA L
Sbjct: 242 ---YALCDEQVRAKITAVNADTDVEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + L ++ + +R
Sbjct: 299 LPANEARTLLHDLALYIGKR 318
>gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
Length = 340
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 147/319 (46%), Positives = 214/319 (67%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L L DM +V+ LIL+R+ S VE+IP++ +YLI +GGKR+RPM+T+A A M+ +
Sbjct: 20 EALARLAHDDMRRVDALILERLDSHVELIPELARYLIEAGGKRVRPMITVAAANMIGHSD 79
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA A+EFIHTATLLHDDVVD+S +RRGK AA LVWGN +SVLVGDFL +++F ++
Sbjct: 80 IAPLKLAAAVEFIHTATLLHDDVVDESGMRRGKAAANLVWGNASSVLVGDFLFARSFSLM 139
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S AL LS A T+AEGE+RQLS K++ V+ E Y+ +I +KTA LF+AA +VS
Sbjct: 140 VEAGSMRALGVLSDAASTIAEGEVRQLSAVKDVGVSVETYMQIIDAKTAALFAAAAQVSG 199
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + AL++YG LG+AFQLVDD LDY G ++GK+ G+DFR GK TLPV LA
Sbjct: 200 IVADRPANEETALETYGRELGLAFQLVDDALDYSGASAKLGKSTGDDFREGKVTLPVALA 259
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ E FW I G+ + ++A ++ + AL T +A ++ ++A+++L
Sbjct: 260 IAAASTEETAFWDRVIARGEQVEGDFERAISLVNTHGALAATVTQARNHARRAREALAIF 319
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P + W+ +L ++ DF R
Sbjct: 320 PANKWRTALEDLADFVADR 338
>gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399]
gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149]
gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33]
Length = 324
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis
CGDNIH1]
gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
Length = 353
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 142/326 (43%), Positives = 203/326 (62%), Gaps = 6/326 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L D+ N I+ R+ S V +IP + +++ +GGKRLRP+LTLA+A + +
Sbjct: 26 LSGLIALVQDDLTLCNQAIIDRMDSQVPLIPQLAAHIVAAGGKRLRPLLTLASARLCGFD 85
Query: 61 G------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
HV LA +EFIHTATLLHDDVVD+S +RRG +A V+GN SVLVGDFL
Sbjct: 86 TALAGGVPRHVHLAACVEFIHTATLLHDDVVDESRMRRGMASANAVFGNNASVLVGDFLF 145
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++AF +++E S + L LS A T+AEGE+ QL+ +L+ E YL VI+ KTA LF+
Sbjct: 146 ARAFQLMVEDGSLQVLAILSKAAATIAEGEVLQLATQNDLETPESRYLEVIEGKTASLFA 205
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA +V +++A QAL YGM+LGIAFQL DD LDY + ++GK +G+DFR GK
Sbjct: 206 AACQVGAVVAARPAEEEQALYDYGMSLGIAFQLTDDALDYAADQRKLGKTVGDDFREGKI 265
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TLPV+ AF G EK FW+ TI + + ++L++A ++ + + T RA +KA
Sbjct: 266 TLPVLAAFHAGDAEEKRFWQRTIGESDQTEDDLEEALRLIARHDTIGLTLERARIMAEKA 325
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
K +L PD+ ++SL V D+ + R
Sbjct: 326 KRALDIFPDTPLRRSLCAVADYTVWR 351
>gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
18603]
gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
18603]
Length = 323
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +++ + S V ++ + Y++ GK++RPM +A +
Sbjct: 4 IDEIKRPIAAEIDVFEEKFKTSMQSSVPLLDRITHYIVKRKGKQIRPMFLFLSASLCGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTATL+HDDVVD+S RRG + +W N+ +VLVGDFLLS+ +
Sbjct: 64 NESTHRGAALVELLHTATLVHDDVVDNSYQRRGFFSINALWKNKIAVLVGDFLLSKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
IE L+ +S ++EGEL Q+ + +D+ E Y VI+ KTA L ++
Sbjct: 124 SIENNDFHLLKIVSEAVRQMSEGELLQIEKVRRMDIDEPVYYDVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +G ++ + ++ +G +GIAFQ+ DD+ D+ + GK +G D + K TLP+I
Sbjct: 184 AASSGADDATVEKMRLFGEKIGIAFQIKDDMFDFGTDDV--GKPLGIDIKEKKITLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T EK + + + + + + +++ L E + Y +A + L
Sbjct: 242 ALNHTTPTEKKRVINLVKNHNDDAQKIAEIINFVKQTGGLEYAESQMKLYQDEAFEILHA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PDS ++SL ++V F +R
Sbjct: 302 FPDSESRRSLEQLVRFTTER 321
>gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013]
gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196]
Length = 324
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYALAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
Length = 321
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+
Sbjct: 3 LPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V
Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT ++ + I G+ + ++ AL A + + A+ +L
Sbjct: 243 VMETGTPEQRELIREAIKTGQ---ADFAAVAQAIQATDALAHARQAAENEAELARQALSA 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S ++KSL+E F + R
Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319
>gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153]
gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis
H44/76]
gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase; OPP synthetase) [Neisseria meningitidis WUE
2594]
gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568]
gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385]
gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136]
gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76]
Length = 324
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 322
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +++ K + + S V ++ + Y++ GK++RPM A +
Sbjct: 3 LDTIKKPIDQELIKFEQHFKQSMRSSVPLLDKITYYIVRRKGKQVRPMFVFLAAQVCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLSQ +
Sbjct: 63 VEATYVAASLIELLHTATLVHDDVVDDSMERRGFFSVNALWKNKIAVLVGDFLLSQGLLL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K LE +S ++EGEL Q+ ++ LD+ EE Y +I+ KTA L S+A +
Sbjct: 123 AVRNKQFRILEIVSDAVKAMSEGELLQIEKARRLDIKEEVYYEIIRQKTASLISSACQAG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A + ++ +G +G+AFQ+ DD+ D+ + GK +G D + K TLP+I
Sbjct: 183 AASATTDEDAIERMRLFGEKIGLAFQIKDDLFDFGTDDV--GKPLGIDIKEKKMTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + + E +K+ +R + + TE + Q+A D L
Sbjct: 241 ALNKSDSATRRHIIGLVRRHNENPEKVKEVIDFVRNSGGIQYTEAVMLRFRQEAFDILET 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S + +L ++V F +R
Sbjct: 301 FPESESRTALRDLVTFVTERK 321
>gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase; OPP synthetase) [Neisseria meningitidis
8013]
Length = 324
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYALAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
MPOB]
gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
MPOB]
Length = 323
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 123/319 (38%), Positives = 185/319 (57%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D+ ++ I + + V +I V +Y++ SGGKRLRP+L + +A + Y+G
Sbjct: 3 ESIISRIQPDLRRIEEEIELLLTTSVPLISVVGRYIMGSGGKRLRPLLLVLSARLCGYQG 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA EFIH A+LLHDDVVD + RR + AA VWGNQ VLVGDFL S+A +
Sbjct: 63 SHDASLAVVFEFIHAASLLHDDVVDHAKFRRNRPAANTVWGNQAVVLVGDFLYSKAIHLT 122
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ S LE LS ++EGE+ QL + N++++EE+Y+ VI KTAVL SAA ++ +
Sbjct: 123 VGYNSLRMLEVLSEATTRMSEGEVLQLVHADNIEISEEEYIEVITRKTAVLISAACQIGA 182
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L G +ALK+YG NLGIAFQLVDD LDY G+V E+GK +G D + GK TLP+I A
Sbjct: 183 LFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDVKELGKPVGNDIQEGKATLPLICA 242
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G ++ + + ++ E+ + ++ + L T A + Q AK +L
Sbjct: 243 LRNGKPGDRARLREVFSSEQLRKEDFAEIKELVTRSGGLDYTLRLASRHIQTAKQALDIF 302
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P + L ++ D+ + R
Sbjct: 303 PPHPTRDLLSDIADYVICR 321
>gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
Length = 360
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 135/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DM+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL L+YRG++
Sbjct: 44 FRSLLADDMQTVDRVIRARLHSDVVLIRQVAEYIISAGGKRLRPVLTLLAGKALDYRGEH 103
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M++
Sbjct: 104 LHELAAMIEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYTRAFQMMVT 163
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T++ LE ++ +AEGE+ QL N DVTE YL VI+ KTA LF AA V +LI
Sbjct: 164 TRNMAILEVMAEATNIIAEGEVLQLLNIGNTDVTEAQYLQVIQYKTAKLFEAASRVGALI 223
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A +AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GKPTLP+I +
Sbjct: 224 AAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAETIGKSLGDDLAEGKPTLPLIHTMR 283
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G+ + I + + + ++ AL + A ++A ++ LPD
Sbjct: 284 HGSPEAATTVRDAIENARGD--RFHEVLAAVQSCGALDYAKSEAVRAAEQAVAAIAGLPD 341
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S K++L+E+ ++R +
Sbjct: 342 SPSKQALVELARLSVERNS 360
>gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
Length = 323
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 164/320 (51%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ K+++ + S V ++ + Y++ GK++RPM +A +
Sbjct: 4 LDEIKKPIEKEIDAFEEKFKASMKSSVPLLDRITHYIVKRKGKQIRPMFVFFSANISGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTATL+HDDVVD+S RRG + +W N+ +VLVGD+LL++ +
Sbjct: 64 TESTYHAATFVELLHTATLVHDDVVDNSFERRGFFSVNALWKNKIAVLVGDYLLAKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L+ +S L+EGEL Q+ + +D++EE Y VI+ KTA L ++
Sbjct: 124 SVDHQEFKQLKIVSDAVQQLSEGELLQMEKVRRMDISEEVYYEVIRKKTASLIASCCAAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S AG + + + + +G +GIAFQ+ DD+ D+ + +GK G D + K TLP+I
Sbjct: 184 STSAGATDEIVKKMHDFGEKIGIAFQIKDDLFDFGTDD--IGKPKGIDIKEKKVTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A K EK K+ + + E + ++ N L E + + Y +A L
Sbjct: 242 ALNNVDKAEKKRIKNLVKNHNDEPEKINAIIEFVKANGGLAYAEEQMFKYQDEAFKILAQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S + L +V F +R
Sbjct: 302 FPESESRTGLENLVRFTTER 321
>gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
DSM 18315]
gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+E + ++ N + S+ + + ++ + GK +RP+L L A
Sbjct: 5 SKIEQPVAVEFKRFNDEFAASLRSETNRLQSAIDQILNASGKHIRPLLVLLAAKACGQVT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + + + +S + L+EGE++QL ++ + E Y+ VI+ KTA+L SA E+ S
Sbjct: 125 IQTGNLQIIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACSEIGS 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG + + + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 185 ISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G K E + IN+ +VEN+ + N + E R Y KA L+ L
Sbjct: 244 LQTGRKEEVDHCLRIINEKDFTVENIDLLIDFAKANGGIEYAEQRMLEYHDKAVGVLKTL 303
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P+S ++ L+ + D+ ++R
Sbjct: 304 PESEAREGLLLLADYIIER 322
>gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 325
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 175/321 (54%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ +M+ + + S V ++ V ++++ + GK++RPM A ++
Sbjct: 5 VEEIKRPIGAEMKLFEQKFYESMQSKVPLLDKVTRFIVTTKGKQMRPMFAFLCAKLVGDV 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVD+S RR + +W N+ +VLVGD+LLS++ +
Sbjct: 65 NEKTYRGASMIELIHTATLVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKSVLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K + L +S ++EGEL QL ++ LD+TEE Y +I+ KTA L +A E+
Sbjct: 125 STDNKDFDLLSVISTTIREMSEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L GV ++ + ++ +G G+AFQ+ DD+ D N +GK +G D + K TLP+I
Sbjct: 185 VLSNGVDETMAKKMRDFGTYTGMAFQIKDDLFD-YLSKNIIGKPVGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++++ ++ TI + + +K+ ++++ L + QKAKD L
Sbjct: 244 TLKSANEKDRKYYFDTIKRHNHNPKRVKELIDFVKQSGGLDYAMGVMKDFQQKAKDILEE 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PDS K SL ++D+ ++R
Sbjct: 304 FPDSEAKTSLNLMLDYVIERK 324
>gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 324
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 162/321 (50%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + KDM+ + + + I D +++ + +L+ +GGKRLRP+ L Y
Sbjct: 3 LLDIFGALKKDMDFIERQLYRSIDGDDDLLSETSLHLLKAGGKRLRPVFVLLGGKFGNYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A
Sbjct: 63 LQKLQYIAVPLELIHSASLVHDDVIDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQ 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E + L+ ++ GE+ Q+ N + + +YL I+ KTA+L + + ++
Sbjct: 123 VSELANPYIHRILAKAMVQMSIGEMEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A V L YG N+G+AFQ+ DD+LD G +GK G D R G TLPV+
Sbjct: 183 AMAADAPAKVSALLYRYGYNVGMAFQIRDDLLDLFGTEKTIGKPPGSDMRQGNITLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q RE + ++ +A ++R + + E A Y KA +L+
Sbjct: 243 ALQEPDLREPLLREIRGIQAGDGSGDVSRAIEMIRTSPGIGKAEALADRYIAKALAALQQ 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD++ + L ++ +F +R
Sbjct: 303 LPDTAARSHLQDIAEFVNKRS 323
>gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
Length = 324
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDGKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVDSDSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVAALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 320
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 131/322 (40%), Positives = 198/322 (61%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + + E+VN LI+ ++ SDV+M+ ++ Y++ +GGKRLRP+L L TA
Sbjct: 1 MQDIRSAVAAEFEQVNHLIIDQLHSDVDMVENIGHYIVDAGGKRLRPLLVLLTAAAFGRC 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + + A IEFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDFL ++AF +
Sbjct: 61 GPDQIKFAAVIEFIHTATLLHDDVVDISSLRRGRPTANAEFGNAPSVLVGDFLYTRAFQL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L ++ T+AEGE+ QL + N D TE+ YL VI KTA+LF+A +
Sbjct: 121 MVQLGDMDILTHMANTTNTIAEGEVLQLVRAGNADTTEQQYLDVITRKTAILFAAGCYGA 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + ++SV Q + S+G+NLGIAFQ++DD+LDY G+ MGKN+G+D GKPTLP+I
Sbjct: 181 ATLCHQESSVCQGMHSFGLNLGIAFQMIDDILDYEGDPAAMGKNVGDDLTEGKPTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GTK E+ + I + + E++++ ++ AL ++ +A Y A L
Sbjct: 241 TLEHGTKEEQALVRRAIT--EKTAEDIEQVLAAVQRCGALNYSKQQARKYHNLALAELAA 298
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS + SL V + R +
Sbjct: 299 LPDSPARASLQAVTALSINRDH 320
>gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
Length = 349
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +M+ + + + S + ++V+Y GGKRLRP L L T L
Sbjct: 31 LNTLYAPVAAEMQLIEQRLRTELSSKHPFVDELVRYGCLLGGKRLRPALLLLTGKALGGI 90
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+ LA +E IHTATL+HDDV+D++ +RR W N++SVL+GD+L + AF +
Sbjct: 91 TPAHLTLATVVEMIHTATLVHDDVLDEAKVRRHLATVNARWDNESSVLLGDYLFTHAFHL 150
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + EGEL Q N +T+ +Y +I+ KTA L + + +
Sbjct: 151 ASTLDTVVGCRVIGRATNIVCEGELLQKGSRGNFRLTQSEYFEIIEGKTAELTACSCYLG 210
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + V + +G +LGIAFQ+ DD+LD GE GK++G D KPTLP+I
Sbjct: 211 AHFSAASVEVCDQMDGFGRDLGIAFQIADDLLDVLGEEKATGKSLGTDLEKQKPTLPLIY 270
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + ++ ++ ++K+ + + + +A Y ++A L
Sbjct: 271 TLEKASSHDRQELVEILSSESR---DMKQILPFIIKYGGIEFAREQAIRYARRAAGRLEY 327
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ + + +L + +F + R +
Sbjct: 328 LPNGNCRDTLQTMAEFVVSRSS 349
>gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis]
gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis]
gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis]
Length = 320
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 173/320 (54%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D+ KV + K + + + +L+ +GGKRLRP L Y
Sbjct: 3 SRLFQDIQNDLAKVEAELAKYADTSLPTLTAASSHLLHAGGKRLRPAFVLLAGRFHNYSL 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + LA A+E IH A+L+HDDVVD+S RRG + WGN+ S+ GD L +++ ++
Sbjct: 63 ERLLPLAVAMEMIHMASLVHDDVVDESKTRRGIPTVKARWGNRISIHTGDHLFARSLLLI 122
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + E L+ V+ + +GE++Q+S + +++ T DYL IK KTA+L SA+ ++ +
Sbjct: 123 AELNDDKISEVLAKVSVEMCKGEIQQMSGTFDVNQTFRDYLFHIKRKTALLISASCQLGA 182
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ S+ +ALK YG +LG+AFQ+ DD+LD + E+GK +G D R G TLP++ A
Sbjct: 183 MAVKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEAELGKPVGSDLRQGIITLPILEA 242
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + S E + +A I++ + A+ ++ A Y +KAKD L+ L
Sbjct: 243 ---LWETKDPLLRLLVAKRDKSQEEVGQAIEIIKNSGAIDRSQKIARRYLEKAKDELKRL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + +F +R
Sbjct: 300 PPVPTRDSLASIAEFIEKRT 319
>gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS]
Length = 321
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+
Sbjct: 3 LPELIAPIADDMKAVDTVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V
Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT ++ + I G+ + ++ AL A + + A+ +L
Sbjct: 243 VMETGTPEQRELIREAIKTGQ---ADFAAVAQAIQATDALAHARQAAENEAELARQALSA 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S ++KSL+E F + R
Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319
>gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 324
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRSVGYDNEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSMRI 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K++
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVAALDALPDSEAKEA 311
Query: 310 LMEVVDFCLQRLN 322
++ + L R++
Sbjct: 312 MIRLARESLVRVS 324
>gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y4.1MC1]
gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y4.1MC1]
Length = 321
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + + + SD + + +L+ +GGKR+RP+ L A Y
Sbjct: 3 LKAMYSFLNADLRAVEKELEETVRSDYAQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++ +
Sbjct: 63 IERVKHVAVALELIHMASLVHDDVIDDAELRRGRQTIKAKWSNRFAMYAGDYMFARSLEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ A L+ + GE+ Q+ D YL IK KTA+L +A+ ++
Sbjct: 123 MTRLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+
Sbjct: 183 AIAANAAKRTADRLYLFGYYVGMSFQITDDILDFTGTEAQLGKPAGSDLLQGNVTLPVLF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + K + + +K+ ++++ A+ + + Y QKA L
Sbjct: 243 AM---EDERVRERITAAVHPKTTPDEMKEIIALIKQTDAIEKSYALSDRYLQKAFRVLET 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + +L ++ + +R
Sbjct: 300 LPKNKARSTLYDIAKYIGKR 319
>gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
51756]
gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
51756]
Length = 322
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 121/319 (37%), Positives = 180/319 (56%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ L DM+ VN +I ++I S V IP + YLI +GGKRLRP++ L A M RG
Sbjct: 4 DTVKGLVEADMQAVNRVIHEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA +EFIH+ATLLHDDVVD S LRR A +WGN +VLVGDFL +++F M+
Sbjct: 64 PRPIPLAAVVEFIHSATLLHDDVVDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E + ++ +++GE+ QL + + D+ E Y VI +KTA LF AA + +
Sbjct: 124 VEDGDMRIMATMAEATSVISQGEVAQLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ ++ AL YG +G+AFQL+DD LDY+ E MGKN G+D +GK TLP I+A
Sbjct: 184 IVNAMEPEQELALARYGSLVGVAFQLMDDALDYQAEAATMGKNPGDDLVDGKATLPYIVA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
QR +++ ++ + D + E+L I+ A+ T A + A D LR
Sbjct: 244 MQRARPQDREVLRAALGDDRR--EHLPAVLEIIARTGAIDYTLQSARERAEAAVDCLRHF 301
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+ +L + F +QR
Sbjct: 302 GPGPERDALEFLARFSVQR 320
>gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 327
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 178/324 (54%), Gaps = 5/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
++ +++ ++M + + S V ++ + Y++ GK++RPM A ++
Sbjct: 5 IEQIKEPIAQEMATFEDKFRQSMSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLISNG 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 65 IINERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL- 177
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A
Sbjct: 125 LLSIDNNDFDLLKIISVAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCA 184
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +A ++ + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP
Sbjct: 185 MGACSVAPENTTLIEKMRLFGECVGMAFQIKDDLFDYT--EEAIGKPTGIDIKEQKMTLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+I ++++++ ++I + + +K+ ++ + + T+ + +Y +KA
Sbjct: 243 LIYVLNTVKEKDRHWLINSIKNYNTDKKRVKEVIAFVKAHGGIERTQEKMRAYQRKALAI 302
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L P S +KK+L+++VD+ ++R
Sbjct: 303 LDDFPASPFKKALLQIVDYVIERT 326
>gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
C56-T3]
gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
C56-T3]
Length = 320
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y
Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++
Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++
Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+
Sbjct: 183 ALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E+ K T + E + +++ A+ + + Y +KA L
Sbjct: 242 ---YALCDEQVRAKITAVNADTDAEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + L ++ + +R
Sbjct: 299 LPANEARTLLHDLALYIGKR 318
>gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
43768]
gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
43768]
Length = 324
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDGKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVDSDSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHNYVVRSDALAYSIGEARKAVDCAVAALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
238]
gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
238]
Length = 332
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 142/321 (44%), Positives = 204/321 (63%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 12 DRLAAALTDEMDAVNVLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAKMCGYG 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +
Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ + +L +E YL +++ KTA LFSAALEV
Sbjct: 132 MVETGSLRVLDILANASATIAEGEVLQLTAASDLATSEAVYLQIVRGKTAALFSAALEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IA ++ +AL YG LGI FQ+VDD+LD + +GK++G+DFR K TLPVI
Sbjct: 192 GVIAQQDEALVKALYDYGDALGIGFQIVDDLLD-YSGTDAIGKDVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FW TI G+ +L+ A ++ ++ L T+ A ++ +KAK +L
Sbjct: 251 AVALADATERAFWVRTIEKGRQEDGDLQTALGLLVKHGTLDATKSDALAWMEKAKAALAP 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K L+++ D+ + R+
Sbjct: 311 LPDHPIKLMLLDLADYVVARI 331
>gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus
thermodenitrificans NG80-2]
gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
G11MC16]
gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
G11MC16]
Length = 320
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + KD+ V + + + S+ + + +L+ +GGKR+RP+ L A Y
Sbjct: 3 LKAMYSFLSKDLAAVEQELERTVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++
Sbjct: 63 LERIKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLER 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E A + L+ + GE+ Q+ + YL I+ KTA+L +A+ ++
Sbjct: 123 MAELDDPRAHQVLAKTIVEVCRGEIEQIKDKYWFEQPLRTYLRRIRRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG SV + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+
Sbjct: 183 ALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNITLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E+ T + + + + ++ A+ + + Y +KA L
Sbjct: 242 ---YALRDERLKAAITAVSPETNADEMAAVISAIKRTDAIDQSYALSDRYLEKALRLLGE 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + L ++ + +R
Sbjct: 299 LPANKARTLLHDLALYIGKR 318
>gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
HLK1]
gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
HLK1]
Length = 335
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 143/321 (44%), Positives = 207/321 (64%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM V+ LI + + S V +IP + +LI KRLRP+LT+A A + R
Sbjct: 14 IDALMALAGPDMAAVDALIREHMDSPVPVIPALADHLIAGSAKRLRPLLTIAAARLAGAR 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + LA A+EFIHTATLLHDDVVD S LRRG+VAA L+WG +SVLVGDFL ++AF +
Sbjct: 74 DDSCLKLAAAVEFIHTATLLHDDVVDSSQLRRGRVAAHLIWGAPSSVLVGDFLFARAFEL 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S ALE L+ + ++EGE+ QL+ S +LD+T+E Y+ +I +KTA LF+AA E
Sbjct: 134 MVGAGSMAALEILARASRVISEGEVLQLTRSHDLDLTQEVYIEIIGAKTAELFAAAAEAG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG +AL+ +G +LG+AFQLVDD LDY G+ +GKN G+DFR GK TLP++
Sbjct: 194 AVAAGASPERCRALRRFGQDLGLAFQLVDDALDYSGDAKTLGKNAGDDFREGKVTLPLLY 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R E++FW+ T++ + + + +A +M + RAL DT A Y AK +L
Sbjct: 254 AMARTGAAERDFWQRTVDRREQTEADFDRARELMGQTRALDDTLALAARYADSAKAALAD 313
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P +SW+ +L ++ DF + R
Sbjct: 314 FPSNSWRPALEDLADFSVARK 334
>gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus
kaustophilus HTA426]
gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination
protein C3) [Geobacillus kaustophilus HTA426]
Length = 320
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y
Sbjct: 3 LKAMYSFLNDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++
Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++
Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+
Sbjct: 183 ALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E+ K T + E + +++ A+ + + Y +KA L
Sbjct: 242 ---YALCDEQVRAKITAVNADTDAEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP + + L ++ + +R
Sbjct: 299 LPANEARTLLHDLALYIGKR 318
>gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
Length = 332
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 121/321 (37%), Positives = 179/321 (55%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ +
Sbjct: 13 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F +
Sbjct: 73 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++
Sbjct: 133 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLRVIERKTAILFAAAAQLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI
Sbjct: 193 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + I+ G + + +R +L + RA +Y A+ +L
Sbjct: 253 AMTHSDAATCERLRMIISKGDRDA--MPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L ++ +L + + +QR
Sbjct: 311 LLETEAVAALRGLARYAIQRT 331
>gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-03]
gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-07]
gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-22]
gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-26]
gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-32]
gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-12]
Length = 356
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 138/324 (42%), Positives = 194/324 (59%), Gaps = 4/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y
Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90
Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++
Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F ++ S + LS + TLAEGE+ Q++ +L + E YL VI KTA LF+AA
Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVEQYLQVIYGKTAALFAAA 210
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL
Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A+ G + ++ FW+ I + +L+ A + + A+ T A Y KA++
Sbjct: 271 PVLAAYDAGDEEDRIFWRRVIEECDQHPGDLEAALDRIAKTNAIGITLKCAEDYAAKARE 330
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L PD + K L+E + R
Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354
>gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
19865]
gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
19865]
Length = 358
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 124/322 (38%), Positives = 179/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 39 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 98
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA +EFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 99 GPEHHQLAAIVEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 158
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 159 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 218
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I
Sbjct: 219 ALASGADAHVQQRLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 278
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + L + RA Y A+ +L
Sbjct: 279 AMAHSDATTRERLRQIVEQG--DAGAMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALDG 336
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 337 LPASPAVAALRGLARYAVERTH 358
>gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
Length = 326
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 167/321 (52%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ +M+ + + S+V ++ ++ Y++ GK+LRPM +A +
Sbjct: 7 IKEIQAPIADEMKAFEQKFRQFMKSEVMLLDQIMNYIVRRKGKQLRPMFVFLSAGVCGNI 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 67 SESTYRGGAMIELLHTATLVHDDVVDDSNYRRGFFSVNALWKNKIAVLVGDYLLSRGLLL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L+ +S L+EGEL Q+ ++ LD+ EE Y +I+ KTA L ++ V
Sbjct: 127 SVDHEEFKILKIVSTAVRELSEGELLQIEKARRLDINEEVYYEIIRQKTASLIASCCAVG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G V + ++G +G+AFQ+ DD+ DY + +GK +G D + K TLP+I
Sbjct: 187 ASSVGAAKEVVDKMHAFGEKVGMAFQIKDDLFDYGEDE--IGKPLGIDIKEKKMTLPLIY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A EK + I + + + ++++ L + Y ++A L
Sbjct: 245 ALNHAPWLEKRRIINIIRNESHKPNKVSEVIAFVKDSGGLRYAQEVMERYVKEALALLNE 304
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
DS ++SL ++V + ++R
Sbjct: 305 FADSPHRRSLEQLVQYTIERS 325
>gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
Length = 336
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 146/305 (47%), Positives = 206/305 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT M VN +IL+R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y
Sbjct: 15 LEPMLSLTANGMNSVNSVILERMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAALVGYE 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S LRRGK AA +V+GN +VLVGDFL S+AF +
Sbjct: 75 GTRHHKLAAAVEFIHTATLLHDDVVDGSELRRGKAAANIVFGNPATVLVGDFLFSRAFEL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ LS + +AEGE+ QL+ + ++ +EE YLH+I +KTA LF+AA ++S
Sbjct: 135 MTEDGSLRVLKILSHASAVIAEGEVSQLTAQRQIETSEERYLHIIGAKTAALFAAASQIS 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + +AL+ YG NLG+AFQLVDD +DY + +MGK+ G+DFR GK TLPVIL
Sbjct: 195 AVVAECSDEEERALEDYGRNLGVAFQLVDDAIDYDSDAAQMGKDQGDDFREGKMTLPVIL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A RG + E+ FWK I + S E+ +A ++ ++ AL DT +A + Q+A D++
Sbjct: 255 AHARGDEAERKFWKDAILGHRSSDEDFAEAIRLIEKHNALEDTREKARHFAQRAIDAISI 314
Query: 301 LPDSS 305
DS
Sbjct: 315 FADSK 319
>gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822]
gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis]
Length = 321
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+
Sbjct: 3 LPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V
Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG +G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGASPEQETAAAAYGRRVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT ++ + I G+ + ++ AL A + + A+ +L
Sbjct: 243 VMETGTPEQRELIREAIKTGQ---ADFAAVAQAIQATDALAHARQAAENEAELARQALSA 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S ++KSL+E F + R
Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319
>gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Rhodobacterales bacterium HTCC2654]
Length = 331
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 143/322 (44%), Positives = 204/322 (63%), Gaps = 2/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L D+ +V+ +I R+ S+ IP+V +L+ +GGKRLRPMLTLA+A + Y
Sbjct: 11 ERLAAHLKDDLSQVDEMIRARMASEHAPRIPEVTAHLVDAGGKRLRPMLTLASARLCGYE 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +
Sbjct: 71 GGHHIHLATAVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E S L+ LS + T+ EGE+ QL+ +++L TE+ Y V++ KTA LF+AA EV
Sbjct: 131 MTEADSLRVLQVLSNASATITEGEVLQLTAAQDLGTTEDTYFKVVRGKTAALFAAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AGV +AL YG LGIAFQ+VDD+LD + GKNIG+DFR K TLP+I
Sbjct: 191 GILAGVSEDRIKALHDYGDALGIAFQVVDDLLD-FWGGDATGKNIGDDFRERKLTLPIIK 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A RG E+ FWK T+ +L++A IM + AL DT A + +AK L
Sbjct: 250 AIARGDDEERAFWKRTLEKNDQRDGDLERALEIMTAHGALDDTRAAALDWAARAKACLDA 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+ + L ++ D+ + RLN
Sbjct: 310 LPEDPIRDMLSDIADYVVARLN 331
>gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 358
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 139/324 (42%), Positives = 203/324 (62%), Gaps = 4/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L D DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA A + +Y
Sbjct: 33 LRDLSDYLGDDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLAAARLCDYP 92
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
HV LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++
Sbjct: 93 AGPEHQRHVSLAACVEFIHTATLLHDDVVDESLLRRGLASANAVFGNKASVLVGDFLFAR 152
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F ++ + S + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA
Sbjct: 153 SFQLMTDDGSLKVMAILSSASATIAEGEVLQMSTQNDLSTSVEQYLEVIHGKTAALFAAA 212
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
V +++A + AL+S+G NLG+AFQLVDD LDY + +GK +G+DFR GK TL
Sbjct: 213 CRVGAVVAERPEAEELALESFGTNLGMAFQLVDDALDYAADQAVLGKTVGDDFREGKITL 272
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A+ G + E+ FW+ I + + E+L +A ++ + A+ T RA Y Q A+D
Sbjct: 273 PVLAAYAAGDEEERVFWRRVIEQSEQAPEDLDRALALIAKTDAIGVTLDRAALYAQAARD 332
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L PDS ++ L + + + R
Sbjct: 333 ALEIFPDSRLRRLLQDTAAYTVSR 356
>gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1]
gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1]
Length = 320
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 90/320 (28%), Positives = 169/320 (52%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM+ D++ + + I S ++ + +L+ +GGKR+RP+ L +A +Y
Sbjct: 4 KMIYSFLKADIDLIEKELKTAIDSRSPLLNEASLHLLSAGGKRIRPVFVLLSAKFGDYNI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ +A A+E IH+A+L+HDDV+DD+ LRRGK + W N+T++ GD++ +++ +
Sbjct: 64 NSIKNVAVALELIHSASLVHDDVIDDADLRRGKPTIKSQWDNKTAMYTGDYIFARSLEYM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +++A + LS L GE+ Q+ + +DYL IK KTA+L + + ++ +
Sbjct: 124 TKIDNEDAHKILSNAIVELTVGEIEQIKDKYRFEQDLKDYLRRIKRKTALLIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG + + L +G N+G++FQ+ DD+LD+ E+GK G D G TLPV+
Sbjct: 184 IAAGAPPEIHKKLYRFGYNVGMSFQITDDILDFTASEEELGKPAGSDLLQGNITLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ K + ++ + LK ++ A+ + + Y +KA L L
Sbjct: 242 --FAMEQRDLREKLIKIEEEVDRDYLKAVIEDIKSCGAIEQSHEISARYLKKAMKELEGL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + K+L ++ +F +R
Sbjct: 300 PKNGANKTLKDIANFIGKRK 319
>gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190]
gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579]
gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902]
Length = 324
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 125/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDGKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++++ S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVDSDSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPE 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + S +K + + AL + A A +L LPDS K +
Sbjct: 254 ANDVRTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
HTCC2207]
gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
HTCC2207]
Length = 331
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 123/332 (37%), Positives = 192/332 (57%), Gaps = 13/332 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M D VN LI+ + S+V ++ ++ Y++ SGGKRLRP++ L +AL Y+
Sbjct: 1 MLSFHKAVESDFSAVNELIIANLQSNVGLVENIGHYIVGSGGKRLRPVVVLLSALASGYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ +A IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDF+ S+AF M
Sbjct: 61 GKQHLTMAAVIEFIHTATLLHDDVVDVSALRRGRETANNQWGNAPSVLVGDFIYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + ++ ++EGE++Q+ + N + E Y VI KTA LF AA +
Sbjct: 121 LVDVGDMPIMGVIADATNLISEGEVQQMGNAGNSAIDEATYYEVIYRKTAKLFEAAARIG 180
Query: 181 SL-----------IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ + + ++ A+ +YG +LG+AFQ+ DDV+DY+G+ +GKN+G+D
Sbjct: 181 AMLAAEEADLFVGDSAILDARTDAMAAYGKHLGLAFQIADDVMDYQGDSQSIGKNVGDDL 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK TLP+I A ++K S I S E+ +K +R++ +L + +A
Sbjct: 241 AEGKMTLPLIHARDHLDDQKKQLICSAIESK--SAEHFEKILAAVRQSSSLEYSVTQAQE 298
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ AK SL +P+S +K+ L ++ DF + R+
Sbjct: 299 QAELAKQSLAQMPESDFKEVLSDLADFAVSRI 330
>gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
39073]
gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
39073]
Length = 322
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 4/322 (1%)
Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L D+++V +L+++ + ++ ++L+ +GGKRLRP + A
Sbjct: 1 MKELALWQEVQADLQQVEAELLRQVDAPDPVLSQAARHLVQAGGKRLRPAFAILAARCCG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + LA A+E IH ATL+HDDV+D S +RRG+ WG + S+ GD+L +++
Sbjct: 61 APLERILPLAVALEMIHMATLVHDDVIDASPIRRGRPTVWARWGQELSLHTGDYLFARSL 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+V L+ V+ + +GE++Q++ + +LD+T DYL I KTA+L +A+ E
Sbjct: 121 ILVATYDDPRIPSVLASVSVKMVQGEIQQMAAAFDLDITLRDYLDRIYRKTALLIAASCE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++ AG + + L+ YG NLG+AFQ+ DDVLD + ++GK IG D R G TLP
Sbjct: 181 LGAIAAGADTATIRHLRYYGRNLGLAFQITDDVLDMVADPEQLGKPIGGDLRQGVITLPA 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A Q K+ + + +++A ++++ + A Y ++A+
Sbjct: 241 IYALQASPKK--QKLIHLLGKRDKTQAEIQEAIQLIKDCGGIKYALDIAEGYLERARKQA 298
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP + +L + + R
Sbjct: 299 SYLPPGVARDTLTSLTYYIRTR 320
>gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2]
gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
Length = 321
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 134/322 (41%), Positives = 192/322 (59%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L D+E + LIL ++ SDV +I + Y+I SGGKRLRP+L L +A +Y+
Sbjct: 3 LSQIRKLIQDDIEATDQLILSKLSSDVVLINQIGHYIINSGGKRLRPLLVLLSAHACDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H+ LA IEFIHT+TLLHDDVVD+S RRG A VWGN SVLVGDFL S++F M
Sbjct: 63 GKDHLTLAAVIEFIHTSTLLHDDVVDESETRRGNQTANEVWGNAASVLVGDFLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E +E +S +AEGE+ QL + D T + Y+ VI KTA LF AA +
Sbjct: 123 MVEPGIMRVMEVMSETTNVIAEGEVLQLLNCHDADTTSQRYMEVIHRKTAKLFEAATLLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ YG +LG AFQL+DD LDY + +E+GKN+G+D GKPTLP+I
Sbjct: 183 PILGKKPELESAFSS-YGRHLGAAFQLIDDALDYTADADELGKNLGDDLAEGKPTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT+ EK+ + I I + LK+ I++ + A+ T+ A +KAK +L
Sbjct: 242 VLENGTENEKSLIRKAIETEGI--KLLKEVTSIIQTSGAIQYTQEVATQEAEKAKAALAP 299
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS K++L+ + D +QR +
Sbjct: 300 LNDSEIKQALLSLADLAVQRNH 321
>gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140]
Length = 324
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 188/313 (60%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPG 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G ++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGFEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + +K + + AL + A A +L L DS K +
Sbjct: 254 ANDVRTALENADR--GYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDALSDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
Length = 325
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 169/319 (52%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++ +M+ + + S+V ++ + Y++ GK++RPM A ML
Sbjct: 6 DLIKAPIANEMKLFEDKFFESMKSNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEVN 65
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A IE IHTATL+HDDVVDDS +RRG + +W N+ +VLVGD+ LS+ +
Sbjct: 66 EKTYRAASFIELIHTATLVHDDVVDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTLIIS 125
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ K + LE +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + +
Sbjct: 126 TQNKDFDLLETVSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L N V + L +G +GIAFQ+ DD+ DY N +GK +G D + K TLP+I
Sbjct: 186 LSVSSDNMVAERLHKFGELVGIAFQIKDDLFDYTQS-NLIGKPVGIDIKEQKMTLPLIYT 244
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
TK K + ++ + + +++ +++N + T+ Y Y +A L
Sbjct: 245 LNTTTKENKKWLIQSVKKHNNNKKRVREVIEFVKQNGGIEYTKKMMYQYANEAIAILHEF 304
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P + + +L +V + ++R
Sbjct: 305 PQNECRDALELMVQYVMER 323
>gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 334
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 116/324 (35%), Positives = 186/324 (57%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ + D + ++ +I +R+ S V +I + Y+I +GGKR+RP L + A L
Sbjct: 10 LSQILTPIALDFKALDEVIRQRLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANG 69
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + + ++ +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF
Sbjct: 70 KQTPHILEMSAVVEFIHTATLLHDDVVDESTLRRGRKTANAAFGNAASVLVGDFLYSRAF 129
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M+++ ++ LS T+AEGE+ QL + +V EE YL VI+ KTA LF A+ E
Sbjct: 130 QMMVDPNDLRVMQILSDATNTIAEGEVLQLLNMNDPEVDEESYLQVIRYKTAKLFEASTE 189
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++A N+ R+ ++G ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+
Sbjct: 190 LGAILANATNAQREQAAAFGRHIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPL 249
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I + G+ E+ ++ I + +++ + ++ + AL T+ A A
Sbjct: 250 IYLLENGSSEEQLLVRAAIEQNQDLPDDVFAQILAAVQNSGALEYTQAAAKREADLAMSY 309
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L+ P + ++L + + L R
Sbjct: 310 LKDFPANPASQALEALCAYSLTRQ 333
>gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB]
gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB]
Length = 341
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 137/322 (42%), Positives = 201/322 (62%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L L DM+ V+ +I R+ SDV ++ V +Y+I SGGKR+RP L L A L+Y+
Sbjct: 22 LEQLYALIGPDMKAVDAVIRDRLYSDVVLVRQVAEYIISSGGKRMRPALVLLAAGALDYQ 81
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H +A +EFIHTATLLHDDVVD+SALRRG+ A ++GN SVLVGDFL S+AF M
Sbjct: 82 GTRHQEMAAVVEFIHTATLLHDDVVDESALRRGRDTANAMFGNAASVLVGDFLYSRAFQM 141
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++ LS +AEGE+ QL + DV E Y+ VI KTA LF AA ++
Sbjct: 142 MVAVDNMRVMQVLSDATNVIAEGEVLQLMNCHDADVDEARYMQVIHYKTAKLFEAAAQLG 201
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ V +AL +YGM+LG AFQL+DDVLDY G+ + GK+IG+D GKPTLP+I
Sbjct: 202 AILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGKHIGDDLAEGKPTLPLIY 261
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q GT + + I +G + + +R + AL + RA + AK +++C
Sbjct: 262 VMQHGTPEQAACVRKAIEEGGRD--DFPQVLDAIRNSGALDHAKARAIQEAELAKSAIQC 319
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L DS++KK+L+++ F ++R +
Sbjct: 320 LGDSNYKKALLQLTLFAVERNH 341
>gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73]
gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas
albilineans]
Length = 331
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 125/322 (38%), Positives = 184/322 (57%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ DM V+ LI R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 12 LPQIQMFAAPDMAAVDALIRHRLASDVVLINQIADHIISAGGKRLRPMLVMLAGRACGSH 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 72 GPKHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 132 MVELDSMAVMRLLADTTNRIAEGEVLQLLHVHNPDTDEAAYLQVIERKTAVLFAAGTRLG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG ++V+Q L +YGM+LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I
Sbjct: 192 ALAAGATDAVQQCLYAYGMHLGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIH 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + ++ + L + RA Y A+ +L
Sbjct: 252 AIAHADASTRARLRQIVEHG--DADAMPEVLTAIQASGGLDYSRRRAAEYAAAAERALDS 309
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD+ +L + + ++R +
Sbjct: 310 LPDNDAVAALRGLARYAVERKH 331
>gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
Length = 324
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 189/313 (60%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPG 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + +K + + AL + A A +L L DS K +
Sbjct: 254 ANDVRTALENADR--GYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDALSDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
SS9]
gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
SS9]
Length = 323
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G
Sbjct: 4 KAIQALTANDMAGVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKDTANAAFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+S + L+ +S +AEGE++QL + + TE++Y+ VI SKTA LF AA ++S+
Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVQQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + + I ++ L MRE +L T+ RA +KA +L +
Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEAEKAIAALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+S +K++L+++ ++R
Sbjct: 303 AESDYKEALIQLAHLAVKRT 322
>gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
Length = 356
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 4/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y
Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90
Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++
Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F ++ S + LS + TLAEGE+ Q++ +L + + YL VI KTA LF+AA
Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVDQYLQVIYGKTAALFAAA 210
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL
Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A++ G + ++ FW+ I + +L+ A + E A+ T A Y KA++
Sbjct: 271 PVLAAYEAGNEEDRIFWRRVIEECDQHPGDLEAALGRIAETNAIGITLKCAEDYAAKARE 330
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L PD + K L+E + R
Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354
>gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090]
gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945]
gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02]
gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18]
gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19]
gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11]
gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18]
gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1]
gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1]
gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332]
gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679]
gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035]
gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2]
gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA
1090]
gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945]
gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 324
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 189/313 (60%), Gaps = 2/313 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++
Sbjct: 134 LEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPG 193
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++
Sbjct: 194 HEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQV 253
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
N ++ + + +K + + AL + A A +L L DS K +
Sbjct: 254 ANDVRTALENADR--GYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDALSDSEVKDA 311
Query: 310 LMEVVDFCLQRLN 322
++++ L R++
Sbjct: 312 MIQLAKESLVRVS 324
>gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
Length = 320
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 171/320 (53%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M KD++ V I + S ++ +L+ +GGKRLRP L Y
Sbjct: 1 MLDFFSQVRKDLQVVEHEIKTIVQSRDPLLTQTSIHLLNAGGKRLRPAFALLAGKFYHYS 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + LA A+E IH ATL+HDDVVDDS RRG + WGN+ S+ GD+L +++ +
Sbjct: 61 LEKLLPLAVALELIHMATLVHDDVVDDSLTRRGTPTVKANWGNRISMHTGDYLFAKSLVL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ + L+ + + EGE+ Q+S + + + + DY + IK KTA+L +A+ ++
Sbjct: 121 ISQYENPLIAQVLADTSVMMCEGEMHQISTAYSAEQSWRDYFYRIKRKTALLIAASCQLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + L+ YG +LG+AFQ+ DD+LD + + +GK IG D R G T+PVI
Sbjct: 181 AVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVADQSLLGKPIGGDLRQGILTMPVIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ +R ++ + + + + E +K+A I++E + Y +KAK +L
Sbjct: 241 SLERS--PQRTRLRQLVEIEEKTDEQVKEAIEIIKEAGGIEYAFNATKQYIEKAKKNLTH 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+ K++ ++ DF R
Sbjct: 299 LPNKPVKETFYQIADFIGIR 318
>gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911]
gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911]
Length = 320
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KM+ D+ + + + + ++ ++ + +L+ +GGKR+RP+ L +A Y
Sbjct: 3 LKMMYSFLDSDINIIEQSLEETVQAESPLLRNASMHLLQAGGKRIRPVFVLLSAKFGSYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A A+E IH A+L+HDDV+DD+ LRRGK + W N+T++ GD++ +++ +
Sbjct: 63 ISEIKKVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRTAMYTGDYIFAKSLEV 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + EA E L+ + GE+ Q+ D DYL IK KTA+L +A+ ++
Sbjct: 123 MTEIERPEAHEILAKTIVEVCVGEIEQIKDKYRFDQNLRDYLLRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV S+ + L +G +G++FQ+ DD+LD+ G E+GK G D G TLPV+
Sbjct: 183 AVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFTGTEKELGKPAGGDLLQGNITLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E + + + + ++K +++ + A+ + + Y KA L
Sbjct: 242 ---FAMEDEDIRREIVKVNETMDRKEIEKVISLIKNSGAIERSFTVSNQYLSKALAVLDT 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + KKSL ++ F +R
Sbjct: 299 LPQNRAKKSLRDIAKFIGKRK 319
>gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 332
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E +++GKN+G+D GK TLP+I
Sbjct: 193 ALASGASEQVQQQLYDYGMQLGFAFQIADDVLDYAAEASDLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332
>gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus
licheniformis ATCC 14580]
gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
licheniformis ATCC 14580]
gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2]
gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus
licheniformis ATCC 14580]
gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580]
gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2]
Length = 320
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 167/321 (52%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ D+E + + K + SD ++ + +L+ +GGKR+RP+ L + + EY
Sbjct: 3 LTTFYSFLNDDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVLLSGMFGEYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A ++E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++
Sbjct: 63 ISKIKNVAVSLELIHMASLVHDDVIDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEA 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + +A E LS + GE+ Q+ N++ YL I+ KTA+L +++ ++
Sbjct: 123 MTKINEPKAHEILSKAIVEVCLGEIEQIKDKYNMEQNLRTYLRRIRRKTALLIASSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG ++ + L +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 183 AIAAGAGENIHKTLYWFGYYVGMSYQIIDDILDFTSSEKELGKPVGSDLLQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
K + + + + + + E +K +++ A+ + + Y KA + L
Sbjct: 242 ---YARKSPELKARLMLVNSETTPEQIKPVIEELKKTDAIEQSFRVSEMYLNKAFELLET 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + + +L ++ + +R
Sbjct: 299 LPKNRARTALGQIAKYIGKRK 319
>gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
Length = 323
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ +++ + + S V ++ + Y++ GK++RPM A
Sbjct: 4 LEEIKKPIATELDDFEIKFKESMRSSVPLLDRITHYIVKRKGKQMRPMFVFFAAGACGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTATL+HDDVVD+S RRG + +W N+ +VLVGDFLLS+ +
Sbjct: 64 NESTHRGAALVELVHTATLVHDDVVDNSYQRRGFFSVNALWKNKIAVLVGDFLLSKGLSL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E L L+ ++EGEL Q+ ++ LD+ E Y VI+ KTA L ++
Sbjct: 124 SVKNQDFEFLRILNEAVTEMSEGELLQMEKARRLDIDEGVYFEVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + + +G +GIAFQ+ DD+ D+ +++GK +G D + K TLP+I
Sbjct: 184 AASTNAPSELVTKMHDFGEKVGIAFQIKDDLFDFGF--DDVGKPLGIDIKEKKLTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +K +K + + + + + + +R + L + SY +A + L
Sbjct: 242 ALNNTSKEKKRTIINLVKNHNEDQKKVMEVIEFVRNSGGLAYAREKMLSYQAEAFNILEA 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S +K L ++V F +R
Sbjct: 302 FPESEYKTGLEQLVRFTTER 321
>gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 332
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGATVEVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPEVLAAIHATGGLDYSRQRAAEYAAAAELALNT 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332
>gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 332
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332
>gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
Length = 332
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 161/320 (50%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ ++++ + + V ++ V +YL+ GKR+RP+L L TA +
Sbjct: 14 LKDIQRPVAEELKHFQRYFRDAMRTSVPLLDHVARYLLRQKGKRIRPLLVLLTAKLCGGI 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +H+ATL+HDDVVD + RRG + +W N+ +VL GDFLLS+ +
Sbjct: 74 TEATYRAAALVELLHSATLVHDDVVDGAEQRRGMFSINAIWKNKVAVLFGDFLLSRGLLL 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L ALS ++EGEL Q+ S++LD+ E Y +I KTA L +A +
Sbjct: 134 ALDHRDYDTLHALSDAVRRMSEGELLQIEKSRHLDIDEATYFRIISDKTASLIAACTKSG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A V + G LG+AFQ+ DD+ DY E GK IG D + K TLP+I
Sbjct: 194 ALSATDDPRVIDEMYLMGEKLGLAFQIRDDLFDYGEEA---GKPIGNDLKEKKLTLPLIY 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ + K + ++++ + R + +A+ L
Sbjct: 251 ALRMAPSSERRRILRIVRKKKKTRDDIQTVADFAEAYGGMAYARARMEALAGEARAILER 310
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + +L+++VD+ + R
Sbjct: 311 YPPGDARDALIDLVDYTVTR 330
>gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
Length = 320
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+D+ +V I + + + + +L+ +GGKRLRP L L A Y + + L
Sbjct: 8 LREDLARVEEEIRRVVAGAPPPLREAALHLLAAGGKRLRPALALLCAHFGRYSLERVLPL 67
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E IH ATL+HDDV+D + +RRG WG +T++ VGD L +QA +V +
Sbjct: 68 AAAVELIHMATLVHDDVIDGAEMRRGIPTVHARWGPETAIKVGDVLFAQAIELVSSYEDS 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L+ ++ GE Q S + + Y I+ KTA+ AA E+ + +
Sbjct: 128 AVARKLAATCLSMCTGEFAQERESYSPQQSVWRYFRRIRRKTALFIGAACELGARVCEAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V QAL+ YG+ LG+AFQ+VDDVLD E +GK +G D R G TLPVI A+ R K
Sbjct: 188 LVVCQALRQYGLALGMAFQVVDDVLDLVAEERVLGKVVGGDIRQGIATLPVIYAWSRSKK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + S +++A I+RE + + A ++ KA LR LP +
Sbjct: 248 GRRLKEILCMRGK--SEAEVQEAIAIVREAGGIGFSLEVARAFAAKALRFLRPLPAIPQR 305
Query: 308 KSLMEVVDFCLQRL 321
+ L ++ +F + R
Sbjct: 306 RRLEQIAEFVITRS 319
>gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
SDF]
gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
AYE]
gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900]
gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056]
gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058]
gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059]
gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013150]
gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013113]
gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6014059]
gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
AYE]
gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii]
gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2]
gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013150]
gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013113]
gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6014059]
Length = 325
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MQNAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G + L K I++++ AL + RA + A +L
Sbjct: 246 ALAHSTGEEHAIIRRSIATGGVD--QLPKVIEIVQKSGALDYCQRRAQEETEAALQALSI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L R+
Sbjct: 304 LPDTPYRQALINLTRLALHRI 324
>gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans]
Length = 315
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 133/313 (42%), Positives = 196/313 (62%), Gaps = 4/313 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY----RGDNHVLL 67
M N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y HV L
Sbjct: 1 MLACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASARLCGYQPGPDHQRHVGL 60
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S
Sbjct: 61 AACVEFIHTATLLHDDVVDESTLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + LS + T+AEGE+ Q+ + +L E YL VI KTA LF+AA V +++A
Sbjct: 121 KVMAILSDASATIAEGEVLQMVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERP 180
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ +AL+ +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+
Sbjct: 181 EAEEEALERFGTNLGMAFQLVDDALDYAADQQVLGKTVGDDMREGKITLPVLAAYEAGSP 240
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ FW+ I +G+ + ++L A ++ + A+ T RA Y A ++L PDS +
Sbjct: 241 EDRIFWERVIGEGEQTEDDLPHALNLIAKTGAINTTIARAQVYADAAVEALSIFPDSELR 300
Query: 308 KSLMEVVDFCLQR 320
+ L+E V F + R
Sbjct: 301 RLLIETVQFTVNR 313
>gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 332
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 114/320 (35%), Positives = 179/320 (55%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DM+ V+ I + SDV + ++ +Y+ +GGKR+RP L + + L Y+
Sbjct: 14 VQRLLAPIADDMKAVDDYIRAELASDVSRMHEISEYITSAGGKRMRPALLILISRALGYK 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD L IE +HTATL+HDDVVD+S LRRG+ A WGN +VLVGDFL +++F M
Sbjct: 74 GDLCCYLGATIELLHTATLMHDDVVDESNLRRGRPTANARWGNGAAVLVGDFLYTRSFQM 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + ++AL+ A L+EGE+ Q+ + + V E Y VI+ KTA LF A ++
Sbjct: 134 MVRAGNLRVMQALADAANRLSEGEVVQMVNAHDPSVDETRYFRVIERKTACLFEAGARMA 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA +A+ Y + LG AFQ+ DD+LDY G ++GKN+G D R GK TLP+I
Sbjct: 194 AAIAECSKEQEEAVAQYALALGNAFQIADDILDYTGVAADIGKNLGADLREGKMTLPLIY 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T + + G K ++ + AL RA + ++ + +L
Sbjct: 254 TRELTTPEGRALIDEAVRKG---DGPFDKITKLVVDCGALDRCSLRAEAELERGRQALAK 310
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S + +SL+E++ F ++R
Sbjct: 311 LPPSIFNESLLELLSFTVRR 330
>gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
Length = 325
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 139/310 (44%), Positives = 193/310 (62%), Gaps = 2/310 (0%)
Query: 14 KVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KVN + + SD I V +LI +GGKRLRPMLT+A A + Y G +H+ LA +E
Sbjct: 17 KVNETLHSYMQSDAAPRIRQVSAHLIDAGGKRLRPMLTVAAARLCGYDGPHHIHLAATVE 76
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
FIHTATLLHDDVVDDS RRG+ A L+W N +SVLVGD+L S+AF ++ T S L A
Sbjct: 77 FIHTATLLHDDVVDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTITGSMPILAA 136
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L+ + T+AEGE+ QLS +++L T E Y+ + + KTA LFSAA V +++A +++ Q
Sbjct: 137 LADASATIAEGEVLQLSTARDLSATPETYIRIARGKTAALFSAATRVGAMLAEPGDAIVQ 196
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A+ YG LGIAFQ+ DD+LDY G +GKN G+D R GK TLPVI A + E+ F
Sbjct: 197 AMHDYGDALGIAFQIADDLLDYTGTDA-IGKNRGDDLREGKLTLPVIWALDKADAAERAF 255
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
W TI G + + A IM + +L+ T A + AK +L+ LP +++L E
Sbjct: 256 WTRTIGKGDVQDGDFDAALSIMDKRGSLLATADEARRWAGLAKAALQALPPQPLRETLEE 315
Query: 313 VVDFCLQRLN 322
+ D+ + RL+
Sbjct: 316 LADYVVARLS 325
>gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
23834]
gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
23834]
Length = 339
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 119/319 (37%), Positives = 191/319 (59%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +D+ +VN +I + + S+V +I + +Y+I +GGKRLRP+LT+ + +L Y D
Sbjct: 23 FQQHLPRDLSRVNAVIERAVQSEVALISQIGRYIISAGGKRLRPVLTILSGKVLGYDEDP 82
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 83 LYALAAMVEFIHTSTLLHDDVVDESELRRGRKTANNMFGNAAAVLVGDFLYTRAFQLMVS 142
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + L+ ++ +AEGE+ QL N ++TE +Y+ VI+ KTA LF AA +V +++
Sbjct: 143 SGSLKILDVMADATNIIAEGEVLQLMNIGNTNITEAEYVQVIQYKTAKLFEAAAQVGAIL 202
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ALK YG ++G AFQ++DDVLDY G + E+GKN+G+D GKPTLP+I Q
Sbjct: 203 AGATPEQENALKDYGRHIGTAFQIIDDVLDYSGNIEEIGKNVGDDLAEGKPTLPLIYLMQ 262
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + + S ++ + ++ AL A +A L LPD
Sbjct: 263 NAEPPVADAVRHALEHADRSY--FEQIHAHVVQSDALAYCVSEARKAVDEALSCLAALPD 320
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +++ ++ + L R++
Sbjct: 321 NEVSQAMRQLAEESLARVS 339
>gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
43184]
gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
43184]
Length = 324
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+E + ++ N + S+ + + ++ + GK +RP+L L TA
Sbjct: 5 SKIEQPVAVEFKRFNDEFAASLRSETNRLQSAIDQILNASGKHVRPLLVLLTAKACGQVT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + + + +S + L+EGE++QL ++ + E Y+ VI+ KTA+L SA E+ S
Sbjct: 125 IQTGNLQIIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACAEIGS 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG + + + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 185 ISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G + E IN+ + EN+ + N + E R Y KA + L L
Sbjct: 244 LQTGRREEAEHCLHIINEKDFTTENIDLLIDFAKANGGIEYAEQRMQVYHDKAVEVLMTL 303
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P+S ++ L+ + D+ ++R
Sbjct: 304 PESEAREGLLLLADYIVER 322
>gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 332
Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 127/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + +R L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPEVLAAIRATGGLDYSRQRAAEYAAAAEQALET 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S+ +L + + ++R +
Sbjct: 311 LPHSAAVAALRGLARYAVERTH 332
>gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
Length = 325
Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MQNAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G + L + I++++ AL RA + A +L
Sbjct: 246 ALAHSTGEEHAIIRRSIATGGVD--QLSQVIEIVQKSGALDYCHQRAQEETEAALQALSN 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L R+
Sbjct: 304 LPDTPYRQALINLTQLALHRI 324
>gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 332
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 144/321 (44%), Positives = 202/321 (62%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L +M+ VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A M Y
Sbjct: 12 DRLAAALSDEMDAVNVLITDRMASKHAPRIPEVTAHLVGAGGKRLRPMLTLAAAKMCGYS 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +
Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ + +L TE YL +++ KTA LFSAA+EV
Sbjct: 132 MVETGSLRVLDILANASATIAEGEVLQLTAASDLATTEAIYLQIVRGKTAALFSAAMEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG ++ +AL YG LGI FQ+VDD+LD + +GKNIG+DFR K TLPVI
Sbjct: 192 GVIAGQDAALVEALYDYGDALGIGFQIVDDLLD-YAGTDAIGKNIGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FW TI G+ +L A ++ ++ L T+ A ++ +KAK +L
Sbjct: 251 AVALADVEERAFWVRTIEKGRQEDGDLDAALGLLVKHGTLDATKSEALAWMEKAKAALAP 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K L+++ + + R+
Sbjct: 311 LPDHPIKPMLLDLAGYVVARV 331
>gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1]
gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter sp. ADP1]
Length = 325
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 116/321 (36%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-R 60
+ + D ++ I + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVASDFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGSTD 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ H LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF +
Sbjct: 67 LEQHRKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L+ S C +AEGE+ QL + + TE+ YL++I KT+ LF A E +
Sbjct: 127 LVDLNDMVLLKDFSTGTCEIAEGEVLQLQSQHDPETTEQTYLNIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-SGTPEYREPLRHFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q E + + +I G I L++ I++++ AL RA Q A +L+
Sbjct: 246 ALQHTQGEEHDIVRRSIATGGI--HQLEQVIQIVQQSGALDYCRKRAEEETQAALAALQH 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S +++L + L R+
Sbjct: 304 LPESEARQALFNLTQLALHRI 324
>gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
Length = 332
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 142/308 (46%), Positives = 202/308 (65%), Gaps = 2/308 (0%)
Query: 15 VNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA +EF
Sbjct: 25 VNTLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEF 84
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L
Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ A T+AEGE+ QL+ + +L TE+ YL V++ KTA LFSAA+EV IA + +QA
Sbjct: 145 ANAAATIAEGEVLQLTAASDLATTEDIYLQVVRGKTAALFSAAMEVGGEIADQDAATKQA 204
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L YG LGI+FQ+VDD+LD G GKN+G+DFR K TLPVI A E++FW
Sbjct: 205 LFDYGDALGISFQIVDDLLD-YGGTKATGKNVGDDFRERKLTLPVIRAIAAADAGERDFW 263
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
TI G+ +L A ++ ++ + T A ++ +KAK +L +PD + K+ L+++
Sbjct: 264 VRTIGKGRQEAGDLDHAIALLAKHGTMEATRLDALAWAEKAKSALDAIPDHALKQMLVDL 323
Query: 314 VDFCLQRL 321
D+ + R+
Sbjct: 324 ADYVVARI 331
>gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 325
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MANAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G + L + I++++ AL RA + A +L
Sbjct: 246 ALAHSTGDEHAIIRRSIATGGVD--QLSQVIEIVQKSGALDYCHQRAQEETEAALQALSN 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L R+
Sbjct: 304 LPDTPYRQALINLTQLALHRI 324
>gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
12809]
gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
12809]
Length = 324
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 120/320 (37%), Positives = 186/320 (58%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + E V ++ + SDVEM+ V +Y+ SGGKRLRP+ + +ALM Y
Sbjct: 3 INDVMKLVENEREAVEKNLIDNLDSDVEMVNKVAEYIFESGGKRLRPVFMILSALMCGYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + LA +E+IHTATLLHDDV+D + RRGK +A V+GN +VL GDFL S+AF
Sbjct: 63 GERTINLAGVVEYIHTATLLHDDVIDGAKYRRGKESANNVFGNDITVLCGDFLYSRAFMN 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ A L++ A T++EGE+ QL + ++ +T +DYL +I SKTAV+F+ E+
Sbjct: 123 LVKDGDSRAQMLLAVAARTMSEGEVFQLIKTADVKITMDDYLRIINSKTAVMFATCCEIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + ++AL +G LGIAFQ+ DD+LDY G+ + GK G D + GK TLP+I
Sbjct: 183 AILGEMPVEKQKALADFGKTLGIAFQMADDILDYLGDPEKTGKKPGTDLKEGKITLPIIT 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ EK ++ I D + S ENL +M +E Y Q+AK +L
Sbjct: 243 LLANAAEEEKKRVRNIIVDERSSEENLNYILDLMNTYDVKAKSELVVDKYIQEAKANLNL 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S ++ +L + D+ + R
Sbjct: 303 FEKSKYRDALDFLADYMVAR 322
>gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 331
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 167/314 (53%), Gaps = 2/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D+ +V I + + M+ +V +L+ SGGKR+RP L + + + +
Sbjct: 19 IADDLRQVETAIEAALSTQETMLEEVSTHLLRSGGKRIRPALVILASRFPGVELKQVIDV 78
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E IH ATL+HDDVVD++ LRRG+ +W NQ SVL GD+L ++AF ++ +T +
Sbjct: 79 AVAVELIHMATLVHDDVVDNADLRRGRPTVNALWNNQVSVLTGDYLFAKAFTLLADTGNN 138
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ +S V +++GEL Q++ +++ TEEDY I KT L + A + +++AGV
Sbjct: 139 RVVRLMSEVVREMSQGELAQMASYFDVEQTEEDYYRRIARKTGYLIAEACRLGAVMAGVG 198
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
QA+ YGM +G++FQ+ DD+LD+ G+ +GK + D + G TLPVI
Sbjct: 199 EEQVQAVYDYGMGVGLSFQIADDLLDFFGDEETVGKPVCGDLKIGILTLPVIHG--LAHA 256
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + I I + + I+ E+ + +A + +KA +L +P + +
Sbjct: 257 PRRAELRELILSRSIDDTAVARVKEILTESGSFDYARGKAREHIEKAVRALDHVPTLATR 316
Query: 308 KSLMEVVDFCLQRL 321
+L + +F + R
Sbjct: 317 PALKTLAEFVINRK 330
>gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
Length = 320
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 107/321 (33%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
MK+L ++++ + K + S+VE I + Y++ SGGKRLRP+L L + +L
Sbjct: 1 MKILSREV---LKEIEERLSKYMDSEVEFILKIGNYILDSGGKRLRPVLVLTFSKLLKGE 57
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +A A+E++HTA+LLHDDVVD + RRGK AA V+GN T+VL GD++ + A
Sbjct: 58 NEERDYPIAVAMEYLHTASLLHDDVVDGAETRRGKAAANRVFGNDTTVLTGDYMYANALY 117
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + +S ++EG+L +L ++D+ EEDY +++ KTAVLF + V
Sbjct: 118 LFSVYGDIDMIRNVSDAVKKMSEGQLLELKKIGDIDMREEDYFRILEGKTAVLFGSCCYV 177
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + G + +++ +YG+++GIAFQL+DD+LDY + ++GK + D R GK T P++
Sbjct: 178 GTALGGGSDKQKKSAYNYGLSIGIAFQLIDDLLDYIADEKKLGKPVCNDLREGKITYPLL 237
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ ++ EK F K I D +++++ +++E T +A Y A L
Sbjct: 238 SVLDKLSEDEKEFVKGVIRDLNPDKKHIERVKNMVKEKGGFDKTIEKAREYVDTAVRELE 297
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
PDS + K L E+ + ++R
Sbjct: 298 NFPDSEYLKELEELAKYIVER 318
>gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 337
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RG 61
L+D + + V I ++ SDV+++ + +Y I +GGKRLR +LTL +A + Y +G
Sbjct: 17 QLKDSVDEKLVLVEEKIKSKLLSDVDLVQKMTEYHIDTGGKRLRALLTLGSAKLCGYTKG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA +E IH ATL+HDDV+D +RRGK +WGN +SVL+GD+LLS+ F M+
Sbjct: 77 GRDINLAACVEMIHGATLMHDDVIDLGNIRRGKKTLNSIWGNHSSVLIGDYLLSRCFEMM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + E L+ LS + +A+GE+ QL +D+ EE Y +I +KTA LFSAA +V +
Sbjct: 137 VDDGNIEVLKLLSSTSSKIAQGEVLQLQHKGEVDMLEETYFKIITAKTAELFSAATKVGA 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ + ++AL+ YG NLG+ FQ+ DD LDY ++ GK IG+DF GK TLPVIL
Sbjct: 197 ILSNKETKEKEALEFYGKNLGLTFQIADDTLDYNSDLKFFGKKIGKDFLEGKITLPVILL 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
FQ + EK+ K+ S E+L ++++ + + +A + A +SL
Sbjct: 257 FQNVSSIEKDKLKNIFKQETRSNEDLNLTLELIKKYNIINECYKKAEHFINLASNSLTVF 316
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
DS KK L + F LQR
Sbjct: 317 KDSDEKKILESLTSFSLQRT 336
>gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
Length = 325
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 166/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +M+ + + S+V ++ V ++++ + GK++RPM A ++
Sbjct: 5 VDEIKVPINDEMKLFEQKFYESMQSNVPLLDKVTRFIVTTKGKQMRPMFVFLCAKLVGSV 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A IE IHTATL+HDDVVD+S RR + +W N+ +VLVGD+LLS+A +
Sbjct: 65 TDKTFRGASMIELIHTATLVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKAVLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K + L +S +AEGEL QL ++ LD+TEE Y +I+ KTA L +A E+
Sbjct: 125 STDHKDYDLLAVISRTIREMAEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + +G G+AFQ+ DD+ D N +GK +G D + K TLP+I
Sbjct: 185 VRSNSDDEVLAAKMMEFGTLTGMAFQIKDDLFD-YLTSNFIGKPVGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++++ ++ + I + +K+ ++ + L Y +AK L
Sbjct: 244 TLKNAAEKDRKYFLNIIRRHNTDTKRVKELIAFVKSSGGLDYAIGVMKDYQHRAKLILDE 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PDS K+SL ++D+ ++R
Sbjct: 304 FPDSEAKRSLHLMLDYVIERK 324
>gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
8271]
gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
8271]
Length = 322
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L D+ KV + K + D ++ YL+ +GGKR+RP TL + Y
Sbjct: 4 KRLFSEIKADLTKVEKELDKLLAVDDPILSKTCVYLLQAGGKRMRPGFTLLSGRFFNYDF 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A AIE IH ATL+HDDVVD S RRG+ WGN SV GDFL ++A M+
Sbjct: 64 KKILPVAMAIELIHMATLVHDDVVDASLTRRGRPTLAAGWGNTVSVATGDFLFAKALEMI 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L+ V+ + +GE++Q+ + ++ + Y + I+ KTA+L + + +
Sbjct: 124 GKIDDPGVAKILADVSVEMCQGEIQQIWSAFDVKQNFKQYYYRIRRKTALLIGLSCRLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ L++YG LGIAFQ++DD+LD + +EMGK +G D R G TLP+I A
Sbjct: 184 MVSDGSLRHMWLLETYGHCLGIAFQIIDDILDIIADPDEMGKPVGGDIRQGIMTLPMIYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q RE+ + + K +++ +++ + + + Y KA L L
Sbjct: 244 LQSSGHRERLGQLLALKNKK--EAQVQEVIHMIKNSDGIERSRTVVDKYINKALKHLEEL 301
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P KK+L E+ F +R
Sbjct: 302 PKIPAKKALRELAVFVGERS 321
>gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
Length = 322
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DM+ V+ I R+ S V +I + Y+I SGGKRLRP+L +A
Sbjct: 3 INAIRELAADDMQAVDQCIRDRLSSPVVLINQLGHYIIHSGGKRLRPLLATLSARACAVE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD V+LA +EFIHTATLLHDDVVD S +RRG A ++GN+ +VLVGDFL S+AF M
Sbjct: 63 GDEPVVLAAVVEFIHTATLLHDDVVDASEMRRGNETANHIFGNEAAVLVGDFLYSRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S +E L+ +AEGE+ QL + DV E Y++VI+SKTA LF AA ++
Sbjct: 123 MVEVGSMRVMEILAHATNVIAEGEVMQLMNCHDADVDEARYMNVIQSKTAKLFEAACQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + ++L YGM+LG AFQL+DDVLDY + GK +G+D GKPTLP+I
Sbjct: 183 AILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKRMGDDLAEGKPTLPLIQ 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT ++ + I DG E ++ I+ AL RA + + A ++
Sbjct: 243 AIRVGTPEQQTVVRQAIEDGGR--EQVEAVLEIVHATGALDYARERAAAETEAAIAAVSV 300
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP+S +++L+++ F + R +
Sbjct: 301 LPESPHRQALIDLARFAVGRDH 322
>gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
Length = 336
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 149/319 (46%), Positives = 202/319 (63%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ LT + + V+ LI+ + SDV +I + Y++ SGGKRLRPML L A L
Sbjct: 18 DSIKKLTTAEAKAVDQLIINELSSDVVLINQMGHYIVGSGGKRLRPMLLLLAAKALGGAN 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DNH+L+A IEFIHTATLLHDDVVDDS LRRGK +A VWGN S+LVGD+L S AF M+
Sbjct: 78 DNHLLMAAVIEFIHTATLLHDDVVDDSDLRRGKESANAVWGNAASILVGDYLYSSAFEMM 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ T + +E LS +AEGE+ QL N + TE+ YL VI KTA+LFSAA ++++
Sbjct: 138 VRTGNMRVMEILSKTTTAIAEGEVLQLLNCNNPETTEQKYLEVIARKTAILFSAATKLAA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IAG Q L YG +LGIAFQL+DD LDY+ +E+GKN+G+D GKPTLP+I A
Sbjct: 198 VIAGASTETEQGLSLYGQHLGIAFQLIDDALDYKASKDELGKNLGDDLAEGKPTLPLIYA 257
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q G++ E I +G V + + I++ +A+ TE RA QKA +L L
Sbjct: 258 IQNGSESEAKIIIDAIKNGDRDV--FNEVYAIVQSTKAIDYTEQRADEEAQKAISALSVL 315
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS +K++L + F +QR
Sbjct: 316 PDSEYKQALTLLAMFSVQR 334
>gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 323
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM +V+ I ++ SDV +I + Y++ SGGKRLRPML + A L Y G
Sbjct: 4 KAIQALTANDMAQVDAKIQAQLNSDVALINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 64 EKHTTAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+S + L+ +S +AEGE+ QL + D TE+ Y+ VI SKTA LF A+ ++++
Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPDTTEDSYMQVIYSKTARLFEASTQIAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + I +E L M E+ +L T+ RA +KA +L +
Sbjct: 244 MHHGNAEQTAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQKRAEEEAEKAIAALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQR 320
DS +K++L+ + +QR
Sbjct: 303 ADSDYKEALIALAHMAVQR 321
>gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus
PHEA-2]
Length = 325
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MANAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R T E + +I G + L + I++++ AL RA + A +L
Sbjct: 246 ALARSTGEEHAIIRRSIATGGVD--QLSQVIEIVQKSGALDYCNQRAQEETEAALQALSN 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L R+
Sbjct: 304 LPDTPYRQALINLTQLALHRI 324
>gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus
iheyensis HTE831]
gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Oceanobacillus iheyensis HTE831]
Length = 323
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 168/322 (52%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + KDME + + I ++ ++ D L+ +GGKR+RP+ L ++ + Y
Sbjct: 3 LPKIYGFLKKDMESIESALQDSIQANHPVLRDASTELLHAGGKRIRPVFVLLSSQLGNYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A +E IH ATL+HDDV+D++ LRRGK ++GN+ ++ GD++L++A
Sbjct: 63 LSKIKKVAVTLELIHMATLVHDDVIDEAELRRGKPTTASIYGNRVAMYTGDYILARALEE 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + LS ++ GE+ Q+ N + DYL IK KTA+L +++ ++
Sbjct: 123 ITEIPDPRVHQLLSKTLVEVSIGEIEQIEYKFNWEQNFRDYLRRIKRKTALLIASSCKLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G+ + L YG +G+++Q++DD+LD+ E+GK G D G TLPV+
Sbjct: 183 AIVGGLNDYQTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGKPAGNDLLQGNITLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +++ + DG ++ +K ++ A+ + + Y KA +L
Sbjct: 243 AMED-KTFKQSLFNVFSKDGHVTTNEMKTLIQHLKRTDAIKRSYAVSDMYLSKALTALDE 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P S KK+L ++ + +R +
Sbjct: 302 IPASRAKKTLQDIATYIGKRRS 323
>gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
Length = 325
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 114/321 (35%), Positives = 182/321 (56%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YR 60
+ + +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVAQDFATMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAED 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF +
Sbjct: 67 LERQRKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L+ S C +AEGE+ QL + TE+ YL +I KT+ LF A E +
Sbjct: 127 LVDLGDMTLLKDFSTGTCEIAEGEVLQLQAQHQPETTEQTYLDIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-SGTPQYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E + + +I G +L + I+ + AL RA+ + A +L+
Sbjct: 246 ALKNTTGEEHDIVRRSIATGGT--ADLDQVIAIVNSSGALDYCRQRAHEETEAALQALQA 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS ++++L+ + L R+
Sbjct: 304 LPDSQYRQALVNLTQLALHRI 324
>gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
Length = 324
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 168/321 (52%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +++M+ K + + V ++ ++KY+I GK++RPM TA L
Sbjct: 5 IDSIQAPIVEEMKSFEKKFRKSMKTHVMLLDQIMKYIIHRKGKQIRPMFVFLTAGALGGI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A IE +HTATL+HDDVVD++ RRG + +W N+ +VLVGD+LL++ +
Sbjct: 65 KESTYRGAALIELLHTATLVHDDVVDEANYRRGFFSVNALWKNKIAVLVGDYLLAKGLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E + L+ +S ++EGEL Q+ ++ LD+TEE Y VI+ KTA L +A V
Sbjct: 125 SVENEDFNLLKIVSTAVREMSEGELLQIEKARKLDITEEVYYEVIRQKTATLIAACCAVG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A + + G +G+AFQ+ DD+ D+ + +GK G D + K TLP+I
Sbjct: 185 AASADRTPEEVEKARLLGEKIGMAFQIKDDLFDFGTDE--IGKPTGIDIKEKKMTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + K + I + E + + ++++ L Y +A + ++
Sbjct: 243 ALNQSSWGTKRHIINLIKNHSSKPEKVNEVIDFVKQSGGLEYATKVMQGYVDEAFELMKH 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S +K SL +V F ++R
Sbjct: 303 FPESPYKTSLQGLVQFTIERK 323
>gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 321
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 107/322 (33%), Positives = 173/322 (53%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L D D++ V + + + ++ + +L+ +GGKRLRP L L A Y
Sbjct: 1 MLELFDEIKGDLQVVEEELRAVVQTQNPLLTETSTHLLNAGGKRLRPALCLFGAKFYNYN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FC 119
+ + LA A+E IH ATL+HDDVVD S RRG + WGN S VG +L +++
Sbjct: 61 LEKVLPLAVALELIHMATLVHDDVVDASMTRRGIPTVKAKWGNSISTHVGTYLFAKSLIL 120
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ K+ LS ++ + EGE++Q+S S N+ + ++YLH IK KTA+L +A++++
Sbjct: 121 LSKYEKTPIIARVLSSISVKMCEGEIQQISSSFNICQSIKEYLHRIKLKTALLIAASIQL 180
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ G S+ L+ YG N+G+AFQ+ DD+LD E +++GK +G D R G T+PVI
Sbjct: 181 GAAACGAPVSIHLPLRRYGHNIGMAFQITDDILDMVAEESQLGKPVGSDLRQGIVTIPVI 240
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A +++ I + + E +++A I++ A+ + A Y KAK+ L+
Sbjct: 241 YALTCC--QQRKRLVELIGKVEKTEEEIREAIKIIKSCGAIEYSFNLARKYLLKAKEELK 298
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPD + +L DF R
Sbjct: 299 SLPDIPTRFTLSLAADFIGVRK 320
>gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum]
Length = 320
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ +V + + +D + +L+++GGKRLRP L Y +
Sbjct: 4 QLFREIQADLARVEKELSNYMDTDHPTLTAASGHLLYAGGKRLRPAFVLLAGRFHNYSFE 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +E IH ATL+HDDV+D+S RRG R WGN+ S+ GD L +++ ++
Sbjct: 64 RLLPLAVTMEMIHMATLVHDDVIDESETRRGTPTVRARWGNRVSMHAGDHLFARSLLLIA 123
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + L+ + + EGE++Q++ + +++ DYL+ IK KTA+L SA+ ++ ++
Sbjct: 124 EMNNPIIARVLAETSVEMCEGEIQQMATAFDVEQNFRDYLYRIKRKTALLLSASCQLGAV 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +ALK YG +LG+AFQ+ DD+LD + ++GK IG D R G TLPV+ A
Sbjct: 184 AVDAPPYMIRALKWYGYHLGMAFQVTDDILDLEADEAKLGKPIGSDLRQGIMTLPVLEAI 243
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ K+ + + S +++A I+++ A+ + A Y KAK L LP
Sbjct: 244 AQVQDP---KLKTLLAKQEKSEREVQEAIRIIKQTDAIARSHRVAQLYLAKAKAELSRLP 300
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ + S+ + DF +R
Sbjct: 301 NIPARDSMAMIADFIGRRS 319
>gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
91-118]
gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
91-118]
Length = 332
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMTAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G + + + L + RA Y A+ +L
Sbjct: 253 AMAHSDATTRERLRQIVEQG--DAAAMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + ++R +
Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332
>gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 337
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 6/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
++L L + + +V ++ + S+V I + ++L+ +GGKR RPM TL A R
Sbjct: 21 ELLRTLVV-GLNEVEEILREVARSEVSAIEEAARHLVDAGGKRFRPMFTLLAAQFGTGGR 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A A+E +H ATL HDDV+D++ +RRG + W N ++L GD+L + A +
Sbjct: 80 RDDVITAAAAVELVHLATLYHDDVMDEATMRRGAPSVNARWDNSVAILTGDYLFAHASRL 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +A ++ L G++R+ D E YL VI KT L + A
Sbjct: 140 VA-DLGTDAARIIAETFGELVTGQMRETVGPGADDDHVEHYLSVIAQKTGSLIATAGRFG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +G +AL+ +G +G AFQ+ DD++D GK G D R G TLP+
Sbjct: 199 GMFSGASPEHVEALRRFGDIIGTAFQISDDIIDITSPSTTSGKVQGTDLREGVRTLPMYY 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ +++A ++R + L T Y ++A++ L
Sbjct: 259 ALAHDPDPRLVE---LLSGPLTDDALVEEALELLRRSGGLERTRATLADYARRAREELAV 315
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S + + V D+ + R +
Sbjct: 316 LPASPARDACESVADYLVARTH 337
>gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
Length = 325
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYR 60
++D K+ME + S V ++ + Y++ GK++RPM TA +
Sbjct: 6 QIKDPVNKEMELFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+ +
Sbjct: 66 NERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A +
Sbjct: 126 SIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCSLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + + +G +G+AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 186 ACSVNPDSDDVETFRKFGELIGMAFQIKDDLFDY--GDEAIGKPTGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
TK+EK++ +++ + +K+ ++++ L E + S+ ++A L
Sbjct: 244 TLNNCTKKEKSWLINSVKKHNKDKKRVKEVINFVKDSGGLAYAEEKMMSFKKEALALLSK 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S +K SL +V++ + R
Sbjct: 304 YPESDYKSSLELMVNYVVDRK 324
>gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 332
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 11 ERLAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLFGYG 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 71 GDHHIRLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV
Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAATDLRTDEAVYLQVVRGKTAALFSAATEVG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 191 GVIAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E+ FW+ TI G+ +L+ A +MR+ R L T A + KAK +L
Sbjct: 251 AVAQATPEERAFWERTIEKGRQQEGDLEHALGLMRKYRTLEATRADALGWAAKAKAALAV 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L ++ D+ + RLN
Sbjct: 311 LPDHEIRDLLRDMADYVVARLN 332
>gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
Length = 325
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 185/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A +
Sbjct: 7 QDILAPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACDLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MQNAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G + L K I++++ AL + RA + A +L
Sbjct: 246 ALAHSTGEEHAIIRRSIATGGVD--QLPKVIEIVQKSGALDYCQRRAQEETEAALQALSI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L R+
Sbjct: 304 LPDTPYRQALINLTRLALHRI 324
>gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 309
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 121/310 (39%), Positives = 176/310 (56%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + G +H LA I
Sbjct: 1 MAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPTGPHHHQLAAII 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F ++ E + E ++
Sbjct: 61 EFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQLMTELANLEVMQ 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ +L + +
Sbjct: 121 ILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQ 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI A
Sbjct: 181 TRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIHAMTHSDAATCE 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I+ G + + +R +L + RA +Y A+ +L LP++ +L
Sbjct: 241 RLRMIISKGDSDA--MPEVLNAIRTTGSLDYSRQRASAYAATAERALDGLPETEAVAALR 298
Query: 312 EVVDFCLQRL 321
+ + +QR
Sbjct: 299 GLARYAVQRT 308
>gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
Length = 324
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 169/321 (52%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ +M + + S V+++ ++ Y++ GK++RPM TA +
Sbjct: 5 LKQIQVPIASEMTEFELKFRGLMKSKVKLLDHIMNYIVKRKGKQMRPMFVFLTAGVCGEI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A IE +HTATL+HDDVVDD+ RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 65 NESTHRGAALIELLHTATLVHDDVVDDANYRRGFFSVNALWKNKIAVLVGDYLLSRGLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + L+ +S ++EGEL Q++ ++ LD+TEE Y +I+ KTA L ++ V
Sbjct: 125 SVDNGDFKLLQIVSNAVKEMSEGELLQIAKARKLDITEEVYYQIIRQKTASLIASCCAVG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ V ++ +G +G+AFQ+ DD+ D E+GK +G D + K TLP+I
Sbjct: 185 ASSVEGNIEVVSKMQEFGEKVGMAFQIKDDLFD--YGEEEIGKPVGIDIKEKKMTLPLIF 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A EK S I + + + + ++++ L + + + Q+A L
Sbjct: 243 ALNNTDWLEKRRIISLIRNKSDDKKAVNQVITFVKKSGGLEYAKEKMNMFFQEALAILNQ 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PDS +K SL ++V + ++R
Sbjct: 303 FPDSQYKTSLEDLVSYTIERK 323
>gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
Length = 326
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 110/320 (34%), Positives = 189/320 (59%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+
Sbjct: 8 VQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQ 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF +
Sbjct: 68 GKEHIFLATMIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAAAILTGDFMYSRAFQL 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ T++ E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++
Sbjct: 128 MVRTQNLRICEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMA 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG V + Y + LG AFQ++DDVLDY G + +GKN+G D R GK T+P+I
Sbjct: 188 SVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTGTKDNIGKNLGTDLREGKMTMPLIY 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + ++ ++ +E++ + + + A+ A + D+L C
Sbjct: 248 ALRHCSEEDAKIIRTAVSSNDPDLESVTRV---ILASGAIDACIEAAKKEVSRGIDALNC 304
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S++K SL+E++ ++R
Sbjct: 305 LPTSAFKNSLIELLSLTVER 324
>gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
Length = 323
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 107/320 (33%), Positives = 178/320 (55%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + + + K + SDVEM+ +V Y+ SGGKRLRP+ ++ + Y
Sbjct: 3 ISDITALVKDKLALLEEELKKNLDSDVEMVNEVAYYVFESGGKRLRPIFMFLSSGLGGYT 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ V+L+ +E+IHTATLLHDDV+D + RRG+ +A +GN +VL GDFL S+AF
Sbjct: 63 GNRDVILSGVVEYIHTATLLHDDVIDGAKFRRGRPSANQAFGNDITVLCGDFLYSRAFVN 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ A T++EGE+ QL + N +++ E+Y +I SKTAVLFSA E+
Sbjct: 123 LVKDGDPKVQMILANAAKTMSEGEVFQLVKTANFNLSFEEYNKIIFSKTAVLFSACCEIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + + +G +G++FQ+ DD+LDY G+ + GK G D + GK TLP++L
Sbjct: 183 AMLAGFDGERVKMMAEFGKIVGLSFQMSDDILDYLGDPAKTGKKPGTDLKEGKMTLPMLL 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E K I ++ +M E SY + A+D L
Sbjct: 243 LRDLANESELMKMKDIIAS-DPDENDITYIIDLMERYDVKSKAESFVDSYTKSARDLLSS 301
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PD+ ++++L + ++ + R
Sbjct: 302 FPDNEYRRALEFLSEYVILR 321
>gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum MolK2]
gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum MolK2]
Length = 352
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 134/319 (42%), Positives = 197/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++
Sbjct: 36 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNH 95
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 96 HYELAAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQ 155
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 156 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 215
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 216 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLS 275
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A +++ LP
Sbjct: 276 HGTEEQRALARQAIEQGGT--EHFDAIFDAIQASGALEYTRKAAEREASAAAEAIIALPP 333
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+E+ F LQR +
Sbjct: 334 SQFRQTLIELCAFSLQRQS 352
>gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus
selenitireducens MLS10]
gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus
selenitireducens MLS10]
Length = 323
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +D+ K+ + I + ++ +L+ +GGKR+RP+ L +A +Y+
Sbjct: 3 LSEIYLYLKQDISKIEKELEMSIEARHPVLVKASSHLLKAGGKRIRPVFVLLSAQFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH +L+HDDV+DD+ LRRGK + W N+ ++ GD++ ++A +
Sbjct: 63 LDKVKHVAVPLEMIHMGSLVHDDVIDDAELRRGKKTIKAEWDNRVAMYTGDYMFAKAIEI 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + E LS ++ GE+ Q+ N D YL IK KTA+L S + E+
Sbjct: 123 ASKSGNMKLHEILSDAMVEMSIGEVEQIKEQFNPDQHLRIYLRRIKRKTALLISVSCELG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+LIAG + + LK YG G+AFQ+ DD+LD+ G E+GK G D G TLP +
Sbjct: 183 ALIAGADETTQMKLKRYGYFTGMAFQITDDILDFVGTEKELGKPAGSDLMQGNITLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ ++ G V ++ +++ A+ ++ A Y K L+
Sbjct: 243 AMRQDESLRRDLVSFMQTKGTGDV-DMPGIIQRIKDTGAISYSKEMADRYLDKGMRELKG 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K++L E+ ++ +R
Sbjct: 302 LPDIRAKRALREIAEYIGRRK 322
>gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803]
gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803]
Length = 323
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L G+
Sbjct: 6 ELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALSPEGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEAGTRRGVETVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA+GE++Q + T E YL KTA L + +
Sbjct: 126 HLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTGQTFETYLEKSYCKTASLVANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G ++L YG LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTGSEQQLGKPAASDLSSGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A ++ I + +L +A I+R++ A+ T A + Q+++++L
Sbjct: 246 YALEQNPSLGV-----LIEREFSNEGDLDEALQIVRQSDAIARTRQLAERFAQESREALS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S + +L+E+ DF L RL
Sbjct: 301 WLPESPSRTALLELPDFVLSRL 322
>gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus
cellulosilyticus DSM 2522]
gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus
cellulosilyticus DSM 2522]
Length = 323
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 87/321 (27%), Positives = 164/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+ K+ I I ++ ++ + +L+ +GGKR+RP+ L +A EY
Sbjct: 3 LTDIYWDYKPDINKIEKEIELNIDANHPILQEASSHLLKAGGKRIRPVFVLLSAQFGEYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A+E IH A+L+HDDVVDD+ LRRGK + W N+ ++ GD++ ++A +
Sbjct: 63 IEEIKNIGVALEMIHMASLVHDDVVDDADLRRGKKTIKSKWDNRVAMYTGDYIFAKAVEI 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + LS + GE+ Q+ + + Y IK KTA+L + + ++
Sbjct: 123 ATYYDTPDIHKILSHALVEMCIGEVEQIRDQYDWNQNLRMYFRRIKRKTALLIAISCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G + +AL +G N+G+AFQ+ DD+LD+ G E+GK G D G TLP +
Sbjct: 183 AIASGAPEAHVRALSRFGYNVGMAFQITDDILDFVGTEKELGKPAGSDLLQGNITLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R + + + + + + ++++ A+ ++ A Y K+ ++L
Sbjct: 243 AMCRCDDVKGRIIHHLDEN-VMDKKEMGETISLIKDTGAIDFSKNIADRYLMKSIEALNQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS K +L ++ ++ R
Sbjct: 302 LPDSKAKTALQKIANYIGDRK 322
>gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
Length = 325
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRG 61
+ + K+ME + + S V ++ + Y++ GK++RPM TA +L
Sbjct: 7 IREPIDKEMELFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLNEGQVN 66
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGDFLL++ +
Sbjct: 67 ERTYRGASVIELIHTASLVHDDVVDESFKRRGFFSINALWKNKIAVLVGDFLLARGMLLS 126
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + L +S ++EGEL QL ++ LD+TEE Y +I+ KTA L +A + +
Sbjct: 127 VDNGDFDLLRIISAAMREISEGELLQLEKARRLDITEEVYYEIIRQKTATLIAACCSLGA 186
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + + +G G+AFQ+ DD+ DY N +GK G D + K TLP+I A
Sbjct: 187 ASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDY--GENRIGKPTGIDIKEQKMTLPLIYA 244
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++R++ + +++ + + +++ ++ + L E R + Q+A + L+
Sbjct: 245 LNSASERDRKWLINSVKNYNTDKKRVREVIDFVKSSGGLEYAEGRMQEFKQEALEMLKPF 304
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P SS++++L +V++ + R
Sbjct: 305 PQSSYREALELMVNYVVDR 323
>gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
Length = 322
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ +DM+KV+ +I K + SDV +I V Y+I SGGKRLRP L L +A
Sbjct: 3 LAFIQSCIAEDMQKVDAVIRKALHSDVVLINQVADYIINSGGKRLRPTLVLLSAGAFGRI 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA IE IHT+TLLHDDVVD+S+LRRGK A ++GN SVLVGDF+ S+ F M
Sbjct: 63 EAKHHELAAIIELIHTSTLLHDDVVDESSLRRGKATANTLFGNAASVLVGDFIYSRTFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ +S +E LS T+AEGE+ QL + D+T+E YL VI KTA LF AA +
Sbjct: 123 MVGIQSMRVMEVLSDATNTIAEGEVLQLLNVHDADITDEAYLRVIHYKTAKLFEAATRLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G A+ YGM LG AFQLVDDVLD G+ +E+GKN+G+D GKPTLP++
Sbjct: 183 AIICGTDAQDEAAMAEYGMRLGTAFQLVDDVLDLSGDSSEIGKNLGDDLAEGKPTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + GT+ + +++I G + + L ++ AL A + ++
Sbjct: 243 AMRHGTEAQHEIIRNSIEKGGL--QELPAVVEAVKATGALEHVRELAKAEAAAGCAAIMH 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S++K++L+ + DF + R
Sbjct: 301 LPESTYKEALLRLADFAVSR 320
>gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000]
gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthase) protein [Ralstonia solanacearum GMI1000]
Length = 322
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 134/319 (42%), Positives = 196/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +
Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQH 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 66 HYELAAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQ 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 126 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 186 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLS 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A +++ LP
Sbjct: 246 HGTETQRALARQAIEQGGT--EHFDAIFAAIQASGALEYTRKAAEHEASAAAEAIIALPP 303
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+E+ F LQR +
Sbjct: 304 SQFRQTLIELCAFSLQRQS 322
>gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15]
Length = 322
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +
Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQH 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++
Sbjct: 66 HYELAAVVEFIHTATLLHDDVVDESELRRGRQTANAAFGNAASVLVGDFLYSRAFQMMVQ 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 126 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 186 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLS 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A +++ LP
Sbjct: 246 HGTETQRALARQAIEQGGT--EHFDAIFAAIQASGALEYTRKAAEREASAAAEAIIALPP 303
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+E+ F LQR +
Sbjct: 304 SQFRQTLIELCAFSLQRQS 322
>gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
Length = 325
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60
++ K+ME + + S V ++ + Y++ GK++RPM A M
Sbjct: 6 KIKLPIEKEMELFEKKFRESMTSQVSLLNRITHYIVNRKGKQMRPMFVFLIAKMCDEGNV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 NERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A +
Sbjct: 126 SIDHGDFDLLKIISVAVREMSEGELLQIEKARRLDITEEIYFEIIRQKTATLIAACCAMG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + ++++G +G AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 186 AKSVNASEGQVENMRAFGELIGTAFQIKDDLFDY--GDTAIGKPTGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+++EK + +++ + + + +K+ ++EN L E SY QKA L
Sbjct: 244 VLNNVSEKEKRWLINSVKNHNTNKKRVKEVITFVKENGGLDYAEQIMRSYQQKALLLLSD 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S +K SLM +V++ + R
Sbjct: 304 FPESPYKDSLMMMVNYVIDRK 324
>gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
Length = 324
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 164/320 (51%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + DM ++ + + I E++ + +L+ +GGKRLRP+ L +Y
Sbjct: 3 LLDIFAKLKGDMSRIEQELERSISFGDELLSETSLHLLKAGGKRLRPVFVLLAGKFGQYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH ++L+HDDV+DD++ RRG++ + W N+ ++ GD++ +A +
Sbjct: 63 LDKLTKVAVPLELIHMSSLVHDDVIDDASTRRGQLTVKSKWDNRIAMYTGDYIFGRALTI 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E + LS ++ GE+ Q+ N + T DYL I+ KTA+L + + ++
Sbjct: 123 VTELDDPFIHQMLSKSLVQMSIGEMEQIRYFFNTEQTIRDYLLRIRRKTALLIAISCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + L YG N+G+ FQ+ DD+LD G ++GK G D R G TLPVIL
Sbjct: 183 AAAAGADRATLNRLYRYGYNVGMTFQIRDDMLDLFGTEKQIGKPPGSDIRQGNITLPVIL 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + RE + I + K A +++ ++ + + A Y +KA +L
Sbjct: 243 ALKDDKVREPLLEQIRIIREHNGNVDTKPAISLIKSSKGIQLADQLANDYIKKALAALEG 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP KK+L+++ F +R
Sbjct: 303 LPSIGAKKNLIDIAHFVGKR 322
>gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
hydrogenoformans Z-2901]
Length = 326
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 108/319 (33%), Positives = 183/319 (57%), Gaps = 3/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L +L +D+ K+ ++K + E + D +L+ +GGKRLRP L A + +Y
Sbjct: 9 KKLFELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLAAKLGDYDF 68
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA A+E IH ATL+HDDVVD+S LRRG + WGN+ S+ +GD + +++ ++
Sbjct: 69 EKVKPLAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLI 128
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
K+ + L+ V+ + GE++QL+ +KN+ + +DYL IK KTA+L SA+ E+
Sbjct: 129 DSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGG 188
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A V V ALK YG+ +G+AFQ++DD+LD+ + +GK +G D R G TLPV+LA
Sbjct: 189 VMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLA 248
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R K + + + + N+++ ++ + + A +Y +KA + +
Sbjct: 249 LKRDKK---HELWRELQNLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELV 305
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S K + +E+ F +QR
Sbjct: 306 PKSPVKDTFLEIAQFIVQR 324
>gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
Length = 325
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60
++ + +ME + S V ++ + Y++ GK++RPM + M+
Sbjct: 6 QIKQPIITEMELFEKKFSNSMTSKVALLNRITHYIVNRKGKQMRPMFVFLVSKMVSDGLV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 NDRTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A +
Sbjct: 126 SIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCAMG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + L+ +G +G+AFQ+ DD+ DY ++GK G D + K TLP+I
Sbjct: 186 AKSVNASDEEVENLRLFGEYIGMAFQIKDDLFDY--GDTQIGKPTGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A TK+EK + ++I + + +K+ +++ L + SY +KA L
Sbjct: 244 ALNHCTKQEKKWVINSIKNHNKDKKRVKEVIAFVKKTGGLEYAITQMKSYQEKALKLLEI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S++K SL +V++ + R
Sbjct: 304 YPQSTYKDSLELMVNYVIDRK 324
>gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus]
Length = 325
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 113/321 (35%), Positives = 187/321 (58%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 LKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TE+ YL +I KT+ LF A E +
Sbjct: 127 LVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGKPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIA 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q +++ + +I G S L++ I++ + AL RA ++A +L
Sbjct: 246 AMQNTQGEQRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S+++++L+ + L R+
Sbjct: 304 LPESTYRQALVNLTRLALDRI 324
>gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
Length = 324
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 125/317 (39%), Positives = 194/317 (61%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +VN +I + + SDV +I + Y+I SGGKRLRP+LT+ + L Y D
Sbjct: 8 FQQNLEADLSRVNVVINRAVQSDVALISQIGTYIIGSGGKRLRPILTILSGKCLGYDDDK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N+D+TE+ YL VI+ KTA LF AA +V +++
Sbjct: 128 SGSLKILEVMADATNIIAEGEVMQLMNIGNVDITEQQYLQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + +ALK +GM +G AFQ+VDDVLDY G V ++GKN+G+D GKPTLP+I Q
Sbjct: 188 AGADDEQERALKEFGMYMGTAFQIVDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQ 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G++ + ++ + + K + E+ L +A +A L+ LPD
Sbjct: 248 QGSQAARQDVRTALQNADR--AYFDKIHQYVTESDVLEYCMTQAKEAVNQAIHCLKRLPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+ +++ ++ + + R
Sbjct: 306 NEVTQAMRQMAELSVVR 322
>gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
Length = 325
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 173/323 (53%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ +ME + S V ++ + Y++ GK++RPM A ML
Sbjct: 4 VEQIKQPIAHEMELFEQKFSLSMKSKVPLLNRITHYIVNRKGKQMRPMFVFLVAKMLGDE 63
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+
Sbjct: 64 RLNDRTYRGASVIELIHTATLVHDDVVDDSYRRRGFFSLNALWKNKIAVLVGDFLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + + L+ +S+ ++EGEL Q+ +++LD+TEE Y +I+ KTA L +A
Sbjct: 124 LLSIDNEDFDLLQIISVAVREMSEGELLQIEKARDLDITEEVYFEIIRQKTATLIAACCA 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + +A++ +G +G+AFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 MGACAIHASKKDVEAMRKFGELIGLAFQIKDDLFDY--GSQKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A +++ + +++ + + + + ++E+ L + + Q+A L
Sbjct: 242 IYAVNNSDDKQRKWLINSVKNHNKDKKRVNEVIAYVKESGGLDYAVAKMKALQQEALKIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P+S +K++L+ +V++ ++R
Sbjct: 302 DKYPESKYKEALVLMVNYVIERK 324
>gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152]
gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152]
Length = 325
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 174/323 (53%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+++++ K+ME + S V ++ + Y++ GK++RPM A M+
Sbjct: 4 VELIKLPIKKEMELFEKKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A +E IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+
Sbjct: 64 GFDERTYRGASVVELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDFLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A
Sbjct: 124 LLSIDNEDFDLLKLISIAVREMSEGELLQIEKARKLDITEDIYFDIIRQKTATLIAACCG 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + G Q ++ +G +GIAFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 IGAASVGANQDTVQQMRKFGEYIGIAFQIKDDLFDY--SDEKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + +EK + +T+ + +K+ ++EN + T + +Y KA L
Sbjct: 242 IHTLNNCSAKEKAWIINTVKKHNKNKVRVKELIAFVKENGGIDYTISQMNAYKSKAIAIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+S +K SL++++D+ ++R
Sbjct: 302 NNYSESPYKASLLQMIDYVVERK 324
>gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
Length = 323
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 168/314 (53%), Gaps = 1/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++M + +L I ++ + + ++ I +GGKR+RP L +A Y + L
Sbjct: 10 ISREMSCLEEELLSSIKTNEPFLSEPLERTIKAGGKRIRPALVYLSARFGNYDYEKIKPL 69
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +HTATL+HDD+VDDS LRRG + G +V GD++L++ F ++++
Sbjct: 70 AVAVELVHTATLIHDDIVDDSPLRRGISTVQAAIGKDAAVYAGDYVLARTFKILVDHGDF 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L+++S V + EGE+RQ + ++ ++ DY I+ KTA+LF+ + E+ + A
Sbjct: 130 DILKSVSSVLYRVCEGEVRQKREAFDITISFLDYARRIRKKTALLFALSCELGARGAKAD 189
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
ALK YG+ LG+AFQ++DD+LD + + GK G D + G TLP++ A
Sbjct: 190 PRTISALKKYGILLGMAFQVMDDILDLTEDESRSGKPRGNDIKEGVITLPLLYALNN-QS 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + +I + I++E+ + + A Y +K+K++L L DS +
Sbjct: 249 TALELRELLSDKHRIDDSTISTIIEIVKESGGIEYARHIAGRYVEKSKENLLVLEDSPAR 308
Query: 308 KSLMEVVDFCLQRL 321
SLM + D+ + R
Sbjct: 309 SSLMLLADYVVDRT 322
>gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
Length = 337
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 137/319 (42%), Positives = 203/319 (63%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ L D+ V L+ R S V +IPD+ Y++ +GGKRLRPM+TL A +
Sbjct: 18 ERMQALVADDLAAVERLLATRAASPVAVIPDLSGYIVSAGGKRLRPMITLIAAHAVGKAN 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA A+EFIHTATLLHDDVVD+S LRRGK AA+ +WGN+ ++LVGDFL ++AF ++
Sbjct: 78 AATHALAAAVEFIHTATLLHDDVVDESDLRRGKPAAKAIWGNKAAILVGDFLFARAFNLL 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E S + L L+ + +AEGE+RQL+ D+ E+YL ++++KT LF AA E +
Sbjct: 138 VEANSLDILNRLATASTVIAEGEVRQLAAMATRDLPTEEYLAIVEAKTGALFEAAAETGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG + AL +YG NLG+AFQ++DD LDY G + +GK++G+DFR GK TLPVI+A
Sbjct: 198 MSAGGEEYSD-ALATYGKNLGLAFQIIDDALDYGGTTSVIGKSVGDDFREGKITLPVIIA 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+RG+ ++ FW +N +L A ++R A T A +Y AK +LR L
Sbjct: 257 RRRGSDEDRAFWDRALNPETQEDSDLAHAVHLIRATGAAEATVQEAEAYAALAKGALRTL 316
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S+++ +L ++ DFC+ R
Sbjct: 317 PASTYRDALEDLADFCVSR 335
>gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. TM1035]
gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. TM1035]
Length = 333
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 147/322 (45%), Positives = 202/322 (62%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y
Sbjct: 12 EQLAAHLAAKMEAVNLLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +
Sbjct: 72 GPFDVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L+ LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV
Sbjct: 132 MVEPGSLRVLDILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI
Sbjct: 192 GVIAGAPETQIKALFEYGDALGIAFQIVDDLLDYQGDAKSTGKNVGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ FWK TI G +L+ A +M+ + AL T A + +A+ ++
Sbjct: 252 AVSAANAEERAFWKRTIEKGDQRDGDLEHALALMQAHGALEQTRAEALDWAARARAAIAV 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L + + + R++
Sbjct: 312 LPDHPVRGMLDRLAGYVVARIS 333
>gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
Length = 325
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 113/321 (35%), Positives = 186/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 LKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TE YL +I KT+ LF A E +
Sbjct: 127 LVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEAVYLQIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGKPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIA 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q +++ + +I G S L++ I++ + AL RA ++A +L
Sbjct: 246 AMQNTQGEQRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S+++++L+ + L R+
Sbjct: 304 LPESTYRQALVNLTRLALDRI 324
>gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
Length = 326
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 167/322 (51%), Gaps = 5/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYR 60
+++ ++ME + S V ++ + Y++ GK++RPM A M
Sbjct: 6 QIKEPIREEMELFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 SERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EV 179
I+ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A
Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMG 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + Q + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I
Sbjct: 186 ACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ EK + +++ + +K+ ++ ++ L + + QKA + L
Sbjct: 244 YVLNTCSEEEKQWLINSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILD 303
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P S +K++L +V++ + R
Sbjct: 304 EFPVSPYKEALTLMVNYVIDRK 325
>gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 323
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 105/324 (32%), Positives = 170/324 (52%), Gaps = 5/324 (1%)
Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ L L D++ V + + + + ++ + +L+ +GGKRLRP L
Sbjct: 1 MRQLLKLFNEIKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFY 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
Y + LA A+E IH A+L+HDDVVD S RRG + WGN+ SV VGD+L +++
Sbjct: 61 NYDIKKLLPLAVALELIHMASLVHDDVVDASMTRRGMPTVKAKWGNRISVHVGDYLFAKS 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ K LS + ++EGE++Q+S S N++ +DY + IK KTA+L SA+
Sbjct: 121 LILISSYKEPLITRVLSDTSVKMSEGEIQQISTSFNVNQYLKDYFYRIKRKTALLISASC 180
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++ G + L YG +G+AFQ+ DD+LD N++GK IG D R G TLP
Sbjct: 181 QLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILDMVANKNKLGKPIGGDLRQGIITLP 240
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VI A ++ K + I S + + +A I++++ + + A Y KA+
Sbjct: 241 VIYALEKS--PRKERLRDLIVKEVKSDKEVYEAIEIIKKSGGIKYSFDIADKYIHKARIH 298
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LPD++ K +L +F R
Sbjct: 299 LAKLPDNTIKSTLNLAAEFIKVRK 322
>gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
Length = 325
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 169/323 (52%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ +++ +++ME + + S V ++ + Y++ GK++RPM T+ ++
Sbjct: 4 VDQIKEPIIEEMELFEKKFYESMTSKVALLNRITHYIVNRKGKQMRPMFVFLTSKLINNG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTATL+HDDVVD+S RRG + +W N+ +VLVGD+LLS+
Sbjct: 64 EVNERTYRGASVIELIHTATLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A
Sbjct: 124 LLSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCS 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + + +G G+AFQ+ DD+ DY +GK G D + K TLP+
Sbjct: 184 LGACSVKPDSEEVEVFRKFGEYCGMAFQIKDDLFDY--GDAAIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I +K+EK + ++I + + +K+ +++N L + + +A L
Sbjct: 242 IYVLNNCSKKEKKWVINSIKNHNKDKKRVKEVINFVKDNGGLEYAVTKMLEFKDQALTIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
PDS +K SL +V++ + R
Sbjct: 302 ETYPDSDYKNSLQLMVNYVVDRK 324
>gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 329
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 103/319 (32%), Positives = 172/319 (53%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K + DL D+ ++ S V++I ++ +YL GGKR+RP+L L +A YRG
Sbjct: 10 KEIFDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREGGGKRIRPLLLLLSARSQSYRG 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
L +E +HTATL+HDD++D + +RRG+ + WGN VL GD+L QAF +
Sbjct: 70 AGATRLGAVVEMVHTATLVHDDIIDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAFRVA 129
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ ++ L+ L + + EGEL QL V ++Y +I KTA LF ++ + +
Sbjct: 130 LDERNFRVLDLLIGLTQQMVEGELMQLETLG-RQVNSQEYYDLIYRKTACLFEVSMRLGA 188
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A ++ + + YG NLG+AFQ+VDDVLD +GK + D R GK T+ VI A
Sbjct: 189 VLAKATDAEEECMGEYGRNLGLAFQIVDDVLDLTATEEVLGKPVASDLREGKATMAVIHA 248
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G E+ + + D + + ++ N ++ A+ Y + A+ +L L
Sbjct: 249 LENGGAEERAAILTVLEDQNFERVSHDQILAALKRNGSVEYAMNTAFEYAEAARQALSFL 308
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P+S +K++L+ V D+ + R
Sbjct: 309 PESDYKRALLWVPDYVVAR 327
>gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
Length = 326
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 167/322 (51%), Gaps = 5/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYR 60
+++ ++ME + S V ++ + Y++ GK++RPM A M
Sbjct: 6 QIKEPIREEMELFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 SERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EV 179
I+ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A
Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMG 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + Q + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I
Sbjct: 186 ACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ EK + +++ + +K+ ++ ++ L + + QKA + L
Sbjct: 244 YVLNTCSEEEKQWLINSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILD 303
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P S +K++L +V++ + R
Sbjct: 304 EFPTSPYKEALTLMVNYVIDRK 325
>gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 332
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 149/322 (46%), Positives = 209/322 (64%), Gaps = 2/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 12 ERLAEALSDDLAAVNALIRERMQSEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F +
Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFAKSFLL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++T + + L LS + T+AEGE+ QL+ S++L E Y+ VI+ KTA LFSAA EV
Sbjct: 132 MVDTGNLDVLRILSQASATIAEGEVLQLTASRSLATDEAVYMKVIRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG V +AL YG LGIAFQ+VDD+LDY G GKN+G+DFR K TLPVI
Sbjct: 192 GVIAGQGPEVCRALFDYGDALGIAFQIVDDLLDYEGTEA-TGKNVGDDFRERKLTLPVIK 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R E+ FW+ TI G+ +L+ A ++ + AL +T A + +AK +L
Sbjct: 251 AVARADAEERAFWQRTIEKGRQEEGDLETALGLLARHGALDETRAAAIEWAARAKAALAP 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPDS+ + L ++ D+ + R++
Sbjct: 311 LPDSALTEMLADLADYVVARIS 332
>gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
BVAF]
gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
BVAF]
Length = 324
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 124/323 (38%), Positives = 186/323 (57%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D+ VNF I KR+ S + +I +++Y+I SGGK++R + L A L Y+
Sbjct: 3 INQINKLIQQDIINVNFEIHKRLKSKITLINKLIQYIINSGGKKIRSSMVLLIAKSLTYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ HV++A IEFIH ATLLHDDVVD S +RRGK+ A +++GN SVLVGDF+ ++AF M
Sbjct: 63 KNQHVIIATLIEFIHAATLLHDDVVDTSEMRRGKITANIMFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E +S L ++ +AEGE+ QL + +T Y+ +I +KTA LF A + S
Sbjct: 123 MTELQSLRILSLMANAVNIIAEGEIMQLIHCHDPTITINHYMKIIYNKTARLFEVASQTS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A QAL +YG +GIAFQL+DDVLDY GK+ G D GKPTLP++
Sbjct: 183 AILANADIKQEQALGNYGKYIGIAFQLIDDVLDYDTSNTILFGKHTGNDLNEGKPTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A T +E + + I +G + L M++ +L T A + +A L
Sbjct: 243 HAIHHSTPKEASIIRQAIKNGN-NRHLLNIILNTMQQYGSLEYTRKCAETKINQAISCLS 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S +KK+L + F + R +
Sbjct: 302 ILPASPYKKALKNLAYFIIHRYH 324
>gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
Length = 322
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 132/319 (41%), Positives = 196/319 (61%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + N +IL+++ S+V M+ + ++I SGGKR+RP+L L A LE
Sbjct: 4 NDIYQVVETEFARTNEIILEQLSSNVPMVEKIGHHIIESGGKRMRPLLVLLAAKALESNE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
NH LLA IEF+HTATLLHDDVVD S +RRGK A +GN SVLVGDFL S+AF M+
Sbjct: 64 QNHPLLASIIEFLHTATLLHDDVVDTSDMRRGKATANAAFGNAPSVLVGDFLYSRAFEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ S E + LS C +AEGE+ QL KN +V E+ Y+ VI+ KTA+LF A+ +
Sbjct: 124 VQLGSMEVMAILSNATCVIAEGEVMQLMNVKNPNVGEDKYMDVIQGKTAMLFEASSHSGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A +AL+ +G +LG+AFQLVDDVLDY G +E+GKN+G+D GKPTLP+I A
Sbjct: 184 KLANASPEQAEALRLFGHHLGMAFQLVDDVLDYIGNADELGKNVGDDLAEGKPTLPLIFA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q ++ + + + I G E+L K I++ A+ T+ +A + +A +++ L
Sbjct: 244 MQNASQEQADVIRQAIRKGGT--EDLPKIIEIVQSCGAIDYTQQKAQEHVNQACEAIAIL 301
Query: 302 PDSSWKKSLMEVVDFCLQR 320
D+ K++L + D + R
Sbjct: 302 ADTPAKQALQTLADMAINR 320
>gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 346
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 142/326 (43%), Positives = 204/326 (62%), Gaps = 5/326 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L L DM V+ LIL R+ S V +IP + ++++ +GGKRLRP+LT+A A
Sbjct: 21 EALARLAKVDMAAVDALILDRMQSSVPVIPLLAEHIVSAGGKRLRPLLTIAAARSATADR 80
Query: 62 DNH-----VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + LA ++EFIHTATLLHDDVVD S RRGKVAA L+WG+ TSVLVGDFL ++
Sbjct: 81 PDADLTAALKLAASVEFIHTATLLHDDVVDGSERRRGKVAAHLIWGSATSVLVGDFLFAR 140
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
AF +++ET AL L+ + +A+GE+ QL+ + +L++ +E YL +I +KTA LF+AA
Sbjct: 141 AFELMVETDQIRALGILAQASSVIAQGEVLQLTRAHDLNLDQETYLRIISAKTAELFAAA 200
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
E ++ G AL+SYG+NLG+AFQL DD LDY G +GKN G+DFR GK T+
Sbjct: 201 AESGAVGVGADPKTTSALRSYGLNLGLAFQLADDALDYGGSSEALGKNAGDDFREGKVTM 260
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P++LA R RE FW TIN + + ++ ++A ++ A+ T A Y AK
Sbjct: 261 PLLLAVARTRGREDAFWDRTINGNQRTDDDFRRARELIVGTGAVSATLDAAGEYADAAKT 320
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L LP+ WK +L + DF + R +
Sbjct: 321 ALGVLPNGEWKAALERLADFAVSRAS 346
>gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
Length = 324
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 176/322 (54%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + +++E + SD +I V++Y++ GK++RP+L + A +
Sbjct: 3 IKEVTVSVSQELETFRQRYKVALKSDNSLIDKVMRYILKQQGKQVRPLLVMLGAKVCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +E +H+ATL+HDDVVD + +RRG + VW N+ +VL+GD++LS+
Sbjct: 63 ADASYRAAIMVELLHSATLVHDDVVDGAEMRRGLASINAVWKNKIAVLIGDYMLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ K +L +S ++EGE+ Q+ +++LD++EEDYL VI KTA L S + +
Sbjct: 123 SLDHKDYRSLHMVSDAVRRMSEGEILQIQKTRSLDISEEDYLKVISDKTASLLSTSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+AL++YG LG+AFQ+ DD+LDY G+ N+ GK +G D ++ K TLP+I
Sbjct: 183 GASVTDDEEKIEALRNYGEFLGLAFQIRDDLLDYTGDSNKTGKQLGIDIQDKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E+ +S + K + +R++ L + A + KA +L
Sbjct: 243 ALGQAERSEQKRIRSILKSSKKRAMKSGEVMDFVRKSGGLEYSSEVAEGFASKATAALEV 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS ++SL +VDF ++R +
Sbjct: 303 FDDSEARRSLELLVDFVMKRQH 324
>gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM
12444]
gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM
12444]
Length = 337
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 147/320 (45%), Positives = 208/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA+A +L Y
Sbjct: 16 LAPMMALVAEGMNSVNAVILDRMQSRIPLIPTLAGHLIAGGGKRMRPMLTLASAALLGYG 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA A+EFIHTATLLHDDVVD S +RRGK A +V+GN +VLVGDFL S++F +
Sbjct: 76 GSRHYKLAAAVEFIHTATLLHDDVVDGSDMRRGKKTANIVYGNPATVLVGDFLFSRSFEL 135
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + L LS + ++EGE+ QL + +D TEE YL +I +KTA LFSAA ++
Sbjct: 136 MVEDGSLKVLRILSNASAVISEGEVDQLVAQRQIDTTEEMYLDIIAAKTAALFSAACRIA 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A ++ AL +YG NLGIAFQL DD +DY + EMGK+ G+DFR GK TLPVIL
Sbjct: 196 AVVAERPDADELALDAYGRNLGIAFQLADDAIDYDSDAAEMGKDQGDDFREGKMTLPVIL 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ RG + E+ FW+ I + S +L A ++R + A+ T RA Y Q+A D++
Sbjct: 256 AYARGDEEERGFWQQAIAGERSSDADLAHAISLIRRHDAVHATRERARMYAQRAIDAISG 315
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S+ K ++ E +F + R
Sbjct: 316 FPASAAKAAMTEAAEFAVAR 335
>gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
Length = 324
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 122/319 (38%), Positives = 194/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +VN ++ + + SDV +I + Y+I +GGKRLRP+LT+ + L Y D
Sbjct: 8 FQQNLEHDLSRVNLVVNQAVQSDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYDDDK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V +++
Sbjct: 128 SGSLKILEVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + ALK++GM +G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I Q
Sbjct: 188 AGATHEQETALKNFGMYMGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQ 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G ++ + + E + + E+ AL +A +A L+ LP+
Sbjct: 248 QGNDVAAQDVRTALQNADR--EYFDQIHAHVTESDALNYCMEQAKKAVAQAIGCLKMLPE 305
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ ++ ++ + ++R++
Sbjct: 306 NEVTVAMRQMAELSVERVS 324
>gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 320
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 170/320 (53%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +D+ V I K + S ++ L+ +GGKRLRP L + +
Sbjct: 1 MLDFFSLIREDLGMVESEIRKVVQSRDSLLTKTSLQLLNAGGKRLRPAFALLAGRLYDAD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + LA A+E IH ATL+HDDVVDDS RRG + WGN+ S+ GD+L +++ +
Sbjct: 61 VEKLIPLAVALELIHMATLVHDDVVDDSMTRRGTPTVKANWGNKISMHTGDYLFAKSLVL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ K E L+ + + EGE+ Q+S + + + + DY + I+ KTA+L +A+ ++
Sbjct: 121 ISTYKEPLIAELLAKTSVKMCEGEIHQISTAYSANQSWRDYFYRIERKTALLIAASCQLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG + L +G LG+AFQ+ DD+LD + E+GK IG D R G T+PVI
Sbjct: 181 AVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVADQRELGKPIGGDLRQGILTMPVIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ + + + + + + +K+A +++E + + A Y KAK++L+
Sbjct: 241 SLEKS--PRRERLRELVEIREKTEDQVKEAIELIKEAGGIQFSFEVAQRYIAKAKNNLKY 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD KK ++ DF R
Sbjct: 299 LPDRPVKKVFEQIADFIGVR 318
>gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
Length = 320
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 137/321 (42%), Positives = 200/321 (62%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + D + VN LI+ ++ SDV+++ ++ +Y++ +GGKRLRP+L L A L Y+
Sbjct: 1 MQSFHKVVEADFDAVNRLIVAKLHSDVDLVENIGQYIVDAGGKRLRPLLVLLAAKALGYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA IEFIHTATLLHDDVVD SALRRG+ +A WGN SVLVGDFL S+AF M
Sbjct: 61 GQQHIELAAIIEFIHTATLLHDDVVDVSALRRGRPSANAQWGNAPSVLVGDFLYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + + +S ++EGE++QL +K+ DVTE++Y+ VI KTA LF AA E
Sbjct: 121 MVGVGNIDVMAIMSDTTNVISEGEVQQLVNAKDPDVTEQNYMAVIHKKTAALFEAACETG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++IAGV + R ++K G +LG+AFQLVDD LDY G +GKN+G+D GKPTLP+I
Sbjct: 181 AVIAGVSSEQRASIKQIGYHLGVAFQLVDDALDYHGNTESLGKNVGDDLAEGKPTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+GT E ++ I G + L++ I+RE L T A + +A +
Sbjct: 241 TMAQGTPEEAALIRTAIQQGGVDK--LQQIISIVRERGGLEYTMRCANRHADEALTLIDQ 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S ++ +L ++ F + R
Sbjct: 299 LPTSPFQSALADLTRFSVSRS 319
>gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 318
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L D+ D++ V + + S+ +++ + +L +GGKRLRP L L +A Y
Sbjct: 1 MLPLLDVVRDDLDIVERELYAVLKSNNQLLTESSSHLFRAGGKRLRPALALLSAKFYNYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+E +H ATL+HDDVVD + LRRG + WGN+ SV GD+LL++A +
Sbjct: 61 LQKVLPLAMALELVHLATLVHDDVVDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAMIL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +S + L+ + EGE+ Q + D+ DYL IK KTA+L AA ++
Sbjct: 121 VSVYRSPVIIGVLAHSCVKMCEGEIIQFAGLNQCDL--RDYLRRIKYKTALLIQAACQLG 178
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + + L +G LG+AFQ+ DD+LD + +GK G D R G TLPV+L
Sbjct: 179 AVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVADQKRLGKPTGGDLRQGIITLPVML 238
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + +N + + E++++A + +E + A Y KA L+
Sbjct: 239 A--LARSPEDGRLAALVNKTEKTAEDVREAIRLTKEYGGVDLAFQVADQYLDKAHGYLKM 296
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD +++ V DF R
Sbjct: 297 LPDIPARENFARVTDFVRVRT 317
>gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
Length = 332
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 141/308 (45%), Positives = 199/308 (64%), Gaps = 2/308 (0%)
Query: 15 VNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN +I R+ S+ IP V +L+ +GGKRLRPMLTLA A M Y G H+ LA +EF
Sbjct: 25 VNAMIRDRMASEHAPRIPQVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHIHLAATVEF 84
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L
Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + T+AEGE+ QL+ + +L TE+ Y+ V++ KTA LFSAA+EV IAG +++QA
Sbjct: 145 ANASATIAEGEVLQLTAAADLATTEDIYIKVVRGKTAALFSAAMEVGGEIAGQDPAIKQA 204
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L YG LGI+FQ+VDD+LD G GKN+G+DFR K TLPVI A E+ FW
Sbjct: 205 LFDYGDALGISFQIVDDLLD-YGGTKATGKNVGDDFRERKLTLPVIRAVAAADADERAFW 263
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ TI G+ +L A ++ + L T A + KAK++L +PD + K L+++
Sbjct: 264 ERTIQKGRQQDGDLDHAIALLHRHGTLESTRQDAILWAAKAKEALGVIPDHALKTMLVDL 323
Query: 314 VDFCLQRL 321
D+ + RL
Sbjct: 324 ADYVVARL 331
>gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
Length = 322
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 134/319 (42%), Positives = 198/319 (62%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++
Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNH 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 66 HHELAAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQ 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 126 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 186 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLS 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+GT+ ++ + I G E+ F ++ + AL T A A +++ LP
Sbjct: 246 QGTEEQRALARQAIEQGGT--EHFDAIFSAIQTSGALEYTRKAAEREASAAAEAIIALPP 303
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+E+ F LQR +
Sbjct: 304 SQFRQTLIELCAFSLQRQS 322
>gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
Length = 341
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 97/336 (28%), Positives = 163/336 (48%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + ++ V+ +I + I +I D ++ +GGKR+RP + L + +
Sbjct: 4 DPLFEALKEKIKIVDEVIFELIPEKEPKIIYDAARHYPLAGGKRIRPFIVLTSTEAVGGN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ---- 116
+ V A A+E +H +L+HDD++D RRG+ VWG ++L GD L S+
Sbjct: 64 PEKAVYAAAAVELLHNYSLVHDDIMDMDEKRRGRPTVHKVWGVNMAILAGDLLFSKVFEA 123
Query: 117 -AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
A V K + L+ +S + L EG+ R L VT ++Y+ +I KT L A
Sbjct: 124 VAKIPVEAEKVVKVLDVISKTSNELCEGQARDLEFENKETVTIDEYMKMISGKTGALIDA 183
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + LI N QAL YG N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 184 SATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 243
Query: 236 LPVILAFQRGTKREKNFWKSTIND-----------GKISVENLKKAFIIMRENRALVDTE 284
+ V + ++ +K + + E +KKA ++++ +
Sbjct: 244 IIVAHFLENASEEDKLKFFKVFGKYAGDVKGEGIIEEDIQEEVKKAIDLLKKYGSTDYAA 303
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A ++AK++L+ LP+S +K L + DF ++R
Sbjct: 304 NLARKLIEEAKEALKALPESEARKHLELLADFIVER 339
>gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 323
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ + S V ++ + Y++ GK++RPM +A +
Sbjct: 4 LNDIQKPIANELAAFEHKFKASMQSSVPLLDRITHYIVKRKGKQMRPMFVFFSAGLCGSI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTA+L+HDDVVD++ RRG + +W N+ +VLVGDFLLS+ +
Sbjct: 64 NESTFRGASLVELLHTASLVHDDVVDNANERRGFFSVNALWKNKVAVLVGDFLLSKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ +S ++EGEL Q+ ++ LD+ E Y VI+ KTA L ++
Sbjct: 124 SVDNNDFHLLKIVSEAVEQMSEGELLQIEKARKLDIEESVYFEVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ V + + ++G +GIAFQ+ DD+ D+ +++GK +G D + K TLP+I
Sbjct: 184 AASTDVDEETVKKMHAFGEKVGIAFQIKDDLFDFGL--DDVGKPLGNDIKEKKMTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + K EK + + + + + + +R + L + + Y Q+A + L
Sbjct: 242 ALSQTDKSEKRRIINLVKNHNEDNKKVAEVIAFVRSSGGLDYATEKMFQYQQEAFEILNS 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+ ++ L ++V + +R
Sbjct: 302 FPEGIYRTGLEQLVRYTTERK 322
>gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
Length = 337
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 121/321 (37%), Positives = 196/321 (61%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ + ++KV+ I ++ S VE++ ++ +L+ +GGKRLRP+LT+ ++ + Y+G
Sbjct: 17 EEIKSAYQEQLKKVDDHIKLKLSSHVELVGEMATHLMSTGGKRLRPLLTICSSEIFNYKG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H+ LA +E IH ATLLHDDV+D S RRG +WGN++S+L GD+LLS+ F M+
Sbjct: 77 NRHINLAACVELIHNATLLHDDVIDKSESRRGFKTTNAIWGNKSSILAGDYLLSRCFEMM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ SQE L+ LS V+ +A+GE+ QL K +D+ E++YL +I +KTA LF A++ V
Sbjct: 137 VDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMVEKNYLDIISAKTASLFGASMRVGG 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I N ++AL+SYG NLGI FQ+ DD+LDY + GK IG DF GK TLP+IL
Sbjct: 197 CINDRSNKEKEALESYGRNLGICFQITDDILDYSSKEQVFGKKIGNDFLEGKITLPIILL 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
FQ+ T +E+ + + S + ++ ++ + + + + RA + A DSL
Sbjct: 257 FQKSTPKEREMLQKYFSQSVRSENDFEQTLKLINKYQIIETCKKRADYFSNVASDSLSVF 316
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + + RLN
Sbjct: 317 EKNFVVEKLQELSFYIVNRLN 337
>gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
Length = 325
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 115/321 (35%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDILAPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDN 66
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 67 MQHAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G + L + I++++ AL + RA + A +L
Sbjct: 246 ALAHSTGEEHAIIRRSIATGGVD--QLTRVIEIVQKSGALDYCQRRAQEETEAALQALSI 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L D+ ++++L+ + L R+
Sbjct: 304 LSDTPYRQALINLTRLALHRI 324
>gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 306
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 124/296 (41%), Positives = 179/296 (60%), Gaps = 1/296 (0%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
DV +I + Y+I GGKRLRP+L + +A L Y+G+ H A IEFIHTATLLHDDVV
Sbjct: 11 DVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDVV 70
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S +RRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE+
Sbjct: 71 DESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEV 130
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
QL + D TEE Y+ VI SKTA LF AA ++ +++ V AL++YG LG AF
Sbjct: 131 LQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAF 190
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL+DDV+DY + EMGKN+G+D GKPTLP++ A + + I + +E
Sbjct: 191 QLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHAMRHTNAENAQMIREAIENAN-GME 249
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L +M++ +L TE +A KA L+ LP+S +K++L+ + ++R
Sbjct: 250 RLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVLPESEYKQALIALAHMAVKRS 305
>gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
Length = 324
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 121/318 (38%), Positives = 191/318 (60%), Gaps = 2/318 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +VN +I + + S+V +I + Y+I +GGKRLRP+LT+ L D
Sbjct: 8 FQQNLETDLSRVNVVINRAVQSEVALISQIGTYIISAGGKRLRPILTILAGKCLGCDSDK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N +++E +YL VI+ KTA LF AA +V +++
Sbjct: 128 SGSLKILEVMAEATNIIAEGEVMQLMNIGNTEISETEYLQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + QALK YG ++G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I +
Sbjct: 188 AGATSGQEQALKDYGAHIGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMR 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G++ + + S + + ++ AL +A KA +L+ LP+
Sbjct: 248 QGSEEAARDVRHALQHADRSY--FETIHNHVMQSGALDYCVQQARHAADKAILALQMLPE 305
Query: 304 SSWKKSLMEVVDFCLQRL 321
+ ++ E+ + L R+
Sbjct: 306 NEVTHAMRELAEQSLSRI 323
>gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
36D1]
gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
36D1]
Length = 320
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 169/321 (52%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ML D+E + + + S+ +I + L+ +GGKR+RP+ L A +Y
Sbjct: 3 VQMLYSFLKTDIELIEQELANAVASNAALIQQASESLLKAGGKRIRPVFVLLGAKFGDYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ A
Sbjct: 63 IERVKNVAVALELIHMASLVHDDVIDDAELRRGKPTVKAKWDNRIAMYTGDYILATALEY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + A + L+ + GE+ Q+ YL IK KTA+L +A+ ++
Sbjct: 123 ITKVEDLSAHQILADTLVEVCVGEIEQIKDKYRFHQNLRCYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G ++ + L +G N+G+++Q++DD+LD+ G ++GK GED R G TLPV+
Sbjct: 183 AIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTGTEKQLGKPAGEDLRQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K K + L+ +++++ A+ + + Y +KA +L
Sbjct: 242 ---FAREDPKIRKKLEYVHEHMPKAELEDVVRLVKQSGAIERSYAVSNCYLEKALGTLEQ 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ +KK L ++ + +R
Sbjct: 299 LPDTRFKKMLADLARYMGKRK 319
>gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
Length = 323
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G
Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++
Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G + + I +E L M E+ +L T+ RA +KA +L +
Sbjct: 244 MRHGNAEQAAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQQRAEEEAEKAIAALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQR 320
DS +K++L+ + +QR
Sbjct: 303 ADSEYKEALVALAHMSVQR 321
>gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
Length = 323
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 132/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G
Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+
Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++
Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A
Sbjct: 184 IIAQAPAEIELALQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + I +E L M E+ +L T+ RA +KA +L +
Sbjct: 244 MNHGNAEQSTMIREAIEKAN-GMEKLDAILAAMHEHGSLEYTQQRAEEEAEKAIAALAPI 302
Query: 302 PDSSWKKSLMEVVDFCLQR 320
DS +K++L+ + +QR
Sbjct: 303 ADSQYKEALVALAHMAVQR 321
>gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.]
Length = 326
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 107/321 (33%), Positives = 184/321 (57%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + KD+ ++ + + ++++ DV K+++F+GGKRLRP+L + +A + Y+G
Sbjct: 6 QELLSIVGKDLAEIEVALTDNLTPYLDIVSDVAKHILFAGGKRLRPLLMVLSARICNYKG 65
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + E++H ATLLHDDV+D + LRRGK A +W N T VL GDFLL++ +
Sbjct: 66 GYDKVFSTIFEYLHAATLLHDDVIDGAELRRGKPVANSIWKNSTVVLTGDFLLARGLSIA 125
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
T+ ++ ++ + +++GE+ QL ++++TEE+Y +I KTAVLF A +S+
Sbjct: 126 AATEKPSVIKIVAEITENMSQGEIEQLLRKGDINLTEEEYRKIIWRKTAVLFQGACRISA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A +A+ +YG NLG+AFQ+ DD+LDY + +GK +G D + GK TLPVI A
Sbjct: 186 RLANASKREEKAVSNYGYNLGMAFQMADDLLDYTLDTKVIGKGVGADLKEGKVTLPVIHA 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +++ + I + K SV N ++ + + TE A + ++AK+SL
Sbjct: 246 LKEADSKDRLKMERIIKNNKFSVRNFNSLIKLLEKYEGISYTEKCAKDHIKEAKESLLVF 305
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
S + L + D+ L R +
Sbjct: 306 EPSETRNILEYIADYTLLRKS 326
>gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 334
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 116/324 (35%), Positives = 182/324 (56%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ + + + ++ +I R+ S V +I + Y+I +GGKR+RP L + A L
Sbjct: 10 LSQILAPISLEFKGLDEVIRLRLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANG 69
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF
Sbjct: 70 KESAHTLEMAAVVEFIHTATLLHDDVVDESTLRRGRETANAAFGNAASVLVGDFLYSRAF 129
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M++ ++ LS T+AEGE+ QL + +V E YL VI+ KTA LF A+ E
Sbjct: 130 QMMVAPNDLRVMQILSDATNTIAEGEVLQLLNMNDPEVDEASYLQVIRYKTAKLFEASTE 189
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++A +S R+ ++G ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+
Sbjct: 190 LGAILASATDSQREQAAAFGRHIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPL 249
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I + G+ E+ ++ I + E++ + ++ + AL T+ A A D
Sbjct: 250 IYLLENGSNEERLLVRAAIEQNQDLPEDVFAQILGAVQSSGALDYTQAVAKREADLALDC 309
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
+ P + +L ++ + L R
Sbjct: 310 ISEFPSNEATTALRDLCTYSLARQ 333
>gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437]
Length = 323
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + +D+ +V + K I +D + +L+ +GGKR+RP+ L + EY
Sbjct: 3 LADIYNSLKQDLREVERELEKSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH ATL+HDDV+DD++ RRG+ + W N+ ++ GD++L ++ +
Sbjct: 63 VDKLKQVAVPLELIHMATLVHDDVIDDASTRRGRPTVKAKWDNRVAMYTGDYILGRSLAI 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + + LS + GE+ Q+ D + YLH IK KTA+L S + E+
Sbjct: 123 VSQIEDPKIHRVLSPAIYQMCRGEIEQIRDFFATDPSLIRYLHRIKRKTALLMSVSCELG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L++G + + L+ +G +G+AFQ+ DD+LD G+ +GK G D R G TLPVI
Sbjct: 183 ALVSGAAPAEVRRLRLFGYFVGMAFQITDDILDLTGDEQTLGKPAGSDLRQGNITLPVIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++G + ++ ++ + L + +R++ + E A Y KA L
Sbjct: 243 ILKKGPEEDRERILQYLHSRG-DAKALPEILRRVRQSDGIPYAEGLARRYLDKALQVLEG 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP ++SL + +F R
Sbjct: 302 LPAGDTRESLRLIAEFVAGRS 322
>gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 319
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 106/316 (33%), Positives = 182/316 (57%), Gaps = 3/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
DM+K++ +L I ++ I V+ L+ SGGKR+RP+L +A A + EY D
Sbjct: 5 YAFVKDDMKKIDDFLLSNIKTNSPTIKKAVEDLVLSGGKRVRPLLVIAIARLGEYNEDKI 64
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A +IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ +
Sbjct: 65 IPIAASIEIMHMATLVHDDIIDDSKMRRGRESVQSKYGKETAVFTGDFLFSQAFNVIADI 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
S+E L+ ++ + EGE+ Q NLD++ YL I KTA+LF+ + E + A
Sbjct: 125 ISKENLKLIARGVKAICEGEIEQFDNRYNLDISVLRYLKRIYRKTALLFAISCESGATQA 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G+ + +A++ +G+N+G+AFQ+ DD+LDY G +GK +G D NG TLP+I A
Sbjct: 185 GLSKELTRAMRRFGLNVGMAFQIADDILDYEGVEKIVGKPLGSDVLNGIYTLPMIYALST 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K+ + + K+S +++ + ++ + + + A Y +KA L +PD
Sbjct: 245 SHKK---AIEDILLKDKLSKKDVNRVVKEVKLSGGIDFAKDLALKYVKKAIKFLDIMPDC 301
Query: 305 SWKKSLMEVVDFCLQR 320
K ++++ + L+R
Sbjct: 302 EQKDLMIDIANDALKR 317
>gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
Length = 325
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A Y G+
Sbjct: 8 ALLAPVAADMRAVDAVIRQRLSSEVPLIEQIGEYIISAGGKRLRPVILLMSARAFGYDGN 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++
Sbjct: 68 RHHELAAVVEFIHTATLLHDDVVDESELRRGRETANAVFGNAASVLVGDFLYSRAFQMMV 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ S +E LS +AEGE+ QL + DVT E YL VI+ KTA LF A+ ++ ++
Sbjct: 128 DAGSMRIMEILSNATNVIAEGEVLQLLNMHDPDVTIERYLQVIRYKTAKLFEASAQLGAV 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG ++ +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++
Sbjct: 188 LAGADAAMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLL 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT ++ + I G E+ F + + AL T A + A+ + + P
Sbjct: 248 EYGTPEQRVLAREAIVQGGT--EHFDAVFSAIHASGALDVTFEAARREAEAAEKAAQQFP 305
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S WK +L+ + +F LQR +
Sbjct: 306 ASDWKDTLIALCEFSLQRQS 325
>gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
Length = 324
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 167/321 (52%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ M + SDV ++ ++ Y++ GK++RPM +A
Sbjct: 5 IKDIQAPIQDVMANFEGKFRSFMKSDVFLLDKIMNYIVKRKGKQMRPMFVFLSAGTGGEI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 65 NEMAYRGAALIELLHTATLVHDDVVDDSNYRRGFFSINALWKNKIAVLVGDYLLSRGLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + E L+ +S ++EGEL Q++ ++ LD+TEE Y +I+ KTA L ++ V
Sbjct: 125 SIDNEDFEQLKIVSNAVREMSEGELLQIAKARRLDITEEVYYDIIRQKTASLIASCCAVG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG+ + +G +G+AFQ+ DD+ D E+GK +G D + K TLP+I
Sbjct: 185 ASAAGLNKEQISMFREFGEKVGMAFQIKDDLFD--YGTAEIGKPLGIDIKEKKMTLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + EK + + + +K+ ++++ + + Y +A +
Sbjct: 243 ALNHAKRSEKRHIINLVKNKSHKSAKVKEVIAFVKDSGGIEYSNEVMRRYSNEAIALMND 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S +K SL+++V F ++R
Sbjct: 303 FPESDYKTSLIQLVQFTIERK 323
>gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 317
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 116/313 (37%), Positives = 188/313 (60%), Gaps = 1/313 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLAC 69
D EKV + K + S V+ I V Y++ GGKR+RP L L A M+ Y + +LA
Sbjct: 5 DKEKVESTLRKYLDSSVDFILQVGGYILDGGGKRVRPYLVLKFASMIRGYNKEEDYILAS 64
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A+E++HTA+LLHDDVVD+S RRG++ A V+GN T+VLVGD++ + A + +
Sbjct: 65 ALEYLHTASLLHDDVVDESEKRRGRLTANRVFGNDTTVLVGDYMYANALYLFSIYGDIDM 124
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++ +S +AEG+L +L N D T +DY ++ KTAVLF + V + +A +
Sbjct: 125 IKNVSDSVKKMAEGQLLELKKIANFDTTFDDYYKIVLGKTAVLFGSCCYVGTALASEDKN 184
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+++ YG+NLG+AFQ+VDD+LDY G+ ++GK++ D + GK T P+++ K +
Sbjct: 185 LKENAYQYGVNLGVAFQIVDDILDYEGDEEKVGKSLMNDLKEGKITYPLLVVKDILNKED 244
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K+F KS + D SVE+L KA I+ + + + A SY +KA ++L+ PD+ K+
Sbjct: 245 KDFIKSVVLDKNPSVESLLKAKKIVEDYGGIEKAKADAESYVRKAIENLKDFPDNKDKQD 304
Query: 310 LMEVVDFCLQRLN 322
L+ + + ++R +
Sbjct: 305 LINLAHYIVKRES 317
>gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
Length = 325
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ ++D ++ME + + S V ++ + Y++ GK++RPM TA +L
Sbjct: 4 VSQIKDPVNQEMELFETKFRESMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLLNNG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGD+L S+
Sbjct: 64 EVNERTYRGASIIELIHTASLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLFSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ ++ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A
Sbjct: 124 LLSLDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYDIIRQKTATLIAACCS 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + ++ + + +G G+AFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 MGACSVKPESEEVETFRKFGEFCGMAFQIKDDLFDY--GEQKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I +K EK + +++ + + +K+ +++ L E + + + ++A D L
Sbjct: 242 IHVLNICSKSEKKWLINSVKNHNRDKKRVKEVIAFVKDKGGLTYAESKMHEFKKQALDLL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P S+++ SL +VD+ + R
Sbjct: 302 LSYPKSAYRDSLELMVDYVVDRK 324
>gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 313
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 129/311 (41%), Positives = 193/311 (62%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ ++ R+ S V +I + Y+I +GGKR+RP L L + L +RG LA +
Sbjct: 5 MRQVDAVLRARLSSKVALIDQIASYIISAGGKRMRPRLLLLFSEALGFRGPERYELAAVV 64
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHT+TLLHDDVVD+S+LRRG+ A ++GN +VLVGDFL S++F M++ KS LE
Sbjct: 65 ELIHTSTLLHDDVVDESSLRRGRATANSMFGNAAAVLVGDFLYSRSFQMMVSVKSMRVLE 124
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE+ QL + D+ ++YL VI+ KTA LF A+ + +++AG V
Sbjct: 125 VLAEATNVIAEGEVLQLMNMHDADLAVDEYLRVIRFKTAKLFEASARLGAVLAGASAEVE 184
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A YG +LG AFQLVDD+LDY G +E+GKN+G+D R GKPTLP+++A +RGT E+
Sbjct: 185 EACADYGRSLGTAFQLVDDLLDYEGNASELGKNVGDDLREGKPTLPLLIAMERGTAEERE 244
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G++ E L++ I+R AL T A + A+ +L LP S +++L+
Sbjct: 245 LIRHAIEHGEL--ERLQQIIDIVRRTGALEATREAAQAQADIARATLELLPVSKAREALL 302
Query: 312 EVVDFCLQRLN 322
E + R +
Sbjct: 303 EFCFRAVHRSS 313
>gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 319
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 107/318 (33%), Positives = 182/318 (57%), Gaps = 3/318 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ +DM+K++ IL + ++ I + L+ SGGKR+RP+L +A A M EY +
Sbjct: 5 YEFVKEDMKKIDEFILANVKTNSPTIKKAIDDLVLSGGKRIRPLLVIAIARMGEYSEEKI 64
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A +IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ +
Sbjct: 65 IPIAASIEIMHMATLIHDDIIDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQAFNLIADI 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
S+E L+ ++ + EGE+ Q NLD++ + YL I KTA+LF+ + E + A
Sbjct: 125 ISKENLKLIAKGVKAICEGEIEQFDNRYNLDLSIKKYLKRIYRKTALLFAISCESGASQA 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G+ + +A++ +G+ +G AFQ+VDD+LDY G +GK +G D NG TLP+I A +
Sbjct: 185 GLPKEMIRAMRHFGLEIGTAFQIVDDILDYEGVERVVGKPLGSDLLNGIYTLPLIYALKT 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K+ K + +S ++ ++ + + + A Y +KA L +PD
Sbjct: 245 DRKK---VIKGILRKRDLSRRDVNCIIKEVKLSGGIDYAKELALKYVKKAVKYLEVIPDC 301
Query: 305 SWKKSLMEVVDFCLQRLN 322
K +M++ D L+R +
Sbjct: 302 EQKSLMMDIADDVLKRNH 319
>gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6]
gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6]
Length = 319
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/323 (27%), Positives = 149/323 (46%), Gaps = 12/323 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++ LK E +N I + + + + ++LI +GGKRLRP++ L +A +
Sbjct: 2 SIKEEVLKRSEIINRAISEYLPVKEPEGLYNAARHLINAGGKRLRPVMCLISAEAVGGDV 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A AIE IH TL+HDD++D LRRG + + T++L GD L ++AF ++
Sbjct: 62 ESVIPAAVAIETIHNFTLIHDDIMDRDELRRGVPTVHVAYDEPTAILAGDTLFAEAFKIL 121
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH----VIKSKTAVLFSAAL 177
+ + E+ + E + K + A+
Sbjct: 122 SSCNVEAENLVKASRMLADVCIEICEGQYLDMSFEKREKISESEYLEMVRKKTAVLIASA 181
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +S +AL ++G+ GI FQ+ DDVLD G+ GK+ G D GK TL
Sbjct: 182 CAMPAVLFGMDSYAKALWNFGIYSGIGFQIHDDVLDITGKDKI-GKDWGSDIVEGKKTLI 240
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+I A + G + G SVE +++A ++E AL +A Y ++ K
Sbjct: 241 MIKAMELGVE------IEIFGRGSASVEEIEEAVEKLKECGALDYARQKAQEYVERGKRE 294
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L LPDS K L+E+ D+ + R
Sbjct: 295 LDVLPDSKAKSLLIELADYLVTR 317
>gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
Length = 325
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 122/308 (39%), Positives = 186/308 (60%), Gaps = 2/308 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +L DM +VN +I ++ SDV +I + +Y+I +GGKR RPM+ + A L
Sbjct: 6 VDQIRELAAPDMARVNTVIQAKLASDVALINQLSQYIIGAGGKRFRPMVLMLAAQALGGT 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A +E IHTATLLHDDVVD+S LRRG+ A ++GN SVL GDFL S+AF M
Sbjct: 66 SPWAAQMAAVVELIHTATLLHDDVVDESTLRRGRDTANALFGNAASVLTGDFLYSRAFEM 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + + L+ +AEGE+ QL + DV+E+ Y+ VI KTA LF+AA +++
Sbjct: 126 MVEVQEPRVMAILAQATNRIAEGEVLQLMNMGDADVSEDRYVDVIVRKTATLFAAATQLA 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G V AL +YG++LG AFQL+DDVLDY G+ GK++G+D GKPTLP+I+
Sbjct: 186 AVLEGQPEEVEAALTAYGLHLGTAFQLIDDVLDYTGDEAHTGKHVGDDLAEGKPTLPLII 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A QRG + + I + +++ + AL T +RA + +AK ++
Sbjct: 246 AMQRGDEATVAMIRRAIT--EQDARDIEAICSAIEHTGALAYTAHRAQAEADRAKQAIAA 303
Query: 301 LPDSSWKK 308
+PDS +K+
Sbjct: 304 VPDSPFKE 311
>gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
Length = 324
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 168/316 (53%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++++ + ++ +I VV+Y++ GK++RP+L + A + +
Sbjct: 9 PVSEELKSFRQKYKTALETENSLIDKVVRYILKQQGKQIRPLLVMLGAKVCGGVEEKTYR 68
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A E +H+ATL+HDDVVD + +RRG + VW N+ SVL+GD++LS+ ++ K
Sbjct: 69 AAIMAELLHSATLIHDDVVDGAEMRRGIASINAVWKNKISVLIGDYMLSKGLLFSLDNKD 128
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L +S ++EGE+ Q+ +++LD+TEEDYL VI KTA L S + + +
Sbjct: 129 YLFLHMVSTAVRRMSEGEILQIQKTRSLDITEEDYLRVISDKTASLLSTSSAMGAASVTD 188
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
ALKSYG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I A +
Sbjct: 189 DEVKINALKSYGEYLGLAFQIRDDLLDYTGDSKKTGKQLGIDIKDKKITLPLIYALRNSE 248
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
E+ KS + + ++ ++ L A + KA ++ L D+
Sbjct: 249 GSEQKKIKSILKSSRKRSMRSREVVDFVKAKGGLDYAAEVAEGFASKALAAIEKLEDNDA 308
Query: 307 KKSLMEVVDFCLQRLN 322
++SL +VDF ++R N
Sbjct: 309 RRSLNLLVDFVMKRQN 324
>gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
Length = 325
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 129/319 (40%), Positives = 195/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y++ +GGKRLRP++ L A L Y+G++
Sbjct: 9 LLAPVAEDMRAVDAVIRRRLGSEVVLINQIGEYIVSAGGKRLRPVILLLVANALGYKGEH 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 69 QHELAAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQ 128
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 129 ANSMRIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 188
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 189 SDADAATEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLS 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A+ + LP
Sbjct: 249 NGTEEQRALVRQAIEQGGT--EHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPP 306
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+++ F LQR +
Sbjct: 307 SLFRQTLIDLCAFSLQRQS 325
>gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. 217]
gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. 217]
Length = 333
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 148/322 (45%), Positives = 204/322 (63%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y
Sbjct: 12 EQLAAHLATKMEAVNVLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +
Sbjct: 72 GPFDVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S L+ LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV
Sbjct: 132 MVEPGSLRVLDILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG +AL YG LGIAFQ+VDD+LDY+G+V GKN+G+DFR K TLPVI
Sbjct: 192 GVIAGAPEDHVKALFEYGDALGIAFQIVDDLLDYQGDVKSTGKNVGDDFRERKLTLPVIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FWK TI G +L+ A +M+ + AL T A + +A+ ++
Sbjct: 252 AVAAASAEERAFWKRTIEKGDQRDGDLEHALTLMQAHGALEQTRAEALDWAARARAAIAV 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD ++ L + + + R++
Sbjct: 312 LPDHPVQRMLDNLAGYVVARIS 333
>gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans]
gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Herminiimonas
arsenicoxydans]
Length = 329
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 194/319 (60%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DM V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A L YRG +
Sbjct: 13 LIQPIAADMSAVDAVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANALGYRGTH 72
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++
Sbjct: 73 QYDLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDFLHSRAFQMMVT 132
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A++ L+ +AEGE+ QL + D++EE Y VI+SKTA LF AA ++ +LI
Sbjct: 133 VGNIRAMQILADATNVIAEGEVLQLLNMHDPDISEERYTQVIRSKTAKLFEAAAQLGALI 192
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG +A YG +LG AFQL+DDVLDY G ++GKN+G+D R GK TLP+I +
Sbjct: 193 AGASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGKNVGDDLREGKATLPLIYLME 252
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G ++ +S I +G E+ + + + AL T+ +A +A S+ LP+
Sbjct: 253 HGNTEQRELVRSCIENG--DEEHFDAVLLAVTTSGALDYTKRKAEEAAARAAASIAGLPE 310
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K +L+ + F + R +
Sbjct: 311 SQFKDALLNLSSFAVHRNH 329
>gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella
excrementihominis YIT 11859]
gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella
excrementihominis YIT 11859]
Length = 326
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 187/320 (58%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+
Sbjct: 8 VQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQ 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF +
Sbjct: 68 GKEHIFLATMIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAPAILTGDFMYSRAFQL 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ T++ E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++
Sbjct: 128 MVRTQNLRICEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMA 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG V + Y + LG AFQ++DDVLDY G +GKN+G D R GK T+P+I
Sbjct: 188 SVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTGTKVNIGKNLGTDLREGKMTMPLIY 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + ++ ++ +E++ + + + A+ + D+L C
Sbjct: 248 ALRHCSEEDAKIIRTAVSSNDPDLESVTRV---ILASGAIDACIEAGKKEVSRGIDALNC 304
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S++K SL+E++ ++R
Sbjct: 305 LPTSAFKNSLIELLSLTVER 324
>gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus halodurans C-125]
gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus halodurans C-125]
Length = 323
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +D+ + + + + + +++ +L+ +GGKR+RP+ L Y
Sbjct: 3 LADIYAHFQEDIFTIERELEEAVQARHDILRKASVHLLKAGGKRIRPVFVLLAGKFGTYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ ++A
Sbjct: 63 VNVLKHIAVPLELIHMASLVHDDVIDDADLRRGKKTIKSQWDNRIAMYTGDYMFAKAVQT 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S + GE+ Q+ N + Y IK KTA+L + + ++
Sbjct: 123 ATYFDDPNIHQIISNAINEMCLGEVEQIRDQYNPNQHLRIYFRRIKRKTALLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A ++ Q L +G +G++FQ+ DDVLD+ G ++GK G D G TLP +
Sbjct: 183 ALAAKADPAIVQKLYYFGYYVGMSFQITDDVLDFVGTEEQLGKPAGSDLLQGNVTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + + G SV ++++ + + + + Y +KA L
Sbjct: 243 ALHHDMHAKRLIEQVLADRGNNSV-HMEEVIAAIVSSGGIDYALSISDLYLKKAMRMLDH 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K+ L E+ ++ +R
Sbjct: 302 LPDDEPKQFLQEIANYIGRRK 322
>gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
Length = 325
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 196/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++
Sbjct: 9 LLAPVAEDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEH 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 69 QHELAAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQ 128
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 129 ANSMRIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 188
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 189 SGADAATEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLS 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A+ + LP
Sbjct: 249 NGTEEQRALVRQAIEQGGT--EHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPP 306
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+++ F LQR +
Sbjct: 307 SLFRQTLIDLCAFSLQRQS 325
>gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 326
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 168/322 (52%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++ DM+ + S V ++ ++ Y++ GK++RPM +A +
Sbjct: 6 LDDIRNVVKDDMKDFEKKFRDSMKSKVMLLDKIMSYIVKRNGKQMRPMFVFLSAHLAGNV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ A IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 NDSTQRGAALIELLHTATLVHDDVVDDSDYRRGMFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I L+ +S ++EGEL Q+ ++NL++ EE Y +I+ KTA L ++ V
Sbjct: 126 SINHGDFHLLKIVSNAVREMSEGELLQIEKARNLNINEEIYFEIIRQKTASLIASCCAVG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
G ++ + K +G +G+AFQ+ DD+ DY +GK +G D + K TLP+I
Sbjct: 186 VSSTGADEALVERAKMFGEKIGMAFQVKDDLFDYETSE-MIGKPVGIDIKERKMTLPLIY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + EK I + +K+ +RE+ + T ++ ++A L
Sbjct: 245 ALNKASWLEKKRIMFIIKNQTHKSAKVKEVLQFVRESGGIEYTRTVMENFREEAYGFLEE 304
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS +KK+L ++VD+ + R +
Sbjct: 305 FQDSVYKKALRDLVDYTIARKH 326
>gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2]
gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2]
Length = 327
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 182/320 (56%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D+ + + + +++++ + +L+FSGGKRLRP+L L ++ + Y G
Sbjct: 7 QRILASVSEDLTAIEGALATNLRPNLDLVRQIAGHLLFSGGKRLRPLLFLLSSRLCNYGG 66
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D + ++ E++H ATLLHDDVVD++ +RRG+ A WG VL GDFLL+++ C+
Sbjct: 67 DLALDVSTLFEYLHAATLLHDDVVDEAEMRRGRKTAHSTWGAAQVVLTGDFLLARSLCLA 126
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
T E + +S + +++GE+ QL L+++E +Y+ +IK KTAVL A +
Sbjct: 127 ARTGRPEIINVISGITEEMSQGEIDQLDKKGKLNLSEAEYMAIIKGKTAVLIQGACRSGA 186
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ QAL YG +LG+AFQ+ DD+LDY + +GKN G D R GK TLP+ILA
Sbjct: 187 ILSRAPADREQALADYGYHLGMAFQMADDLLDYTADAATLGKNPGADLREGKLTLPLILA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R ++++ +S I+ + ++ K + + + DT+ RA + +AK L
Sbjct: 247 LERADGPDRSWMESVISTQGFNDDDFYKLVEKLHLYKGIDDTQSRAEHHVDQAKKCLEPF 306
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
D K +++ + D+ + R
Sbjct: 307 DDCGAKDTMIMLSDYAIARK 326
>gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9917]
gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9917]
Length = 323
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +D+E + + I + ++ ++L +GGKRLRP + L + L GD
Sbjct: 6 ELLQPVEQDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALSPSGD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + ++ +VL GDFL +QA
Sbjct: 66 LTARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E ++ LS V LA+GE++Q + T YL KTA L + + +
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTGQTFATYLEKSYCKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G QAL YG LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGESPDHLQALYHYGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E++ I +L++A ++R + A+ T A ++ ++A+++L
Sbjct: 246 YAL-----EEQHTLAGLIEREFSGDGDLEQALELVRASSAIPRTRELAETFAREAREALA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S +++L+++ DF L RL
Sbjct: 301 WLPESPSRRALLDLPDFVLGRL 322
>gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 326
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ D++ V I++R+ S +I ++++ SGGKRLR M+ L + + YR
Sbjct: 9 EIPSTLRHDLQAVEDRIMQRVESQSALITAAGQHIVSSGGKRLRAMMVLLASQLGRYRLS 68
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + A A+E IH A+L+HDD+VDD+ RRGKV W +++VGD+L + A +
Sbjct: 69 DSLHAATAVELIHAASLVHDDLVDDADRRRGKVTVHAKWDQGVALMVGDYLFAVAAGEMA 128
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ + T++ EL + + E Y I KTA LF AA +
Sbjct: 129 LAPDPRVIQIFAESVMTISASELHPVMATLPTATALEQYYAKIGGKTAALFEAAAAAGVV 188
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
G +A YG ++G+AFQ+VDD+LD+ +GK G D R G TLP+ILA
Sbjct: 189 CGGGSPEEIEAAARYGYDIGLAFQIVDDILDFVSTEETLGKPAGNDLREGTITLPLILAV 248
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + ++S E + +A +++ + +A Q+ +L P
Sbjct: 249 KDHHE--HPLVNLLDQYEQLSDEQVTQAISQVKQLGGIDQAIAQAREITQRGLAALDIFP 306
Query: 303 DSSWKKSLMEVVDFCLQR 320
S K+ L E+ D+ L R
Sbjct: 307 PSDAKELLREIADYVLDR 324
>gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 324
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 111/323 (34%), Positives = 181/323 (56%), Gaps = 2/323 (0%)
Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK+ + ++ +++ V + + S V ++ Y++ SGGKR+RP LT+ ++E
Sbjct: 1 MKIFKPFEVVREELLSVEEFSRELLSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVE 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +A +E++HTATLLHDD+VD + LRRG+ + V+GN +VLVGD++ ++A
Sbjct: 61 APLDRLIPVATVMEYMHTATLLHDDIVDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKAI 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E L+ + +AEGEL QL ++++TEE+Y +I KTA L S E
Sbjct: 121 YVLAVYGGPEVLKTAAKTVQDMAEGELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++ G R+ALK YG +G AFQLVDD DY + +GK G D R GK T P+
Sbjct: 181 CGAIVGGASEKERKALKDYGTYIGYAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A +R T+ E+ + +N+ + E ++ + E T A + ++AK+SL
Sbjct: 241 LWALKRATEEEREAVERVLNNPSPTKEEIELVRNFVLEKGGEKATFELARDFVKRAKESL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+S KK+L EV DF ++R
Sbjct: 301 EIFKESPLKKALFEVADFIVERT 323
>gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative
[Heliobacterium modesticaldum Ice1]
gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative
[Heliobacterium modesticaldum Ice1]
Length = 320
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 169/319 (52%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ KV + K + + + + +L+ +GGKRLRP L Y +
Sbjct: 4 QLFHEIQADLAKVEAELQKYVDTSLPTLTAASSHLLHAGGKRLRPAFVLLAGKFHNYALE 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA A+E IH ATL+HDDVVD+S RRG R WGN+ S+ GD L +++ ++
Sbjct: 64 RLLPLAVALELIHMATLVHDDVVDESKTRRGIPTVRARWGNRISLHTGDHLFARSLLLIS 123
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L+ ++ + EGE++Q+ + ++ T DYL+ IK KTA+L +A+ ++ ++
Sbjct: 124 ELNDPAMTAVLAKISVEMCEGEIQQMEATYDVHQTFRDYLYRIKRKTALLIAASCQLGAM 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
S +ALK YG +LG+AFQ+ DD+LD + E+GK IG D R G TLP++ A
Sbjct: 184 AVKADPSAVRALKMYGHHLGMAFQITDDILDMTADEKELGKPIGSDLRQGIMTLPILEAL 243
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ ++ + + S + + +A +++E A+ ++ A Y KAK+ L LP
Sbjct: 244 RESPDL---ALRTLVAKKEKSQDEVYRAIELIKETGAVERSQIIARRYLDKAKEELTRLP 300
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ +L + ++ +R
Sbjct: 301 AIPTRHTLAVIAEYIEKRT 319
>gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
Length = 323
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L G+
Sbjct: 6 ELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRGLSPEGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEAGTRRGVETVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA+GE++Q + T E YL KTA L + +
Sbjct: 126 HLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTGQTFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G ++L YG LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLSSGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + I + +L +A I+R++ A+ T A + Q+++++L
Sbjct: 246 YALEENPSLGV-----LIEREFSNEGDLDEALRIVRQSDAIARTRQLAERFAQESREALS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S + +L+E+ DF L RL
Sbjct: 301 WLPESPSRSALLELPDFVLSRL 322
>gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1]
gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae
SmR1]
Length = 309
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 139/311 (44%), Positives = 201/311 (64%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME VN +I +++ S+V ++ V +Y+I +GGKRLRP+L + A Y+G++H LA I
Sbjct: 1 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S+LRRGK A ++GN SVLVGDFL S+AF M++ + +E
Sbjct: 61 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ +AEGE+ QL N DV E YL VI+SKTA LF AA ++ +LIAG +
Sbjct: 121 IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A YG ++G AFQL+DDVLDY G E+GKN+G+D R GKPTLP+I Q GT +++
Sbjct: 181 EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ I +G ++ + + + AL T +A ++A D++ LPDS +KKSL+
Sbjct: 241 LVRTCIENG--DEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLL 298
Query: 312 EVVDFCLQRLN 322
E+ F + R +
Sbjct: 299 ELSAFAVDRNH 309
>gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) [Acinetobacter sp. ATCC 27244]
gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
19194]
gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) [Acinetobacter sp. ATCC 27244]
gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 347
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 182/321 (56%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 29 QDILSPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLTN 88
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF +
Sbjct: 89 MQQAQHLAAVIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARAFDL 148
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL D TEE YL++I KT+ LF A E +
Sbjct: 149 LVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEEIYLNIIHGKTSRLFELATEGA 208
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 209 AIL-AGTEEYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 267
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T + + +I G I E+L K I+ + L + RA A ++L+
Sbjct: 268 ALAHSTGEDHAIIRRSIATGGI--EHLDKVIEIVHHSGGLDYCQKRAQQETDAALEALKA 325
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++LM + L RL
Sbjct: 326 LPDNEYRQALMNLTLMALHRL 346
>gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
Length = 327
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 169/323 (52%), Gaps = 6/323 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
+++ ++ME + S V ++ + Y++ GK++RPM A ML
Sbjct: 6 QIKEPIREEMELFEQKFRNSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMLSDDSK 65
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 66 VSERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLL 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-E 178
+ I+ + L +S+ ++EGEL Q+ ++ LD+ E+ Y +I+ KTA L +A
Sbjct: 126 LSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEDVYYEIIRQKTATLIAACCAM 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + Q + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+
Sbjct: 186 GACSVQPEQPELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPL 243
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I T++EK + +++ + +K+ ++ + L + + QKA + L
Sbjct: 244 IYVLNTCTEKEKQWLINSVKKYNKDKKRVKEVISFVKTHNGLEYATAKMKEFQQKALNIL 303
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P SS+K++L +V++ + R
Sbjct: 304 NDFPASSYKEALTLMVNYVIDRK 326
>gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
Length = 345
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA L Y G+
Sbjct: 28 ALLAPVAADMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARALGYDGN 87
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++
Sbjct: 88 RHHELAAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMV 147
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ S +E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ ++
Sbjct: 148 DAGSMRIMEILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAV 207
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++G + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++
Sbjct: 208 LSGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLM 267
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT ++ + I G E+ F + + AL T A + A+ + R P
Sbjct: 268 EHGTAEQRQLARDAIVQGGT--EHFDAVFAAIHASGALEVTFEAARREAEAAEQAARQFP 325
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S+ K++L+++ F LQR +
Sbjct: 326 PSALKETLIQLCAFSLQRQS 345
>gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13]
Length = 320
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KM+ D++ + + I ++ ++ + +L+ +GGKR+RP+ L A + Y
Sbjct: 3 LKMMYSFLNNDLQIIENELEATIQTERALLQEASLHLLQAGGKRIRPVFVLLAAKLGAYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A A+E +H A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++ M
Sbjct: 63 IHKVKNVAVALELMHMASLVHDDVIDDAELRRGKSTIKAKWDNRIAMYTGDYIFARSLEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + EA LS L +GE+ Q+ N D YL IK KTA+L + + ++
Sbjct: 123 MTKVEDIEAHRILSNTLVELCKGEIEQIRDKYNYDQNLRTYLRRIKRKTAILIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +GV SV Q+L +G +G++FQ+ DD+LD+ ++GK G D G TLPV+
Sbjct: 183 AITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTSTEEQLGKPAGSDLLQGNITLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + +K+ +++ + A+ + + Y ++A L
Sbjct: 242 ---YAMESPPLNEKIRTIHEHSNSGEIKEIIELIKRSDAIDRSFALSDRYLERAFKELEK 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ K++ V + +R
Sbjct: 299 LPNGLAKRTFNNVAKYIGKRK 319
>gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
Length = 324
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +E+ + E+ N + S+ + + ++ S GK +RP+L L TA +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ +
Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G V + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++G + E + I + EN+ + N + E R Y KA D L L
Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S + SL+++ D+ + R
Sbjct: 304 PESEARTSLIQLADYIMTRS 323
>gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
Length = 324
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 165/319 (51%), Gaps = 2/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ +M+ ++ SDV ++ ++ Y++ GK+LRPM A + +
Sbjct: 7 EIQAPIAAEMDLFEQKFKGQMKSDVMLLDQIMNYIVKRKGKQLRPMFVFLMAGVCGSITE 66
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
A IE +HTATL+HDDVVD+S RRG + +W N+ +VLVGD+LLS+ + +
Sbjct: 67 ATYRGASLIELLHTATLVHDDVVDESNYRRGFFSINALWKNKVAVLVGDYLLSRGLLLSV 126
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L +S L+EGEL QL ++ LD+TE+ Y +I+ KTA L +A V +
Sbjct: 127 DNNDFDLLRIVSTAVRELSEGELLQLYKARRLDITEDIYYEIIRQKTASLIAACCAVGAR 186
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG+ V + ++G +GIAFQ+ DD+ D E+GK +G D + K TLP+I A
Sbjct: 187 SAGIDPQVVEKAHAFGEKVGIAFQIKDDLFD--YGTAEVGKPLGIDIKEKKMTLPLIYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ EK + I + + + + ++++ + Y +A+ L P
Sbjct: 245 NKAGYLEKRRIINIIKNESEKPKKVNEVIDFVKKSGGIEYATGAMNDYVAQAQALLNDFP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
DS ++ SL ++V + + R
Sbjct: 305 DSVYRSSLHKLVQYTIDRS 323
>gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
D13]
gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
D13]
Length = 324
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +E+ + E+ N + S+ + + ++ S GK +RP+L L TA +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ +
Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G V + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++G + E + I EN+ + N + E R Y KA D L L
Sbjct: 244 LRQGREEEAARYLDMILRKDFGAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S + SL+++ D+ + R
Sbjct: 304 PESEARTSLIQLADYIMTRS 323
>gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158]
Length = 324
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 135/322 (41%), Positives = 193/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + Y
Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF
Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA +
Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++
Sbjct: 183 SAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + GT + + +S I +G L+ M + +L T A KA +L
Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALA 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS W+ +L + +QR
Sbjct: 302 ALPDSPWRSALEALAHMSVQRT 323
>gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 322
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 165/318 (51%), Gaps = 2/318 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +EKV +++ I +++ ++ + +L+ +GGKRLRP L + D
Sbjct: 5 DLFRDIEPQLEKVEQELVRAITTEISLLKEASVHLVKAGGKRLRPAFVLLSGSFYSSSLD 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA A+E +H ATL+HDDV+D+S RRG+ + WGN+ S+ G+++L+++ ++
Sbjct: 65 GLIPLAVALELVHMATLVHDDVIDNSFTRRGQKTVKACWGNRVSLYSGNYILAKSLSLIA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + ++ L+ V+ + EGE+ Q+ ++ +DYL I+ KTA+L S + + +L
Sbjct: 125 AYERPDIIDILATVSMKVCEGEIIQMLSCFDVGQGYKDYLRRIERKTALLMSLSCQTGAL 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G L+ +G LG+AFQ+ DDVLD+ +GK +G D R G TLP + A
Sbjct: 185 VGGAPADKVTVLRRFGYYLGMAFQITDDVLDFVASEEVLGKPVGSDIRQGIITLPALYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ G S + + + A ++ + + A SY +KA+ L+ LP
Sbjct: 245 REGKDS--QLLASILCSPERCKNEAEDAIDMVLSSGGIDYALKVACSYAEKARSLLKSLP 302
Query: 303 DSSWKKSLMEVVDFCLQR 320
D + L + +F + R
Sbjct: 303 DVPARNVLDRIAEFVVTR 320
>gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum]
Length = 330
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 116/312 (37%), Positives = 186/312 (59%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+D+ V +++ + I +V ++I SGGKRLRP+L + + + Y G + LL+
Sbjct: 17 EQDLLAVENCLIEYGGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYSGPHISLLS 76
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+EFIHTATLLHDDVVD + +RRGK++A +WGNQT+VLVGD+L + A M + E
Sbjct: 77 AVVEFIHTATLLHDDVVDHAEMRRGKLSANQIWGNQTAVLVGDYLYATALWMATGVHNHE 136
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L+L ++EGE+ +L L NL EEDYL V++ KTA L + + +++ G
Sbjct: 137 INDTLTLACRKMSEGEVLELILDNNLSAREEDYLSVVECKTAALTAGTCRIGAILGGADT 196
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
++AL+ +G N+G++FQ+ DD LDY +GK +G+D GK TLP++ R T
Sbjct: 197 EKKKALEDFGYNIGMSFQIADDALDYMAREERLGKTLGKDLSEGKMTLPLLHCLSRATSA 256
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ I G ++ ++L + +M+ +L + +A S+ QKAK SL PDS K+
Sbjct: 257 QRESLVQKIGKGDVTEQHLHEVIELMKSTGSLEFSLEKAISFVQKAKASLEAFPDSLHKQ 316
Query: 309 SLMEVVDFCLQR 320
+L+ + DF ++R
Sbjct: 317 NLLFLSDFVIER 328
>gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 324
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 159/321 (49%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + KD+ + + + I D+ + D + +GGKR+RP+ L Y
Sbjct: 3 LLDIYSRKKKDIAFIEKSLERSIDVDLPTLRDASLLYLKAGGKRIRPVFVLLAGEFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DD+ RRGK R W N+ ++ GD++ ++A +
Sbjct: 63 LERMKHIAVPLELIHMASLVHDDVIDDAETRRGKATVRSKWDNRIAMYTGDYVYAKALTL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E K+ + +S ++ GE+ Q+ L T DYL IK KTA+L + + ++
Sbjct: 123 VTELKNPAIHQIMSKAMIEMSIGEMEQIRLFFEHGQTLRDYLRRIKRKTALLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A + + L +G +G+AFQ+ DD+LD G ++GK G D + G TLPV+
Sbjct: 183 AMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVGTEKQIGKPPGSDIKQGNITLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q R+ + ++ + ++RE+ + + A + QKA S+
Sbjct: 243 ALQEPKLRKPMLEELDRIRKADGQTDVSRFLNLVRESGGIEKADEIAETCIQKAIASIDP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD KK L+ + F +R
Sbjct: 303 LPDIQAKKDLVNIAYFIAKRS 323
>gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 324
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 109/324 (33%), Positives = 188/324 (58%), Gaps = 2/324 (0%)
Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK+ + ++ +++EK + + S+V ++ Y++ SGGKR+RP LT+ + ++E
Sbjct: 1 MKIFKPFEVIREELEKAEECSRELLNSNVRLVLTAGGYILDSGGKRVRPGLTIISGKLVE 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A +E++HTATLLHDD+VD + LRRG+++A V+GN +VLVGD++ ++A
Sbjct: 61 APLERLIPVATVMEYMHTATLLHDDIVDGAKLRRGRLSANEVFGNDVAVLVGDYMFAKAI 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ + L+ + +AEGEL QL ++++TEE+Y +I KTA L S E
Sbjct: 121 YILAVYGGDKVLKVAAQTVQEMAEGELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + R+ALK+YG +G AFQLVDD DY + +GK G D R GK T P+
Sbjct: 181 VGGIVGEAREEERKALKNYGKFIGYAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ T+ EK ++ + + E ++ E + +T A Y ++AK+ L
Sbjct: 241 LSALKKATESEKERISQVLSTVEPTKEQIESVRQFAFEKGGVEETIKLAREYVERAKEVL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
P+S +K+L E+ DF ++R +
Sbjct: 301 NVFPESPLRKALFEIADFIVERTS 324
>gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
Length = 324
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 157/319 (49%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D
Sbjct: 5 DIFGTLKKDMDVIEKELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDID 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A +
Sbjct: 65 KLKHVAVPLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALELTT 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K E + L+ ++ GE+ Q+ N + YL I+ KT++L + + ++ +L
Sbjct: 125 HLKQPEIHQILAKAMVEMSIGEMEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGAL 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A
Sbjct: 185 AADADRQVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ +RE + ++ A ++ + + E A Y KA +L LP
Sbjct: 245 KDSERREALLAELDRIHALNGQCDVSDAVKLVTSSEGIARAEALADRYIGKALAALDTLP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D KK L ++ +F +R
Sbjct: 305 DIRSKKQLRDIANFITKRS 323
>gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 357
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 135/316 (42%), Positives = 201/316 (63%), Gaps = 5/316 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +L DM +VN I+ R+ SDV +IP + +LI SGGKR+RP++TLA A +
Sbjct: 29 LTALVNLLADDMAQVNETIMARMTSDVPLIPQLAGHLITSGGKRMRPLMTLAGARIASPN 88
Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA A+EFIH+ATLLHDDV+D+S +RRG+ A +WGN SVLVGDFL ++
Sbjct: 89 TTSCSVAAIKLATAVEFIHSATLLHDDVIDESNMRRGQDTANALWGNDASVLVGDFLFAR 148
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
AF +++E+ + + L LS + + E E++Q++++ N D EDYL VI+ KTA+LF+AA
Sbjct: 149 AFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNPDTRLEDYLDVIEGKTAILFAAA 208
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ I+G + QA+ YG+NLG+AFQ++DD LDY + +MGKN G+DF + K T+
Sbjct: 209 AASGARISGADEQITQAMHMYGLNLGLAFQIMDDALDYTADSAQMGKNAGDDFLDQKITM 268
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVILA+Q+ E+ FW TI DG + E+ KA I+ ++A+ + A SY KAK
Sbjct: 269 PVILAYQKANDEERGFWHRTIGDGNFAAEDFAKAQSILSHHKAIEASLEAATSYANKAKA 328
Query: 297 SLRCLPDSSWKKSLME 312
+L D+ + L +
Sbjct: 329 ALAIF-DAPDQAELAQ 343
>gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
Length = 324
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 171/322 (53%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + ++E + S ++ V +Y++ GK++RP L L +A +
Sbjct: 3 IKDVTASVADEIELFQQKYKAVLHSSNTLVDKVTRYVLRQQGKQIRPALVLLSAKICGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 TEVTYRAAIMVELLHSATLIHDDVVDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ K +L +S ++EGE+ Q+ +++LD++EEDY+ VI KTA L +++ +
Sbjct: 123 SLDHKDYASLHTVSDAVRRMSEGEILQIQKTRSLDISEEDYISVISDKTASLIASSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A +++ +K YG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I
Sbjct: 183 AASATDDDTMIAGMKRYGEYLGLAFQIRDDLLDYTGDSKKTGKQMGIDIKDKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ E+ +S + K + + L A + +A S+
Sbjct: 243 ALRQAPASEQKMIRSILKSSKKRAVKSDEVIDFVTRKGGLEYAAEIAEGFAAQAVASITP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+ K SL+ +VDF ++R +
Sbjct: 303 FPECGAKTSLLHLVDFVMKRQH 324
>gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus
pseudofirmus OF4]
gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus pseudofirmus OF4]
Length = 323
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 155/321 (48%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+ + + + + +++ + +L+ +GGKR+RP+ L A Y
Sbjct: 3 LADIYMQFQSDITIIEQELEASVQARHDVLKNASTHLLKAGGKRIRPVFVLLAAKFGTYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A +E +H A+L+HDDV+DD+ LRRGK + W N+ ++ G+++ ++A
Sbjct: 63 IHVLKNIAVPLELVHMASLVHDDVIDDAELRRGKRTVKSQWDNKVAMYTGNYIFAKAVEA 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ LS + GE+ Q+ N YL IK KTA+L + + E+
Sbjct: 123 SAYFDHPRVHQVLSNTLVEMCIGEVEQIRDQYNWGQNLRVYLRRIKRKTALLIAVSCELG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A +++ L ++G N+G++FQ+ DD+LD+ G ++GK G D R G TLP +
Sbjct: 183 ALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVGTEKQLGKPAGGDLRQGNVTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + N+ ++ +++ ++E+ + + + + +A DSL
Sbjct: 243 AMHHDEEISHLIKNMLKNEFPENI-DMQPILKAVKESGGIDYSIKMSDRFLHRAYDSLER 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K L E+ + +R
Sbjct: 302 LPDCEAKNYLKEIAAYIGKRK 322
>gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
Length = 328
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 135/320 (42%), Positives = 192/320 (60%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA + Y G+
Sbjct: 11 ALLAPVAADMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARAMGYDGN 70
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++
Sbjct: 71 RHHELAAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMV 130
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ S +E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ ++
Sbjct: 131 DAGSMRIMEILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAV 190
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++
Sbjct: 191 LAGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLL 250
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT ++ + I G E+ F + + AL T A + A+ + R P
Sbjct: 251 EHGTPEQRQLARDAIVRGGT--EHFDAVFAAIHASGALDVTFEAARREAEAAEQAARQFP 308
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S K++L+++ F LQR +
Sbjct: 309 PSELKETLIQLCAFSLQRQS 328
>gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. AM4]
gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. AM4]
Length = 343
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 18/337 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
K L + V+ +IL+ + + + ++ +GGKR+RP + L A +
Sbjct: 5 KELFTRIKNLAKDVDKIILELVPEKDPKKLYEAARHYPLAGGKRVRPFVVLRAAEAVGGD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A A+EFIH +L+HDD++D LRRG+ VWG ++L GD L S+AF
Sbjct: 65 PEKALYPAAAVEFIHNYSLVHDDIMDMDELRRGRPTVHKVWGVNMAILAGDLLFSKAFEA 124
Query: 121 VIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + + +A + L EG+ + +VT ++YL +I KT LF
Sbjct: 125 IAKAEVSPEKKARILEVLVKTSNELCEGQALDIEFETKDEVTVDEYLKMISGKTGALFDG 184
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +++ +AL +G N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 185 SATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 244
Query: 236 LPVILAFQRGTKREKNFWKSTIND------------GKISVENLKKAFIIMRENRALVDT 283
L V FQ ++ +K + + E + KA ++++ ++
Sbjct: 245 LIVSHFFQHASEEDKAEFLKVFGKYAGDAKGDALIHDEKVKEEVAKAIELLKKYGSIDYA 304
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++A ++L+ LP+S +K L + +F ++R
Sbjct: 305 ANYAKNLVKEANEALKILPESEARKDLELLAEFLVER 341
>gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
Length = 332
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 127/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML +
Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I
Sbjct: 193 ALASGADADVQQRLYDYGMQLGFAFQIADDVLDYAAEAEDLGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + ++ + G + + + L + RA Y A+ +L
Sbjct: 253 AMAHSDEATRQRLRAIVEQG--DAAAMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALAT 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP S +L + + +QR +
Sbjct: 311 LPASPAVAALRGLARYAVQRTH 332
>gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium]
Length = 328
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 175/321 (54%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ K+M++ + + + S V ++ + Y+I GK +RP+LT +A +L
Sbjct: 8 ISIIKAPIEKEMKQFDSYFKESMKSKVRLLDIINNYIIKRKGKEVRPILTFLSARLLGDI 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ + A + +HTATL+HDDVVD++ RRG + +W ++ +VLVGD+LLS+ +
Sbjct: 68 QESTYVAAALTQLLHTATLIHDDVVDEAYERRGFFSINALWKSKAAVLVGDYLLSKGLLV 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E K + L+ +S ++EGEL QL S+ LD+TE+ Y +I KTA L ++ ++
Sbjct: 128 ALENKEYDQLQVVSDAVREMSEGELLQLEKSRKLDITEDVYFDIIYKKTASLIASCTQLG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G ++ LK +G LG+AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 188 ALSVGATKDQQEKLKRFGECLGVAFQMKDDLFDYEK-QGNIGKPTGNDIKEKKLTLPLIY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + +E+ + I + E + + ++E + T + Y QK+ + L
Sbjct: 247 VLRNVSDKERKWALKIIRKHNKNSEKVNELIQFVKEKGGIDYTRDKMLEYKQKSLEILSN 306
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+S SL E+V++ + R
Sbjct: 307 FPESEANTSLKELVEYTISRT 327
>gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
DSM 319]
gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
DSM 319]
Length = 321
Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 168/321 (52%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KM+ D+ + + + + +D +I D +L+ +GGKR+RP+ L A Y
Sbjct: 3 LKMMYAFLNTDITLIEKELEQTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A +
Sbjct: 63 IDQIKHVAVALELIHMASLVHDDVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEV 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E K EA + LS L GE+ Q+ NL+ YL IK KTA+L +A+ ++
Sbjct: 123 MSEVKDVEAHKILSNTMVELTLGEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG + + L +G +G++FQ+ DD+LD+ ++GK +G D G TLPV+
Sbjct: 183 AIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + R+K + + E + + ++ + A+ + + Y QKA L
Sbjct: 243 AIENAEFRDKVEQLF---EREYEQELINEIISDIKSSNAIERSFEMSDRYLQKAMSILEE 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + KK+L ++ + +R
Sbjct: 300 LPPNKAKKTLHQIAKYIGKRK 320
>gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Limnobacter sp. MED105]
gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Limnobacter sp. MED105]
Length = 330
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 121/323 (37%), Positives = 186/323 (57%), Gaps = 5/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+K + DM++++ +I + S+V +I + Y+I +GGKRLRP L + TA L
Sbjct: 8 VKSVLSPIAADMQQLDQVIRTSLHSEVSLINQISDYIINAGGKRLRPALVILTARALGAT 67
Query: 60 --RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + LA +EFIHTATLLHDDVVD+S +RRG++ A +GN +VLVGDFL S++
Sbjct: 68 QQQMQQTIELAAIVEFIHTATLLHDDVVDESDMRRGRLTANAEYGNSAAVLVGDFLYSRS 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F M+++ + ++ LS T+AEGE+ QL K+ DVTE Y+ VI KTA LF A+
Sbjct: 128 FQMMVKIGLMDVMDVLSEATNTIAEGEVLQLLNCKDPDVTEARYMQVIDFKTAKLFEASC 187
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++ G L +G +G AFQL+DDVLDY GE +GKN+G+D R GKPTLP
Sbjct: 188 RLAGIVTGQSKEAITNLGRFGAEVGSAFQLIDDVLDYAGESAALGKNVGDDLREGKPTLP 247
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+I A Q + +N + I +G +++ + + +L T +A + AK
Sbjct: 248 LIHAMQHAKPQVQNQIRDAIANGGT--QDVSVIMASIEQTGSLAYTRNKAQALADSAKTR 305
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L L + + ++L + D + R
Sbjct: 306 LGSLTSNPYTEALAVLCDVAVNR 328
>gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKGKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + E L+ +++ A+ + + Y QKA + L L
Sbjct: 270 --YALENPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 328 PRGRARSSLAAIAKYIGKRK 347
>gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II
'5-way CG']
Length = 330
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 115/312 (36%), Positives = 188/312 (60%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+D+ V +++ + I +V ++I SGGKRLRP+L + + + Y G + LL+
Sbjct: 17 EQDLLAVENCLIEFGGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYSGPHISLLS 76
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+EFIHTATLLHDDVVD + +RRGK++A +WGNQT+VLVGD+L + A M + E
Sbjct: 77 AVVEFIHTATLLHDDVVDHAEMRRGKLSANQIWGNQTAVLVGDYLYATALWMATGVHNHE 136
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L+L ++EGE+ +L L NL EEDYL+V++ KTA L + + +++ G
Sbjct: 137 INDTLTLACRKMSEGEVLELILDNNLSAREEDYLNVVECKTAALTAGTCRIGAILGGADP 196
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+++L+ +G N+G++FQ+ DD LDY +GK +G+D GK TLP++ R T
Sbjct: 197 EKKKSLEDFGYNIGMSFQIADDALDYMAREERLGKTLGKDLSEGKMTLPLLHCLSRATST 256
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ I G ++ ++L++ +M+ +L + +A S+ QKAK SL PDS K+
Sbjct: 257 QRESLVQKIGKGDVTKQHLREVVDLMKSTGSLEFSLEKAISFMQKAKASLEAFPDSLHKQ 316
Query: 309 SLMEVVDFCLQR 320
+L+ + DF ++R
Sbjct: 317 NLLFLSDFVIER 328
>gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
1942]
gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
1942]
Length = 320
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 161/320 (50%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + Y
Sbjct: 4 KMAYSFLNDDIDIIEKELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGNYDI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTAILIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G V +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 184 IASGADEKVHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNITLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + E L +++ A+ + + Y +KA L L
Sbjct: 242 --YALEHPGLRNQLKLINSETTQEQLNPIIEEIKKTNAIKKSMDVSEMYLEKAFQKLNTL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 300 PRGRARSSLASIAKYIGKRK 319
>gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + E L+ +++ A+ + + Y QKA + L L
Sbjct: 270 --YALENPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 328 PRGRARSSLAAIAKYIGKRK 347
>gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
ATCC 7061]
gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
ATCC 7061]
Length = 320
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 165/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 3 LKAMISFLNHDIDIIEKELEQTVRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++
Sbjct: 63 INKIKYVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + A E LS + L GE+ Q+ N+D YL IK KTA+L + + ++
Sbjct: 123 MTKINHPMAHEILSKMVVELCLGEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG +AL +G +G+++Q++DDVLD+ E+GK +G D G TLPV+
Sbjct: 183 AIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
K + + + + + LK +++ A+ + + Y +KA + L
Sbjct: 242 ---YALKNPTLEGQLKLINSETTETQLKPVIEHLKQTDAIDRSIRVSEMYLKKAFEQLDK 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K SL + + +R
Sbjct: 299 LPRGRAKTSLASIAKYIGKRK 319
>gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 323
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 167/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L G+
Sbjct: 6 ELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALSADGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVETVHSRFNYRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA+GE++Q + + E YL KTA L + + +
Sbjct: 126 HLANLDNLDVVKLLSRVIMDLADGEVKQGLFRFDTGQSFETYLEKSYCKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ ++L YG LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGLSEPQLESLYHYGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLSSGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ I +L+ A ++RE+ A+ T A ++ ++A++SL
Sbjct: 246 YAL-----EERPALSGLIEREFSGDGDLETALALVRESEAIPRTRELAKTFAREARESLD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S + +L+E+ DF L RL
Sbjct: 301 WLPESPSRTALLELPDFVLSRL 322
>gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + E L+ +++ A+ + + Y QKA + L L
Sbjct: 270 --YALENPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 328 PRGRARSSLAAIAKYIGKRK 347
>gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
NA1000]
Length = 322
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 151/320 (47%), Positives = 210/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A +
Sbjct: 1 MDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +
Sbjct: 61 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E
Sbjct: 121 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L
Sbjct: 181 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L
Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + W+++L E+ DF + R
Sbjct: 301 FPANDWREALEELADFAVSR 320
>gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
QM B1551]
gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
QM B1551]
Length = 321
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 167/321 (52%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KM+ D+ + + + + +D +I D +L+ +GGKR+RP+ L A Y
Sbjct: 3 LKMMYAFLNTDITLIEKELEQTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A +
Sbjct: 63 IDQIKHVAVALELIHMASLVHDDVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEV 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E K EA + LS L GE+ Q+ NL+ YL IK KTA+L +A+ ++
Sbjct: 123 MSEVKDVEAHKILSNTMVELTLGEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG + + L +G +G++FQ+ DD+LD+ ++GK +G D G TLPV+
Sbjct: 183 AIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + R+K + E + + ++ + A+ + + Y QKA L
Sbjct: 243 AIENAEFRDKVEQLF---ERGYEQELINEIISDIKSSNAIERSFEMSDRYLQKAMSILEE 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + KK+L ++ + +R
Sbjct: 300 LPPNKAKKTLHQIAKYIGKRK 320
>gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 320
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + E L+ +++ A+ + + Y QKA + L L
Sbjct: 242 --YALENPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 300 PRGRARSSLAAIAKYIGKRK 319
>gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
Length = 321
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y
Sbjct: 3 LPALIAPITDDMKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S ++ LS +AEGE+ QL + +V++E YL V++ KTA LF AA +V
Sbjct: 123 MVEANSMRIMQILSEATTVIAEGEVLQLLNVHDPEVSQERYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG ++G AFQL+DDVLDY G+ +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGATPEQEAAAAAYGRHIGTAFQLIDDVLDYSGDALALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G+ ++ + I G+ +R+ AL A QKA+D+L C
Sbjct: 243 VMEVGSPEQQALIRQAIETGQADF---AAVAAAIRDTDALAHARRAAEVEAQKARDALSC 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S ++KSL+E F ++R
Sbjct: 300 YPASIFQKSLLEFCAFAVER 319
>gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 324
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 119/319 (37%), Positives = 187/319 (58%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +VN ++ + + S+V +I + Y+I +GGKRLRP++T+ L Y GD
Sbjct: 8 FQKNLATDLGRVNQVVGRAVQSEVALISQIGSYIIGAGGKRLRPIITILAGKSLGYDGDP 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S +RRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESDMRRGRETANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N D++E +YL VI+ KTA LF AA +V +++
Sbjct: 128 SGSMKILEVMADATNIIAEGEVMQLMNIGNTDISETEYLRVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG AL+ YGM +G AFQ+VDD+LDY G+ E+GKN+G+D GKPTLP+I
Sbjct: 188 AGASAEQEAALRDYGMYVGTAFQIVDDILDYCGDPAEIGKNVGDDLAEGKPTLPLIYLMH 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+GT + ++ S ++ + + AL +A A L LP
Sbjct: 248 QGTPEAARDVRDALHHADRS--RFEQIHAHVTASDALAYCARQARIAVDNALSCLDKLPA 305
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ ++ ++ + L R++
Sbjct: 306 NETTLAMRQLAEESLARVS 324
>gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51]
gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 322
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 182/323 (56%), Gaps = 4/323 (1%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L + D+++V + I +D ++ L+ +GGKRLRP TL
Sbjct: 1 MKQLWLFNQINSDLQRVEKELHAYIKTDFPILDQSAVQLLEAGGKRLRPAFTLLAGKFYG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
Y D + +A A+E IH ATL+HDDVVD S RRG+ + WGN S+ GD+LL++A
Sbjct: 61 YPIDRLLPVAMALELIHMATLVHDDVVDASMTRRGRPTVKAKWGNVVSIATGDYLLAKAL 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ + E + L+ V+ +++GE++Q+ S +++ + Y + IK KTA+L SA+ +
Sbjct: 121 ELLAQINHPEVSKILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYRIKRKTAMLISASCK 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L++ AL +YG LG+AFQ+VDDVLD E +E+GK +G D R G TLP+
Sbjct: 181 LGALVSAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGKPVGGDIRQGIMTLPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
ILA + +R + + +++++A +++++ A+ D+ + Y KA L
Sbjct: 241 ILALHQSGER--ERLHELLVKPEKDEDDVREAIKMIKDSGAIADSMHYVDLYISKANSYL 298
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ LP+ +K+L+++ F +R
Sbjct: 299 QELPNVPTRKALVDLAYFVKERK 321
>gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II
[Paenibacillus sp. HGF5]
gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II
[Paenibacillus sp. HGF5]
Length = 324
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 158/319 (49%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D
Sbjct: 5 DIFGTLKKDMDVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDID 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A +
Sbjct: 65 KLKHVAVPLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTT 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K E + L+ ++ GE+ Q+ N + YL I+ KT++L + + ++ +L
Sbjct: 125 HLKQPEIHQILAKAMVEMSIGEMEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGAL 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A
Sbjct: 185 AADADRKVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ +RE + ++ A ++ + + +E A Y KA +L LP
Sbjct: 245 EDSQRREPLLQELERIHALNGQCDVSGAVKLVTSSEGISRSEALADRYIGKALAALDTLP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D KK L ++ +F +R
Sbjct: 305 DIKTKKQLRDIANFITKRS 323
>gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34]
gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34]
Length = 325
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G
Sbjct: 8 ALLAPVAADMRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGH 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++
Sbjct: 68 RHHELAAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMV 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E S +E LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ ++
Sbjct: 128 EAGSMRIMEILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAV 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++
Sbjct: 188 LAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLL 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT +++ + I G E+ F + + AL T A + A+ + P
Sbjct: 248 EHGTAQQRELARDAIVQGGT--EHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFP 305
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS K++L+++ F LQR +
Sbjct: 306 DSPLKQTLIDLCAFSLQRQS 325
>gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
AA4]
gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
AA4]
Length = 347
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + V ++ + SDV + D +L+ +GGKR RP+ TL +A +G
Sbjct: 30 EPLLRAIASGLADVETMLRDVVKSDVPAVHDAALHLVEAGGKRFRPLFTLLSAQFGPKQG 89
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ ++ A A+E +H ATL HDDV+D++ +RRG + W N ++L GD+L + A +V
Sbjct: 90 EQVLVAAAAVELVHLATLYHDDVMDEATMRRGAESVNSRWDNTVAILTGDYLFAHASRLV 149
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A ++ L G++R+ D E YL VI KT L + +
Sbjct: 150 A-DLGTDAARIIAETFGELVSGQMRETVGPGPGDDPVEHYLTVIAQKTGSLIATSGRFGG 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G QAL+ +G +G AFQ+ DDV+D E+GK G D R G TLP++ A
Sbjct: 209 MMSGAAEEHIQALRRFGDIIGAAFQISDDVIDIASPSVELGKAQGTDLREGVRTLPMLYA 268
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +A ++R + L Y +A+ L L
Sbjct: 269 --LADPGTDPRLVELLAGPITDDALVAEALELLRRSSGLERARETLSDYASRARAELASL 326
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P S + + V D+ + R
Sbjct: 327 PASPARDACESVADYLVART 346
>gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 322
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 182/323 (56%), Gaps = 4/323 (1%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L + D+++V + I +D ++ L+ +GGKRLRP TL
Sbjct: 1 MKQLWLFNQINSDLQRVEKELHAYIKTDFPILDQSAVQLLEAGGKRLRPAFTLLAGKFYG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
Y D + +A A+E IH ATL+HDDVVD S RRG+ + WGN S+ GD+LL++A
Sbjct: 61 YPIDRLLPVAMALELIHMATLVHDDVVDASMTRRGRPTVKAKWGNVVSIATGDYLLAKAL 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ + E + L+ V+ +++GE++Q+ S +++ + Y + IK KTA+L SA+ +
Sbjct: 121 ELLAQINHPEVSKILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYRIKRKTAMLISASCK 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +LI+ AL +YG LG+AFQ+VDDVLD E +E+GK +G D R G TLP+
Sbjct: 181 LGALISAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGKPVGGDIRQGIMTLPL 240
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
ILA + +R + + +++++A +++++ A+ D+ + Y KA L
Sbjct: 241 ILALHQSGER--ERLHELLVKPEKDEDDVREAIKMIKDSGAIADSMHYVDLYISKANSYL 298
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ LP+ +K+L+++ F +R
Sbjct: 299 QELPNVPTRKALVDLAYFVKERK 321
>gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2;
Short=HEPPP synthase subunit 2; AltName: Full=Spore
germination protein C3
gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis]
gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. SMY]
Length = 348
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/320 (26%), Positives = 163/320 (50%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
K + + + + + E L+ +++ A+ + + Y QKA L L
Sbjct: 270 --YALKNPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTL 327
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 328 PRGRARSSLAAIAKYIGKRK 347
>gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
Length = 322
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +
Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGKH 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 66 HHELAAVVEFIHTATLLHDDVVDESELRRGRRTANAVFGNAASVLVGDFLYSRAFQMMVQ 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 126 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 186 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLS 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A +++ LP
Sbjct: 246 HGTEEQRALARQAIEQGGT--EHFDAIFAAIQASGALEYTRKTAEREASAAAEAINALPP 303
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S + ++L+++ F LQR +
Sbjct: 304 SLFLQTLIDLCAFSLQRQS 322
>gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
Length = 355
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ + D++ + + SD ++ V +Y+++ GKR+RP+L L +A
Sbjct: 35 LDDIRVPVEDDLDAFRSYFREAMRSDHMLLDKVTQYVLWQKGKRIRPILVLLSAQACGGA 94
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A +E +HTATL+HDDVVDD+ RRG + +W N+ +VL+GDFLLS+
Sbjct: 95 ATDQTHRAAALVELLHTATLVHDDVVDDAEERRGVFSINALWKNKIAVLLGDFLLSRGLL 154
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ L LS ++EGEL Q+ S+ LD+ EE Y +I KTA L SA +
Sbjct: 155 LSLDHDDYSVLHTLSDAVRRMSEGELLQIEKSRLLDIDEETYFRIISDKTASLISACTKS 214
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ ++ + + +G LG+AFQ+ DD+ D + GK IG D + K TLP+I
Sbjct: 215 GAVSVTDDEALIERMDEFGETLGLAFQIRDDLFD--FSAEDAGKPIGIDLQEKKMTLPLI 272
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+A + +REK + ++ + ++L+ + E + + S A+ L
Sbjct: 273 VALREAGRREKKRILAIVDQDEKDRDDLRTIADFVDEYGGIEHARRKMESLAADARSLLS 332
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S + SL + +F +QR
Sbjct: 333 ALPPSEARASLAGLTEFAIQRS 354
>gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
BSn5]
gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. natto BEST195]
gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
BSn5]
Length = 320
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/320 (26%), Positives = 163/320 (50%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
K + + + + + E L+ +++ A+ + + Y QKA L L
Sbjct: 242 --YALKNPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 300 PRGRARSSLAAIAKYIGKRK 319
>gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
Length = 324
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 158/319 (49%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D
Sbjct: 5 DIFGTLKKDMDVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDID 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A +
Sbjct: 65 KLKHVAVPLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTT 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K E + L+ ++ GE+ Q+ N + YL I+ KT++L + + ++ +L
Sbjct: 125 HLKQPEIHQILAKAMVEMSIGEMEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGAL 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A
Sbjct: 185 AADADRKVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ +RE + ++ A ++ + + +E A Y KA +L LP
Sbjct: 245 EDSQRREPLLQELERIHALNGQCDVSGAVKLVTSSEGISRSEALADRYIGKALAALDTLP 304
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D KK L ++ +F +R
Sbjct: 305 DIKTKKQLKDIANFITKRS 323
>gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 324
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 170/321 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++E + S+V ++ V Y++ GK++RP L L +A ++
Sbjct: 3 INEVIRPVKSELELFRTKFKDAMASEVGLLNKVASYILKQKGKQIRPALVLLSAKLVGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTATL+HDDVVD + +RRG A +W N+ +VL+GD+LL++ +
Sbjct: 63 NEGTYRAAALVELLHTATLVHDDVVDTADMRRGLPAVNALWKNKVAVLMGDYLLARGLLL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L +S ++EGEL Q+ +++LD+ EE Y +I KTA L S A E+
Sbjct: 123 ALQNGDTLFLNIVSDAVRRMSEGELLQIEKTRHLDIDEETYFKIISDKTASLISTACELG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A VRQ+L+ G LG+AFQ+ DD+LDY+G+ GK IG D + K TLP+I
Sbjct: 183 AASASTDEKVRQSLRDCGEALGLAFQIRDDILDYQGDTKNTGKPIGGDIKEKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + ++ S + K + EN + + A Y KA ++++
Sbjct: 243 SLNKVGEEKRKEIISILKSDKKRALFSNDIINFVVENGGIEYADKVAKDYANKALEAIQD 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD KKS+ +V+F ++R
Sbjct: 303 LPDCESKKSIDLLVEFVIKRK 323
>gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
Length = 287
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 118/286 (41%), Positives = 176/286 (61%), Gaps = 1/286 (0%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
Y++ GGKRLRP+L + +A L Y+G+ H + A IEFIHTATLLHDDVVD+S +RRGK
Sbjct: 2 YIVSGGGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKA 61
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D
Sbjct: 62 TANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPD 121
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
TEE Y+ VI SKTA LF +A ++ +++ V A+++YG LG AFQL+DDV+DY
Sbjct: 122 TTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYT 181
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ +MGKN+G+D GKPTLP++ A + T + I ++ L+ +M+
Sbjct: 182 SDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPDNALMIREAIEKAN-GMDRLEDILAVMK 240
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
E +L T +A KA + L LP+S +K++L+ + +QR
Sbjct: 241 EAGSLEYTTQKALEEADKAIEELSVLPESEYKQALITLAHVAVQRT 286
>gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 327
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 179/317 (56%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ DME + + + + + ++ +++F+GGKR+RP+L + A + Y G +
Sbjct: 9 IFSRVAGDMEAIETALADNLTPYFDKVREIAGHILFTGGKRVRPLLMVLCARLCRYDGSD 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
++ E++HTATLLHDD+VD +A+RRG AA +VW ++VLVGDFLL+++ + ++
Sbjct: 69 DKRVSVMFEYLHTATLLHDDIVDGAAMRRGSPAAHVVWDPASAVLVGDFLLARSASIAVD 128
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T ++ L+ + +++GE+ QL+ N++++E +Y +I KTAVL A +++
Sbjct: 129 TGRIALMKILADILEDMSQGEIHQLARKGNVNLSEAEYRTIILHKTAVLMEGACRSGAIL 188
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ +AL YG NLG+AFQ++DD+LDY + +GK +G D R GK TLP+I A
Sbjct: 189 AGASDAHARALADYGRNLGMAFQMIDDLLDYTADTQVLGKAVGADLREGKFTLPLIHALG 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
R + K + + ++ + ++ + T A ++ Q+A+ +L
Sbjct: 249 RADAGDAETIKRIMGNPDVTDAAFETLKRLLETYDGIGYTRRCAEAHIQEARSALDMFEP 308
Query: 304 SSWKKSLMEVVDFCLQR 320
S + L ++ D+ + R
Sbjct: 309 SETRTLLEKLADYTILR 325
>gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
SH205]
gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
SH205]
Length = 325
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 116/321 (36%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YR 60
+ + D +++LI + I S V ++ V K+++ +GGKR+RP++ L A
Sbjct: 7 QDVLSPVATDFAAMDYLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAAKACGLVN 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL++++F +
Sbjct: 67 MQQAQHLAAIIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARSFDL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ + L+ S C +AEGE+ QL + TEE YL +I KT+ LF A E +
Sbjct: 127 LVDLNNITLLKDFSTGTCEIAEGEVLQLQSQHQPETTEETYLRIIHGKTSRLFELATEGA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I
Sbjct: 187 AIL-AGTEEYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLIS 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T E + +I G I E+L K I+ + A+ + RA A ++L+
Sbjct: 246 ALAHSTGEEHEIIRRSIATGGI--EHLDKVIQIVHNSGAIEYCQKRAQQETDGALEALKA 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++++L+ + L RL
Sbjct: 304 LPDNEYRQALINLTLMALHRL 324
>gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
KSM-K16]
gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
KSM-K16]
Length = 323
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+E + + + + + ++ + L+ +GGKR+RP+L L +Y+
Sbjct: 3 LADIYKAFQGDIEFIEAELERTLSAKHPVLKEASTGLLKAGGKRIRPVLVLLAGKFGDYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH +L+HDDV+D++ LRRG+ W N+ ++ GD++ A
Sbjct: 63 LDRLKHIAVTLELIHMGSLVHDDVIDNAPLRRGRETVMSRWDNRVAMYTGDYIFGHAIET 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S V + GE+ Q+ N D YL IK KTA+L + + ++
Sbjct: 123 TKAFSDKRVHTIISDVMNQICRGEIEQIRDQYNWDQGLRIYLRRIKRKTALLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + +++ L + LG+++Q++DD+LD+ G ++GK G D R G TLP +
Sbjct: 183 AIVSGATDELQKNLYYFAYFLGMSYQIMDDILDFVGTNEQLGKPAGGDLRQGNVTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ KS + + +++ +R + + + + Y KA L
Sbjct: 243 AIEHTPGFKQRLEKSLTKESSL-EMDMEPLLNEVRTSGGIEYAQAMSDRYLHKANTLLMG 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PD K+ L+EV + +R
Sbjct: 302 FPDIDAKRHLIEVASYIGRRK 322
>gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
Length = 329
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 183/319 (57%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DME VN +I +++ S+V I + +YLI +GGKR+RP L L A Y+G
Sbjct: 11 DSFLSTIAPDMEGVNRIIREQLHSNVPFISQIAEYLINAGGKRIRPALVLLMARAFGYQG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H +LA IEFIHTATLLHDDVVD++ LRRGK +A ++GN SVLVGDFL ++AF M+
Sbjct: 71 TQHQMLAAMIEFIHTATLLHDDVVDEADLRRGKSSANALFGNAASVLVGDFLYTRAFQMI 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L LS +AEGE+ QL +N + E+ Y+ VI +KTA LF + + +
Sbjct: 131 VAVNDMRILPVLSDATNLIAEGEVMQLVNVRNPAIDEKRYMEVIYAKTARLFEVSAVLGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LIA +A +YG +LGIAFQLVDD+LDY GE + +GK +G D R GK TLP+I
Sbjct: 191 LIAHASEKEIEAAAAYGRSLGIAFQLVDDLLDYAGETDVLGKTVGNDLREGKMTLPLIFL 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + I + +L ++ + AL T +A A +L CL
Sbjct: 251 MSHCDESIRKTIRECIENH--DEASLPFILEAVKASDALDYTARKAQDAANDAAQALSCL 308
Query: 302 PDSSWKKSLMEVVDFCLQR 320
DS +K++L+++ F +R
Sbjct: 309 RDSQYKETLIKLSTFSAER 327
>gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299]
gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299]
Length = 452
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + DME++ IL + ++ + +GGKRLRP+L A
Sbjct: 131 IDDIIAPVKSDMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQL 190
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ + LA E IHTA+L+HDDV+DD RRG ++G + ++L GDFL
Sbjct: 191 MSMDDITERQRRLAEITEMIHTASLVHDDVLDDCDTRRGAETIHTLYGTRVAILAGDFLF 250
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A+GE+ Q N DVT E YL +KTA L +
Sbjct: 251 AQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEGYLEKSHNKTASLIA 310
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V V+ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G
Sbjct: 311 ASCKSAAVFSEVSEDVKMDMYEYGKHLGLAFQIVDDILDFTQSEAQLGKPKGQDLASGNL 370
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P I A + I + E+L +A I+ E+ + D A A
Sbjct: 371 TAPCIFAL-----GRNPRLRELIETQFANPEDLAEAIEIVNESG-IEDARRLAREEADMA 424
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+ LP+ K SL+++V + L+RL
Sbjct: 425 LAALKGLPEGKAKTSLVDMVGYVLERL 451
>gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
nagariensis]
gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
nagariensis]
Length = 389
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 170/327 (51%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA------ 54
+ + DME++N + + + M+ + + +GGK+LRP++ A
Sbjct: 67 LNEILAPVKSDMEQMNQNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHSTAQR 126
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L D H LA E IHTA+L+HDDV+D+ +RRGK ++G + +VL GDFL
Sbjct: 127 EGLTELTDKHRRLAEITEMIHTASLVHDDVLDECDIRRGKKTINSMYGTRVAVLAGDFLF 186
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE+ Q + + D+T E YL KTA L +
Sbjct: 187 AQSSWFLANLDNLEVIKLISQVIADFANGEISQAASLFDTDITLEQYLDKSFYKTASLIA 246
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ + V++A+ SYG +LG+AFQ+VDDVLD+ ++GK G+D +G
Sbjct: 247 ASCRSAAVFSDSPVEVKEAMYSYGKHLGLAFQVVDDVLDFTQSTEQLGKPQGQDLASGNL 306
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P I A ++ + I+ + +L++A ++RE + + A A
Sbjct: 307 TAPAIFALRKSPELLD-----IISSEFVEEGSLERALELVRETGGIEEARLLARQQADMA 361
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP+ ++SL +VD+ L+R+
Sbjct: 362 LAALECLPEGPSRRSLRLMVDYVLERI 388
>gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens TA208]
Length = 320
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 163/320 (50%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLADSLEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 124 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + + + E L ++ A+ + + Y +KA + L L
Sbjct: 242 --YALHQPELRNQLKLINSETTQEQLAPIIENIKRTDAIEKSMAVSDRYLKKAFEKLNTL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 300 PRGRARSSLAAIAKYIGKRK 319
>gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
Length = 323
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 161/323 (49%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ + + K I + ++ ++L + GKR+RP + L A + +
Sbjct: 6 SLFSPVEADLRLLTENLKKLIGARHPVLYAAAEHLFGAEGKRIRPAIVLLLARAISPSQE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L HDDVVD S LRRG ++GN+ ++ GDFL +QA
Sbjct: 66 ISSRHRRLAEITEMIHTASLFHDDVVDQSDLRRGLPTVHSLFGNRIAIQAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V AEGE++Q + +T YL KTA L + + +
Sbjct: 126 YLADLDNLTVVKLLSQVIKDFAEGEIQQGFNRFDTSLTMAAYLDKTYYKTASLIANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++G+ Q+L YG ++G+AFQ+VDD+LD+ +++GK G D ++G T P +
Sbjct: 186 VGVLSGISAQSSQSLYEYGRHVGLAFQIVDDILDFTRSTDDLGKPAGSDLKDGTLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ + K I +L+ A +++ +R + A Y A L
Sbjct: 246 YAL-----EEQPYLKVLIEREFRETGDLEAAIALVQNSRGIERARQLAEKYAHTAVQYLA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP+S +++L + ++ L+RL+
Sbjct: 301 DLPESDAQQALTHLTEYILKRLH 323
>gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
Length = 320
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 119/305 (39%), Positives = 185/305 (60%), Gaps = 2/305 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + + +++ VN +I++++ SDV+M+ +V +Y++ +GGKRLRP+L L ++ L
Sbjct: 1 MQQVRAVVSAELDAVNAVIIEQLRSDVDMVENVGQYIVDAGGKRLRPVLVLLSSAALGPI 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF +
Sbjct: 61 SDAQIHFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNAPSVLVGDFLYTRAFQL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L+ ++ T+A GE+ QL + + +EE Y VI KTA LF+A E +
Sbjct: 121 MVALGNHDVLKMMADTTNTIAAGEVLQLIRAGDAATSEEQYYDVIDRKTAALFAAGCEGA 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+AG + + L+ G ++GIAFQL+DD+LDY G+ GKN+G+D GKPTLP+I
Sbjct: 181 ALLAGADAARVEQLRVCGRSIGIAFQLIDDLLDYEGDPEVTGKNVGDDLAEGKPTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G++ + N + IN L + +R+ +L T A KA +L+
Sbjct: 241 VMREGSEAQANLVRDAINAKDR--ARLPEIIQAVRDCGSLEYTRNAALDCRDKALKALKE 298
Query: 301 LPDSS 305
LPDS
Sbjct: 299 LPDSP 303
>gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
Length = 325
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 168/322 (52%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEY 59
++ + +ME + + S V ++ + Y++ GK++RPM TA M
Sbjct: 5 SQIKQPIIAEMELFEKKFHESMTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGT 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 65 VNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLL 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ I+ + L +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A +
Sbjct: 125 LSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDITEDVYYEIIRKKTATLIAACCAL 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 185 GAKAVIEDDVQVENMRMFGELIGMAFQIKDDLFDY--SEEAIGKPTGIDIKEQKMTLPLI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
T +EK + ++I + + +K+ ++ N L E + + Q+A L
Sbjct: 243 HVLNTCTPQEKKWLINSIKNHNKDKKRVKEVIAFVKNNNGLAYAEEKMVQFQQEALSLLE 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
PDS +K +L +V++ ++R
Sbjct: 303 NYPDSEFKAALTLMVNYVIERK 324
>gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 324
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +E+ + E+ N + S+ + + ++ S GK +RP+L L TA +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ +
Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G V + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++G + E + I + EN+ + N + E R Y KA D L L
Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S + SL+++ D+ + R
Sbjct: 304 PESGARTSLIQLADYIMTRS 323
>gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 337
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 118/319 (36%), Positives = 184/319 (57%), Gaps = 1/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RG 61
L++ + I ++ SDVE++ + Y I +GGKRLR +LTL +A + Y +G
Sbjct: 17 QLKESVEDKLVLTEEKIKLKLNSDVELVQKMTNYHIKTGGKRLRALLTLGSAKLCGYSKG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V LA +E IH ATL+HDDV+D+ +RRGK +WGN +SVL+GD+LLS+ F M+
Sbjct: 77 SRDVNLAACVELIHGATLMHDDVIDEGIIRRGKETLNEIWGNHSSVLIGDYLLSRCFEMM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E + E L+ LS + +A+GE+ QL +D+ EE YL +I +KTA LF+A+ +V +
Sbjct: 137 VEDGNLEVLKLLSSTSSKIAQGEVLQLQHKGEVDMLEETYLKIISAKTAELFAASTKVGA 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ V N + AL+ YG NLG+ FQ+ DD LDY E+ GK +G+DF GK TLP+IL
Sbjct: 197 ILSDVDNKEKDALEFYGRNLGLTFQIADDTLDYNSELKMFGKTVGQDFFEGKITLPIILL 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
FQ+ EK K ++ +K ++++ + + + +A Y A ++L
Sbjct: 257 FQKLDLIEKENLKKIFIKEIRDKDDFEKTISLIKKYKIIEECYQKAQHYINLASNALTVF 316
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+S K + F L R
Sbjct: 317 EESKEKNIFKNLTSFSLAR 335
>gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
amyloliquefaciens FZB42]
gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42]
Length = 349
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 33 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 93 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 153 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 212
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 213 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + + + + + + E L ++ A+ + + Y +KA + L L
Sbjct: 271 --YALRQPELKNQLKLINSETTQEQLAPIIENIKRTDAIEKSMAVSDRYLKKAFEKLNTL 328
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 329 PRGRARSSLAAIAKYIGKRK 348
>gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101]
Length = 323
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 158/322 (49%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L G+
Sbjct: 6 ELLQPVEADLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALAADGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LTARHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E ++ LS V LA+GE++Q + + E YL KTA L + +
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTGQSFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ L +G LG+AFQ+VDD+LD+ G ++GK D G T P +
Sbjct: 186 AGVLSGLPAHQLDELYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLATGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I +L +A ++R ++A+ + A + +A++++
Sbjct: 246 YAL-----EEHPALAGLIEREFSEDGDLDQALELVRNSQAIQRSRALAEGFANEAREAIS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S + +L+ + +F L RL
Sbjct: 301 WLPASDCRSALLALPEFVLSRL 322
>gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D]
gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
Length = 325
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 130/319 (40%), Positives = 197/319 (61%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++
Sbjct: 9 LLAPVAEDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEH 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 69 QHELAAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQ 128
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 129 ANSMRIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 188
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G ++ +A YG +G AFQ++DD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 189 SGAGAAIEEAAAEYGRRIGTAFQIIDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLS 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
GT+ ++ + I G E+ F ++ + AL T A A+ + LP
Sbjct: 249 NGTEEQRALVRQAIEQGGT--EHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPP 306
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S ++++L+++ F LQR +
Sbjct: 307 SLFRQTLIDLCAFSLQRQS 325
>gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
Length = 325
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 164/320 (51%), Gaps = 8/320 (2%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEYRG 61
L D+ ++ + + + ++ ++L +GGKR+RP L L +
Sbjct: 10 SALVEDDLSQMTRNLKNLLGTKHPVLYAAAEHLFNAGGKRIRPALVLLVSRATAAYGEPT 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H LA E IHTA+L+HDDV+D SA+RRG +GN+ +VL GD+L A +
Sbjct: 70 ERHRRLAEITEMIHTASLVHDDVIDTSAVRRGIDTVNSRFGNRVAVLAGDYLFGMASAYL 129
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S E +E L +V EGEL Q +L + D+T E Y+ KTA L + ++
Sbjct: 130 ARLGSLEVVELLGIVISHFGEGELLQSTLQFDSDLTFEQYIDKSFYKTASLMAGTSRAAA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ +V +AL YG +LGIAFQ++DD+LD+ G ++GK G D R+G T PV+ A
Sbjct: 190 VLSESPAAVCEALYEYGRHLGIAFQVIDDLLDFTGSTAKLGKPAGSDLRDGNLTAPVLYA 249
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + G +L+KA ++ +RAL T A ++ ++A SL L
Sbjct: 250 LEESPHLSGLIERQFEQKG-----DLEKALSLIHASRALERTRELAETHARRAVTSLDTL 304
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S +++L ++V + RL
Sbjct: 305 SPSPAREALKDLVGHTVSRL 324
>gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7]
Length = 345
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +E+ + E+ N + S+ + + ++ S GK +RP+L L TA +
Sbjct: 26 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 85
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A
Sbjct: 86 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 145
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ +
Sbjct: 146 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G V + +G LG FQ+ DD+ DY +GK G D R GK TLP++ A
Sbjct: 206 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFK-EANIGKPTGNDIREGKVTLPLLYA 264
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++G + E + I + EN+ + N + E R Y KA D L L
Sbjct: 265 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 324
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S + SL+++ D+ + R
Sbjct: 325 PESGARTSLIQLADYIMTRS 344
>gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
266]
gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
266]
Length = 324
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 181/322 (56%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + ++E + S ++ V +Y++ GK++RP L L +A M
Sbjct: 3 IKDVTASVAVEVEIFQERYKSVLHSKNTLVDKVTRYVLKQQGKQIRPALVLLSAKMCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 NDSTYRSAIMVELLHSATLIHDDVVDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E K +L +S ++EGE+ Q+ +++LD++EEDYL VI KTA L +++ +
Sbjct: 123 SLENKDYFSLHIVSEAVRRMSEGEILQIQKTRSLDISEEDYLSVISDKTASLIASSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A + +K+YG LG+AFQ+ DD+LDY G+ N+ GK +G D ++ K TLP+I
Sbjct: 183 AASATEDEAAIAKMKNYGEYLGLAFQIRDDLLDYTGDSNKTGKQMGIDVKDKKITLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + RE+N +S + K + ++ + L A + +A+ S++
Sbjct: 243 ALREVPVREQNVIRSILKSSKKRALKSGEVIEFVKRSGGLEYAAGVAEGFALQARQSIKD 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+S+ K+SL+++VDF ++R +
Sbjct: 303 FPESAAKQSLLDLVDFVMKRQH 324
>gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
Length = 326
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 173/323 (53%), Gaps = 5/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEY 59
+ ++ +ME + S V ++ + Y++ GK++RPM TA M
Sbjct: 5 EQIKLPIASEMELFEEKFRDSMSSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMVSGGS 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+
Sbjct: 65 IDERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDFLLSKGLL 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE- 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A
Sbjct: 125 LSIDNNDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSL 184
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +A +V + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+
Sbjct: 185 GACSVAPDDKAVVEKMRKFGELIGMAFQIKDDLFDYTDDA--IGKPTGIDIKEQKMTLPL 242
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A + +EK++ ++I + + +K+ +++ L E + + Q+A +
Sbjct: 243 IYALNNCSSKEKSWVINSIKNHNKDKKRVKEVIQFVKDKNGLTYAENKMIQFQQEALQLI 302
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P S +K SL+ +V++ ++R
Sbjct: 303 TDFPSSPYKDSLILMVNYVIERK 325
>gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus
curdlanolyticus YK9]
gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus
curdlanolyticus YK9]
Length = 325
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 1/311 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
D+ ++ + + I SD ++ + +L+ +GGKR+RP+ L + +YR D +A
Sbjct: 13 DLNEIEAELERAITSDHTLMTETSVHLLKAGGKRIRPIFVLLSGKFGQYRLDVMKNIAVP 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+L+HDDV+D++ RRG++ + W N+ ++ GD++ +A + + +
Sbjct: 73 LELIHMASLVHDDVIDNAETRRGQLTVKSKWDNRIAMYTGDYIHGKALTVATKLDNPRIH 132
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ LS + GE+ Q+ N + + YL I+ KTA+L + + ++ +L A
Sbjct: 133 QILSKAMVEMCIGEMEQIRDFFNTEQSVRQYLLRIRRKTALLIAISCQLGALAAETDEKY 192
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV-ILAFQRGTKRE 249
L +G N+G+AFQ+ DDVLD G ++GK G D R G TLPV + + +
Sbjct: 193 ANRLYRFGYNVGMAFQIRDDVLDLCGTEKQIGKPPGSDIRQGNITLPVLLALHDTSLRPK 252
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
I + + +A ++R + + E A Y QKA +L LPD + KKS
Sbjct: 253 LLQEIERIQSADGAAADTSEALRLIRSSNGIKQAEALADRYTQKALTALEGLPDLAAKKS 312
Query: 310 LMEVVDFCLQR 320
L ++ F +R
Sbjct: 313 LKDIARFVNKR 323
>gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
SAFR-032]
gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus
pumilus SAFR-032]
Length = 320
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 165/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 3 LKAMISFLNHDIDIIEKELEQTVRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++
Sbjct: 63 INKIKYVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + A E LS + L GE+ Q+ N+D YL IK KTA+L + + ++
Sbjct: 123 MTKINHPMAHEILSKMVVELCLGEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG +AL +G +G+++Q++DDVLD+ E+GK +G D G TLPV+
Sbjct: 183 AIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
K + + + + + LK +++ A+ + + Y +KA + L
Sbjct: 242 ---YALKNPTLEGQLKLINSETTEMQLKPVIEHLKQTDAIDRSIRVSEMYLKKAFEQLDK 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + SL + + +R
Sbjct: 299 LPRGRARTSLASIAKYIGKRK 319
>gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091]
gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091]
Length = 327
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 92/331 (27%), Positives = 175/331 (52%), Gaps = 16/331 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M++L+ E+++ +I + + E + + +YLI +GGK+ RP LTL + +
Sbjct: 4 MEILKAYA----EEIDVVIDDSLSKLEPESLYESSEYLIKAGGKKFRPALTLLSCQAVGG 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + + A AIE HT +L+HDD++D+ RRGK A VWG ++L GD L +++F
Sbjct: 60 KPEKALKAAAAIELTHTFSLIHDDIMDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKSFE 119
Query: 120 MVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ ++ + + EG+ ++ +VT+++Y+++I KT
Sbjct: 120 LLSQSAEDNIAYERVVDALQVLTNSCINICEGQALDMAFEDTFNVTKDEYMNMIYKKTGD 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +A+ + +++ G ++ QAL++YG +G+AFQ+ DD +D G+ + +GK +G D
Sbjct: 180 LITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGDES-IGKPVGSDLVE 238
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK TL V+ A ++ K + + + S+ + +A I+ + A+ +AY
Sbjct: 239 GKKTLMVVYALEKANKEDHDRLVELLEANDESI--IPEAMEILEKYGAINYARSKAYDCV 296
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++K +L LPDS K +L ++ DF R +
Sbjct: 297 IESKQALSILPDSDAKDALFKLADFVFTRKS 327
>gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
fusiformis ZC1]
gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
fusiformis ZC1]
Length = 324
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K+L D+E + + K + S +I D +L+ +GGKR+RP+ L A +Y
Sbjct: 6 LKLLYSDLKSDIEIIEQELEKAVDSSSYLINDASLHLLQAGGKRIRPIFVLLGAKFGDYD 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DDS +RRG+ + W N+ ++ GDF+ ++A
Sbjct: 66 IEKMKDVAVPLELIHMASLVHDDVIDDSNMRRGRPTVKSQWNNRVAMYTGDFIFARALEY 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + L+ + GE+ Q+ LD +DY IK KTA+L S++ E+
Sbjct: 126 ITKLEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRRIKRKTALLISSSCELG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + LK +G +G++FQ++DDVLD E+GK G D G TLP++L
Sbjct: 186 AVAAGVDTKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGKPAGSDLLQGNITLPILL 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + + G ++ + +R++ A+ + Y +KA +
Sbjct: 246 LK---DDPEMQPYLVKVFAGTLTESERQNMLQYVRKSHAIEQANRMSDKYLKKALQEIDA 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP KK L +V F +R
Sbjct: 303 LPKHPVKKKLRDVALFMGKRK 323
>gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
10987]
gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
10987]
Length = 320
Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ + D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYDYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLCKKIKSVHENTTADEMKEIIEAVKNSDAIDKAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
Length = 329
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 186/321 (57%), Gaps = 9/321 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ +D+ +V+ +I +R+ S V +I + Y+I +GGKRLRP+L A L Y
Sbjct: 9 IISEDLAEVDRVIKERLDSPVALIRTIATYIISAGGKRLRPVLLTLFARALGYGQTEQQR 68
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+H L+A +EFIHTATLLHDD+VD+S LRRG A +GN SVLVGDFL S++F
Sbjct: 69 AQGHHWLMAAVVEFIHTATLLHDDIVDESTLRRGAPTANAQFGNAASVLVGDFLYSRSFQ 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E + L+ L+ +AEGE+ QL + DV E YL VI+ KTA LF A+ +
Sbjct: 129 MMVEVEQLHILKTLADATNVIAEGEVLQLLNCNDPDVDEAAYLQVIRFKTAKLFEASARI 188
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++AG + A +YG +LG AFQ++DDVLDY GE +GKNIG+D R GK TLP+I
Sbjct: 189 GAVLAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESETLGKNIGDDLREGKATLPLI 248
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ G+ ++ + I +G+ E+ ++ AL A +A +L
Sbjct: 249 RVMEVGSPEDREIVRQAILNGET--EHFDLIHQAIQRCDALGYARQLAEQEANRAHAALA 306
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+P S ++++L+ + + + R
Sbjct: 307 QMPPSQYREALVYLSSYSVSR 327
>gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis]
gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
Length = 343
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 18/337 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + V+ +IL+ + + + ++ +GGKR+RP + L A +
Sbjct: 5 DELFARIKEKAKDVDRVILELVPEKEPLELYKAARHYPLAGGKRVRPFVVLRAAEAVGGD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A ++EFIH +L+HDD++D LRRG+ +WG ++L GD L S+AF
Sbjct: 65 PEKALYPAASVEFIHNYSLVHDDIMDMDELRRGRPTVHKLWGVNMAILAGDLLFSKAFEA 124
Query: 121 VIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + + +A + L EG+ + +VT E+YL +I KT LF
Sbjct: 125 IAKAEVPAEKKARILDVLVRTSNLLCEGQALDIEFETKEEVTVEEYLKMISGKTGALFQG 184
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ E+ +++ AL +GMN+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 185 SAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 244
Query: 236 LPVILAFQRGTKREKNFWKSTIND------------GKISVENLKKAFIIMRENRALVDT 283
L V F+ ++ +K + + E + KA ++++ ++
Sbjct: 245 LIVSHFFEHASEEDKAEFLKVFGKYAGDAKGDALIHDENVKEEVAKAIELLKKYGSIDYA 304
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++A ++L+ LP+S ++ L + +F ++R
Sbjct: 305 ANYAKNLIREANEALKVLPESEARRDLELLAEFLVER 341
>gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 322
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 111/321 (34%), Positives = 166/321 (51%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++ +N + + ++ DV K++I SGGKR+RPMLTL A + Y
Sbjct: 1 MNELLRYFQRELPGINQFLDAEAEALNGLVRDVAKHIIGSGGKRIRPMLTLLFARAMGYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D++ +AC++E +H+ATLLHDD +DD+ LRRG+ AA LV+G ++L GD LL+ A M
Sbjct: 61 RDDYHAIACSLELLHSATLLHDDYLDDAELRRGRSAAHLVFGRTETILAGDALLALANEM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ A GE+ ++ SK+ + E Y+++I KTA L A
Sbjct: 121 GARYGNARLCWLLARGIMETAVGEIEEIRFSKHPTLDREAYMNIIIGKTARLIECACRCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +AG A YG+NLGIAFQLVDD LDY +E GK G D R GK TLP+IL
Sbjct: 181 AALAGATPEQEDAAGEYGLNLGIAFQLVDDALDYASPTSETGKPEGGDLREGKVTLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G + + DG+++ E + +++ T A Y ++AK L
Sbjct: 241 FMEDGDEAASETLLGLMRDGELTEEQCAEILAQVQDAGCPQRTRDEAAHYVERAKACLAG 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P L + D+ L R
Sbjct: 301 FPPGEPVTVLGQAADYVLTRT 321
>gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 326
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 167/321 (52%), Gaps = 5/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60
+++ ++ME + S V ++ + Y++ GK++RPM A ML
Sbjct: 6 QIKEPIREEMELFEQKFRGAMSSKVALLNRITYYIVNRKGKQMRPMFIFLVAKMLSGGKV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ +
Sbjct: 66 TERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EV 179
I+ + L +S+ ++EGEL Q+ ++ LD+ EE Y VI+ KTA L +A
Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQMEKARRLDIVEEVYYEVIRQKTATLIAACCAMG 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I
Sbjct: 186 ACSVMPNAPELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
T+ EK + +++ + +K+ ++ + L + + QKA L
Sbjct: 244 YVLNTCTEEEKKWLINSVKKYNKDKKRVKEVINFVKTHNGLEYATAKMKDFQQKALSLLD 303
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
P S++K+SL+ +V++ + R
Sbjct: 304 EFPASAYKESLILMVNYVINR 324
>gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 296
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 129/295 (43%), Positives = 180/295 (61%), Gaps = 1/295 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y
Sbjct: 3 LEQITALTTQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++
Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
A + G + + + I +G L+ M++ +L T RA KA
Sbjct: 243 AMRNGNAEQSSLIRKAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAI 296
>gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
Length = 325
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 170/322 (52%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EY 59
+ ++ +ME + S V ++ + Y++ GK++RPM A M+
Sbjct: 5 EQIKQPIAYEMELFEQKFQLSMASKVALLNRITHYIVNRKGKQMRPMFVFLVAKMMNNGE 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VL+GD+LLS+
Sbjct: 65 VSERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLIGDYLLSKGLL 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A +
Sbjct: 125 LSIDNNDFDLLKIISVAVREMSEGELLQIEKARQLDITEAVYYDIIRQKTATLIAACCSL 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 185 GAASVKPNSPEVESMRKFGELIGMAFQIKDDLFDY--GEEAIGKPTGIDIKEQKMTLPLI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+K+EK++ +++ + + +K+ ++ N L + ++ ++A L
Sbjct: 243 HVLNNCSKKEKSWLINSVKNHNKDKKRVKEVIAFVKSNGGLDYAVSKMKAFQEEALAILS 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P+S++K SL +VD+ + R
Sbjct: 303 KYPESAYKASLKLMVDYVIDRK 324
>gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
Length = 348
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 114/320 (35%), Positives = 194/320 (60%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L +ME+ ++ + I ++V + V++Y + + GKR RPML L +A + +YR
Sbjct: 29 LSDIQRLIANEMEQTERVMQREIYTEVALAQSVMRYALQAKGKRFRPMLHLLSAGVCDYR 88
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD A IEFIH ATLLHDDVVD S +RRG+ +A +++ N S+LVGDFL ++AF +
Sbjct: 89 GDFAPTAAAFIEFIHNATLLHDDVVDSSDIRRGQASAHIIFSNAASILVGDFLYTRAFQL 148
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L+ ++ +A GE+ QL+ N D+ E Y VI+ KTAVLFSAA +++
Sbjct: 149 MVSSGNAAVLKTMADATNLIAAGEVMQLANMHNPDIDETCYYRVIELKTAVLFSAACKIA 208
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +AGV AL YG LG+AFQ++DD+LDY G+ +++GK +G+D GKPT+P+I
Sbjct: 209 AQLAGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESKIGKALGDDLAEGKPTMPLIR 268
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q+ ++ ++ + G E + + ++++ AL T+ +A A ++L
Sbjct: 269 ALQQLCDPDQKRLRAILQTGDR--EAITEVITLLKKTDALAYTQAQAEKMATAAAEALMI 326
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P++ +K +L+ + + R
Sbjct: 327 FPENDYKNALISLAYQAVHR 346
>gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens DSM 7]
gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens DSM 7]
gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens LL3]
Length = 320
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y
Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+
Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A LS + GE+ Q+ N++ YL IK KTA+L + + ++ +
Sbjct: 124 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+
Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVL-- 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + + + + + + E L ++ A+ + + Y +KA + L L
Sbjct: 242 --YALRQPELRNQLKLINSETTQEQLAPIIKNIKRTDAIEKSMAVSDRYLKKAFEKLNTL 299
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + SL + + +R
Sbjct: 300 PRGRARSSLAAIAKYIGKRK 319
>gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
Geranyltranstransferase (farnesyldiphosphate synthase)
or Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 336
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L SDV I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQTGLAAVEAGLLDATKSDVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVDSANTRWGNSIAVLTGDFLFARA-SHT 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ S L G++ + + + + YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRIQSEAFERLVTGQILETAGPQEGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG SV L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMAGADESVVDILTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLHL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + DG +S ++ +A ++R + AL Y ++A+ L
Sbjct: 253 RAAAAAHGRPEDLELVALVDGDLSDDDRHAEALRLLRAHPALEQARRDTVRYAEEARAML 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K +L E+ D + R
Sbjct: 313 APLPDGYAKSALAEMCDAVVHR 334
>gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
Length = 323
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 165/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L +G+
Sbjct: 6 ELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALSAQGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LA+GE++Q + T E YL KTA L + +
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTAQTFETYLEKSYCKTASLIANSCRA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G S +L +G LG+AFQ+VDD+LD+ G ++GK D +G T P
Sbjct: 186 AGVLSGCSPSQLDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPTF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I+ +L KA ++R ++A+ T A ++ +++++S+
Sbjct: 246 YAL-----GEHPSLHLLIDRQFSEPGDLDKALEMVRASKAIERTRELAETFARESRESIA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S +++LME+ DF L RL
Sbjct: 301 WLPESEAQRALMELPDFVLSRL 322
>gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
Length = 340
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + V+ +L I ++ + ++ +GGKR+RP + L +
Sbjct: 3 DELFKKIKEKAKFVDEKLLSLIPEKEPKILYEAARHYPLAGGKRVRPFVVLTATEAVGGE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ + A AIE IH +L+HDD++D RRG+ VWG ++L GD L S+AF
Sbjct: 63 WEKAIYPAVAIELIHNYSLVHDDIMDMDETRRGRPTVHKVWGINMAILAGDLLFSKAFEA 122
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ K LE + + L EG+ L K VT E+Y+ +I KT LF A
Sbjct: 123 ISRAEIPPEKKARVLETVVKASNELCEGQAMDLEFEKRDTVTIEEYMRMISGKTGALFDA 182
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ +V ++ AL ++G N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 183 SAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 242
Query: 236 LPVILAFQRGTKREKNFWKSTIND-----------GKISVENLKKAFIIMRENRALVDTE 284
L V F+ +++K + + + +A ++++ ++
Sbjct: 243 LIVAHFFENADEKDKQKFLKVFGKYAGDVKGEGIIEEDIKAEVMEAIDLLKKYGSIDYAA 302
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +KA ++L+ LP+S +K L + F ++R
Sbjct: 303 NIAREMVKKANEALKVLPESEARKDLELLARFIVER 338
>gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 325
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ K++ + S+V +I + Y+I GK +RP+ A ML
Sbjct: 5 LDKIKNPIKKEINEFEKQFTNITKSNVSLIDQITHYIIHRKGKLIRPIFVFLIAKMLGNI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
AC IE IHTATL+HDDV+D+S+LRRG + +W N+ +VL+GD+LLS++ +
Sbjct: 65 QKKTYHTACLIELIHTATLVHDDVIDNSSLRRGSFSINAIWKNKIAVLIGDYLLSKSLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ + ++EGEL Q+ S L++TE+ Y +I KTA L +A+ E
Sbjct: 125 ATNNNYYDLLKIICQTIKDMSEGELLQMEESDKLNITEKTYNQIIYHKTASLIAASCECG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVI 239
+ V ++ +G+ +GIAFQ+ DD+ DY N GK IG D R K TLP+I
Sbjct: 185 ARSVNVDEKTALKMRKFGLFVGIAFQIKDDLFDYEEKNNNFTGKPIGIDLREKKITLPLI 244
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ +K + + + K +++ L + + A L
Sbjct: 245 YTIRKASKE--DQKWILNSIKNYDEKKRDKIIDSVKKYGGLEYATQKMIKFRNNALKILE 302
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
P+S KK+L +V+F ++R
Sbjct: 303 LYPESPIKKALKIMVNFIVER 323
>gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 326
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L + ++ I + S V + +V +Y+ SGGKR+RP+L L T+ +
Sbjct: 3 IADVYALLKPQVAEIEQEIQSNLTSRVRRVQEVGEYIFQSGGKRIRPLLVLLTSKLCGGD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + IE+IHTATLLHDDV+D++ +RRG+ +A +GN+ +LVGD+L S+AF +
Sbjct: 63 ERRAIKIGGIIEYIHTATLLHDDVIDEACVRRGRDSANFKFGNEMVILVGDYLYSKAFQV 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + LS V ++EGE+ QL S + VT EDY +I+ KTA+L +A +
Sbjct: 123 LVADGDPRVQKTLSDVTTLMSEGEVFQLVKSFDFSVTLEDYFQIIEHKTAILIAACAKCG 182
Query: 181 SLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
A + AL +G N+G+AFQL+DD+LDY G+ + +GK IG D + GK T+PVI
Sbjct: 183 GYTAPDLSEEMADALWDFGYNIGMAFQLIDDILDYMGDASTLGKTIGTDLKEGKMTIPVI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ EK+ + I I + E+L +M + AYS+ KA+ +
Sbjct: 243 KLRDLASEEEKDRLEKLIEQQMIPTAEDLSFVIGLMDTYDIRRHSMDVAYSFLDKARKAA 302
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LP ++ L V D+ + R
Sbjct: 303 EVLPAGIYRDCLHVVADYVINRQ 325
>gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
coahuilensis m4-4]
Length = 320
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 165/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +D+ + + + I S + + + +L+ +GGKR+RP+ L EY
Sbjct: 3 LAQYYSFLHQDINIIEEELQQAISSSSQTLNEASLHLLQAGGKRIRPVFVLLGGKFGEYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A ++E IH A+L+ DDV+DD+ +RRG + W N+ ++ GD++ +++
Sbjct: 63 IDVVKNVAVSLELIHMASLVLDDVIDDAEIRRGIPTVKSQWDNKVAMYTGDYIFARSLDY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + EA + LS + +GE+ Q+ + + DYL IK KTA+L + + ++
Sbjct: 123 MLNIPNPEAHKILSDAIVEVCKGEIAQIKDKYLFEQSLRDYLRRIKRKTALLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G V + L +G +G++FQ++DD+LD+ +E+GK G D G TLPV+
Sbjct: 183 AIVSGAPREVHERLYRFGYYVGMSFQIIDDILDFTATADELGKPAGGDLLQGNITLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + T+ IS + L+ + ++ + A+ + + Y +KA LR
Sbjct: 242 ---FAMEDPTLRQQITLVHENISSDELQTIIVNVKNSDAIERSHQVSQQYLKKAIQELRH 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + K +L ++ + +R
Sbjct: 299 LPKNKAKSTLRDIATYLGKRK 319
>gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
Length = 349
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 88/319 (27%), Positives = 146/319 (45%), Gaps = 3/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +E V L+ + + S + + ++L+ +GGKR RP+L L A +
Sbjct: 32 LRTRVRDGLEAVETLLRQAVRSSGYPFLTETSRHLVEAGGKRFRPLLVLLAAEYGDPTAP 91
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A +E H ATL HDDV+D++ +RRG +A W N ++L GDFL S+A ++
Sbjct: 92 GVVPAAAVVELTHLATLYHDDVMDEAVVRRGTASANARWSNTIAILTGDFLFSRASDLLA 151
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L +G++R+ + E YL V+ KT L + A ++
Sbjct: 152 DLGPEAVRIQARTFER-LVQGQIRETLGPEEGVDPVEHYLRVVADKTGSLIATAARFGAM 210
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G + + +YG +G AFQL DD+LD + E GK G D R G TLPV+
Sbjct: 211 FSGAPAWIVDVMVTYGERIGTAFQLSDDLLDVMSDSTESGKAPGTDLREGVRTLPVLHVL 270
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + D E ++ ++R + A+ + +A+ +L LP
Sbjct: 271 RSMGPSDGRLRELLNGD-LTDDERHRETLALLRAHPAMERARADLRRWVSEARAALEPLP 329
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D ++L + DF L R
Sbjct: 330 DQPATQALQRLCDFVLART 348
>gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ SDV I D ++L+ +GGKR RP+L + + +
Sbjct: 14 QALEADVQSGLAAVEAGLLEATKSDVPFITDAAQHLVRAGGKRFRPLLVMLASQFGDPDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVPSANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G L YG LGIAFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADERTVDILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ K + DG +S ++ L + +R + AL Y Q+A+ +L
Sbjct: 253 RAQAAADGKPDDVELVELLDGDLSGDDALAEVLRRLRAHPALEQARQDTVRYAQEARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 APLPEGYAKAALEELCDAVVHR 334
>gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
Length = 325
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 169/321 (52%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ ++M + + S V ++ + Y++ GK++RPM TA ML
Sbjct: 5 DQIKAPIEQEMILFEEKFFQSMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMLSGGS 64
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVD S RRG + +W N+ +VLVGD+LLS+
Sbjct: 65 VQERTYRGASVIELIHTATLVHDDVVDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGLL 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y H+I+ KTA L +A +
Sbjct: 125 LCIDNDDFDLLKIISVAVREMSEGELLQIEKARRLDITEEVYYHIIRQKTATLIAACCAL 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I
Sbjct: 185 GAASVSPGSEEVEKMREFGSLIGMAFQIKDDLFDY--GTKSIGKPTGIDIKEQKMTLPLI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ +K + +T+ + + + + +++ L + +Y +A + L
Sbjct: 243 HALQQADPDQKRWMINTVKNHHTDRKRVHELIALVKALGGLSYATTQMNAYKDQALELLA 302
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
PDS +K +L+ +V F ++R
Sbjct: 303 GYPDSVYKNALITMVRFVVER 323
>gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
Length = 323
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + I + ++ ++L + GKR+RP + + +
Sbjct: 6 SLFSPVEADLCVLTENLKALIGAQHAVLSAAAEHLFAASGKRIRPAIVFLVSRATLPDQG 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L HDDVVD + LRRG V+GN+ ++ GDFL +QA
Sbjct: 66 ITPRHCRLAEITEMIHTASLFHDDVVDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + + ++ LS V AEGE+RQ + +T +DYL KTA L + + +
Sbjct: 126 YLADLDNLQVVKLLSQVIKDFAEGEIRQGFNRFDTSITLDDYLLKTYYKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ +A+ +YG NLG+AFQ+VDD+LD+ E+GK G D R+G T PV+
Sbjct: 186 AAVLSEAPPETIEAMYTYGKNLGLAFQIVDDILDFTRSTAELGKPAGSDLRDGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + + + I +L+ A ++R++ A+ D A Y Q A +L
Sbjct: 246 FALPKAP-----YLHTLIEREFSEEGDLETALNLVRQSGAIEDARNLAKEYAQAALPALE 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S +++L ++ D+ L+RL
Sbjct: 301 VLPPSEPRQALSQLTDYVLERL 322
>gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
NA1000]
Length = 336
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 210/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A +
Sbjct: 15 VDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +
Sbjct: 75 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E
Sbjct: 135 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L
Sbjct: 195 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L
Sbjct: 255 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 314
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + W+++L E+ DF + R
Sbjct: 315 FPANDWREALEELADFAVSR 334
>gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
Length = 338
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 210/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A +
Sbjct: 17 VDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +
Sbjct: 77 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E
Sbjct: 137 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L
Sbjct: 197 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L
Sbjct: 257 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 316
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + W+++L E+ DF + R
Sbjct: 317 FPANDWREALEELADFAVSR 336
>gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
87.22]
Length = 336
Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE M V +L+ S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQAGMAAVEEGLLEATKSEVPFIQEAAQHLLRAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N +VL GDFL ++A V
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVPSANARWDNSLAVLTGDFLFARA-SHV 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +A+ + L G++ + + ++ + YL V+ KT L + A + +
Sbjct: 133 LADLGPDAVRIQAEAFERLVTGQILETAGPRDGRDPIDHYLDVLGGKTGSLVAVAGRLGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG +V L YG LG+AFQL DDVLD + +E GK G D R PT+PV+
Sbjct: 193 LMAGADETVVDVLTQYGERLGVAFQLADDVLDVASDSHESGKTPGTDLREHVPTMPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + L +A +R + AL Y ++A+ +L
Sbjct: 253 RERAGRLGLPEDIALCELLDSDLTDDARLAEALSRLRVHPALEQARRDTVRYAEEARSAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L+E+ D + R
Sbjct: 313 SPLPECDAKAALVELCDAVVHR 334
>gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
12804]
gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
Length = 345
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 114/298 (38%), Positives = 180/298 (60%), Gaps = 2/298 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM +V+ LI R+ S V++I +VV++LI +GGKRLRPML +
Sbjct: 26 LADIQRLVASDMGQVDALIRGRLHSRVDLIVEVVEHLIAAGGKRLRPMLVILAGRACGGH 85
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G LA IEFIHT+TLLHDDVVD+S++RRG+ A +WG+ +VLVGDFL S++F +
Sbjct: 86 GQGLHKLATIIEFIHTSTLLHDDVVDESSMRRGRSTANAIWGSLPAVLVGDFLYSRSFQL 145
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + ++ + LAEGE+ QL N DV E Y+ VIK KTAVLF+A+
Sbjct: 146 MVELGSMQIMQIIGKTTNQLAEGEILQLLHVHNPDVDEAAYMQVIKHKTAVLFAASTTAG 205
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG +++ ++ +G +LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I
Sbjct: 206 AILAGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAEQLGKNLGDDLAEGKVTLPLIH 265
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A ++N + + +G + ++ ++ A+ + RA+ + + A L
Sbjct: 266 AMNFSQGAQRNRLREIVQNGGMDAMDV--VMEAIQSTGAVDYSRRRAHEHARIAVSML 321
>gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter
Crescentus Cb15 Complexed With Calcium And Isoprenyl
Diphosphate
gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter
Crescentus Cb15 Complexed With Calcium And Isoprenyl
Diphosphate
Length = 345
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 210/320 (65%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A +
Sbjct: 24 VDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 83
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +
Sbjct: 84 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 143
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E
Sbjct: 144 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 203
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L
Sbjct: 204 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 263
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L
Sbjct: 264 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 323
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + W+++L E+ DF + R
Sbjct: 324 FPANDWREALEELADFAVSR 343
>gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 322
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 1 MKMLEDL--TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L ++ +V +L+ + ++ + VV+ LI +GGKRLRP L + +
Sbjct: 1 MTTLTSFGIISSELRQVEQKLLESVPEEIPELASVVRSLILAGGKRLRPALVFLSGSINS 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A A+E +HTATL+HDD +D + +RRG A ++G +L+GDFL ++A
Sbjct: 61 PDHEKLLNAAVAVELLHTATLIHDDTIDQADVRRGIATANSIFGPGVVILLGDFLFAKAA 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
T EA++ + V + +GELRQ N +EE+Y I +KTA LF E
Sbjct: 121 HYAAMTSDPEAIDLFAKVLMVIVDGELRQSLGKHNGVPSEEEYYRRIYAKTAALFECCTE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++ R+AL +YG LG+AFQ++DD+LD ++GK G D R G TLPV
Sbjct: 181 TGAILSKAPEPHRRALTTYGKKLGLAFQIIDDLLD-FTSTEQIGKPAGNDIRQGTITLPV 239
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL Q + +S + A I++ + AL +A + ++AK +L
Sbjct: 240 ILFLQSAAVGDPRAEHVKAVISGLSK-DYDGAIDIIKSSGALEKARDKAAALIEEAKAAL 298
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LP+S ++++ME+ F L+R
Sbjct: 299 LVLPNSDSREAMMEIAQFTLERT 321
>gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
25486]
gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
25486]
Length = 336
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVRTGLSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEADVRRGVDSANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + ++ +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYLDVMAGKTGSLVAVSVRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADERVVDTLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGVPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTI---NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + +A +RE+ AL Y Q+A+ L
Sbjct: 253 RAMADAEGRPEDLELVALLESDLTDDDRHAEALRRLREHPALEQARKDTVRYAQEARAML 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD S K +L E+ D + R
Sbjct: 313 APLPDCSAKAALEELCDAVVHR 334
>gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
Length = 342
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L K + V+ ++ K I + D ++ +GGKR+RP + L A +
Sbjct: 5 DELFARVKKMAKSVDDVLFKLIPEREPRKLYDAARHYPLAGGKRVRPFVVLRAAEAVGGD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ A A+E IH +L+HDD++D LRRG+ VWG ++L GD L S+AF
Sbjct: 65 PSKALYPAAAVELIHNYSLVHDDIMDMDELRRGRPTVHKVWGINMAILAGDLLFSKAFEA 124
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ K LE L + L EG+ + +VT ++YL +I KT LF
Sbjct: 125 VARAEISPEKKARILEVLVQTSNELCEGQALDIEFETREEVTVDEYLQMISGKTGALFDG 184
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +++ QAL +G N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 185 SATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 244
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVEN-----------LKKAFIIMRENRALVDTE 284
L V FQ ++ +K + ++ + KA ++R+ ++
Sbjct: 245 LIVSHFFQNASEEDKAQFMRVFGKYAGDAKDDALIHEDVKGEVAKAIELLRKYGSIDYAA 304
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++A D+L+ LP+S ++ L + +F ++R
Sbjct: 305 EYAKNLVREANDALKILPESEARRDLELLAEFLVER 340
>gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
Length = 323
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 167/322 (51%), Gaps = 8/322 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEYR 60
L D++ + + + + + ++ ++L GKR+RP + L + + +
Sbjct: 7 LFSPVEADLQLLTNNLKQLVGARHPILYAAAEHLFRVKGKRIRPAIVLLISRTTMLTQEI 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDD+VD+S +RRG ++ N+ +VL GDFL +Q+
Sbjct: 67 TPKHRRLAEITEMIHTASLVHDDIVDESEIRRGVPTVHSLFTNRIAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LAEGE++Q N D++ E YL KT+ L + + + +
Sbjct: 127 LANLDNLEVVKLLSKVIMDLAEGEIQQGLHRFNTDLSIEAYLEKSYYKTSSLIANSSKAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ V + Q + YG +G+AFQ+VDD+LD+ +GK D ++G T P +
Sbjct: 187 AIISDVPPEIVQDMYYYGRYIGLAFQIVDDILDFTSATESLGKPACSDLKSGNLTAPTLY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A EK + + +L++A +++ +R + ++ A Y + A + L+
Sbjct: 247 AL-----EEKPALEKLLERELAQDSDLEEAIQLIKNSRGIKRSQELATKYAKMAVEHLQS 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD +++L+ + D+ L RL+
Sbjct: 302 LPDCDSRQALINLTDYVLSRLS 323
>gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 324
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+KML D+E + + + + S ++ D +L+ +GGKR+RP+ TL +A +Y
Sbjct: 6 IKMLYADIKSDIEVIENELEQALNSSSHLLNDASVHLLQAGGKRIRPVFTLLSAKFGDYN 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH +L+HDDV+D+S +RRG+ + W N+ ++ G+F+ ++A
Sbjct: 66 IDRMKNIAVPLELIHMGSLVHDDVIDNSDMRRGRETVKAQWNNRVAMYTGNFIFARALQY 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V ++ A + L+ L GE+ Q+ LD + +DY IK KTA+L ++ E+
Sbjct: 126 VTSIENPRAHQILAKTMVELVNGEVIQIEDKFRLDQSLKDYFRRIKRKTALLIESSCELG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++G + LK YG +G++FQ+VDD+LD+ ++GK G D NG TLP++L
Sbjct: 186 AVVSGADEKTARHLKRYGYFVGMSFQIVDDILDFTATDKQLGKPAGSDLMNGNVTLPILL 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ E + ++R + A+ + + + Y +KA +
Sbjct: 246 MKDDPQLAPYLTKVAVAG---LTEEERQNMLALVRNSEAIKEATHISNLYLKKALKEVEA 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP KK L ++ F +R +
Sbjct: 303 LPKHPMKKKLRDIALFMGKRKS 324
>gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
Length = 321
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 189/320 (59%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y
Sbjct: 3 LPALIAPIADDMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + LS +AEGE+ QL + DV+++ YL V++ KTA LF AA +V
Sbjct: 123 MVEADSMRIMSILSEATTVIAEGEVLQLLNVHDPDVSQDRYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT +++ + I G + A AL A + +A+++L
Sbjct: 243 VMEVGTPQQQQLIRDAIKTGDADFAAVAAAIQA---TDALEHARLAAVAEADRAREALSI 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S + SL+E F + R
Sbjct: 300 YPVSPFLNSLLEFCAFAVNR 319
>gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
Length = 322
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 167/321 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L ++ +N + + ++ DV ++++ + GKR+RP+LT+ +A L Y
Sbjct: 1 MIELLAYFKNELPLINGFLDEETSKLEGLVKDVARHVLLAPGKRIRPVLTILSARGLGYG 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA ++E +H ATLLHDD++DD+ LRRG A+ LV+G ++L GD LL+ A +
Sbjct: 61 KDDIYPLAGSLELLHAATLLHDDILDDADLRRGVEASHLVFGTTETILAGDVLLALANKI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ EGE+ +++ + + Y+ +I KTA L + +
Sbjct: 121 GADYGKPRISSVLASGIMATVEGEILEIAHISEPLMNRDTYMDIIIGKTARLIETSCRLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A ++ A+ ++G+N+GIAFQLVDD LDY ++ GK G D + GK TLP+IL
Sbjct: 181 AILASDDRAMEDAVGNFGLNMGIAFQLVDDALDYESPSDDTGKPEGGDLKEGKITLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++E + I +S E +R++ T A Y +KAK L
Sbjct: 241 YLEMLQEKEAELLLAEIKSQTLSDEKRVHVLAEIRKHGLGARTRTYAAEYVEKAKSCLDP 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ K+ L + DF L R
Sbjct: 301 LPEGEEKQVLKQAADFVLTRK 321
>gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 325
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ ++M+ I SDV +I + Y++ GK++RPM A ML
Sbjct: 5 LEKVKGSINEEMKIFEKQFNAIIKSDVPLINKITHYIVHRKGKQIRPMFVFLIAKMLGTI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A IE IHTATL+HDDV+D+S LRRG + +W N+ +VLVGD+LLS++ +
Sbjct: 65 QKKTYHTASLIELIHTATLVHDDVIDNSYLRRGSFSINAIWKNKIAVLVGDYLLSKSLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + L+ + ++EGEL Q+ SK LD+TE+ Y +I KTA L +A+ E
Sbjct: 125 ATENNYHDLLKIICRTIKDMSEGELLQMEKSKKLDITEKIYNQIIYHKTASLIAASCEGG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE-VNEMGKNIGEDFRNGKPTLPVI 239
+ + ++ +G GIAFQ+ DD+ DY N GK IG DFR K TLP+I
Sbjct: 185 ARSVNANEDIALKMRKFGGLTGIAFQIKDDLFDYNESNENLTGKPIGIDFREKKMTLPLI 244
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + + + + + +++ + + A L
Sbjct: 245 YAIQKA--SQNDQKWILNSIKNYDEKKRHQIIAYVKKYGGIEYAIQKMIRIRNNALKILD 302
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
PDS+ KKSL +V+F ++R
Sbjct: 303 SYPDSTIKKSLKTMVNFIVER 323
>gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
R309803]
gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
R309803]
Length = 320
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 VTNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIASGANRETVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRKKITSVHENTTADEMKEIMEAVKNSDAIDKAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2]
gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2]
Length = 307
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 124/308 (40%), Positives = 186/308 (60%), Gaps = 3/308 (0%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+N I + S+V +I +V Y+I SGGKRLRP++ + A Y+G HV +A IEF+
Sbjct: 1 MNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFL 60
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A +++ + L+ S
Sbjct: 61 HTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFS 120
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQA 193
T++EGE+ QL ++ + +E++Y+ VI KTA +F AA + L A + A
Sbjct: 121 QSTNTISEGEVLQLINVRDPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDVSDHVDA 180
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I G+ +
Sbjct: 181 FATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIHTIANGSAEQATLI 240
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
K I G + E+L++ +R + L T +A + A D++ +P S +K +L +
Sbjct: 241 KDAIRSGGL--EHLEQIVETVRASGGLQYTVDKAAEQTRIALDAIAQVPASPYKDALFRL 298
Query: 314 VDFCLQRL 321
+ L+R
Sbjct: 299 AEESLKRT 306
>gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 320
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+ K+ + + + ++ + +L+ +GGKR+RP+ L Y
Sbjct: 3 LKAMYSFLNGDLNKIEEQLKLTVQASDPLVNEASLHLLEAGGKRIRPVFVLLGGQFGTYH 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+D + LRRGK + WG++ ++ VGD+L ++A
Sbjct: 63 FEKMKRVAVALELIHMASLVHDDVIDGAMLRRGKETIQAKWGDRFAMYVGDYLFARALEQ 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E A L+ + GE+ Q+S D YL IK KTA+L +A+ ++
Sbjct: 123 MCEIDDPVAHRILANTIVEVCRGEIEQISDKYRFDQNLRRYLQRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG ++ + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+
Sbjct: 183 AVVAGAPETIHKKLYWFGYYVGMSFQITDDILDFIGTEKQLGKPAGSDLSQGNVTLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
K + + + + ++ A+ + Y QKA D+L+
Sbjct: 242 ---YAMKERTVKEQIMKVNEHTTNREMADVIDGIKRTNAIEKSYELGDRYLQKAIDTLQK 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + +L + + +R
Sbjct: 299 LPRNRAWTALYNIAKYIGKRK 319
>gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 331
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 174/320 (54%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + +L +D+ + + S+V I ++ +YL GGKRLRP L L +A ++ YR
Sbjct: 11 VKEVFELISEDLLAIEREFGRDTVSNVAAITEIGEYLRNGGGKRLRPALLLLSAKLMAYR 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V L +E IHTATL+HDD++DD+ +RRG+ +A WGN VL GD+L QAF +
Sbjct: 71 GLGAVRLGAVVEIIHTATLVHDDIIDDAEIRRGRPSANTQWGNSKCVLAGDWLYMQAFKV 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ L+ L + + EGEL Q+ ++ +++ +I KTA LFS + +
Sbjct: 131 AVAERNFAVLDTLIELTQKMVEGELLQIEKLG-KLISLQEHFDLIDRKTACLFSVCMRLG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + L YG +G+AFQ+VDDVLD +GK +G D R GK T+ VI
Sbjct: 190 GILGGATAEQIEKLGEYGHCVGMAFQIVDDVLDLTASEEVLGKPVGSDLREGKVTMAVID 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T E++ + + + I++ ++ + RA + KAK ++
Sbjct: 250 ALEHCTPAERDTIVAVMRENGFVSVQHADILKILKRYDSVENALLRANEFAVKAKAAIEE 309
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PDS +K++L+ V +F ++R
Sbjct: 310 FPDSEYKRALIWVPEFVVER 329
>gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54]
Length = 321
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 133/320 (41%), Positives = 191/320 (59%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y+
Sbjct: 3 LPALIAPIVDDMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M
Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E S + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V
Sbjct: 123 MVEADSMRIMSILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I
Sbjct: 183 AVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIR 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ GT +++ + I G + A AL A + +A+++L
Sbjct: 243 VMEVGTPQQQQLIRDAIKTGDADFAAVAAAIQA---TDALEHARQAAVAEADRAREALSA 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S + SL+E F + R
Sbjct: 300 YPVSPFLNSLLEFCAFAVNR 319
>gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
Length = 318
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D+EKV + + S +++ + + +GGKRLRP + + ++ + R +N
Sbjct: 5 NQRLNGDIEKVEENLRNSVTSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENL 64
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ LA AIE +HTATL+HDDV+D+S RR +G ++ GDFL ++A M+ +
Sbjct: 65 IQLASAIELLHTATLIHDDVLDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLADI 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L + T+ EGE+ Q ++++ YL I KTAVLFSA+ + +L A
Sbjct: 125 VPANKLTIAARAVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFSASCALGALCA 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ +L G G+ FQL+DD DY+ +E GK + D G TLP I A +
Sbjct: 185 KCNPRITNSLSKLGFYYGVMFQLIDDFRDYKSGDSEWGKPVYNDLSKGILTLPAIYACRD 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K ++ N + E L ++ + + TE Y QKA + LP S
Sbjct: 245 S-KEIHKRVQNYWNKKVNTNEELNSIISLICSSGGMEYTENYIKRYRQKALREIDKLPQS 303
Query: 305 SWKKSLMEVVDFC 317
+ L ++++
Sbjct: 304 EARDILGDLINKL 316
>gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT]
gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosaeta thermophila PT]
Length = 327
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/331 (31%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 1 MKMLED-LTLKDMEK----VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
MK LE ++ + ++ I + + S E + D ++L+ +GGKRLRP L L
Sbjct: 1 MKTLEGGDLEAELRRRADLISKAIDELLPVSRPEGLYDAARHLLGAGGKRLRPSLLLIAG 60
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ V A AIE +H TL+HDD++D+++LRRGK A ++WG ++L GD L
Sbjct: 61 ESVGCDAARLVPAAVAIELVHNFTLIHDDIMDNASLRRGKPAVHVIWGTSGAILAGDTLY 120
Query: 115 SQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
S+AF M+ + ++ L+ ++ EG+ + L + VTE++YL +I+ KT
Sbjct: 121 SKAFEMLSMVDAPPERVLAAMDMLARTCTSICEGQWQDLEFERAESVTEKEYLEMIEKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
VL+ A+ + + + G V L+ +G G+ FQ+ DD+LD + +GK +G D
Sbjct: 181 GVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILDLTVPEDVLGKRLGGDI 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T+ +I A +G K E G+ S E L++A +R ++ RA
Sbjct: 241 LEGKKTMIIIDALSKGVKLE------IFGKGQASQEQLREAISALRRCGSIDYARRRAEE 294
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + K +L L DS KK L+E+ D+ ++R
Sbjct: 295 FVGRGKRALDVLDDSPAKKLLLELADYMIRR 325
>gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH1134]
gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH1134]
Length = 320
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N + YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENSTASEIQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGKAKYALQNVAKYIGKRK 319
>gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905]
gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905]
Length = 321
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K+L D++ + + + S +I D +L+ +GGKR+RP+ L A EY
Sbjct: 3 LKLLYSDLKSDIDIIERELENAVDSSSYLINDASLHLLQAGGKRIRPIFVLLGAKFGEYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DDS +RRG+ + W N+ ++ GDF+ ++A
Sbjct: 63 IEKMKDVAVPLELIHMASLVHDDVIDDSNMRRGRPTVKAQWNNRVAMYTGDFIFARALEY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + L+ + GE+ Q+ LD +DY IK KTA+L S++ E+
Sbjct: 123 ITKIEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRRIKRKTALLISSSCELG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + LK +G +G++FQ++DDVLD E+GK G D G TLP++L
Sbjct: 183 AVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGKPAGSDLLQGNITLPILL 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + + G ++ + +R++ A+ + Y +KA +
Sbjct: 243 LK---DDPEMQPFLVKVFAGTLTEAERQNMLQYVRKSHAIEQANRMSDKYLKKALQEIDA 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP KK L +V F +R
Sbjct: 300 LPKHPVKKKLRDVALFMGKRK 320
>gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
F65185]
gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
F65185]
Length = 320
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENSTASEIQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGKAKYALQNVAKYIGKRK 319
>gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12]
gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12]
Length = 326
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 121/316 (38%), Positives = 184/316 (58%), Gaps = 2/316 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+DME V+ I + S+V +I + Y++ GGKRLRP L L + L +RG
Sbjct: 12 APITEDMESVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQH 71
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
++A +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++
Sbjct: 72 IMAAVVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVG 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A
Sbjct: 132 SMRILNILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLAD 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++G
Sbjct: 192 ADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQG 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T ++ ++ I G S L I+ A+ A + A+ +L L S
Sbjct: 252 TAAQRTLIENAIRQGDTSA--LDDVMDIVHACGAMQAVRKAAQGEIRVAERALSPLAPSP 309
Query: 306 WKKSLMEVVDFCLQRL 321
+++L+++ + L R
Sbjct: 310 ARQALLDLCAYSLGRT 325
>gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803]
gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803]
Length = 325
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 173/323 (53%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ ++ K+M+ + + S V ++ + Y++ GK++RPM A M+
Sbjct: 4 ISQIKLPVEKEMDLFEKKFFESMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSEG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 64 SVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A
Sbjct: 124 LLSIDNNDFDLLKIISVAVKEMSEGELLQIEKARRLDITEAVYYDIIRQKTATLIAACCS 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + +++ ++ +G +G+AFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 LGAASVKPESNEIAKMRRFGELIGMAFQIKDDLFDY--GTQKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I +++E+N+ +++ + +++ +R+ L R + ++A L
Sbjct: 242 IYVLNNVSEKERNWVINSVKNHNKDRARVREVINFVRDKGGLDYAVSRMKEFQREALLIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P+SS+++SL +V++ ++R
Sbjct: 302 EDYPNSSYRESLELMVNYVIERK 324
>gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis Bt407]
gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis Bt407]
gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 320
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENTTASEMQEIIDAVKNSPAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGKAKYALQNVAKYIGKRK 319
>gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 333
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 143/322 (44%), Positives = 206/322 (63%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 12 DRLARQFAPKMEAVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYE 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 72 GDHDERLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ S+++ TE YL V++ KTA LFSAA EV
Sbjct: 132 MVETGSLRVLDILANASATIAEGEVLQLTASRDIATTEATYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + V AL YG LGIAFQ+ DD+LD++G+ + GKN+G+DFR K TLP+I
Sbjct: 192 GVIAGASDEVTGALYDYGDALGIAFQIADDLLDFQGDSAKTGKNVGDDFRERKLTLPLIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E+ FW+ TI G +L A ++ ++RAL +T A + +A+ +L
Sbjct: 252 AIAKADETERAFWRRTIEKGAQGEGDLDHAIALLHKHRALEETLADAQGWAARAQAALAK 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP + L ++ D+ + R++
Sbjct: 312 LPAHPVRDMLGDLSDYVVARVS 333
>gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
Length = 331
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/331 (29%), Positives = 155/331 (46%), Gaps = 9/331 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M + D+ + V I + + + D YL +GGK LRP LTL + +
Sbjct: 1 MSDVTDVLKEYSADVIKTIEENLAPVQPQNLQDACIYLTKAGGKMLRPALTLISCEAVGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ + A AIE IHT +L+HDD++DD +RRG + VW ++L GD L S+AF
Sbjct: 61 NKEDALKTAAAIELIHTFSLIHDDIMDDDDMRRGMPSVHKVWDEPLAILAGDTLFSKAFE 120
Query: 120 MVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
M+I +K + A + EG+ +S + DV E +Y +I KT
Sbjct: 121 MIISSKEENAHPEHVANALATVADACVKICEGQASDMSFEGDFDVKEAEYSEMIYKKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +AA + +++ G AL YG +GIAFQ+ DD LD + ++GK +G D
Sbjct: 181 LIAAATKAGAIMGGADEKEVTALYEYGRMIGIAFQIQDDYLDVISDEKDLGKPVGSDIAK 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK TL V+ A + + D S + + +A + + ++ A
Sbjct: 241 GKMTLMVVKALAESDGEDHERLLEILKDNDCSQDMVNEAIDLFNKYGSIDYAYNLALENV 300
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK+++ LPDS K L+ + DF + R +
Sbjct: 301 NGAKEAIAFLPDSDAKSMLIALADFVIARSS 331
>gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 320
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 103/319 (32%), Positives = 170/319 (53%), Gaps = 8/319 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---N 63
D+E++ + + + + ++ ++L +GGK +RP + L A G+
Sbjct: 7 PVEADLERLRQNLTRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPR 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA E IHTA+L+HDDV+D + +RRG ++ N+ +VL GD+L QA +
Sbjct: 67 HWRLAEITEMIHTASLVHDDVIDAADVRRGIDTVNTLFDNRIAVLAGDYLFGQAAWYLAN 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ E ++ LS V L EGE+RQ + DV+ EDYL KTA L S + + + L+
Sbjct: 127 LDNLEVVKLLSKVIMDLPEGEVRQSLTRFDPDVSMEDYLAKSFYKTASLMSGSSKAAGLL 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+GV V L +G +LGIAFQ+VDD+LD+ +GK +G D G T PV+ A
Sbjct: 187 SGVSEEVADRLFDFGRDLGIAFQIVDDLLDFTASAETLGKPVGSDLIQGNLTAPVLFAL- 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E + I + ++LK+A + ++ + + A Y Q+A ++L LPD
Sbjct: 246 ----EEFPQMRELILRELSNPQDLKQALEWVYQSEGIPRSRQLARDYAQRAAEALYSLPD 301
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S+ +++L ++VD+ L+RL+
Sbjct: 302 SAARRALFQMVDYVLERLH 320
>gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +++ + + + S ++ ++++ S GK +RP+L L A +
Sbjct: 4 LTEIRYPIEQELAEFQQIFDNSLTSSNPLLMRAIRHIRKSNGKMMRPILVLLLAKLFGSI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N + A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ SVLVGDFLL+ +
Sbjct: 64 KTNTLYSAVSLELLHTASLVHDDVVDESDERRGQLSVNALFNNKVSVLVGDFLLATSLVQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T+ + ++ ++ + LA+GE+ QLS N + +E+ Y VI KTA LF+A +V+
Sbjct: 124 VGLTRDCDIIDVVAHLGQNLADGEILQLSNVSNKEFSEDVYYSVIYKKTAALFAACAKVA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +G LGI FQ+ DD+ D + + +GK G D GK TLP +
Sbjct: 184 ALSAGASKESVIEATKFGEYLGICFQIKDDIFD-YSDSSSIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E I G+ S+ + K + ++ + E SY KA + +
Sbjct: 243 VLNKTNSEEIKELAFRIKGGEASLHEIHKFIGYVIDHGGIEYAESVMLSYRDKALEVIAP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP++ K +L +D+ + R
Sbjct: 303 LPNNEIKDALKCYLDYIVLRK 323
>gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / decaprenyl diphosphate synthase
[Syntrophus aciditrophicus SB]
gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / decaprenyl diphosphate synthase
[Syntrophus aciditrophicus SB]
Length = 324
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 114/311 (36%), Positives = 181/311 (58%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++V + + S+V +IP++V +L+ SGGKR RP+L L +A + Y+G L+
Sbjct: 12 AELKRVEEEMEFHLRSEVAIIPEIVTHLLGSGGKRFRPLLLLISADLFGYQGRRCHTLSA 71
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHTA+L HDDV+D + RRGKV+A +WGN VLVGDFL S+A+ ++ E S E
Sbjct: 72 VLEFIHTASLFHDDVIDKAESRRGKVSANNIWGNAAVVLVGDFLYSKAYQLMAEDGSMEI 131
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ +S + ++EGE+ QL +++TEEDYL +I+ KTA+L SAA + + G +
Sbjct: 132 MHLISTTSNVMSEGEVFQLIKCGEVNLTEEDYLKIIEKKTAILISAACALGGYLGGAEVH 191
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ALK +G+ LG AFQ+ DD LDY + GK IG+D GK TLP+I +R T E
Sbjct: 192 QIEALKQFGLRLGSAFQMTDDTLDYVAREEDFGKVIGKDLNEGKMTLPLIYTLKRCTPEE 251
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ F ++ + + + ++ + D +A + + + L LP+ K++
Sbjct: 252 RKFIETALAERRTREMPAGDILTLISRYDGITDALNQAETLIDEGRTFLAGLPEGPAKEA 311
Query: 310 LMEVVDFCLQR 320
L V +F L R
Sbjct: 312 LFAVSEFVLNR 322
>gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
Length = 336
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLTAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N +VL GDFL S+A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVASANARWDNSVAVLTGDFLFSRA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGTDETVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLAEDVALCELLDSDLTDDARHAEALRLLRAHPALEQARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L+E+ D + R
Sbjct: 313 APLPECDAKAALVELCDAVVHR 334
>gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
Length = 311
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 4/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLAC 69
ME + + S V ++ + Y++ GK++RPM A M+ D A
Sbjct: 1 MEDFEKRFRQSMSSQVALLNRITHYVVNRKGKQMRPMFVFLVAKMVSEGSVNDRTYRGAA 60
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE IHTATL+HDD+VDDS RRG + +W N+ +VLVGD+LLS+ + I+ +
Sbjct: 61 VIELIHTATLVHDDIVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDL 120
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +IK KTA L +A + + +
Sbjct: 121 LKIISVAVREMSEGELLQIEKARRLDITEDVYYDIIKKKTATLIAACCSLGAASVNPNSD 180
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I +K +
Sbjct: 181 DVTLMRLFGEKIGMAFQIKDDLFDYGNTA--IGKPTGIDIKEQKMTLPLIYTLNTVSKED 238
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K + +++ + + K ++EN L + + ++A L P S +K+S
Sbjct: 239 KRWLINSVKNHNKDKARVNKVIEFVKENGGLEYAVMQMKQFQKEALALLEKFPPSPYKES 298
Query: 310 LMEVVDFCLQRL 321
L +V++ ++R
Sbjct: 299 LELMVNYVIERK 310
>gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 322
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +M+ + + S V ++ + Y+I GK++RPM TA ML
Sbjct: 3 VQEILAPIETEMKLFEVRFHESMKSKVPLLDKITHYIIRRKGKQMRPMFLFLTAKMLGEV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTATL+HDDVVDD+ RRG + +W N+ +VLVGD++LS+
Sbjct: 63 NEKTYQSASLVELLHTATLVHDDVVDDANERRGFFSVNALWKNKIAVLVGDYMLSRVLLH 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E + AL+ ++ ++EGEL Q+ ++ LD+TEE Y VI + A + S
Sbjct: 123 SLENDNIRALQIVARAVREMSEGELLQIEKARKLDITEEVYFDVI-RQKTASLIATVCES 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + + ++++G +G+AFQ+ DD+ D G +GK G D R K TLP+I
Sbjct: 182 AAASVDREDMADRMRNFGELVGLAFQVKDDIFD-YGTPGNIGKPTGNDIRERKMTLPLIY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q K + + + + +++A ++ E + R +A L
Sbjct: 241 AMQHSDISVKKELLNIVKNHNEEKKYVQRAIQLVIEAGGIEYAHNRMIELKTEALSLLND 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+PDS K++L+ +V++ + R
Sbjct: 301 IPDSESKRALIGLVEYTVTR 320
>gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
Length = 327
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 3/313 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLAC 69
++ +V L+ + + S + + YL+ +GGKRLRP++ L + + V A
Sbjct: 13 ELRRVEDLLEEEVASREPALQEASLYLLRAGGKRLRPLVVLVSGRFGPRRDTEALVRAAA 72
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A+E IH ATL+HDDV+D S RRG+ + WG+Q ++ GDFL ++A ++ E + +
Sbjct: 73 ALEMIHMATLVHDDVIDRSDTRRGRPTVKAAWGDQLALYTGDFLFARALELLSEMEDRRL 132
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
E + + +GEL Q+ +D Y I+ KTA+L + + V + A
Sbjct: 133 HEVTAWAIARMCQGELEQMHDLYRIDQPLFRYYRRIRQKTALLMAVSCLVGARAAEADEE 192
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+AL +G +LG+AFQ+VDDVLD G+ MGK +G D G TLPV+ A + T +
Sbjct: 193 TARALWRFGGHLGMAFQIVDDVLDLVGDEAVMGKPVGSDLLQGNLTLPVLFALRGRTSGD 252
Query: 250 KNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + +S E+ + + E+ + + A Y A+ L LPD +
Sbjct: 253 EAASRRLAGRIHPGMSQEDAAEVVRAVAESGGIDEARRVAERYVTWARRDLAALPDGWAR 312
Query: 308 KSLMEVVDFCLQR 320
++L V+ F R
Sbjct: 313 EALEAVLGFVTAR 325
>gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
CJ2]
gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
CJ2]
Length = 327
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 134/311 (43%), Positives = 193/311 (62%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M ++ +I +R+ S+V ++ V +Y+I +GGKRLRP L L L+YRG LA +
Sbjct: 19 MRAMDAVIARRLQSEVPLVAQVSQYIIAAGGKRLRPALVLLMCGALDYRGAQRFNLAAVV 78
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++E ++
Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRSTANEIFGNPASVLVGDFLYSRAFQMMVEVGDMRIMQ 138
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE+ QL + +TE YL VI+SKTA LF A+ +++L+A +V
Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDAGLTEAGYLRVIRSKTAKLFEASARLAALLAQSSPAVE 198
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
Q YG LG AFQ++DDVLDY GEV EMGKN+G+D R GK TLP+I+A QRGT+ E+
Sbjct: 199 QHCAEYGQALGTAFQVIDDVLDYDGEVLEMGKNLGDDLREGKVTLPLIIAMQRGTQAERA 258
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G E + + I+++ AL T A + +A ++L+ LP + + +L
Sbjct: 259 TIRQAIETGGT--EQMAQVINIVQKTGALRATRDAAATEALRALNALQNLPQNPYSHALE 316
Query: 312 EVVDFCLQRLN 322
++ L R +
Sbjct: 317 QLASQLLARRS 327
>gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
Length = 321
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+D E VN LIL +I SDV ++ D+ +YLI +GGKRLRP+L L + L+Y+GD
Sbjct: 4 SFHQAVARDFEAVNQLILGQIHSDVGLVEDIGQYLIEAGGKRLRPLLVLLVSNALQYQGD 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H LA IEFIH+ATLLHDDVVD S LRRG++ A WGN SVLVGDFL S+AF M++
Sbjct: 64 KHHDLAAIIEFIHSATLLHDDVVDMSDLRRGRLTANAKWGNAPSVLVGDFLYSRAFQMMV 123
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ LS ++EGE++QL +K D++E+ Y VI KTA+LF AA E ++
Sbjct: 124 AVGDMSIMKILSDTTNLISEGEVQQLINAKKPDISEKGYFEVIHKKTAILFEAACETAAT 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++G + ++R+ L +YG ++GIAFQL+DD LDY G E+GKN+G+D GKPTLP+I A
Sbjct: 184 LSGAEETLRRQLTAYGYHVGIAFQLIDDALDYTGNTEELGKNVGDDLAEGKPTLPLIYAM 243
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + +I +G S L + I+R++ AL T A + A +L LP
Sbjct: 244 SNSSEEQSAMIADSIRNGDKS--QLSQIINIIRDSGALDYTLNLAKEHAMSAIKTLDALP 301
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS++K++++++ +F + R N
Sbjct: 302 DSTYKQAMIDLAEFSISRSN 321
>gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
G9241]
gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
4342]
gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
G9241]
gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
4342]
gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 320
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
Length = 320
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + + +K ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRKKITSVHENTTADEMKGIIEAVKNSDAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1271]
gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1271]
Length = 320
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILRKKITSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205]
Length = 323
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L +G+
Sbjct: 6 ELLQPVESDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALAPQGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LTSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V LA+GE++Q + + E YL KTA L + +
Sbjct: 126 HLANLDNLEVVKLLSRVIMDLADGEVKQGLYRYDTGQSFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ L +G LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGLPEDQLDCLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ I +L +A ++R + A+ + A ++ +A ++L
Sbjct: 246 YAL-----EERPALAGLIEREFNQDGDLAQALELVRGSEAIQRSRTLAETFANEAYEALS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S + +L+E+ +F L RL
Sbjct: 301 FLPPSDCRTALLELPEFVLSRL 322
>gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
Length = 323
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 165/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L KD+ ++ + K + + ++ ++L +GGKR+RP L L + D
Sbjct: 6 SLFAPVDKDLRLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPALVLLVSRATMLDQD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE++Q + +T E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEIQQGINLFDTGITLEAYLEKSYYKTASLMANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ V V + L +YG LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AAVLSDVPREVTEHLYNYGRYLGLAFQIVDDILDFTSPTEVLGKPTGSDLASGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E + + I +L+KA +++E+ + + A +Y Q A + L+
Sbjct: 246 YAM-----EENPYLEVLIEREFSEEGDLEKALQLVKESNGIELSRELASNYAQLALEHLK 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S + L ++VD+ L RL
Sbjct: 301 CLQPSPSSQVLADLVDYNLSRL 322
>gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
Length = 324
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 169/322 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++++ + S ++ V +Y++ GK++RP L + A +
Sbjct: 3 INEVTSSVAEELKLFQERYKTVLHSSNTLVDKVTRYVLRQQGKQIRPTLVILGAKVCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 GDVTYRGAIMVELLHSATLIHDDVVDGAEMRRGIPSINALWKNKISVLIGDYLLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E +L +S ++EGE+ Q+ +++LD+TEEDYL VI KT L + + +
Sbjct: 123 SLENSDYRSLHLVSEAVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A LK YG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I
Sbjct: 183 AASATDSEEEIARLKHYGEFLGLAFQIRDDLLDYTGDSKKTGKQLGIDIKDRKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ K E+N KS + K + + L A + KA +S+
Sbjct: 243 ALRQSDKAEQNKIKSILKSSKKRSVRSGEVIDFVTRKGGLEYAATVAEGFADKALESIAN 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+S ++SL +VDF ++R +
Sbjct: 303 FPESPARRSLELLVDFVMKRQH 324
>gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
13031]
gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
13031]
Length = 324
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 177/322 (54%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + ++E + + ++ V +Y++ GK++RP L L +A +
Sbjct: 3 IKDVTASVNDEIEIFQQRYKTVLYAQNTLVDKVTRYVLKQQGKQIRPALVLLSAQLCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 NESSYRAAIMVELLHSATLIHDDVVDGAEMRRGLASINALWKNKISVLIGDYLLSRGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E K L +S ++EGE+ Q+ +++LD++EEDYL VI KTA L S+A +
Sbjct: 123 SLEHKDYGFLHMVSEAVRRMSEGEILQIQKTRSLDISEEDYLSVISDKTASLISSACAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ + S +LKSYG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I
Sbjct: 183 AMSSTTDESAIASLKSYGEYLGLAFQIRDDLLDYTGDSKKTGKEMGIDIKDKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ E+ +S + + ++ LV + A KA S+
Sbjct: 243 ALSHASESEQKSIRSILKSAGKRASRSGEVVAFVKNKGGLVYSAEVAEGLAAKAVSSIAH 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+S+ K+SL+++VDF ++R N
Sbjct: 303 FPESTAKRSLLQLVDFVMKRDN 324
>gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
Length = 415
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 90/327 (27%), Positives = 162/327 (49%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + + D++ +N + + ++ + + +GGKR+RP + +
Sbjct: 93 LNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKRMRPAIVFLVSRATMQL 152
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA E IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+
Sbjct: 153 ARLNTIHLQHRRLAEITEMIHTASLIHDDVLDESDVRRGKETVHQLYGTRIAVLAGDFMF 212
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE++Q S + D+T ++YL KTA L +
Sbjct: 213 AQSSWYLANLDNLEVIKLISQVIKDFASGEIQQASSLFDSDITLDNYLDKSYYKTASLIA 272
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ +G SV + YG LG+AFQ+VDD+LD+ ++GK G D G
Sbjct: 273 ASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILDFTQSTAQLGKPAGSDLAKGNL 332
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P + A + + K I+ +L+ A +++ + A + A
Sbjct: 333 TAPALFALDKEPELRK-----LIDSEFTDEGSLESAVQLVKRGGGIDRAMELAKQKAELA 387
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP + + SL ++V++ L+R+
Sbjct: 388 IQALECLPVGAARSSLEKMVEYVLERV 414
>gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
27405]
gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
27405]
Length = 318
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 156/310 (50%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ + I K I S ++ + V ++ SGGKRLRP + + +Y +
Sbjct: 9 IEKELVLLEKFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPA 68
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDDVVD + RRG+V +G +V VGD+L ++A ++ +
Sbjct: 69 AAAIEILHTATLIHDDVVDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAGNVPE 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L L+ + EGE+ Q ++D + YL I KTAVLFSAA + + IA
Sbjct: 129 KRLSILAKGIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGAYIAKCP 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V ++L G+ G+AFQ+ DD+ +Y E K +G D G TLPVIL + +
Sbjct: 189 QEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKPVGNDILEGIITLPVILGLKLKPE 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ G ++ + + +++E+ + ++ Y +KA ++ LPD+ +K
Sbjct: 249 LREPLKNFLDKKGNVTEDEAARVVQLIKESGGVEESRVFLNKYVEKALKEIQNLPDNEYK 308
Query: 308 KSLMEVVDFC 317
K+ ++
Sbjct: 309 KAFERIIKAL 318
>gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 335
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 120/311 (38%), Positives = 177/311 (56%), Gaps = 5/311 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNHVLLACAI 71
V+ LI R+ SDV +I + ++++ +GGKRLRPML + +H LA I
Sbjct: 27 VDSLIRNRLASDVVLINQIAEHIVSAGGKRLRPMLVVLAGQATATSLGTTADHHQLAAII 86
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +++E E ++
Sbjct: 87 EFIHTSTLLHDDVVDESDLRRGRSTANAIWGNAASVLVGDFLYSRSFQLMVELDRMEVMQ 146
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE+ QL +N D E YL VI+ KTAVLF+A + +L + +
Sbjct: 147 ILADTTNRIAEGEVLQLLHVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADTQ 206
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QAL YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A +
Sbjct: 207 QALYDYGMALGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIHAITHSDPATRE 266
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + +G S + + + L + RA Y +A+ +L LP S ++L
Sbjct: 267 RLRQAVQEGDTSA--MPEVLAAIHATGGLEYSRKRAMDYAAEAEAALAGLPQSEALEALR 324
Query: 312 EVVDFCLQRLN 322
+ + ++R +
Sbjct: 325 GLARYAVERTH 335
>gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
Length = 415
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/327 (27%), Positives = 162/327 (49%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + + D++ +N + + ++ + + +GGKR+RP + +
Sbjct: 93 LNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKRMRPAIVFLVSRATMQL 152
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA E IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+
Sbjct: 153 ARLNTIHLQHRRLAEITEMIHTASLIHDDVLDESDVRRGKETVHQLYGTRIAVLAGDFMF 212
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE++Q S + ++T ++YL KTA L +
Sbjct: 213 AQSSWYLANLDNLEVIKLISQVIKDFASGEIQQASSLFDSEITLDNYLDKSYYKTASLIA 272
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ +G SV + YG LG+AFQ+VDD+LD+ ++GK G D G
Sbjct: 273 ASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILDFTQSTAQLGKPAGSDLAKGNL 332
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P + A + + K I+ +L+ A +++ + A + A
Sbjct: 333 TAPALFALDKEPELRK-----LIDSEFTDEGSLESAVQLVKRGGGIDRAMELAKQKAELA 387
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP + + SL ++V++ L+R+
Sbjct: 388 IQALECLPVGAARSSLEKMVEYVLERV 414
>gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 336
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S+V I + ++L+ +GGKR RP+L + + +
Sbjct: 14 QALEADVQAGLAAVEAGLLDATKSEVPFITEAAQHLVSAGGKRFRPLLVMLASQFGDPDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVDSANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + Y+ V+ KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYMDVLGGKTGSLVAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG SV L YG LGIAFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 LMAGADESVVDILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLHL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
R K + DG + L +A +R + AL Y Q+A+ +L
Sbjct: 253 RARAAAGGSPEDKELVELLDGDLADDARLAEALRRLRAHPALEQARRDTVRYAQEARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 APLPECYAKAALEELCDAVVHR 334
>gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 322
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 116/320 (36%), Positives = 187/320 (58%), Gaps = 2/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + ++ +V ++ SD +IP + Y+I SGGKRLRP+ L +A + YR
Sbjct: 4 QDIFKTYEAELREVEKELINIFKSDATLIPTIGAYIINSGGKRLRPLFLLISADLAGYRE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V++A IE +HTA+LLHDDVVD++ LRRG+V+A +WGNQ +VL+GD+L ++A +
Sbjct: 64 YKRVIMAAVIEALHTASLLHDDVVDEAELRRGQVSANRIWGNQVTVLLGDYLYAKALHVS 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S + +EALS +AEGE+ QL + + +T +Y+ +I KTA L AA ++
Sbjct: 124 VAQESLQIMEALSWATSQMAEGEILQLMKAGDPTITFNEYIKIITGKTAGLIRAACRIAG 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + QAL +G N+G+AFQ++DD+LDY + +E+GK +G+D GK TLP+I
Sbjct: 184 ILAKLSEEKIQALTDFGHNIGVAFQMIDDILDYVADESELGKKLGKDLMEGKITLPLIEL 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ +E+ I S ENL K +R+ + + +Y KAK +L
Sbjct: 244 IKKTQGKEEIINT--IKSDGFSEENLLKILNYLRQYNCIESSMEIVKNYVDKAKKALEIF 301
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS ++ L + D+ L R
Sbjct: 302 PDSDARQRLFRIADYILLRS 321
>gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
2360]
gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
2360]
gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
Length = 318
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 156/310 (50%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ + I K I S ++ + V ++ SGGKRLRP + + +Y +
Sbjct: 9 IEKELVLLEEFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPA 68
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDDVVD + RRG+V +G +V VGD+L ++A ++ +
Sbjct: 69 AAAIEILHTATLIHDDVVDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAGNVPE 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L L+ + EGE+ Q ++D + YL I KTAVLFSAA + + IA
Sbjct: 129 KRLSILAKGIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGAYIAKCP 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V ++L G+ G+AFQ+ DD+ +Y E K +G D G TLPVIL + +
Sbjct: 189 QEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKPVGNDILEGIITLPVILGLKLKPE 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ G ++ + + +++E+ + ++ Y +KA ++ LPD+ +K
Sbjct: 249 LREPLKNFLDKKGNVTEDEAARVVQLIKESGGVEESRVFLNKYVEKALKEIQNLPDNEYK 308
Query: 308 KSLMEVVDFC 317
K+ ++
Sbjct: 309 KAFERIIKAL 318
>gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 336
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE M V +L+ S+V I D ++L+ +GGKRLRP+L + A +
Sbjct: 14 QALEADVQAGMAAVEAGLLEATKSEVSFITDAAQHLLKAGGKRLRPLLVMLAAQFGDPDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V +E H ATL HDDV+D++ +RRG +A W N +VL GDFL ++A +
Sbjct: 74 PGIVPSGVVVELTHLATLYHDDVMDEAEVRRGVPSANARWDNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + A +
Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQIMETAGPRDGRDPVDHYLDVLGGKTGSLIAVAGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G V L YG LG+AFQL DDVLD + +E GK G D R PTLPV+L
Sbjct: 193 MMSGADERVVDILTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLRESVPTLPVLLL 252
Query: 242 FQRGTKREKNFW---KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
R + E+ + ++ +A MR + AL Y ++A+ +L
Sbjct: 253 RDRARREERPEDLALVALLDSDLTDDARHAEALAAMRAHPALEQARRETVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + S K +L+E+ D + R
Sbjct: 313 TPLRECSAKAALVELCDAVVHR 334
>gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
Length = 321
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 159/321 (49%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M +L+ ++ +N + + + + +++ +GGKRLRP+LT+ A +L Y
Sbjct: 1 MLLLKARLALELPPINKALSRAAEGLPHPVRPIARHIFEAGGKRLRPLLTILMARLLGYD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA +E +H ATLLHDDV+D++ RRGK AA ++ +++L GD +L+ A +
Sbjct: 61 KKDIYDLAVTMEMLHAATLLHDDVLDNADTRRGKPAAHTIFNATSTILAGDAMLAHANAL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + S A GE+ +++ ++ T E+Y +I+ KTA L A+ ++
Sbjct: 121 VAQCGDPRLCLCFSEATSRTAAGEILEIAAQHQVETTAEEYEEIIRGKTAWLIRASCQLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG ++ +A +YG N+G+AFQ+VDD LD + GK G D R GK T P+ +
Sbjct: 181 ALRAGADEALVEAAAAYGENIGMAFQIVDDALD-FAPQSVTGKPSGGDVREGKLTPPLRM 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + ND + + ++ +R T A Y KA+ +L
Sbjct: 240 YRDSLDDAARAAFDQAFNDASFTDGDAERIADSIRAAGFDQATRMAAEGYLDKARAALAS 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP + L ++ D+ R
Sbjct: 300 LPSGPEQDILQQMADYVRDRK 320
>gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 336
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVHNGLSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYS 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPAAVVMELTHLATLYHDDVMDEADVRRGVPSANARWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + + E YL VI KT L + + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPREGGDPIEHYLDVIGGKTGSLIAVSGRIGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG + L YG LG+AFQL DDVLD +E GK G D R G PTLPV+
Sbjct: 193 MMAGADERIVDTLTQYGERLGVAFQLADDVLDIASHSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + + + L + R++ AL Y Q+A+ +L
Sbjct: 253 RERAKATGEAADRELVELLDGDLADDDRLAEVLRRFRDHPALEQARRDTVRYAQEARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K +L E+ D + R
Sbjct: 313 APLPDCPAKAALEELCDAVVHR 334
>gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Thiomonas sp. 3As]
Length = 336
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 121/316 (38%), Positives = 186/316 (58%), Gaps = 2/316 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+DME+V+ I + S+V +I + Y++ GGKRLRP L L + L +RG
Sbjct: 22 APITEDMERVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQH 81
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
++A +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++
Sbjct: 82 IMAAVVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVG 141
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L+ L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A
Sbjct: 142 SMRILDILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLAD 201
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++G
Sbjct: 202 ADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQG 261
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T ++ ++ I G S L I+ A+ A + A+ +L L S
Sbjct: 262 TAAQRTLIENAIRQGDTSA--LDDVMDIVHACGAMQAVRKAAQGEIRVAECALSPLAPSP 319
Query: 306 WKKSLMEVVDFCLQRL 321
+++L+++ + L R
Sbjct: 320 ARQALLDLCAYSLGRT 335
>gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
11109]
gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
11109]
Length = 325
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 115/320 (35%), Positives = 182/320 (56%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
KM+ D++++N + + + V +I +V +++ SGGKR+RP+L + A M RG
Sbjct: 6 KMILQRLQPDIDRINLALSGNLATHVRLISEVWDHILISGGKRIRPLLFILAARMCGCRG 65
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ + E++H ATLLHDDVVD + RRG+ +A +WGNQ +LVGDFLLS+A +
Sbjct: 66 DHLPDIGAIFEYLHAATLLHDDVVDAATERRGQSSANTIWGNQAVILVGDFLLSKALSIA 125
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ET+ +E L+ +AEGE+ QL + L++TEE+Y VI KTA L SAA ++ +
Sbjct: 126 VETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLEMTEEEYFDVITRKTAKLMSAACQIGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ GV + A+ +G+NLGI FQL+DD+LD+ G EMGK I D + GK TLP I
Sbjct: 186 ILGGVDGRLEAAMADFGLNLGITFQLIDDILDFTGNAKEMGKPICNDLKEGKITLPFIHT 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ E+ + + + ++ +M+ + ++ A Y AK++L
Sbjct: 246 LRQLGPTEQQSLGHLVRESDAARIA-QELLPLMQRHGSIDYARRLAQEYTNAAKENLALF 304
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P S K +EV D + R
Sbjct: 305 PSSPEKSLFLEVTDILVNRT 324
>gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
Length = 325
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60
+++ +ME + S V ++ + Y++ GK++RPM TA M+
Sbjct: 6 QIKEPIAYEMELFEEKFALSMRSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNSGEV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A IE IHTA+L+HDDVVDDS +RR + +W N+ +VLVGDFL S+ +
Sbjct: 66 NDRTYRGASVIELIHTASLVHDDVVDDSNMRRSFFSLNALWKNKIAVLVGDFLFSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A +
Sbjct: 126 SIDNGDTDLLQIISVAVREISEGELLQIEKARKLDITEELYYEIIRQKTATLIAACCAMG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + + +G +G+AFQ+ DD+ DY ++GK G D + K TLP+I
Sbjct: 186 AQAVHAKGKEVKRMHKFGELIGMAFQIKDDLFDY--GSEKIGKPTGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+K+EK++ ++I + + +K+ +++N L + + Q+A + L
Sbjct: 244 VLNTVSKKEKDWLINSIKNKNTDKKRVKEVIAFVKDNGGLDYAILKMKALQQEALEILMT 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S ++ SL +V++ + R
Sbjct: 304 YPQSVYRDSLELMVNYVIDRK 324
>gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1]
Length = 321
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 174/320 (54%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L+ + + + N + + + ++ V +++ +GGKRLRP+LTL A L Y
Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LAC++E +H+ATLLHDD++DD+ LRRG AA V+G+ +VL GD LL+ A +
Sbjct: 61 DDDIYPLACSVELLHSATLLHDDILDDADLRRGMAAAHTVFGSTATVLAGDALLALANLI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +S A GE+ +++ + D + Y+ +I KTA + A+ E+
Sbjct: 121 VARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGRDTYIDIITGKTAWMLRASCELG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +A ++G++LGIAFQ+VDD LD + + GK +G D R GK T P+I
Sbjct: 181 ALRAGASEEAVRAAAAFGLDLGIAFQIVDDALD-FADRADTGKPVGGDLREGKLTPPLIY 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ + S DG S +++ + +R + T A +Y +KA SL
Sbjct: 240 YLETLSGPEREAFISRFRDGGFSGDDVARISAEIRALGIIERTRELAGNYIEKAAASLET 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD +++LM+ + + R
Sbjct: 300 LPDCPERRTLMQTLAYVQHR 319
>gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9211]
gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9211]
Length = 323
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKR+RP + L + L G+
Sbjct: 6 ELLQPVEIDLEHLLTDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSVDGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVPTVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA+GE++Q + + YL KTA L + + +
Sbjct: 126 HLANLNNLDVVKLLSRVIMDLADGEIKQGLYRFDAGQSFSTYLEKSYCKTASLIANSSQA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + +L +G LG+AFQ+VDD+LD+ G ++GK D +G T PV
Sbjct: 186 VGVLNDLPKEKLNSLYHFGKQLGLAFQVVDDILDFTGNDKQLGKPAASDMASGYITAPVF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + E I S +L+ A I+R ++A+ + + A S +++ ++L
Sbjct: 246 YAIEENPSLEA-----LIVREFSSQGDLENALEIVRNSKAIARSRHLAESLAKESHEALN 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +++L+E+ +F L RL
Sbjct: 301 WLPDSPSQQALLELPNFVLSRL 322
>gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
Length = 338
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 162/322 (50%), Positives = 224/322 (69%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + LT +DM +VN LIL S VE+IP++ +LI SGGKRLRPMLT+A+AL Y
Sbjct: 16 IDTIVTLTQRDMGRVNDLILSMAGSRVELIPEIANHLISSGGKRLRPMLTIASALAHGYE 75
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD HV LA ++EF+HTATLLHDDVVD+S LRRG+ AR +WGNQ SVLVGD+LL QAF
Sbjct: 76 EGDAHVKLAASVEFMHTATLLHDDVVDESDLRRGRRTARTIWGNQASVLVGDYLLGQAFK 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M+++ S AL LS + +AEGE+ QL+ +K + +E DYL V+ +KTA LF+AA EV
Sbjct: 136 MMVDVGSMAALAILSDASAVIAEGEVWQLAAAKRMTTSEADYLSVVDAKTAALFAAAAEV 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+IAG R+A++ YG +LGI+FQL+DDVLDY G ++GKN G+DFR GK TLPVI
Sbjct: 196 GPVIAGKSMREREAMRRYGRSLGISFQLIDDVLDYGGVATDLGKNTGDDFREGKITLPVI 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA++ G+ EK FW+S + +G+ L KA ++ + L T RA +YG +A ++
Sbjct: 256 LAYEAGSDEEKAFWRSAMEEGRNDDLALAKAVDLIDRHGTLKATIDRARAYGAEAYEAAA 315
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S +++L++VV+FC+ R+
Sbjct: 316 SLPPSLAREALLDVVEFCVARI 337
>gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 346
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++V + + S ++ + ++L+ +GGKR RP+L A + D V A +
Sbjct: 36 LDRVETNLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTDQVVPAAVVM 95
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D++A+RRG +A W N ++LVGD+L ++A + + +
Sbjct: 96 ELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADIAADLGPEAVRL 155
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + ++ YLHVI KT L + + + G
Sbjct: 156 QARTFARLVHGQIA--ETVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHV 213
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--VILAFQRGTKRE 249
+AL YG +G+AFQL DD+LD E + GK G D R G PTLP +A
Sbjct: 214 EALAEYGEIIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLYAMASDDADAAS 273
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + +A ++RE+ AL SY + A+ L LP+ +++
Sbjct: 274 VRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARARLAPLPEGPARRA 333
Query: 310 LMEVVDFCLQRLN 322
L + D+ R +
Sbjct: 334 LESLCDYIADRTS 346
>gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH187]
gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH187]
Length = 320
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSYTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus
donghaensis MPA1U2]
gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus
donghaensis MPA1U2]
Length = 324
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K+L ++E + + + + S ++ D +L+ +GGKR+RP+ L Y
Sbjct: 6 LKLLYSDLKPELEMIEKELEQAVDSKSLLLNDASLHLLQAGGKRIRPVFVLLAGKFGNYN 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A +E IH A+L+HDDV+DDS +RRG+ + W N ++ GDF+L++A
Sbjct: 66 VDVMKQVAVPLELIHMASLVHDDVIDDSEIRRGQPTVKAQWNNSVAMYTGDFILARALEH 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E +S E LS + GE+ Q+ LD DY IK KTA+L S++ E+
Sbjct: 126 ITEIESPRVHEILSKTLIEVCRGEIIQIQDKYRLDQNLRDYFRRIKRKTALLISSSCELG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L++G L+ +G +G++FQ++DD+LD+ E+GK G DF G TLP++
Sbjct: 186 ALVSGTDEKTAAHLRRFGYFIGMSFQIIDDILDFTSTDEELGKPAGSDFIQGNITLPILC 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + +S E K +R + + + + + Y QKA L
Sbjct: 246 AR---KDPELYAMLKANLNKDLSNEERFKVVEAIRNSSGIEEAKAMSERYLQKALRELSF 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K++ ++ F +R
Sbjct: 303 LPKGQGVKTMRKIAFFIGKRK 323
>gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
Length = 325
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
++ ++ +ME + S + ++ + +++ GK++RPM A M+
Sbjct: 4 VEQIKAPVAHEMELFEKKFQLAMASRIALLNRITHFIVNRKGKQMRPMFVFLVAKMIGDG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 64 EVNDRTYRGASVIELIHTATLVHDDVVDDSLKRRGFFSVNALWKNKIAVLVGDYLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A
Sbjct: 124 LLSIDNGDFDLLQIISVAVREMSEGELLQIEKARRLDITEEVYYDIIRKKTATLIAACCS 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + ++ +G +GIAFQ+ DD+ DY +GK G D + K TLP+
Sbjct: 184 LGACAVSPGSQDVEKMREFGEMIGIAFQIKDDLFDY--GNERIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I Q +K+++ + +++ + +K+ ++ N L Y Y +A L
Sbjct: 242 IHTLQIASKKDRKWLINSVKKHNRDKKRVKEVIDFVKNNGGLEYAVKAMYDYRDRAMSIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
PDS +K+SL +V++ + R
Sbjct: 302 NTYPDSEYKRSLELMVEYVIDRK 324
>gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-28]
gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-28]
Length = 320
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 87/321 (27%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 VTNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILRKKITSVHENTTASEMKEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 323
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---N 63
D+E++ + + + + ++ ++L +GGK +RP + L A G+
Sbjct: 10 PVEADLERLRQNLSRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPQ 69
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA E IHTA+L+HDDV+D + +RRG ++ N+ +VL GD+L QA +
Sbjct: 70 HWRLAEITEMIHTASLVHDDVIDTADVRRGIDTVNTLFDNRVAVLAGDYLFGQAAWYLAN 129
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ E ++ LS V L EGE+RQ + DV+ E+YL KTA L S + + + L+
Sbjct: 130 LDNLEVVKLLSKVIMDLPEGEVRQSLTRFDPDVSLEEYLAKSFYKTASLISGSSKAAGLL 189
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+GV V L +G +LGIAFQ+VDD+LD+ +GK +G D G T PV+ A
Sbjct: 190 SGVSPEVADRLFDFGRDLGIAFQIVDDLLDFTASAEMLGKPVGSDLIQGNLTAPVLFAL- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E + I ++L++A + ++ + + A Y ++A ++L LPD
Sbjct: 249 ----EEFPQMRELILRELAEPQDLQQALEWVYQSNGIPRSRELARDYARRAAEALEVLPD 304
Query: 304 SSWKKSLMEVVDFCLQR 320
S +++L ++VD+ L+R
Sbjct: 305 SVARRALFQMVDYVLER 321
>gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
Length = 323
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEY 59
L D++ + + + I + ++ +L +GGKRLRP + L + +
Sbjct: 6 SLFAPVEADLQLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQE 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S+LRRG + N+ +VL GDFL +QA
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ S ++ LS V LAEGE+ Q + ++ E YL KTA L + +
Sbjct: 126 HLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRFDSSLSIEVYLDKSYYKTASLLANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+S+++G +V AL YG +LG+AFQ+VDD+LD+ G +GK G D +G T P +
Sbjct: 186 ASVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTGSEEVLGKPAGSDLASGNLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I ++ ++A ++ ++ L T A + QKA +L
Sbjct: 246 YAI-----EEHPALVPLIEREFSQAQDFEQAIALVHNSQGLARTRALAAEHAQKAVQALD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S K++L+ + + L RL+
Sbjct: 301 VLPASDCKETLISLTSYVLSRLS 323
>gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Ames]
gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. 'Ames Ancestor']
gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0488]
gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0442]
gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0193]
gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0465]
gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0389]
gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0174]
gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
Tsiankovskii-I]
gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
NVH0597-99]
gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB108]
gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
H3081.97]
gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH820]
gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1]
gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB102]
gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CDC 684]
gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1293]
gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0248]
gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CNEVA-9066]
gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A1055]
gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Western North America USA6153]
gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Kruger B]
gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Vollum]
gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Australia 94]
gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
CI]
gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Ames]
gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. 'Ames Ancestor']
gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0488]
gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0193]
gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0442]
gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0389]
gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0465]
gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0174]
gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
Tsiankovskii-I]
gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB108]
gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
NVH0597-99]
gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
H3081.97]
gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH820]
gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1]
gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB102]
gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CDC 684]
gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1293]
gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0248]
gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
biovar anthracis str. CI]
gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 320
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
B4264]
gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
172560W]
gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
10876]
gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171]
gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
B4264]
gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
10876]
gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
172560W]
gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171]
Length = 320
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGKAKYALQNVAKYIGKRK 319
>gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-29]
gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-3]
gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-3]
gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-29]
Length = 320
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 VTNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG + L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDMVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPILRKKITSVHENTTASEMKEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
Length = 325
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 174/322 (54%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEY 59
++ L++ME + + S + ++ + Y++ GK++RPM TA M
Sbjct: 5 SQIKKPILEEMELFEKKFQQSMSSKIALLNRITYYVVNRKGKQMRPMFVFLTAKMISGGT 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 65 VLERTYRGALVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLL 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A +
Sbjct: 125 LSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCAL 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I
Sbjct: 185 GAQSVSNDEVQVEKMRKFGELIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
T +EK++ ++I + + +K+ ++ N L E++ + Q+A L+
Sbjct: 243 HVLNNCTAKEKSWLINSIKNYNKDKKRVKEVITFVKNNSGLAYAEHKMRQFQQEALSLLQ 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P+S++K SL+ +V++ ++R
Sbjct: 303 DFPNSTYKDSLILMVNYVIERK 324
>gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50]
Length = 286
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 122/285 (42%), Positives = 173/285 (60%), Gaps = 1/285 (0%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
Y++ GGKR+RPM+ + A + Y G+ HV +A IEFIHTATLLHDDVVD+S +RRGK
Sbjct: 1 YIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKA 60
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A +GN SVLVGDF+ ++AF M+ S + LE +S +AEGE+ QL + D
Sbjct: 61 TANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPD 120
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+TEE+Y+ VI SKTA LF AA + S ++AG + L+ YG LG AFQL+DD+LDY
Sbjct: 121 ITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYN 180
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ ++GKN+G+D GKPTLP++ A GT + ++ I G L+ M
Sbjct: 181 ADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMN 239
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+L T RA KA +L+ LPD+ W+++L+ + +QR
Sbjct: 240 ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQR 284
>gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
Length = 323
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 101/323 (31%), Positives = 160/323 (49%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEY 59
L D++ + + + I + ++ +L +GGKRLRP + L + +
Sbjct: 6 SLFAPVEADLQLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQE 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S+LRRG + N+ +VL GDFL +QA
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ S ++ LS V LAEGE+ Q + ++ E YL KTA L + +
Sbjct: 126 HLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRFDSSLSIEVYLDKSYYKTASLLANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G +V AL YG +LG+AFQ+VDD+LD+ G +GK G D +G T P +
Sbjct: 186 AGVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTGSEEVLGKPAGSDLASGNLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I ++ ++A ++ ++ L T A + QKA +L
Sbjct: 246 YAI-----EEHPALVPLIEREFSQAQDFEQAIALVHNSQGLARTRALAAEHAQKAVQALD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S K++L+ + + L RL+
Sbjct: 301 VLPASDCKETLISLTSYVLSRLS 323
>gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus
weihenstephanensis KBAB4]
gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
2048]
gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH603]
gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST196]
gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH621]
gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus
weihenstephanensis KBAB4]
gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH621]
gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST196]
gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH603]
gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
2048]
Length = 320
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + +A +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPDAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLPV+
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPVL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENTTASEMKEIIDDIKASEAIDKAFSFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9916]
gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9916]
Length = 323
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGK++RP + L + L G+
Sbjct: 6 ELLQPVELDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKKIRPGIVLLVSRALSPEGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + ++ +VL GDFL +QA
Sbjct: 66 LTARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E ++ LS V LA+GE++Q + + E YL KTA L + +
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTGQSFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ +L +G LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSEQTPDRLDSLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK S I +L++A ++R + A+ + A ++ ++A++SL
Sbjct: 246 YAL-----EEKPALGSLIEREFSEEGDLQQALELVRASDAIQRSRALAETFAREARESLE 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S +++L+++ +F L RL
Sbjct: 301 WLPESPCRRALLDLPEFVLSRL 322
>gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
Length = 323
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKR+RP + L + L G+
Sbjct: 6 ELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAADGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTQRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LA+GE++Q + + E Y KTA L + +
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTSQSFETYFEKSYCKTASLIANSSRA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ +L +G LG+AFQ+VDD+LD+ G ++GK D G T P
Sbjct: 186 AGVLSECNPQQLDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLATGYLTAPTF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + + + I+ +L++A ++R ++A+ T A + +++++S+
Sbjct: 246 YALEENPEL-----GTLIDREFSEAGDLEQALELVRSSQAIPRTRELAEKFARESRESIA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ DS K++L+E+ DF L RL
Sbjct: 301 WMADSPSKRALLELPDFVLSRL 322
>gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 4222]
gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 4222]
Length = 320
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQQITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 374
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 101/327 (30%), Positives = 169/327 (51%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + DME++ + I ++ + +GGKRLRP+L A
Sbjct: 53 ITQITAPVNADMEQMRMNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAIK 112
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ D LA E IHTA+L+HDDV+DD RRGK ++G + ++L GDFL
Sbjct: 113 MNMSDITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRGKETIHTLYGARVAILAGDFLF 172
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A+GE+ Q N D+T ++Y+ +KTA L +
Sbjct: 173 AQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALFNCDITLDEYMEKSHNKTASLIA 232
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +S+ + + SV+ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G
Sbjct: 233 ASCKSASVFSECEESVKIDMYEYGKHLGLAFQVVDDILDFTQSEEQLGKPQGQDLASGNL 292
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P I A +R + + I + +L++A I+ E+ + + A G A
Sbjct: 293 TAPTIFALKRVPEL-----RGLIENQFEKEGDLQRAIDIVNEHG-IAEARKLAKREGDIA 346
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
SLR LPDS K+SL+ +V + L+R+
Sbjct: 347 LASLRQLPDSDAKRSLVGMVGYVLERI 373
>gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 200]
gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 200]
Length = 320
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPALRQKIISVHENTTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
Length = 324
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 169/321 (52%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++ +M + + + S V ++ ++ Y++ GK++RPM +A +
Sbjct: 5 IKEIQSPIATEMAEFEIKFRQFMKSKVYLLDKIMGYIVKRKGKQMRPMFVFLSAGVHGQI 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE +HTATL+HDDVVDD+ RRG + +W N+ ++LVGD+LLS+ +
Sbjct: 65 NEATYRGAALIELLHTATLVHDDVVDDANYRRGFFSINALWKNKIAILVGDYLLSRGLLL 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + + L+ +S ++EGEL Q+ ++ L++TE+ Y +IK KTA L ++ V
Sbjct: 125 SIDNEDFDLLKIVSEAVREMSEGELLQIEKARKLNITEDIYYDIIKQKTASLIASCCAVG 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S + + + +K +G +G+AFQ+ DD+ D N++GK +G D + K TLP+I
Sbjct: 185 SRSVNKDDDISEKMKLFGEKVGMAFQIKDDLFD--YGTNDIGKPLGIDIKEKKMTLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A K E+ I + +K ++ + E +Y +A ++
Sbjct: 243 ALNNADKSEQKQIIKLIKNKSDKNSTVKTVVDFVKNKNGIAYAEEVMQNYYDEAMTIIKD 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P + +++SLM++V + ++R
Sbjct: 303 FPKTEYRQSLMDLVKYTIERK 323
>gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM
265]
gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265]
Length = 324
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 175/322 (54%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +++ + + + ++ V +Y++ GK++RP++ L +A +
Sbjct: 3 INDVTAPVAEELVLFRQKYRELLRNQNSLVDKVTRYVLRQQGKQIRPVMVLLSASVAGGI 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 RESSYRGAIMVELLHSATLIHDDVVDGAEMRRGIASINAIWKNKISVLIGDYLLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E+K L +S ++EGE+ Q+ +++LD++EEDY+ VI KTA L +++ +
Sbjct: 123 SLESKDYGFLHIVSDAVRRMSEGEILQIQKTRSLDISEEDYIRVISDKTASLIASSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A A+K YG +LG+AFQ+ DD LDY G+ + GK +G D R+ K TLP+I
Sbjct: 183 AESATEDEVKIAAMKKYGESLGLAFQIRDDTLDYTGDSRKTGKEMGIDIRDRKITLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E+ +S + + + + + +R L A Y +A ++L
Sbjct: 243 ALSKASPAEQRRVRSILKNSRKRSQLRGEVMDFVRRMGGLDYAGAVAEGYAAEAVEALDV 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS KK+L+ +VDF + R +
Sbjct: 303 FGDSEAKKALLNLVDFVMNRQH 324
>gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 332
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 177/311 (56%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M V + + V + ++ Y++ GGKRLRP+L + ++ + G +LLA
Sbjct: 20 DQMAAVEEKLHAILTGIVPLASEMTSYVVSGGGKRLRPLLMVISSRLSGAEGPEPILLAA 79
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E IHTATLLHDDVVD++ +RRGK AA WGNQ ++LVGDFL + + + + S E
Sbjct: 80 VVEMIHTATLLHDDVVDNADVRRGKKAAHQRWGNQPAILVGDFLYANSLWLAMGLHSHEV 139
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++L+L ++EGE+ +L L NL+ TE+ Y +V KTA L ++ + ++ G+ +
Sbjct: 140 NDSLTLACKKMSEGEILELFLDGNLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDE 199
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++AL +G +G+AFQ+ DD LDY ++GK +G D GK TLP+I +
Sbjct: 200 EKEALDRFGYYVGMAFQVADDALDYMASEEKLGKTLGRDLSEGKMTLPLIHCLATSSAES 259
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
++ + + G+I +L + +M++ ++ + RA + +KA++SL C S K+
Sbjct: 260 RSRLVTKVGSGEIRNGDLDEVLRLMKDTGSIEYSLGRAREFTRKAQESLECFSHSLPKQH 319
Query: 310 LMEVVDFCLQR 320
L+ + DF + R
Sbjct: 320 LLALSDFVISR 330
>gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
Length = 321
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 174/320 (54%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L+ + + + N + + + ++ V +++ +GGKRLRP+LTL A L Y
Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LAC++E +H+ATLLHDD++DD+ LRRG AA V+G+ +VL GD LL+ A +
Sbjct: 61 DDDIYPLACSVELLHSATLLHDDILDDADLRRGMAAAHTVFGSTATVLAGDALLALANLI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +S A GE+ +++ + D + Y+ +I KTA + A+ E+
Sbjct: 121 VARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGRDTYIDIITGKTAWMLRASCELG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +A ++G++LGIAFQ+VDD LD + + GK +G D R GK T P+I
Sbjct: 181 ALRAGASEEAVRAAAAFGLDLGIAFQIVDDALD-FADRADTGKPVGGDLREGKLTPPLIY 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ + S DG S +++ + +R + T A +Y +KA SL
Sbjct: 240 YLETLSGPEREAFISRFRDGGFSGDDVARISAEIRTLGIIERTRELAGNYIEKAAASLET 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD +++LM+ + + R
Sbjct: 300 LPDCPERRTLMQTLAYVQHR 319
>gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia
stuttgartiensis]
Length = 323
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 103/320 (32%), Positives = 177/320 (55%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + M++V K + + D+V ++ GKRLRP LTL + +
Sbjct: 4 EDIFASIEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTA 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H+ LA +E +HTATL+HDD++D++A+RR + WG + S+L GD+L S+ F ++
Sbjct: 64 PQHIDLAVVVEMVHTATLVHDDIIDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTIL 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
SQ A LS T+ EGEL QL ++ ++EEDY+ +I+ KTA L + + + +
Sbjct: 124 SALDSQIATLLLSQTVNTMCEGELIQLKRRYDVGLSEEDYIDIIEKKTASLCATSCRLGA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG + + + + +YG+ +G AFQ++DD LD+ G+ +E+GK++ D + GK TLP+I
Sbjct: 184 TFAGANHKLSEMMSNYGLKIGTAFQIIDDCLDFMGDEDEVGKSLNTDIKKGKLTLPLIRL 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ K I G + E ++ E+ A+ RA S ++A+D + L
Sbjct: 244 VHQLPVSKRESTKELIFKGHLD-EKKDAIVELLTEHDAVEYAFDRARSIVKQAQDVIAPL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS +K +L+E+ D+ + R
Sbjct: 303 PDSQYKTALIELADYIIARK 322
>gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Sterne]
gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Sterne]
gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 323
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 6 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 66 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 126 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 186 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 245 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 302 LPRGQAKYALQNVAKYIGKRK 322
>gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
G9842]
gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar sotto str. T04001]
gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
G9842]
gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 320
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLRQKITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus abyssi GE5]
gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate
synthase [Pyrococcus abyssi GE5]
Length = 346
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + + V+ + + I ++ + ++ +GGKR+RP + L +
Sbjct: 9 DELFNRIKERAKLVDEKLFELIPEKEPKVLYEAARHYPLAGGKRIRPFVVLTATEAVGGN 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ A AIE IH +L+HDD++D RRGK VWG ++L GD L S+AF
Sbjct: 69 ALKAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHKVWGINMAILAGDLLFSKAFEA 128
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ K + LE + + L EG+ L V+ E+Y+ +I KT LF A
Sbjct: 129 ISRAEISPEKKAKVLETIVKASNELCEGQALDLEFENREMVSIEEYMRMISGKTGALFDA 188
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ +V ++ +AL +G N+G+AFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 189 SAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKT 248
Query: 236 LPVILAFQRGTKREKNFWKSTIND-----------GKISVENLKKAFIIMRENRALVDTE 284
L V F+ ++ K + + + +A +++E+ ++
Sbjct: 249 LIVAHFFENADEKAKEKFLKVFGKYAGDVKGKGIIEEDVKAEVMEAIELLKEHGSIDYAS 308
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +KA ++L LP+S +K L + F ++R
Sbjct: 309 RIARELVEKANEALNVLPESRARKDLELLASFMVER 344
>gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 346
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++V + + S ++ + ++L+ +GGKR RP+L A + D V A +
Sbjct: 36 LDRVETSLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTDQVVPAAVVM 95
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D++A+RRG +A W N ++LVGD+L ++A + + +
Sbjct: 96 ELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADIAADLGPEAVRL 155
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + ++ YLHVI KT L + + + G
Sbjct: 156 QARTFARLVHGQIA--ETVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHV 213
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--VILAFQRGTKRE 249
+AL YG +G+AFQL DD+LD E + GK G D R G PTLP +A
Sbjct: 214 EALAEYGEIIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLYAMASDDADAAS 273
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + +A ++RE+ AL SY + A+ L LP+ +++
Sbjct: 274 VRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARARLAPLPEGPARRA 333
Query: 310 LMEVVDFCLQRLN 322
L + D+ R +
Sbjct: 334 LESLCDYIADRTS 346
>gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797]
gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797]
Length = 330
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +E+L ++E+ + L + S + DV++++ GKRLRP+L L +A
Sbjct: 11 LARVEELIGGELEQAERVFLSEVSSKHPYVHDVLQHITRFQGKRLRPILLLLSAAATGGI 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++H +LA +E IH ATL+HDDV+DD+ +RR W N+TSVLVGDFL + AF +
Sbjct: 71 NESHYVLASVVEMIHLATLVHDDVLDDALIRRHVATVNSRWNNETSVLVGDFLFTHAFHL 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A + + EGEL Q+ N +++EE YL +I KTA L + + ++
Sbjct: 131 TASLGDARACRLIGRATNLVCEGELAQIYERGNHELSEEQYLEIINGKTAELCAISTQLG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A S+ +A+ YG LG+AFQ+ DD+LD G+ +MGK++G D + K TLP+I
Sbjct: 191 ALYASADESIVEAMDEYGRALGVAFQITDDLLDLLGDEEQMGKSLGSDLQKEKLTLPLIR 250
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + ++ + ++ ++ ++ + A+ RA + ++A++SL+
Sbjct: 251 LLDQCSPEDRATIQEILSQP--DPNTKQRLIQYIKNSDAIDYAGNRAREFAKQARNSLQN 308
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S ++ L E+ +F +QR
Sbjct: 309 CPASPARQILEELTEFAIQRT 329
>gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
Length = 331
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + + +V ++ + S+ I + ++++ +GGKR R ML L A + +
Sbjct: 14 ERLAEDLATGLAEVERMLRASVESEDAFITEAARHVMEAGGKRFRAMLVLLAAQFGDPKA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A IE H ATL HDDV+D + +RRG +A +G+ ++L GD+L +QA ++
Sbjct: 74 PAVVPGAVVIELTHLATLYHDDVMDQAPMRRGLPSANARFGDTVAILTGDYLFAQASEIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++ + L G++R+ YL V+ KT L + + +
Sbjct: 134 ADLGAEAIRVQARTFSR-LVRGQIRETIGPPEGMDPITHYLQVLADKTGSLIATSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G V L +G+A+QL DD++D + + GK G D R G TLPV+ A
Sbjct: 193 MLSGAPREVEDRLAGACEAIGVAWQLGDDIIDVVSDGSVSGKTPGTDLREGVRTLPVLYA 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ G ++ +++++A ++R + A+ + +AK +L L
Sbjct: 253 LASTDPADERLRMLL--SGPVAEQDIEEALTLLRAHPAMDMARKELVKWADQAKGALSGL 310
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD + +L+ + D+ ++R
Sbjct: 311 PDIPARTALIRLCDWVVERT 330
>gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
DSM 2375]
gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
DSM 2375]
Length = 335
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 101/335 (30%), Positives = 162/335 (48%), Gaps = 13/335 (3%)
Query: 1 MKMLEDLTLKDMEK----VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATAL 55
M+ + ++++ ++ I + + V + + YL +GGK LRP LTL T+
Sbjct: 1 MEEISMDVIEELGNYSVDISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSE 60
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ DN + A AIE IHT +L+HDD++DD +RRGK A VW ++L GD L S
Sbjct: 61 AVGGSRDNSLKSAAAIELIHTFSLIHDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFS 120
Query: 116 QAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+AF +++ + ++ + EG+ +S DV+EE+YL +I
Sbjct: 121 KAFEIIMNSDPEKNTPTQLSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFK 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +AA + +++ G V A+ YG +G+AFQ+ DD LD + +GK IG
Sbjct: 181 KTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGKPIGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T+ I A + + D S E++ A + + A+ + A
Sbjct: 241 DIAKGKMTIIAIKALAASEGEDNKKLLEILKDDNNSQEDIDIALDLFNKYGAIEYAKNVA 300
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK L LPDS K+ L ++ DF L+R +
Sbjct: 301 LENVASAKKVLEILPDSESKQMLFDLADFVLERHS 335
>gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579]
gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579]
Length = 323
Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 6 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 66 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 126 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 186 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K T + +++ ++ + A+ + Y KA + ++
Sbjct: 245 ---YAMEDPVLRQKITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 302 LPRGKAKYALQNVAKYIGKRK 322
>gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 318
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D+EKV + + S +++ + + +GGKRLRP + +A++ + R D
Sbjct: 5 NQRLNNDIEKVEENLRTNVTSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRL 64
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ LA AIE +HTATL+HDDV+D S RR + +G ++ GDFL ++A M+ +
Sbjct: 65 IKLASAIELLHTATLVHDDVLDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLADI 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ L + T+ EGE+ Q ++++ YL I KTAVLF A+ + +L A
Sbjct: 125 VPAKHLTIAAKAVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFGASCALGALCA 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+S+ +L G G+ FQ++DD DY+ +E GK + D G TLP I A +
Sbjct: 185 KCNHSITNSLSKLGFYYGVMFQMIDDYRDYKSGDSEWGKPVFNDLSKGILTLPGIYACKN 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K ++ + S E L+ + + + TE Y QKA + LP S
Sbjct: 245 -NKEIYQKVENYWRKEEKSNEELQDIISQIYSSGGMEYTENYIQRYRQKAFREIEKLPKS 303
Query: 305 SWKKSLMEVVDFC 317
+ ++++
Sbjct: 304 EARDIFADLINKL 316
>gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 323
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 169/322 (52%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFTPVEADLRILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLDQG 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ ++L GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA GE++Q + ++ E Y+ KTA L + + +
Sbjct: 126 YLANLDNLQVVKLLSEVIMDLATGEIQQGLNRFDASISIETYIEKSYYKTASLVANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L++ V + L +YG +LGIAFQ+VDD+LD+ + +GK +G D ++G T PV+
Sbjct: 186 AGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTSTTDTLGKPVGSDLKSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + + I +L++A ++++++ + + A + + A + L
Sbjct: 246 FAL-----AEKPYLEVLIEREFAQEGDLEQALELIQDSQGIQQSRELAAHHTKLAIEHLA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S ++L+++ ++ + RL
Sbjct: 301 TLPPSESHQALIKIAEYAISRL 322
>gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1]
Length = 330
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 3/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + T +++V L+ + + SD E + + +LI +GGKR RP+ TL A +
Sbjct: 10 ALAEATADGLKRVEDLLHREVHSDYEFVTETSLHLIEAGGKRFRPLFTLLAAQVGPHPER 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D + A +E IH ATL HDDV+D++A+RRG +A W N ++L GDFL + A +V
Sbjct: 70 DGVITAAAVVELIHLATLYHDDVMDEAAMRRGAESANSRWDNSIAILTGDFLFAHASRLV 129
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ K D E YL V+ KT L + +
Sbjct: 130 ADLGPDAVRIIAET-FAQLVTGQMRETRGPKPSDDPVEHYLRVVGEKTGSLIATSGRYGG 188
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G +AL +G +G AFQ+ DD++D ++ GK G D R G TLP++ A
Sbjct: 189 MFSGAPTEHIEALHRFGDVIGTAFQISDDIIDIASPADDSGKTPGTDLREGVHTLPMLYA 248
Query: 242 FQRGTKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G + + + + +A ++R ALV Y +A+ L
Sbjct: 249 LRDGDDSPSARRLRELLAAPITDDDEVAEALDLLRSGDALVRARETVAGYADRARAELAV 308
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP +L + D+ ++R
Sbjct: 309 LPACPAIDALRTLTDYTVERT 329
>gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ SDV I + ++L+ +GGKR RP+L + + +
Sbjct: 14 QSLETDVQLGLAAVEAGLLEATKSDVPFITEAAQHLVRAGGKRFRPLLVMLASQFGDPDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVPSANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G L YG LGIAFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADERTVDVLTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ K + DG + L + +R + AL Y Q A+ +L
Sbjct: 253 RAQAAADGKPDDLELVELLDGDLGDDAALDEVLRRLRAHPALEQARQDTVHYAQAARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 APLPEGYAKSALEELCDAVVHR 334
>gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
Length = 323
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKR+RP + L + L G+
Sbjct: 6 ELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAADGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LA+GE++Q + + E Y KTA L + +
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTSQSFETYFEKSYCKTASLIANSSRA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ +L +G LG+AFQ+VDD+LD+ G ++GK D G T P
Sbjct: 186 AGVLSECNPQELDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLATGYLTAPTF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + + + I+ +L++A ++R ++A+ T A + +++++S+
Sbjct: 246 YALEENPEL-----GALIDREFSEAGDLEQALELVRSSQAIPRTRELAEKFARESRESIA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ DS K++L+E+ DF L RL
Sbjct: 301 WMADSPSKRALLELPDFVLSRL 322
>gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
Length = 336
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 9/316 (2%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
V+ I ++ + + + D +LI +GGKRLRP + +A A L + + A A+E +
Sbjct: 20 VDGYIYAKVKGEPKEVYDAGLHLIRAGGKRLRPAIVVAIAEALGEPAERALPFAAAVELV 79
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H TL+HDD++D RRG VWG ++ GD L ++AF + + +
Sbjct: 80 HNFTLIHDDIMDRDEFRRGVPTVHKVWGEPLAITAGDLLFAKAFETLTDALDKGIPPDRV 139
Query: 135 --------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +AEG+ L + +V+ ++YL +I KT LF A+ + L+A
Sbjct: 140 ARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEYLIMIYKKTGALFEASAVLGGLVATG 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
++ + L +G NLGIAFQ+ DD+L G+ E+GK + D R GK TLP+I A +
Sbjct: 200 DDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEELGKPVYSDIREGKKTLPIIYALRNLE 259
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSS 305
++ + + + S E L++A ++ + A+ E +A Y +A ++LR +P+++
Sbjct: 260 DEDREKLVMVLGNREASREELEQAAKLVVASGAIDYAESKAREYIDRALEALRGAVPENN 319
Query: 306 WKKSLMEVVDFCLQRL 321
+++ L E+ F R
Sbjct: 320 YRRILEELAKFVATRT 335
>gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
Length = 343
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 18/324 (5%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V+ +IL+ + + D ++ +GGKR+RP + L + + + A A+EF
Sbjct: 18 VDKIILELVPEKEPKTLYDAARHYPLAGGKRVRPFVVLRATEAVGGDPEKALYPAAAVEF 77
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IH +L+HDD++D LRRG+ VWG ++L GD L S+AF V + K +A
Sbjct: 78 IHNYSLVHDDIMDMDELRRGRPTVHKVWGINMAILAGDLLFSKAFEAVAKAKVDPDKKAR 137
Query: 134 S-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L EG+ + +VT ++YL +I KT LF + + +++
Sbjct: 138 ILEVLVKTSNELCEGQALDIEFETRDEVTVDEYLKMISGKTGALFDGSATIGAIVGTDNE 197
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
QAL +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V FQ ++
Sbjct: 198 EYIQALSKWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVSHFFQNASED 257
Query: 249 EKNFWKSTIND------------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+K + + E +++A ++++ ++ A ++A +
Sbjct: 258 DKAEFLKVFGKYAGDAKGDALIHDERVKEEVERAIELLKKYGSIDYAAQYAKDLVKEANE 317
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L+ LP+S ++ L + +F ++R
Sbjct: 318 ALKVLPESEARRDLELLAEFLVER 341
>gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 323
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 6 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 66 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 126 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 186 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + T + +++ ++ + A+ + Y KA + ++
Sbjct: 245 ---YAMEDPVLRQQITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 302 LPRGQAKYALQNVAKYIGKRK 322
>gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 356
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 3/313 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E V + + S ++ + ++L+ +GGKR RP+L A + V A +
Sbjct: 45 LESVEAELRASVASADPLVTEAARHLVEAGGKRFRPLLVALGAQFGDPTDPQVVSAAVVM 104
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D++A+RRG +A W N ++LVGD+L ++A + + +
Sbjct: 105 ELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADISADLGPEAVRL 164
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L G++ + +N YLHVI KT L + + L AG +
Sbjct: 165 QART-FARLVHGQIAETVGPRNGQDPVSHYLHVIAEKTGSLIATSARFGGLFAGASATHT 223
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--VILAFQRGTKRE 249
+AL YG +G+AFQL DD+LD E + GK G D R G PTLP LA
Sbjct: 224 EALAGYGETIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLYALASDDADAAS 283
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + +A ++RE+ AL SY + A++ L LPD+ +++
Sbjct: 284 VRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARERLATLPDNPSRRA 343
Query: 310 LMEVVDFCLQRLN 322
L + D+ R +
Sbjct: 344 LESLCDYIADRTS 356
>gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
Length = 323
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKRLRP + L + L +G+
Sbjct: 6 ELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALSEQGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LA+GE++Q + T E YL KTA L + +
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTAQTFETYLEKSYCKTASLIANSCRA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G + +L +G LG+AFQ+VDD+LD+ G ++GK D +G T P
Sbjct: 186 AGVLSGCAPTQLDSLYQFGRQLGLAFQVVDDILDFTGNDQQLGKPAASDLASGYLTAPTF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A +E + I+ +L KA ++R ++A+ T A ++ +++++S+
Sbjct: 246 YAL-----KEHPSLQPLIDRQFSEPGDLDKALEMVRASKAIERTRKLAETFARESRESIA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP+S+ +++LME+ F L RL
Sbjct: 301 WLPESAAQRALMELPKFVLSRL 322
>gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC
BAA-286]
Length = 323
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ ++++K N + + I +++ Y++ S GKR+RP+L L A +
Sbjct: 7 IAKPVTEELKKFNTYYKDSVFCNNVRIQEIIDYIMKSDGKRIRPILLLLAAKACGEINNT 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A +E +HTA+L+HDDVVD+S +RRG + ++ N+ +VL GD+ LS A +
Sbjct: 67 TYNSAITVELLHTASLIHDDVVDESKIRRGMASLNAIYDNKMAVLAGDYFLSTALIKSVL 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + E + +S + LAEGEL QLSL K L + E++Y VI+ KTA L S + + ++
Sbjct: 127 TGNIEIISRVSDLGRDLAEGELNQLSLVKELILDEDEYFQVIRKKTASLMSVCMRIGAMS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + G LG+ FQL DD+ DY + +GK G D R GK TLP++ A
Sbjct: 187 VDASSEEVERFTKLGEYLGVCFQLRDDIFDYFTDA--IGKPTGNDIREGKVTLPLLYAIS 244
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ EK S I + EN+ K +E+ + + Y +A++ + + D
Sbjct: 245 YAPEDEKKELLSVIFSYNYTDENIHKLISYAKEHGGIEYAYRKMEEYKNRAEEIIATVSD 304
Query: 304 SSWKKSLMEVVDFCLQR 320
+ +++L V++ ++R
Sbjct: 305 TEVREALEAAVEYIVER 321
>gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
Length = 333
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 148/322 (45%), Positives = 208/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DM V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A + Y
Sbjct: 12 DRMAAYLESDMAAVSTLIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 72 GPFHINLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV
Sbjct: 132 MVETGSLRVLDILANASATIAEGEVLQLTASQNLATTEEVYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + AL YG LGIAFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I
Sbjct: 192 GVIAGAPDDHVAALFEYGDALGIAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW TI GK +L+ A ++ ++ AL DT A + +AK +L
Sbjct: 252 AVAKADAEERAFWVRTIEKGKQEEGDLQHAIALLHKHAALTDTSVVARTQAARAKAALAP 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP K L+++ D+ ++R+N
Sbjct: 312 LPAHPVKDMLVDLADYVVERIN 333
>gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
Length = 282
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 118/282 (41%), Positives = 168/282 (59%), Gaps = 1/282 (0%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GGKRLRP+L + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A
Sbjct: 1 GGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANA 60
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
+GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE
Sbjct: 61 AFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEA 120
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
Y+ VI SKTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + +
Sbjct: 121 SYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGD 180
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
EMGKN+G+D GKPTLP++ A Q G + + I + L + M + +
Sbjct: 181 EMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGS 239
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L T +A KA L LP+S +K++L+ + + R
Sbjct: 240 LQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAVNRS 281
>gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
E33L]
gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
E33L]
Length = 323
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 6 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 66 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 126 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 186 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + ++ + Y KA + ++
Sbjct: 245 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSASIDKAFAFSERYLHKALEMIKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 302 LPRGQAKYALQNVAKYIGKRK 322
>gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1273]
gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1272]
gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1272]
gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1273]
Length = 320
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + +A +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNIEIPDAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPVLREKIISVNENTAASEMKEIIDDIKASEAIDKAFSFSERYLHKALEIIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
Length = 324
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 180/321 (56%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L +D+ +NF I KR+ S++ +I +KY+I SGGK++R + L A L Y
Sbjct: 3 INQINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTYN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H +LA IEFIHTATLLHDDV+D S RRGK A +++GN S+L+GDF+ ++AF M
Sbjct: 63 KTQHTILATLIEFIHTATLLHDDVIDHSTTRRGKTTANIIFGNPASILIGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E +S L ++ +AEGE+ QL+ + +T +Y+ +I KTA LF A + S
Sbjct: 123 MTELQSLRILSLMADAVNIIAEGEILQLTYCNDPTITMNNYMQIIYKKTARLFEVASQSS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE-MGKNIGEDFRNGKPTLPVI 239
+++A QAL +YG +GIAFQL+DD+LDY GKNIG D GK TLP++
Sbjct: 183 AILAHANIQQEQALSNYGKYIGIAFQLIDDLLDYNASDIVSFGKNIGNDLNEGKLTLPLL 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A T +E + I D + L IM++ +L T A + KA + L
Sbjct: 243 HAIYHSTPKEASIIHQAITDKN-NQNLLYTVLNIMQQYGSLDYTRKCAETKINKAINCLN 301
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L S +K +L + F L R
Sbjct: 302 ILSPSPYKHALKHLAYFILTR 322
>gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
Length = 335
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 102/335 (30%), Positives = 163/335 (48%), Gaps = 13/335 (3%)
Query: 1 MKMLEDLTLKDMEK----VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATAL 55
M+ + ++++ ++ I + + V + + YL +GGK LRP LTL T+
Sbjct: 1 MEEISMDVIEELGNYSVDISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSE 60
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ DN + A AIE IHT +L+HDD++DD +RRGK A VW ++L GD L S
Sbjct: 61 AVGGSRDNSLKSAAAIELIHTFSLIHDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFS 120
Query: 116 QAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+AF +++ + ++ A + EG+ +S DV+EE+YL +I
Sbjct: 121 KAFEIIMNSDPEKNTPAQLSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFK 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +AA + +++ G V A+ YG +G+AFQ+ DD LD + +GK IG
Sbjct: 181 KTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGKPIGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T+ I A + + D S E++ A + + A+ + A
Sbjct: 241 DIAKGKMTIIAIKALAASEGEDNKKLLEILKDDNNSQEDIDVALDLFNKYGAIEYAKNVA 300
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK L LPDS K+ L ++ DF L+R +
Sbjct: 301 LENVASAKKVLEILPDSESKQMLFDLADFVLERHS 335
>gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM
22836]
Length = 323
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 166/318 (52%), Gaps = 2/318 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ ++++ N + + I +++ +++ S GKR+RP+L L A +
Sbjct: 7 IAKPVAEELKIFNTYYKDSVFCNNVRIQEIIDHIMKSDGKRIRPILLLLAAKACGEINNI 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A +E +HTA+L+HDDVVD+S +RRGK + ++ N+ +VL GD+ LS A +
Sbjct: 67 TYNAAITVELLHTASLIHDDVVDESKIRRGKASLNAIYDNKMAVLAGDYFLSTALIKSVL 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + E + +S + LAEGEL QLSL K L + E++Y VIK KTA L S + + ++
Sbjct: 127 TGNIEIISNISDLGRDLAEGELNQLSLVKELIIDEDEYFQVIKKKTASLMSVCMRIGAIS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ G G+ FQL DD+ DY + +GK G D R GK TLP++ A +
Sbjct: 187 VNASEEEIEKFTRLGELFGLCFQLRDDIFDYFTDA--IGKPTGNDIREGKITLPLLYAIK 244
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ EK S + + EN++ +E+ + + + ++A+ + +PD
Sbjct: 245 NASEEEKKEILSIVYSYNYTDENIQHLIHYAKEHGGIDYAYRKIEEFKEQAEKIIETIPD 304
Query: 304 SSWKKSLMEVVDFCLQRL 321
S +++L VD+ ++R+
Sbjct: 305 SDVREALEATVDYIIKRV 322
>gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 322
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 170/316 (53%), Gaps = 3/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D +DM+ V+ I + + + ++ DV+ L SGGKRLRP++ + ++ Y+ D
Sbjct: 8 TDDIKQDMDSVDNYIKRALKTHQRLLSDVINQLAGSGGKRLRPLMVILSSRFGGYKRDEI 67
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ LA AIE +H ATL+HDD++DD+ +RRG+ + WG +V GDFL S F ++ +
Sbjct: 68 IHLAAAIEILHMATLVHDDIIDDAPIRRGEPTVQSRWGKDVAVFTGDFLFSTVFSLLSKE 127
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
S + L +S V + EGE+ Q N V+ YL I+ KTA LF+ + + + A
Sbjct: 128 VSFDDLYEVSRVVKQICEGEVDQYQHRYNTAVSVRSYLRRIRHKTADLFALSCVIGAKRA 187
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + AL+++GM+ G+ FQ++DD+LD+ G+ E+GK G DF G TLP
Sbjct: 188 GCSKPIYNALENFGMDFGMVFQIIDDILDFEGQQEELGKPAGADFEEGVYTLP---LIYA 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + +N + +++ +++ + A ++ KA + ++ LPD+
Sbjct: 245 LDTKYRLPLLDVLNKDRYDASDVEAVKAMVKAAGGIEKARSIANNFAAKAVEDIKLLPDN 304
Query: 305 SWKKSLMEVVDFCLQR 320
K+ ++ +++ ++R
Sbjct: 305 EHKRIMLAILNESVER 320
>gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
Length = 338
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 5/324 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + V ++ + S+ + + ++L+ +GGKR RPM+ L A +
Sbjct: 16 DLEKAVRVGLAAVEEMLRLSVHSEFSFVTEASRHLVDAGGKRFRPMVVLLAAQFADPEAA 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A AIE H +TL HDDV+D++ LRRG +A W N ++L GDFL ++A +
Sbjct: 76 GVVPAAVAIELTHLSTLYHDDVMDEAPLRRGAASANARWTNTVAILTGDFLFARASEITA 135
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + TL EG++R+ E YL VI KTA L + + + ++
Sbjct: 136 DLGPEATRILART-IATLCEGQIRETVGPGPGQNQIEHYLRVITDKTASLIATSGRLGAM 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG L ++G G+AFQL DD++D GK G D R G PTLPV+ A
Sbjct: 195 LAGADRVTADVLAAFGERFGVAFQLSDDIIDLASPTETSGKTPGTDLREGIPTLPVLYAL 254
Query: 243 QRGTKREKNFWKSTINDGK----ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + D ++ + +A ++RE+ A+ + +A+ L
Sbjct: 255 EGEDAGARRLRDLLGADPWASSGVTESAVVEALEVLREHPAMDRARAELARWSGEARACL 314
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LPD K +L + DF + R +
Sbjct: 315 APLPDGPAKTALESLADFVVDRTS 338
>gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa]
gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa]
Length = 420
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 97/328 (29%), Positives = 174/328 (53%), Gaps = 11/328 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ D++ +N + + ++ ++ + + +GGKR+RP L +
Sbjct: 98 ITNLFEVVADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEV 157
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+
Sbjct: 158 VGMKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMF 217
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DV E+YL KTA L +
Sbjct: 218 AQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIA 277
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ +GV +SV + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 278 ASTKGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 337
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A ++ K + G + +A +++ + + + A A
Sbjct: 338 TAPVIFALEQSPKLREIIESEFCESGS-----IDEAIELVKSSGGIERAQELAKEKADLA 392
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+LRCLP S++ +L E+V + L+R++
Sbjct: 393 IQNLRCLPQGSYQSALEEMVLYNLERIH 420
>gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus
thuringiensis str. Al Hakam]
gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus
thuringiensis str. Al Hakam]
Length = 323
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L +Y+
Sbjct: 6 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYK 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 66 LDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLEC 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 126 ITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 186 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K + + +K+ ++ + A+ + Y KA + ++
Sbjct: 245 ---YAMEDPILCKKIRSVHENTTADEMKEIIEAVKNSAAIDKAFVFSERYLHKALEMIKP 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 302 LPRGQAKYALQNVAKYIGKRK 322
>gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
sphaericus C3-41]
gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus
sphaericus C3-41]
Length = 324
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K+L D++ + + + S +I D +L+ +GGKR+RP+ L A EY
Sbjct: 6 LKLLYSDLKSDIDIIERELENAVDSSSYLINDASLHLLQAGGKRIRPIFVLLGAKFGEYD 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DDS +RRG+ + W N+ ++ GDF+ ++A
Sbjct: 66 IEKMKDVAVPLELIHMASLVHDDVIDDSNMRRGRPTVKAQWNNRVAMYTGDFIFARALEY 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + L+ + GE+ Q+ LD +DY IK KTA+L S++ E+
Sbjct: 126 ITKLEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRRIKRKTALLISSSCELG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AGV + LK +G +G++FQ++DDVLD E+GK G D G TLP++L
Sbjct: 186 AVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGKPAGSDLLQGNITLPILL 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + + G ++ + +R++ A+ + Y +KA +
Sbjct: 246 LK---DDPEMQPYLVKVFAGTLTEVERQNMLHYVRKSHAIEQANRMSDKYLKKALQEIDA 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP KK L +V F +R
Sbjct: 303 LPKHPVKKKLRDVALFMGKRK 323
>gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
Length = 334
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 146/321 (45%), Positives = 205/321 (63%), Gaps = 1/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L +DM+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLATA + Y
Sbjct: 13 ERLATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYT 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L +++F +
Sbjct: 73 GPYHVHLAATVEFIHTATLLHDDVVDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ A T+AEGE+ QLS +++L E+ YL V++ KTA LFSAA EV
Sbjct: 133 MVETGSLRVLDILANAAATIAEGEVLQLSAAQDLATDEDIYLKVVRGKTAALFSAATEVG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + +AL +YG LGIAFQ+VDD+LDY G+ + GKNIG+DFR K TLPVI
Sbjct: 193 GVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNIGDDFRERKLTLPVIK 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW I G +L+ A ++ + A+ T A +Y +AK +L
Sbjct: 253 AVAKADLEERAFWSRVIEKGDQRDGDLEHALALLDRHGAMAATRADAVAYAAQAKAALEA 312
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ L ++ D+ + R+
Sbjct: 313 VAPHPLTDMLRDLADYVVARV 333
>gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
Length = 336
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S+V I + ++L+ +GGKR RP+L + + +
Sbjct: 14 QALEADVQAGLAAVEAGLLDATKSEVPFITEAAQHLVSAGGKRFRPLLVMLASQFGDPDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPAAVVVELTHLATLYHDDVMDEADVRRGVESANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + Y+ V+ KT L + A +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYMDVLGGKTGSLVAVAGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG SV L YG LGIAFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMAGADESVVDILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGISTLPVLHL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
R + + DG ++ + L +A +R + AL Y Q+A+ L
Sbjct: 253 RARAAAEGRPEDLKLVELLDGDLNDDARLAEALHGLRAHPALEQARRDTVRYAQEARAVL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 TPLPECYAKSALEELCDAVVHR 334
>gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 317
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 178/307 (57%), Gaps = 1/307 (0%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEF 73
++ + + S+V I V KY+I SGGKR+RP L L + ++ + +LA A+E+
Sbjct: 9 FEKVMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEY 68
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+HTA+LLHDDVVD S LRRGK A ++GN T+VL GD+L + A + + + ++ +
Sbjct: 69 LHTASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYLYANALYLFSIHGNIDMIKNV 128
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
S +AEG+L +L + D+T ++Y +++ KTA LF + V + + +++Q
Sbjct: 129 SQTVKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQK 188
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +EK F
Sbjct: 189 AFEYGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKEKEFI 248
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
KS + + E+L K I+ + +T+ +A + KA +SLR +S + L +
Sbjct: 249 KSVLLNKNPDTEDLLKVKNIVESYGGIEETKQKAKDFVDKAIESLRVFGNSEDVEELESL 308
Query: 314 VDFCLQR 320
F ++R
Sbjct: 309 AKFIIER 315
>gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
Length = 350
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 152/320 (47%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + +V L+ + + SDV+ + D +L+ +GGKR RP+ TL A +
Sbjct: 33 ETLLRSIAGGLTEVEKLLREVVRSDVQAVNDAALHLVEAGGKRFRPLFTLLAAQFGPKQD 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ ++ A A+E +H ATL HDDV+D++ +RRG + W N ++L GDFL + A +V
Sbjct: 93 DHVIVAAAAVELVHLATLYHDDVMDEATMRRGAESVNARWDNTIAILTGDFLFAHASRLV 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A ++ L G++R+ D YL VI KT L + +
Sbjct: 153 A-DLGTDAARIIAETFGELVTGQMRETVGPGPGDDAVAHYLTVIAQKTGSLIATSGRFGG 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +AL+ +G +G AFQ+ DD++D +E+GK G D R G TLP++ A
Sbjct: 212 MMSGAAEEHIEALRRFGDIIGTAFQISDDIIDIASPSDELGKAQGTDLREGVRTLPMLYA 271
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ +++A ++R + L Y Q+A+ L L
Sbjct: 272 --LADPETDPRLIELLSGPIADDALVQEALELLRVSSGLDRARVTLSDYAQRARAELTAL 329
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P S + + V D+ + R
Sbjct: 330 PASPARDACESVADYLVART 349
>gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS]
gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS]
Length = 324
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 170/315 (53%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++++ + S ++ V +Y++ GK++RP L + A + D
Sbjct: 10 VTEELKQFQERYKTVLHSSNSLVDKVTRYVLRQQGKQIRPTLVILAAKVCGGVHDVTYRG 69
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+ +E K
Sbjct: 70 AIMVELLHSATLIHDDVVDGAEMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLENKDY 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+L +S ++EGE+ Q+ +++LD+TEEDYL VI KT L + + + + +
Sbjct: 130 RSLHLVSEAVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASSTDS 189
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+LKSYG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I A ++ K
Sbjct: 190 EDEIASLKSYGEFLGLAFQIRDDLLDYTGDSKKTGKQLGIDIKDRKITLPLIYALRQSDK 249
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
E+N KS + + + + L A + KA +S+ P+S K
Sbjct: 250 SEQNKIKSILKSSRKRSVRSGEVIDFVTRKGGLDYAAEVAEGFADKALESIAHFPESDAK 309
Query: 308 KSLMEVVDFCLQRLN 322
+SL +VDF ++R +
Sbjct: 310 RSLQLLVDFVMKRQH 324
>gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu]
Length = 331
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 180/319 (56%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPIASDMEQVNRVIRQSLASDVVLINQIAEYIIGAGGKRLRPALLLFVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADATTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G + F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQAALAREAIEQGGTD--RFETIFDAITRSGALDHTLECARQEAQAAAAAIAAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 313 SVYKESLLELCSYSTSRQS 331
>gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 323
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFTPVEADLRLLADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQD 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ ++L GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESDVRRGVPTVHSLFGNRIAILAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V LA GE++Q + ++ E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIMDLATGEIQQGLNRFDAGISIETYLQKSYYKTASLIANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L++ V + L SYG + GIAFQ+VDD+LD+ + +GK +G D ++G T PV+
Sbjct: 186 AGLLSEVSRETVEHLYSYGRHFGIAFQIVDDILDFTSTTDTLGKPVGSDLKSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + I+ +L++A ++++++ + A + + A + L
Sbjct: 246 FAL-----AEKPSLEVLIDREFAQEGDLEQALALIQDSQGIHKARELAAHHAKLAIEHLA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S ++L+ + ++ L RL
Sbjct: 301 VLPPSESHQALINIAEYTLSRL 322
>gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
12804]
gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
Length = 308
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 128/309 (41%), Positives = 190/309 (61%), Gaps = 3/309 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ V+ +I R+ S+V +I + Y+I +GGKR+RP + L A L Y+G++H LLA +
Sbjct: 1 MKAVDAVIRGRLDSEVVLIRTIADYIIGAGGKRMRPAMVLMMARALGYQGEHHRLLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++E S ++
Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFEMMVEAGSMRIMQ 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE+ QL + DV++ YL V++ KTA LF AA +V +++AG
Sbjct: 121 ILSEATTIIAEGEVLQLLNVHDPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + G +++
Sbjct: 181 EAAAAYGRHIGTAFQLVDDVLDYSGDAQALGKNVGDDLREGKPTLPLIRVMETGAPQQRE 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ I G + ++ AL A + A+ +L LP S ++KSL+
Sbjct: 241 LIRNAIKTG---DADFAAVAQAIQATDALEHARQAALAEADAARQALAGLPISVYQKSLL 297
Query: 312 EVVDFCLQR 320
E F + R
Sbjct: 298 EFCAFAVNR 306
>gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 323
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 6 SLFAPVDDDLRLLTDNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDEAELRRSVPTVNSLFDNRVAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE++Q + ++ E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEIQQGINRFDTSISLEAYLEKSYYKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ V L +YG NLG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AGVLSEQSAEVNHHLYNYGRNLGLAFQIVDDILDFTSPTEVLGKPSGSDLISGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A +E + + I +++KA + ++ ++ ++ A YGQ A L
Sbjct: 246 FAM-----KENPYIEVLIEREFSQEGDIEKALDFIHSSQGILRSKELANQYGQSALKHLD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S K+ L+E+VD+ L R+
Sbjct: 301 CLASSPSKEVLIELVDYVLSRI 322
>gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa]
gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase
gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa]
gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa]
Length = 323
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 8/324 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---L 57
+ + +++ + + K + S ++ ++L + GKR RP + L +
Sbjct: 4 ITNILAPVENELDLLTKNLKKLVGSGHPILSAASEHLFSASGKRPRPAIVLLISKATMEN 63
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
E H LA E IHTA+L+HDD++D+S +RRG +G + ++L GDFL +Q+
Sbjct: 64 EIITSRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAILAGDFLFAQS 123
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ +S E ++ +S V AEGE+R+ +D+T E+YL KTA L +A+
Sbjct: 124 SWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLAASS 183
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++L++ V +V L +YG +LG+AFQ+VDD+LD+ E+GK D + G T P
Sbjct: 184 KAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A ++ ++ I ++ + I+ E +A+ T A + Q A
Sbjct: 244 VLFALEQNSELIP-----LIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQC 298
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP SS K++L + + L+RL
Sbjct: 299 LENLPPSSSKEALKLITKYVLERL 322
>gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus sp. NA2]
gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus sp. NA2]
Length = 341
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + + V+ + + I ++ + ++ +GGKR+RP + L + +
Sbjct: 4 DELFERIREKAKFVDEKLFEIIPEKEPKVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGD 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A AIE IH +L+HDD++D RRGK VWG ++L GD L S+AF
Sbjct: 64 WRKALYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRVWGINMAILAGDLLFSKAFEA 123
Query: 121 VIETKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + +A L L EG+ L VT E+Y++++ KT LF A
Sbjct: 124 ISRAEVPPEKKAKILETIVLASNELCEGQAMDLEFENREAVTIEEYMNMVSGKTGALFEA 183
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ ++ ++ AL +G N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 184 SAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKT 243
Query: 236 LPVILAFQRGTKREKNFWKSTIND-----------GKISVENLKKAFIIMRENRALVDTE 284
L V F+ ++ K + + + +A +++E ++
Sbjct: 244 LIVAHFFENADEKAKERFLKVFGKYAGDVRGSGIIEEDVKAEVMEAIELLKEYGSIDYAA 303
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A KA ++L LP+S ++ L + +F ++R
Sbjct: 304 KVAKELVDKANEALSILPESKARRDLELLANFIVER 339
>gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
Length = 336
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 150/322 (46%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE T + V +L+ S+V I + ++L+ +GGKR RP+L L A +
Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVLLAAQFGDPHA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A + WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVSSANVRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ E YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVEHYLDVLAGKTGSLIAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G S+ L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGADESIVSILTQYGERLGMAFQLADDVLDIASDSHESGKTPGTDLREGVATLPVLYV 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +R + AL Y +A+ L
Sbjct: 253 RERAEATGSAEDRELCELLAGDLTDDARHAEVLRRLRAHPALEQARRVTVRYAAEARSML 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L + D + R
Sbjct: 313 APLPEGPAKAALEGLCDAVVHR 334
>gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 323
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ + + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 6 SLFTPVEADLRLLAENLKQLVGNRHPILFMAAEHLFGAGGKRIRPAIVLLISRATMLEED 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ +VL GDFL +Q+
Sbjct: 66 ITLRHRRLAEITEMIHTASLVHDDVVDESQMRRGVPTVHSLFGNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V LA GE++Q + ++ E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIMDLATGEIQQGINCFDNGISIETYLKKSYYKTASLIANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++L++ + L YG +LG+AFQ+VDD+LD+ + +GK G D ++G T PV+
Sbjct: 186 AALLSDASPETAENLYDYGRHLGLAFQIVDDILDFTSTTDTLGKPAGSDLKSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I +L++A ++++++ + A + + A D L+
Sbjct: 246 FALGEKPDLEA-----LIERKFEQEGDLEQALELIQDSQGIQQARELAAYHAKLAVDHLQ 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ S +++L+ + D+ L RL
Sbjct: 301 VIAPSESREALINIADYVLSRL 322
>gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G H LA +
Sbjct: 1 MRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGHRHHELAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++E S +E
Sbjct: 61 EFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVEAGSMRIME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ +++AG +
Sbjct: 121 ILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEME 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT +++
Sbjct: 181 EAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTAQQRE 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G E+ F + + AL T A + A+ + PDS K++L+
Sbjct: 241 LARDAIVQGGT--EHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFPDSPLKQTLI 298
Query: 312 EVVDFCLQRLN 322
++ F LQR +
Sbjct: 299 DLCAFSLQRQS 309
>gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 336
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQAGLAAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAARFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGLVPSAVVVELTHLATLYHDDVMDEADVRRGVPSANARWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + + E YL V+ KT L + A +
Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQILETAGPMDGRDPVEHYLEVLSGKTGALVAVACRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A +R + AL Y + A+ +L
Sbjct: 253 RERVARLGLAEDIALCELLDSDLTDDARHAEALTRLRAHPALEQARKDTVRYVEDARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + + K +L+E+ D + R
Sbjct: 313 APLAECNAKAALIELCDAVVHR 334
>gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec]
gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
Length = 338
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ V ++ + S+ + + ++L+ +GGKR RPM+ L A + V A AI
Sbjct: 25 LAAVEEMLRGSVRSEFSFVTEASRHLVDAGGKRFRPMVVLLAAQFADPDAAGVVPAAVAI 84
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H +TL HDDV+D++ LRRG +A W N ++L GDFL ++A + + +
Sbjct: 85 ELTHLSTLYHDDVMDEAPLRRGAASANARWTNTVAILTGDFLFARASEITADLGPEATRI 144
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
TL EG++R+ E YL VI KTA L + + + +++AG
Sbjct: 145 LART-IATLCEGQIRETVGVGPGQDPIEHYLRVITEKTASLIATSARLGAMLAGADPVTT 203
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L ++G G+AFQL DD++D + GK G D R G PTLPV+ A Q +
Sbjct: 204 DVLAAFGERFGVAFQLSDDLIDVASPSEDSGKTPGTDLREGIPTLPVLYALQGEDAAARR 263
Query: 252 FWKSTINDGK----ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + ++ + +A ++RE+ A+ + +A++ L LPD S K
Sbjct: 264 LRDLLGVNPRTEAGVTESGVVEALELLREHPAMDRARAELIRWSSEARECLAPLPDGSAK 323
Query: 308 KSLMEVVDFCLQRLN 322
+L + DF + R +
Sbjct: 324 TALESLADFVIDRTS 338
>gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
Length = 325
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60
+++ +ME + S V ++ + Y++ GK++RPM TA M+
Sbjct: 6 QIKEPIAYEMELFEEKFSLSMRSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNNGEV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A IE IHTA+L+HDDVVDDS +RRG + +W N+ +VLVGDFL S+ +
Sbjct: 66 NDRTYRGASVIELIHTASLVHDDVVDDSNIRRGFFSLNALWKNKIAVLVGDFLFSKGLLL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A +
Sbjct: 126 SIDNGDTDLLQIISVAVREISEGELLQIEKARKLDITEDLYYEIIRQKTATLIAACCAMG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ ++ + + +G +G+AFQ+ DD+ DY ++GK G D + K TLP+I
Sbjct: 186 ACAVHAKDKEVKRMHKFGELIGMAFQIKDDLFDY--GTAKIGKPTGIDIKEQKMTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+K++KN+ ++I + + + + +R+N L + + Q+A + L
Sbjct: 244 VLNTVSKKDKNWLINSIKNKNTDKKRVNEVIAFVRDNGGLEYAVTKMKALQQEALEILMT 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S ++ SL +V++ + R
Sbjct: 304 YPKSVYRDSLELMVNYVIDRK 324
>gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S]
gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S]
gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
Length = 342
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
+ L D + +V L++ + + + + +L +GGKR RP+ T+ TA + E
Sbjct: 23 QQLADAVRDGLARVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPEGS 82
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A +E +H ATL HDDV+D++A+RRG +A WGN ++L GD+L + A +
Sbjct: 83 DPAVVTAATVVELVHLATLYHDDVMDEAAMRRGAPSANARWGNSIAILAGDYLFAHASRL 142
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + L G++R+ ++ E YL V+ KT L +A+
Sbjct: 143 VSTLGPEAVRIIAET-FAELVTGQMRETIGAREKQDPVEHYLKVVWEKTGSLIAASGRFG 201
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G L+ G +G AFQ+ DD++D + GK G D R G TLPV+
Sbjct: 202 GTFSGADADQIARLERLGDAVGTAFQIADDIIDISSASEQSGKTPGTDLREGVHTLPVLY 261
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + + ++ ++ +A ++ + + + + Y +A+ L
Sbjct: 262 ALRE-EGADADRLRVLLDGPVTEDADVAEALALLERSPGMAAAKAKLGEYADRARAELAQ 320
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP +L+ +VD+ ++R+
Sbjct: 321 LPQGPANDALVRLVDYTVERV 341
>gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
Length = 323
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D+++++ + + I + ++ ++L +GGKR+RP + L +
Sbjct: 6 TLFSPVEADLKELSENLTRLISARHPILGAAAEHLFSAGGKRVRPAIVLLASRATLGDRP 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ALRR ++ N+ +VL GDFL +Q+
Sbjct: 66 LTQRHRRLAEITEMIHTASLVHDDVVDEAALRRSVPTVNSLFDNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V AEGE++Q + + E Y+ KTA L + +
Sbjct: 126 YLANLDNLTVVKLLSEVIKDFAEGEIQQGLNRFDTGMNLEIYIEKSYYKTASLIGNSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ V + L YG NLG+AFQ+VDD+LD+ G + +GK G D G T P +
Sbjct: 186 AAVLSEVDPEIGDRLYDYGRNLGLAFQIVDDILDFTGSTDVLGKPAGSDLIGGHITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I + +KA I+R + + + A +GQ A+ SL
Sbjct: 246 FAM-----EEHPNLTQLIEREFAENGDPEKALEIVRNSNGISRAKELAAHHGQLARHSLE 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S K +L +++D+ L R+
Sbjct: 301 CLDPSPSKDALTDLIDYVLGRM 322
>gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces
viridochromogenes DSM 40736]
gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces
viridochromogenes DSM 40736]
Length = 336
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V + + S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLAAVEEGLFEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEATVRRGVASANTRWGNSVAVLTGDFLFARA-SHT 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ E YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQILETAGPQDGRDPVEHYLDVLAGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G + L YG LG+AFQL DDVLD + +E GK G D R G PT+PV+
Sbjct: 193 MMSGADETTVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTMPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ + + +A ++R + AL Y Q A+ +L
Sbjct: 253 REQAARLGLADDVALCELLDSDLTDDARHAEALRLLRAHPALEQARRDTVRYAQDARSAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ + K +L+E+ D + R
Sbjct: 313 APLPECAAKAALVELSDAVVHR 334
>gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
5501]
gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
5501]
Length = 335
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 2/312 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
KD+++V + + + ++ + L+ +GGKRLRP+L L + + ++ + + +
Sbjct: 10 INKDLKQVEQKLKEVTETKFSLLYRISNRLLNAGGKRLRPLLVLLSGKLNDHSAQDLISI 69
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
++E +H ATL+HDDV+D+S RR + WGN+ +VL GD L +QA +++E +
Sbjct: 70 GASVELLHMATLIHDDVIDNSLHRRSENTINQDWGNKVAVLSGDLLYTQALKLLVEHGND 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + + + + EGE +Q + +L+ +DY++ I KTA+L A+ ++ ++++ V
Sbjct: 130 EIVNYMLDIVGLICEGEAKQAVTNHDLNQDMKDYINKITKKTALLIGASCKLGAMVSQVD 189
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
A++SYG NLGIAFQ+++D+ D + E+GK G+D R G TLPV+ A K
Sbjct: 190 AKKAAAMESYGKNLGIAFQIINDLNDIVADKEELGKEPGDDLRQGTLTLPVLYALDNSIK 249
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+E S +KKA I++ + A+ + + Y +A D+L DS K
Sbjct: 250 KEFLKKVII--SRNNSQAEIKKAIGILKNSGAIKHSIEISRDYINQALDTLTLFSDSPAK 307
Query: 308 KSLMEVVDFCLQ 319
+L + +
Sbjct: 308 NALQLITQTVIN 319
>gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 317
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 177/307 (57%), Gaps = 1/307 (0%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEF 73
++ + + S+V I V KY+I SGGKR+RP L L + ++ + +LA A+E+
Sbjct: 9 FEKVMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEY 68
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+HTA+LLHDDVVD S LRRGK A ++GN T+VL GD++ + A + + ++ +
Sbjct: 69 LHTASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYMYANALYLFSTHGDIDMIKNV 128
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
S +AEG+L +L + D+T ++Y +++ KTA LF + V + + +++Q
Sbjct: 129 SQTVKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQK 188
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +EK F
Sbjct: 189 AFEYGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKEKEFI 248
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
KS + + E+L K I+ + +T+ +A + KA ++LR +S + L +
Sbjct: 249 KSVLLNKNPDTEDLIKVKNIVESYGGIEETKQKAKDFVDKAIENLRVFGNSEDVEELESL 308
Query: 314 VDFCLQR 320
F ++R
Sbjct: 309 AKFIIER 315
>gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
Length = 340
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 139/321 (43%), Positives = 198/321 (61%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +L +D+ V L+ +R S V IPD+ YLI +GGKRLRP++TLA A +
Sbjct: 18 MDTLTELVAEDLSSVEALLSERAISSVATIPDMSAYLIGAGGKRLRPLITLAAAYAAGGK 77
Query: 61 GDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G + LA A+E+IHTATLLHDDVVD+S LRRGK AA+++WGN S+LVGDFL ++AF
Sbjct: 78 GSAPLHSLAAAVEYIHTATLLHDDVVDESDLRRGKKAAKMLWGNSASILVGDFLFARAFT 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+++ET+S L+ LS +C +AEGE++QL+ D+ EDY+ ++++KTA LF AA
Sbjct: 138 LMVETRSLRILDILSNASCVIAEGEVKQLAAIGKADLPIEDYMDIVEAKTAALFEAAARA 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L + L YG LG AFQLVDD LDY G + +GK++G+DFR GK TLPV+
Sbjct: 198 GALTVVAEGKESDGLAEYGRRLGRAFQLVDDALDYDGSTSVIGKSVGDDFREGKLTLPVL 257
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA + G + FW ++ K + +L A +R+ + T A KAK +L
Sbjct: 258 LAREHGDADARAFWDRAMDVSKQTEADLDIAIDYIRKADTVKATLDAARDEVAKAKAALE 317
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP S + +L ++ DF + R
Sbjct: 318 VLPSSEYVDALADIADFVVDR 338
>gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
Length = 322
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 126/321 (39%), Positives = 191/321 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ ++ D+++V + SDV +I V +Y++ SGGKR+RP L L A + +Y+
Sbjct: 1 MQAALNIIGDDLKRVEQQFRTDLESDVPLIRKVGEYVLSSGGKRVRPALLLLAARLCDYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD V LA IEFIHTATLLHDDVVD + LRRG +A +WGN+ SVLVGDFL S++F +
Sbjct: 61 GDKAVPLASVIEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S + L+ LS +AEGE+ QL + L++TEE Y+ V++SKTA+L SAA E
Sbjct: 121 MVAVGSLDILKVLSDATTVIAEGEVMQLLCTGELELTEERYIDVVRSKTAILMSAACEAG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G RQAL +GMNLGIAFQL+DD LDY E GK+IG D GK T+P+I
Sbjct: 181 AILGGAAPERRQALSDFGMNLGIAFQLMDDTLDYIATEEEFGKSIGHDLEEGKITMPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T E++ + + +++++ ++ +++ + T A Y Q DSL
Sbjct: 241 VLRHCTPSERDQIATVVEKDEMTLDEFRQVSGLVQRYGGIDYTVDAARRYIQGCADSLSL 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+L+++ + + R
Sbjct: 301 FASGPVADALLDLAGYVVTRS 321
>gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815]
gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
Length = 330
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 180/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L R
Sbjct: 13 NLLAPIAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGDRTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 YRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++G + A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LSGADATTEAAAAEFGRRIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G + F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDEIFEAITRSGALDHTLECAKQEAQAAATAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 311 SSIYKESLLNLCSYSTTRQS 330
>gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
HF10-11A3]
Length = 327
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 10 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 69
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 70 LTSKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 129
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 130 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSSKA 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 190 AGVLSGLNDEHLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 249
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + K IN ++L A I+ ++A+ + A + +K++L
Sbjct: 250 YALEENKKLSV-----LINRELAEKDDLDDALSIIMNSKAIESSRKLAEDFAMLSKEALV 304
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 305 WLPDSEYKRALMALPEFVLSRI 326
>gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
Length = 325
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 169/323 (52%), Gaps = 4/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
++ ++ ++ME + + S+V ++ + +++ GK++RPM A ++
Sbjct: 4 VERIKVPIYQEMELFEEKFTQSMFSNVALLNRITHFIVNRKGKQMRPMFVFLVAKLVGNG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+
Sbjct: 64 KVNERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ IE + + L+ +S+ +++GEL Q+ ++NLD+TE Y +I+ KTA L ++
Sbjct: 124 LLSIENEDFDLLKIISVAVREMSQGELLQIEKARNLDITETIYYEIIRQKTATLLASCCA 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + +G LG+AFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 LGAQSVNATVEEVEKMHHFGEVLGMAFQIKDDLFDY--GDQKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I +K EK + + + +K+ ++EN L + +Y ++A L
Sbjct: 242 IYTLNVVSKAEKKALINIVKNKNKDKAKVKELIATVKENGGLDFAIKKMETYRKEALQIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
P S ++ +L ++++ ++R
Sbjct: 302 FEFPKSEYRDALELMLNYVIERK 324
>gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
Length = 325
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ K+++ L K + D ++ ++++ GGKR+RP+L L A
Sbjct: 4 LSIIKSPISKELDDFISLFNKALTHDDGLLAKALEHIRNRGGKRMRPLLMLLMAKNFGEV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TFVAQHAAIGLELLHTASLVHDDVVDESVQRRGQASMNATYNNKVAVLVGDYILSTALLN 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T+S + + L+ + TL+ GE+ QL+ N +++EE Y VI KTA LF A +
Sbjct: 124 VAYTQSDDIVRDLAELGRTLSNGEILQLTNISNQEISEEVYYQVINQKTAALFEACAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A + +G +GI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 184 AKAGRASEEAIEAARLFGQRIGIIFQIRDDIFD-YYDSTEIGKPTGNDMAEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + +G +S E + + +++ + E + + A +
Sbjct: 243 ALKSTNNTAMMDLAMKVKEGNVSAEEIAQLVAFTKQSGGIDYAEQKMMEFHSDAMKFITT 302
Query: 301 L-PDSSWKKSLMEVVDFCLQRLN 322
D KSL +DF +QR N
Sbjct: 303 YVKDVEIAKSLQAYLDFVIQRKN 325
>gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
Length = 343
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 104/321 (32%), Positives = 183/321 (57%), Gaps = 3/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
++ + D ++ + + S V+++ V +++I +GGKR+RP++TL + + + +
Sbjct: 23 DIQQIIADDFAIMDKQVFGSLNSKVQLVMSVSQHVINAGGKRMRPLITLLCSRLCRDEQS 82
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + LA E +HTATL+HDDV+D+S LRRG A W N T+VLVGD+L+++AF ++
Sbjct: 83 EDAMHLAAITEMLHTATLVHDDVIDESGLRRGHPTANATWDNPTAVLVGDYLIARAFNLL 142
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S L+ S C +AEGE+ QL N TE+DY+ +I KT+ LF A +
Sbjct: 143 VGFQSLPLLKLFSDGTCDIAEGEVLQLQHQHNPQATEDDYMRIIDGKTSRLFMMATCGVA 202
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + Q +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I+A
Sbjct: 203 IL-QDKPEFMQPFSDFGQHFGNAFQIIDDVLDYTGDSEVMGKNLGDDLAEGKPTLPTIVA 261
Query: 242 FQRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + ++ + + ++ + +++E+ AL RA + A+ +L
Sbjct: 262 LRLLKQSDEANYNKLRIAVQTGKVDDAQGLIKLVQESDALEYCRERALEETRLAQQALSQ 321
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ +++ L ++ + RL
Sbjct: 322 LPDNQYRQGLWQLTELASARL 342
>gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
Length = 320
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 165/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L +++++++ + R+ +D +I + L+ +GGKR+RP L +A E +
Sbjct: 3 LKRLYRHMNREIDQIDQFLSTRVRTDHPVIESASRQLLDAGGKRIRPAFVLLSAGFGETK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A ++E IH A+L+HDDV+DD+ LRRGK + ++ G+ L +A +
Sbjct: 63 DIRLTKVASSLELIHMASLVHDDVIDDAMLRRGKPTVMERYDETVAMYTGNTLFGEAIRL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E S E + ++ + GE+ Q+ + + YL I KTA+L +
Sbjct: 123 VSEIDSPEVMRIMADTMERICVGEINQIQDQYEWGQSPKRYLDRIARKTALLIETSCAAG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+G + L +G ++G+AFQ+ DD+LD+ + ++GK +GED ++G TLP++
Sbjct: 183 AVISGASPQTVKQLSLFGYDIGMAFQMTDDLLDFTAKSFQLGKPVGEDLKHGHKTLPLLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ + D +++ +++ ++ N L ++ Y +A L
Sbjct: 243 SSEDPDFYERLRQVNASTDAEVTKSLVRE----VQRNGTLERSQRTIDRYVNRAIRRLDG 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K+SL+E+ + +R
Sbjct: 299 LPDVPDKRSLIEIAQYIGKRK 319
>gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
Length = 324
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 169/321 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + ++ + S ++ V +Y++ GK++RP + L +A +
Sbjct: 3 IKDVTASVADEIALFQEKYRVVLHSRNTLVDKVSRYVLKQQGKQIRPAIVLLSANLCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD++L++
Sbjct: 63 NESSYRAAIMVELLHSATLIHDDVVDGAEMRRGLPSINALWKNKISVLMGDYMLARGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L +S ++EGE+ Q+ +++LD+TE+DYL VI KTA L S++ +
Sbjct: 123 SLDHNDYGFLHMVSEAVRRMSEGEILQIQKTRSLDITEKDYLSVISDKTASLISSSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A S ALK+YG LG+AFQ+ DD+LDY G+ GK +G D ++ K TLP+I
Sbjct: 183 AMSATTDESNIAALKNYGEYLGLAFQIRDDLLDYTGDSKTTGKQMGIDIKDKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E+ +S + + + +R L A ++ A S+
Sbjct: 243 ALSQSSATEQRHIRSILKSARKRAIKSPEVIDFVRTKGGLEYAATVAENFASNAVQSISH 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P+ S K SL+ +VDF + R
Sbjct: 303 FPEGSAKTSLLRLVDFVMMRQ 323
>gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399]
gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399]
Length = 321
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 167/320 (52%), Gaps = 4/320 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
+ D+ +D+ + + + SD ++ D+ +L+ SGGKRLRP L L A ++ D
Sbjct: 1 MFDVIEEDLTVLEAALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARAGADFDRD 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMV 121
+ +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF +
Sbjct: 61 RAMPIAVALELIHTASLVHDDVIDEADTRRGSATTNAKWGNQVAILSGDYIFARAFKQVA 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S L+ + CTL+EGE+ Q + V+E+ Y I+ KTA E+ +
Sbjct: 121 RVGYSSHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERIRKKTADFLEICCELGA 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I G+ YG +G+AFQ+ DD+LD + +GK G D G TLPVI A
Sbjct: 181 GIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQTAERIGKPAGRDLAQGYVTLPVIRA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RC 300
++ + + I + K+S E + +A ++R + T+ +A +Y +AK +L
Sbjct: 241 LSVLDEKARAELTALITNPKMSEEEVARALALVRATDGIDYTQEQADAYLARAKSALPAS 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L D +++ + DF +R
Sbjct: 301 L-DPRIRETCLMAADFIGRR 319
>gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
Length = 334
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 172/320 (53%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ +++ +V+ + + + +DV ++ +V +L+ GK RP L L ++ +
Sbjct: 15 LRDIQAPVQEELSQVSGELWRIVAADVPLVREVQDHLMGMKGKLFRPTLLLLSSSIEGRS 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +H ATL+HDD VD SALRRG ++ +Q SV++GDFL +A
Sbjct: 75 PKRAITFAAVVELMHLATLVHDDAVDHSALRRGMPTVNSLFSHQVSVIMGDFLYLRALRE 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ EA+ +++ + + GE+RQLS L E DY +I++KTA LF AA +V
Sbjct: 135 LVTIGDLEAMRSITNASNEMTLGEIRQLSAYDALAFGESDYETLIRAKTATLFMAACDVG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L R+A+ +G LG+AFQ+ DD+LDY + GK G D + K TLP+I
Sbjct: 195 ALS--GAPRYREAVTRFGERLGMAFQVADDLLDYTEQQEMTGKPSGLDLKEHKVTLPLIA 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + ++ + E + + I+R++ L RA + ++A+++L
Sbjct: 253 ALREMPSSARARVEALFASLEPEDEAIAEVVAIVRDHGGLEYARQRADQFSREAEEALAD 312
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+ K +L++ + + ++R
Sbjct: 313 LPEGPAKTALLDSIAYVVER 332
>gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21]
gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21]
Length = 328
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 92/326 (28%), Positives = 164/326 (50%), Gaps = 11/326 (3%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D+ K ++ I + + D E + ++LI +GGK++RP + + +A+ + +
Sbjct: 5 DILKKYSSDIDEEIQNSLSTVDPEELKKSTQHLIKAGGKKIRPSMVVLSAIAVGGAPEEA 64
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A+E IHT +L+HDD++D+ +RRG+ + ++WG ++L GD L S+AF V+ET
Sbjct: 65 LKTAAAVELIHTFSLIHDDIMDEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAFETVLET 124
Query: 125 KSQEALEALS--------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ EG+ + N +V+EE Y+++I KT L +A+
Sbjct: 125 PIDNVSYERVVGALKTVVDSCIKICEGQASDMCFEGNFEVSEEAYMNMIYKKTGALIAAS 184
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ ++I G + L YG +G+AFQ+ DD LD + ++GK +G D GK TL
Sbjct: 185 TKSGAIIGGGTPEQVELLSEYGRLVGLAFQIQDDYLDVMSDEQDLGKPVGSDVVEGKMTL 244
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
V+ A + + +K S + N+ +A + + ++ + A AK
Sbjct: 245 MVVNALSKASPEDKKELISILEAE--DDTNVTRALELFNKYDSIDYAKNIALDNINTAKS 302
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L LPDS K+SL + DF ++R++
Sbjct: 303 LLDELPDSEAKESLSMIADFVVERIH 328
>gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 353
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 119/318 (37%), Positives = 191/318 (60%), Gaps = 2/318 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +V+ +I + + S+V +I + Y+I +GGKRLRP++T+ + L D
Sbjct: 37 FQQNLAADLGRVDVVINRAVQSEVALISQIGTYIISAGGKRLRPVITILSGRALGCDNDG 96
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 97 LYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 156
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V +++
Sbjct: 157 SGSMKILEVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQVGAIL 216
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG AL+ YGM +G AFQ++DDVLDY G+ ++GKN+G+D GKPTLP+I
Sbjct: 217 AGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGDPEQIGKNVGDDLAEGKPTLPLIYLMN 276
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+G++ ++ + + S +K + + AL +A + KA L LPD
Sbjct: 277 QGSQAAAADVRAALQNADRSY--FEKIHAHVAASDALSYCIEQAKAAAGKAAACLDVLPD 334
Query: 304 SSWKKSLMEVVDFCLQRL 321
+ +++ ++ + + R+
Sbjct: 335 NEATRAMRQLAEVSVARV 352
>gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 97/327 (29%), Positives = 167/327 (51%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L D++ +N + K + +D M+ K + +GGKR+RP L +
Sbjct: 34 LADLVAPVSDDLQLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQL 93
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ H LA E IHTA+L+HDDV+D+S RRGK +G + +VL GDF+
Sbjct: 94 SNIQELRPQHRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFMF 153
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE++Q + +VT ++YL KTA L +
Sbjct: 154 AQSSWYLANLDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNYLDKSYYKTASLIA 213
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ + +++ + +SV + YGM+LG+AFQ+VDD+LD+ ++GK G D G
Sbjct: 214 SSTKSAAIFSDSTSSVSNQMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDLSKGNL 273
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PV+ A ++ + + I+ +L+ A ++ + A G A
Sbjct: 274 TAPVLFALEKEPEL-----RELIDSEFTEEGSLEAAISLVHRGGGIDRARALAQEQGNLA 328
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
K SL CLP ++SL ++VD+ L+R+
Sbjct: 329 KKSLECLPQGDTRRSLEKMVDYVLERI 355
>gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 322
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 165/321 (51%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L D +++ ++N + + + ++ +V ++++ SGGKRLRPMLT+ TA L Y+
Sbjct: 1 MSKLSDFFSRELPRINATLEQELAQLNPLVKEVGEHILLSGGKRLRPMLTILTARCLGYQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LAC++EF+H+ATL+HDD++D + RRG+ A L +G +VL GD LL+ A +
Sbjct: 61 DQDIYPLACSLEFLHSATLIHDDILDSADTRRGQTACHLAFGLHRTVLAGDALLALANLI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V ++ A GE+ +++ ++ YL +I+ KTA L AA
Sbjct: 121 VARYDIPAMNYCVAQAIMRTATGEVEEIAQIRSPRPDRTAYLEIIQGKTADLIRAACSCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A S+G N+G+AFQLVDD LDY + +GK +G D R GK TLP+IL
Sbjct: 181 AMLARADQERLDHADSFGFNVGMAFQLVDDALDYAADHELLGKPLGGDLREGKITLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q K ++ + + +++ ++E A Y Q A +L
Sbjct: 241 YLQTLQKDQQGEILHKMAHDLLCDHEMQQIIGQIQEMGLDTKVREEAGKYLQLAGQALES 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PD+ K L E+V+ R
Sbjct: 301 FPDAPEKYLLQEIVEVVRSRK 321
>gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
Length = 327
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ + + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 10 SLFSPVEDDLRLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDSD 69
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ALRR ++ N+ +VL GDFL +Q+
Sbjct: 70 ITPRHRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSW 129
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE+ Q + +T + YL KTA L + + +
Sbjct: 130 YLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDTSLTLDAYLDKSYYKTASLIANSAKS 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ V +L +YG LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 190 AAILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPAL 249
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E + K+ I E+++KA I+ E++ + + A + Q A L
Sbjct: 250 FAM-----EETPYLKTLIEREFSEEEDIEKALSIITESQGIARSRELASYHAQLALKQLD 304
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S + +SL ++VD+ L RL
Sbjct: 305 CLKPSQYSQSLTDLVDYVLSRL 326
>gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
Length = 330
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 179/320 (55%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECAKQEAQAAATAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS +K SL+E+ + R +
Sbjct: 311 DSIFKDSLLELCSYSTARQS 330
>gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
Length = 323
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ ++ + K + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFAPVETDLRLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPAIVLLVSKATMLDQE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 ITSRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE++Q + +T + YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEIQQGINQFDTGITLDAYLEKSYYKTASLMANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+S+++ V + + L +YG LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 ASVLSDVGRDITEHLYNYGRYLGLAFQIVDDILDFTSPTEVLGKPAGSDLASGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E + + I +L+KA ++ E+ + + A +Y Q A +L+
Sbjct: 246 YAM-----EENPYLEVLIEREFSEDGDLEKALNLVMESNGIERSRELASNYSQLALQNLK 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S ++L ++VD+ L R+
Sbjct: 301 CLQPSPSGQALQDIVDYNLSRI 322
>gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR]
gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR]
Length = 323
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 113/321 (35%), Positives = 167/321 (52%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
K L D+ V + K + +++ + +L+ +GGKRLRP L +Y
Sbjct: 4 KELFGEIRHDLVLVEKELKKIANLPEEKLLSETSGHLLNAGGKRLRPAFALLAGKTFQYD 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + LA A+E IH ATL+HDDVVD S RRG + WGNQ SV GDF+ Q+
Sbjct: 64 LEKLLPLAVALELIHMATLVHDDVVDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQSLIQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + E L+ V+ ++EGE+ QL + + + DYL IK KTA+L SA+ E+
Sbjct: 124 IARCNNTKIAEILADVSVKMSEGEIVQLRTTFDPKQSLRDYLFRIKRKTALLISASCELG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG + +AL+ YG LG+AFQ+ DD+LD E E+GK +G D R G TLPVI
Sbjct: 184 ALAAGAPENFIRALRWYGYYLGMAFQITDDILDLIAEEKELGKPVGSDLRQGVVTLPVIF 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q+ K + + + +A +++ A+ + + Y KAK L
Sbjct: 244 ALQKS--PRKEWLAEVVGKPDKKEGEVLEAIDEIKKCGAIEYSFGVSQRYLIKAKQRLEI 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+S KKSL + DF R
Sbjct: 302 LPESHAKKSLALIADFINVRT 322
>gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus
NVH 391-98]
Length = 320
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++ + LI +GGKR+RP+ L EY+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGEYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAALLRRGSATVNANWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ ++
Sbjct: 123 ITNLEVPEAHQALSYTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K K + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDSKLREKIVSVHENTTASEMKEIIHAIKMSPAIDRAFAFSERYLHKALEVIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R]
gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 350
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L M +V L+ + S + + D+V +L +GGKR RPM L + E
Sbjct: 33 ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++
Sbjct: 93 ENVIKAAVVVEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + ++ E Y +VI+ KT VL ++A + +
Sbjct: 153 SQLGTDTVAHFAETFGE--LVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGA 210
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A
Sbjct: 211 MHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYA 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T E + ++ ++ Y Y A L L
Sbjct: 271 LREDTPVGAELRDILNG-PLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRL 329
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS+ K++L + F ++R+
Sbjct: 330 PDSTVKEALRNLATFTVKRV 349
>gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 323
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLINELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISQDFT 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LAEGE++Q + T Y++ KTA L + + +
Sbjct: 126 HLANLDNVKVVKLLSRVIMDLAEGEIKQNLNRFDSAQTFSKYINKSYCKTASLIANSTKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++ +++ L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLCNLEDDKLNHLYEFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + IN + E+L A I+ ++A+ + A + +K++L
Sbjct: 246 YALEENENL-----SVLINRELVEKEDLNNALNIVMNSQAIKRSRKLAEDFALHSKEALL 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++L+ + +F L RL
Sbjct: 301 WLPDSEYKRALLSLPEFVLSRL 322
>gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 329
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 112/315 (35%), Positives = 177/315 (56%), Gaps = 1/315 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DL D+ V ++ S+V +I ++ +YL+ GGKR+RP+L L +A L +RG++ +
Sbjct: 14 DLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALHFRGESRI 73
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
L +E +HTATL+HDD++D + RRG+ ++ WGN VL GD+L Q+F + +E +
Sbjct: 74 RLGAVVEMLHTATLVHDDIIDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFQVAMEER 133
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L+ L + + EGEL Q+ + EE+Y +I KTA LF ++++ + IA
Sbjct: 134 NFHVLDLLISLTQQMVEGELLQIQKLG-RLINEEEYFDLIFRKTASLFRVSMQLGAAIAD 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L YG NLG+AFQ+VDDVLD E + +GK + D R GK TL VI A +RG
Sbjct: 193 APKEIEGQLGEYGRNLGLAFQIVDDVLDLTSEESTLGKPVASDLREGKATLAVIHALERG 252
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T E+ ++ + D + K I++ + +L A +Y + A+ L LPDS
Sbjct: 253 TGEEREAIRTVLADRSFNRVPHKTILAILKHHGSLDYAMDAARAYAEVARQCLTDLPDSE 312
Query: 306 WKKSLMEVVDFCLQR 320
K++L+ V F R
Sbjct: 313 AKRALLWVPGFVTSR 327
>gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
Length = 323
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 158/322 (49%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+ + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 6 SLFAPVDDDLRLLTNNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDEAELRRRVPTVNSLFDNRVAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE++Q + ++ YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEIQQGINRFDTSISLAAYLEKSYYKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ V L +YG +LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AGVLSEQSAEVNHHLYNYGRDLGLAFQIVDDILDFTSPTEVLGKPSGSDLISGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E ++ + I +++KA + ++ + ++ A YGQ A L
Sbjct: 246 FAM-----EENSYIEVLIEREFSQEGDIEKALDFIHSSQGIPRSKELADQYGQSALKHLE 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S K L+E+VD+ L R+
Sbjct: 301 CLASSPSKDVLIELVDYVLSRI 322
>gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3]
gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate
Synthetase From Pyrococcus Horikoshii Ot3
gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase
[Pyrococcus horikoshii OT3]
Length = 342
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 94/336 (27%), Positives = 158/336 (47%), Gaps = 17/336 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + + ++ I + I + + ++ +GGKR+RP + L + +
Sbjct: 5 EELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ A AIE IH +L+HDD++D RRGK +WG ++L GD L S+AF
Sbjct: 65 PLRAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEA 124
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ K LE + + L EG+ R L K VT E+Y+ +I KT LF A
Sbjct: 125 VARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGALFEA 184
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ +V +I +AL S+G N+GIAFQ+ DDVLD + ++GK +G D R GK T
Sbjct: 185 SAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKT 244
Query: 236 LPVILAFQRGTKREKNFWKSTIND-----------GKISVENLKKAFIIMRENRALVDTE 284
L V F+ +++K + + ++ +A ++++ ++
Sbjct: 245 LIVAHFFENADEKDKQRFLKIFGKYAGDVKGRGIIEEDIKSDVMEAIDLLKKYGSIDYAA 304
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +KA ++LR LP S + L + F ++R
Sbjct: 305 EIAKDMIKKANEALRILPKSKARMDLELLAKFIVER 340
>gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II
[Streptomyces sp. Tu6071]
gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II
[Streptomyces sp. Tu6071]
Length = 326
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S V I + ++L+ +GGKR RP+L + A +
Sbjct: 4 QALEADVQAGLTAVEEGLLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEA 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N +VL GDFL S+A ++
Sbjct: 64 PGIVPSAVVVELTHLATLYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRASQIL 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++ + + ++ + YL V+ KT L + A +
Sbjct: 124 AGLGPEAVRIQAEAFER-LVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGA 182
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G + V + L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 183 MMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 242
Query: 242 FQRGTKR---EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R ++ E + + L +A +MR + AL A Y A+ +L
Sbjct: 243 RERIARQGLAEDVALDTLLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATL 302
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ LPD+ + SL ++ D + R+
Sbjct: 303 QALPDTPARTSLADLCDAVVHRV 325
>gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
SPB78]
gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
SPB78]
Length = 336
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQAGLTAVEEGLLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N +VL GDFL S+A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++ + + ++ + YL V+ KT L + A +
Sbjct: 134 AGLGPEAVRIQAEAFER-LVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G + V + L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 252
Query: 242 FQRGTKR---EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R ++ E + + L +A +MR + AL A Y A+ +L
Sbjct: 253 RERIARQGLAEDVALDTLLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ LPD+ + SL ++ D + R+
Sbjct: 313 QALPDTPARTSLADLCDAVVHRV 335
>gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
DSM 14838]
Length = 324
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ +++ L + S ++ +V+ ++ GK +RP+L L A +
Sbjct: 7 IKTPIAAELDDFKKLFDNSLTSSNFLLNEVISHIRQKNGKMMRPILLLLVAKLYGRICPE 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VLVGD+LL+ A V +
Sbjct: 67 SLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIYNNKVAVLVGDYLLATALVQVGK 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + ++ +S + L+EGEL QLS NL +EE Y VI+ KTAVLF+A + +L
Sbjct: 127 THNYAIIDVVSRLGQNLSEGELLQLSNVSNLQFSEEIYFDVIRKKTAVLFAACTKSGALS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
GV + + + +G +G+ FQ+ DD+ D + E+GK G D GK TLPV+ A
Sbjct: 187 VGVTDEQAEFARQFGEYIGLCFQIKDDIFD-YYDSKEIGKPTGNDMLEGKLTLPVLYALN 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +G S + + + ++ + ++Y +KA L LPD
Sbjct: 246 STKDESAEEIAVKVKNGTASADEIARLIEFAKQQGGIEYAVQTMFAYKEKALSLLASLPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
S K L +D+ + R
Sbjct: 306 SDVKAGLAAYLDYVVDR 322
>gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
Length = 323
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 159/322 (49%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + + ++ ++L +GGKR+RP + L +
Sbjct: 6 SLFAPVDDDLRLLTNNLKQLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLERE 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE+ Q + +T E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEILQGINRFDTTLTLEAYLEKSYYKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ + L YG +LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AAVLSDSPREMIDHLYDYGRDLGLAFQIVDDILDFTTPTEVLGKPSGSDLISGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ + ++ I +++KA +++ E++ + + A + Q A L
Sbjct: 246 FAM-----EEQPYLETLIEREFSEEGDIEKALLLVEESQGITRSRELAAHHAQLALKHLD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S + L ++VD+ L RL
Sbjct: 301 CLAPSPSAQVLKDLVDYVLSRL 322
>gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Atcc 13032
gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Complexed With Calcium
And Isoprenyl Diphosphate
Length = 360
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L M +V L+ + S + + D+V +L +GGKR RPM L + E
Sbjct: 35 ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 94
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++
Sbjct: 95 ENVIKAAVVVEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM 154
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + ++ E Y +VI+ KT VL ++A + +
Sbjct: 155 SQLGTDTVAHFAETFGE--LVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGA 212
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A
Sbjct: 213 MHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYA 272
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T E + ++ ++ Y Y A L L
Sbjct: 273 LREDTPVGAELRDILTG-PLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRL 331
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS+ K++L + F ++R+
Sbjct: 332 PDSTVKEALRNLATFTVKRV 351
>gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
Length = 336
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + + +
Sbjct: 14 QALETDVQAGLAAVEAGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLASRFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEADVRRGVESANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ YL VI KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVAHYLDVIAGKTGSLIAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L++G SV L YG LG AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 LMSGADESVVDILTQYGERLGTAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + DG ++ + + +R + AL Y + A+ +L
Sbjct: 253 REMAERDRRPEDLELVALLDGDLTDDARHAEVLARLRVHPALEQARRDTVQYAEDARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 APLPECFAKSALEELCDAVVHR 334
>gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum
ATCC 13032]
gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium
glutamicum ATCC 13032]
Length = 350
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L M +V L+ + S + + D+V +L +GGKR RPM L + E
Sbjct: 33 ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++
Sbjct: 93 ENVIKAAVVVEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + ++ E Y +VI+ KT VL ++A + +
Sbjct: 153 SQLGTDTVAHFAETFGE--LVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGA 210
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A
Sbjct: 211 MHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYA 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T E + ++ ++ Y Y A L L
Sbjct: 271 LREDTPVGAELRDILTG-PLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRL 329
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS+ K++L + F ++R+
Sbjct: 330 PDSTVKEALRNLATFTVKRV 349
>gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 394
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 170/327 (51%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + DM+++N + + + M+ + + +GGK+LRP++ A
Sbjct: 72 LSEILAPVTADMQQMNTNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHCTAQR 131
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + H LA E IHTA+L+HDDV+D+ +RRGK ++G + +VL GDFL
Sbjct: 132 EGLTELTEKHRRLAEITEMIHTASLVHDDVLDECDIRRGKQTINSMYGTRVAVLAGDFLF 191
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE+ Q + + D+T E YL KTA L +
Sbjct: 192 AQSSWFLANLDNLEVIKLISQVIADFANGEISQAASLFDTDITLEQYLDKSFYKTASLIA 251
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ + V++A+ +YG +LG+AFQ+VDD+LD+ ++GK G+D +G
Sbjct: 252 ASCRSAAVFSDSPVEVKEAMYAYGKHLGLAFQVVDDILDFTQTSEQLGKPQGQDLASGNL 311
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A ++ + I+ + +L++A ++ E + + A A
Sbjct: 312 TAPVIFALRKSPELLD-----IISSEFVEEGSLQRALQLVNETGGIEEARLLARQQADLA 366
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP+ S ++SL +VD+ L R+
Sbjct: 367 LSALECLPEGSSRRSLRLMVDYVLDRI 393
>gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
Length = 325
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 173/322 (53%), Gaps = 4/322 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ +++ +ME + S V ++ + +++ GK++RPM A M+
Sbjct: 4 VSQIKEPVAHEMELFEKKFHLFMSSRVALLNKITHFIVNRKGKQMRPMFVFLVAKMVSKG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D A IE IHTATL+HDD+VDDS RRG + +W N+ +VLVGDFLLS+
Sbjct: 64 EVNDRTYRGASVIELIHTATLVHDDIVDDSNQRRGFFSINALWKNKIAVLVGDFLLSKGL 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A
Sbjct: 124 LLSIDNDDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCS 183
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + ++ +G +G+AFQ+ DD+ DY ++GK G D + K TLP+
Sbjct: 184 LGAAAVRPGSKDVEDMRKFGELIGMAFQIKDDLFDY--GDQKIGKPTGIDIKEQKMTLPL 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A + +K++KN+ +++ + + + + ++ L + + + +A + L
Sbjct: 242 IYAINQASKKDKNWIINSVKNHNRDKKRVNEVIDYVKSVGGLSYAQIKMKEFQSEASEIL 301
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ PDS++K SL ++D+ + R
Sbjct: 302 QRYPDSTYKASLQLMIDYVIDR 323
>gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 305
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N + YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPVLRQK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
T + +++ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 ITSVHENSTASEIQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKPLPRGKAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 8102]
gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 8102]
Length = 323
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L D+E + + I + ++ ++L +GGKRLRP + L + L G
Sbjct: 6 ELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALSADGQ 65
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E ++ LS V LA+GE++Q + + E YL KTA L + +
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLADGEVKQGLFRFDTAQSFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ S L +G LG+AFQ+VDD+LD+ G ++GK D +G T P
Sbjct: 186 AGVLSDCSPSELDGLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPTF 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ ++ I +L +A ++R +RA+ T A ++ ++++D++
Sbjct: 246 YAM-----EEQPGLQALIAREFAEPGDLDQALEMVRSSRAIPRTRELAETFARESRDAIS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ DS K++L+E+ DF L RL
Sbjct: 301 WMSDSPCKRALLELPDFVLSRL 322
>gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 336
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + + +
Sbjct: 14 QALETDVQAGLAAVEAGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLASRFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEADVRRGVASANARWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ E YL VI KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVEHYLDVIAGKTGSLIAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L++G SV L YG LG AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 LMSGADESVVDILTQYGERLGTAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + DG ++ + + +R + AL Y Q A+ +L
Sbjct: 253 RETAARDGNADDLELVRLLDGDLTDDAVLADVLARLRVHPALEQARRDTIRYAQDARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L E+ D + R
Sbjct: 313 APLPECFAKSALEELCDAVVHR 334
>gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 323
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKR+RP + L + L G+
Sbjct: 6 ELLQPIEIDLEHLLKDLRDLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISKALSAEGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDV+D+++ RRG + ++ +VL GDFL +QA
Sbjct: 66 LSSKHRRLAEITEMIHTASLVHDDVLDEASTRRGVDTVHNRFDHKVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LAEGE++Q + + + + YL KTA L + + +
Sbjct: 126 HLANLDNLDVVKLLSRVIMDLAEGEVKQGIYRFDPNQSLDVYLEKSYCKTASLIANSAQA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ + + L ++G LG+AFQ+VDD+LD+ + ++GK D G T P +
Sbjct: 186 VGVLSNESDYHLKCLYNFGKQLGLAFQVVDDILDFTSDDKQLGKPAASDLSAGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E +K I + +L A ++RE+ A++ + A ++ + + +S++
Sbjct: 246 YAL-----EENPSFKELIIREFSNEGDLDHAMELVRESNAIIRSRKLAENFAKNSYESIK 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+PDS K++L+++ ++ L RL
Sbjct: 301 WMPDSPSKRALLDLPEYVLGRL 322
>gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
Length = 331
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ D+ V I + + I ++ YL GGKRLRP L L TA Y + +
Sbjct: 18 EPIRDDLAGVEVAIRRALDGPDPHIVELATYLQRGGGKRLRPALLLLTARNFHYDRERLL 77
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDD+VD + RRG + WG T+VL GDFL ++AF ++
Sbjct: 78 PVAAAVELIHMATLVHDDIVDGATSRRGLPTVNVRWGTGTAVLTGDFLFARAFSLLAADG 137
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ ++ GE+ Q + + EE Y I KTA S + L+ G
Sbjct: 138 DNRVVRVMAEAVYEMSTGEIEQQAQLFDPAAGEEGYYRRIYKKTAHFISHCCLMGGLMGG 197
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+AL+ YG +G+ FQ++DD+LD G ++GK G D R+G TLPV+ A
Sbjct: 198 APERQVEALRRYGYGIGMGFQVIDDILDLTGNPEQLGKPRGTDLRSGVLTLPVLFA---L 254
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + + + ++ +++ + + RA + A ++L L ++
Sbjct: 255 AKDPQPWLLERLAARQVDDATVERVTEWVEAVGGIAYARRRAEQFISDALEALDELAEAP 314
Query: 306 WKKSLMEVVDFCLQRLN 322
L + F L+R N
Sbjct: 315 MAPHLRALARFILERNN 331
>gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock4-2]
gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock4-2]
Length = 305
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPVLRQK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
T + +++ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 ITSVHENSTASEIQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKPLPRGKAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
Length = 330
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 155/317 (48%), Gaps = 9/317 (2%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ I + + V + + YL +GGK LRP LTL T+ + DN + A AIE
Sbjct: 14 ISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIEL 73
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IHT +L+HDD++DD +RRGK A VW ++L GD L S+AF +++ + ++
Sbjct: 74 IHTFSLIHDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQ 133
Query: 134 SLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ EG+ +S DV+EE+YL +I KT L +AA + +++ G
Sbjct: 134 LSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGG 193
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V A+ YG +G+AFQ+ DD LD + +GK IG D GK T+ I A
Sbjct: 194 ANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGKPIGSDIAKGKMTIIAIKALAAS 253
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + D S E++ A + + A+ + A AK L LPDS
Sbjct: 254 EGEDNKKLLEILKDDNNSQEDIDVALDLFNKYGAIEYAKNVALENVTSAKKLLEILPDSE 313
Query: 306 WKKSLMEVVDFCLQRLN 322
K+ L ++ DF L+R +
Sbjct: 314 SKQMLFDLADFVLERHS 330
>gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Paulinella chromatophora]
gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Paulinella chromatophora]
Length = 323
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I +D ++ ++L +GGKR+RP + L + L GD
Sbjct: 6 KLLQPVESDLETLLSDLRNLIGADHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSPTGD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + ++ +VL GDFL +QA
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V LA+GE++Q N + E Y+ KTA L + +
Sbjct: 126 HLANLDNLEVVKLLSRVIMDLADGEVKQGLFRYNTRQSFETYIEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++A + L +G LG+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLADLNEEHLVQLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLVSGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK I +L++A ++R + A+ + A + ++A S++
Sbjct: 246 YAL-----EEKPMLADLIEGKFNQGIDLEQALELVRNSEAINRSRTLAEGFAREAHKSIQ 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S +L+ + DF + RL+
Sbjct: 301 WLPSSEACNALLALPDFVISRLS 323
>gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 355
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L MEK L+++ + + D VK+L +GGKR+RPM L + E G
Sbjct: 37 DELNSFVADGMEKCEKLLIRELDQGASFVTDKVKHLALAGGKRVRPMFALLASRYGERPG 96
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A +E H ATL HDDV+D++ RRG +A W N ++L GDF+LS A +
Sbjct: 97 CDDVIKAAIVVEMTHLATLYHDDVMDEAEKRRGADSANFRWNNSVAILAGDFILSAASRL 156
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ A + ++ E YL+VI KTAVL +A +
Sbjct: 157 MASLG--VKTVKHFSEAFGDLVTGQMRETIGATSGDEIEHYLNVIHEKTAVLIRSAGFLG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG ++QAL ++G +LG+ FQ+VDD++D + +E GK G D R G TLP++
Sbjct: 215 AMHAGTPAPIQQALATFGEHLGMVFQIVDDMIDIFSDTSESGKTPGTDLREGVHTLPMLY 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + K + + + ++++A ++ A T + + A +L
Sbjct: 275 AMEGDRKENQRLREML-RSPLSTDADVEEALALIAATDARARTVAKVEEHADAALKALEA 333
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+S +L ++ F + R+
Sbjct: 334 LPDNSTTNALRALLGFTMARV 354
>gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 305
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPVLRQK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
T + +++ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 ITSVHENTTASEMQEIIDAVKNSPAIDQAFAFSERYLHKALEIIKPLPRGKAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 322
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 117/308 (37%), Positives = 168/308 (54%), Gaps = 2/308 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + L DM VN +I +++ S V IP + YLI +GGKRLRP++ L A M R
Sbjct: 3 LEEVNRLVRADMAAVNSVIQEQLRSGVPTIPAMGTYLINAGGKRLRPIVLLLAARMGGER 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G + LA +EFIHTATLLHDDVVD S LRR A WGN +VLVGDFL +++F M
Sbjct: 63 GPRPISLAAVVEFIHTATLLHDDVVDGSELRRSNATANQRWGNAAAVLVGDFLYARSFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L ++ +A+GE+ QL + + D++ E Y VI++KTA LF AA +
Sbjct: 123 MVQDGDMRILATMAEATSVIAQGEVAQLENANDPDLSPEAYFAVIEAKTAKLFEAAARIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+ + + +AL YG LGIAFQL+DD LDY +MGKN G+D GK TLP I
Sbjct: 183 ALVNELDAAAEKALAQYGSLLGIAFQLMDDALDYSTSAEKMGKNRGDDLAEGKATLPYIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q T E+ + ++ + + I+ ++ T A +A L
Sbjct: 243 AMQHATAAEQAILREALSGN--APAVFGTVWEIIARTGSIDYTLRVAKEKADQAIACLSG 300
Query: 301 LPDSSWKK 308
P K+
Sbjct: 301 FPAGMEKE 308
>gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
Length = 336
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQVGLTAVEEGLLEATKSEVAFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL S+A +
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAEVRRGVDSANTRWGNSVAVLTGDFLFSRA-SHM 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ E YL V+ KT L + A +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVEHYLDVLAGKTGSLVAVACRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSRESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + L +A +RE+ AL Y + A+ +L
Sbjct: 253 RERAERLGLPADVALCELLDSDLAEDARLAEALERLREHPALEQARRDTVRYAEDARSAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ + KK+L E+ + + R
Sbjct: 313 APLPECAAKKALTEMCELVVHR 334
>gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
Length = 336
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L S V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQAGLTAVEEGLLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N +VL GDFL S+A ++
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEATVRRGVESANARWDNSVAVLTGDFLFSRASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++ + + ++ + YL V+ KT L + A +
Sbjct: 134 AGLGPEAVRIQAEAFER-LVTGQILETAGPQDGRDPVDHYLDVLSGKTGSLVAVATRYGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G + + L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGAGSEAVEILTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + G ++ + L +A +MR + AL A Y A+ +L
Sbjct: 253 RERVARLGLAEDVALDTLLRGDLTEDAKLAEAVALMRAHPALAQASEDAARYAHDARATL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ LPD+ + SL ++ D + R+
Sbjct: 313 QALPDTPARTSLADLCDAVVHRV 335
>gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9312]
gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT
9312]
Length = 323
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 166/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + F + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTNKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ + + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + K IN ++L +A I+ ++++ + A + +K+++
Sbjct: 246 YALEENKKLSV-----LINRELAEKDDLDEALNIIMNSKSIESSRKLAEDFAMLSKEAII 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++L+ + +F L R+
Sbjct: 301 WLPDSEYKRALLALPEFVLSRI 322
>gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
Length = 336
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +E + V +L+ S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QAVEADVQAGLAAVEEGLLEATKSEVPFITEAAQHLVKAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++A+RRG +A WGN +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAAVRRGVASANTRWGNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A +R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLPEDVALCELLDSDLTDDARHAEALAALRAHPALEQARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+++ D + R
Sbjct: 313 APLRECDAKAALLQLCDAVVHR 334
>gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
Length = 327
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 186/320 (58%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L++L +D+E++ LI+ SD+ I D++ +L+ SGGKR+RP++ LA ML +
Sbjct: 9 LADLKNLVSEDLEEMERLIVTTSNSDISYITDIINHLMLSGGKRIRPIMLLAVCKMLALQ 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +L+A AIEFIH+ATLLHDDVVD S RRG + +WGN+ SVLVGDFLL+ AF
Sbjct: 69 DERRILIAAAIEFIHSATLLHDDVVDQSESRRGTKTSNSLWGNKASVLVGDFLLATAFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E L LS +CT+ GE++Q+ SK+LD+T E YL +I +KTA LFSA E +
Sbjct: 129 LVSCSNFELLTTLSRASCTIVTGEIQQMVYSKSLDITREKYLEIISAKTAALFSATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ R+ALK++G N GI FQ+VDD+LDY + + GK G+D NG+ TLP+I+
Sbjct: 189 GVLSESSFDDRKALKNFGHNFGITFQIVDDLLDYTAQHEKWGKTPGQDLSNGQVTLPMIM 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++ K + + ++ + A Y + L
Sbjct: 249 AYEEADYAGKEMLRGALAGR---PSDVASVHSYISSLNVAQKAIAFAAEYVDASHKFLEP 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
PDS +K L ++ LQR
Sbjct: 306 FPDSQYKSKLSALLRSALQR 325
>gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9301]
gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9301]
Length = 323
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFPKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E IN ++L A I+ ++A+ + A + +K+++
Sbjct: 246 YAL-----EENKQLSVLINRELAEKDDLDNALNIIMNSKAIESSRKLAEDFAMLSKEAIV 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 301 WLPDSEYKRALMALPEFVLSRI 322
>gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9515]
gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9515]
Length = 323
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 165/323 (51%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISRDFN 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LAEGE++Q + T Y++ KTA L + + +
Sbjct: 126 HLANLDNVKVVKLLSRVIMDLAEGEIKQNLNRFDSGQTFSKYINKSYCKTASLIANSTKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ +++ L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSNLEDDKLNCLYEFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + IN + E+L A I+ ++A+ + A + +K+++
Sbjct: 246 YALEENKNLSV-----LINRELVEKEDLNNALNIVMNSQAIQRSRKLAEDFAVLSKEAIL 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP+S +K++L+ + +F L R++
Sbjct: 301 WLPNSEYKRALLALPEFVLSRIS 323
>gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307]
gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307]
Length = 323
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 166/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E++ + I + ++ ++L +GGKRLRP + L + L+ G+
Sbjct: 6 QLLQPVESDLEQLLSDLRALIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALDPAGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ RRG + ++ +VL GDFL +Q+
Sbjct: 66 LSLRHRRLAQITEMIHTASLVHDDVVDEANTRRGVPTVHSRFNSRVAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E ++ LS V LAEGE+RQ + + E YL KTA L + + +
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLAEGEIRQGLFRYDTGQSLETYLEKSYWKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ ++ L S+G LG+AFQ+VDD+LD+ G +++GK D +G T PVI
Sbjct: 186 AGVLSELERDQLNQLHSFGRQLGLAFQIVDDILDFTGSDDQLGKPAASDLASGTLTAPVI 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E I ++L +A ++R+++ + A S +++ +L+
Sbjct: 246 YAM-----EEHPSLAVLIEREFSEPDDLDQALGLVRQSQGIQRARALAESMARESTTNLK 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S+ + +LME+ DF L RL
Sbjct: 301 FLPASASRDALMELPDFVLSRL 322
>gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)]
gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor
A3(2)]
gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 336
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLVAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++A+RRG +A W N +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLAEDLALCELLDSDLSDDARHAEALRLLRAHPALEQARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+E+ D + R
Sbjct: 313 APLRECDAKAALVELCDAVVHR 334
>gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
Length = 336
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V +I ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLTAVEEGLLEATKSEVPLITGAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVASANARWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G ++V L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGADDTVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLADDLALCELLDSDLTDDARHAEALRLLRAHPALEHARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+++ D + R
Sbjct: 313 APLRECEAKAALVQLCDAVVHR 334
>gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9303]
gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9303]
Length = 323
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 161/305 (52%), Gaps = 8/305 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHT 76
I + ++ ++L +GGKRLRP + L + L GD H LA E IHT
Sbjct: 23 RSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHT 82
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDDVVD++A RRG + ++ +VL GDFL +QA + + ++ LS V
Sbjct: 83 ASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRV 142
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
LA+GE++Q + + YL KTA L + +++ + +++G +++L
Sbjct: 143 IMDLADGEVKQGLYRYDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKSLHH 202
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G LG+AFQ+VDD+LD+ G ++GK D +G T P + A E
Sbjct: 203 FGRQLGLAFQVVDDILDFTGSEQQLGKPAASDLASGYLTAPALYAL-----EEHLALARL 257
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
I ++L +A ++R ++A+ + A + +++++++ LPDS +++LME+ DF
Sbjct: 258 IEREFSEEDDLDQALELVRNSQAISRSRQLAEDFARESREAIAWLPDSPCQRALMELPDF 317
Query: 317 CLQRL 321
L RL
Sbjct: 318 VLSRL 322
>gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
Length = 327
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 189/321 (58%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y GD
Sbjct: 6 KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+H+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 SHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + +++GE+ QL + + I LF A+ V +
Sbjct: 126 ASGSIKAMNVLAKASAIISKGEVVQLVKLNERRLINIEEYQQIVKSKTAELFGASCSVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + K +K K+ I + E + +M +++ D S +A L +
Sbjct: 246 YDKLEKDDKAHLKNMIKSDNRTKEEFVQICDLMVKHKISKDIINHLNSLENEAISLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K+ L ++ F L R
Sbjct: 306 PVQNIYKEYLFSIIRFILDRS 326
>gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens]
Length = 336
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLVAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++++RRG +A WGN +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEASVRRGVPSANTRWGNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y + A+ +L
Sbjct: 253 RERAARLGLAEDVALCELLDSDLSDDARHAEALRLLRAHPALEQARKDTVRYAKDARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+E+ D + R
Sbjct: 313 APLRECEAKSALVELCDAVVHR 334
>gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 165/327 (50%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + + DME++ + + ++ + +GGKRLRP+L A
Sbjct: 3 IDAITAPVMADMEQMRMNLRDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARSTAQL 62
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ D LA E IHTA+L+HDDV+DD RRG ++G + ++L GDFL
Sbjct: 63 MDMPEITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRGAQTIHTLYGTRVAILAGDFLF 122
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A+GE+ Q N DVT E YL +KTA L +
Sbjct: 123 AQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEGYLEKSHNKTASLIA 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V ++ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G
Sbjct: 183 ASCKSAAVFSEVSEDIKVDMYEYGKHLGLAFQVVDDILDFTQTEEQLGKPQGQDLASGNL 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P I A +R ++ + + +L+KA I+ E + D A A
Sbjct: 243 TAPTIFALRRDASL-----RALVESQFKTEGDLEKAIAIVNEVG-IEDARTLAREEADMA 296
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+ LP+ K+SL+++V + L+R+
Sbjct: 297 LAALKGLPEGEAKQSLVDMVQYILERI 323
>gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
Length = 323
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEY 59
L D+ ++ + I + ++ ++L +GGKRLRP + L +
Sbjct: 6 SLFASVEADLYLLSENLKNLIGASHPILYAAAEHLFGAGGKRLRPAIVLLVSRATITNSK 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDV+D+S +RR ++ N+ +VL GDFL Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVIDESDVRRTVPTVNSLFNNRIAVLAGDFLFGQSAW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V +AEGE++Q + T E YL +KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIKDMAEGEIQQGLSRFDTTTTIEGYLAKTYNKTASLMANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++GV + V + L YG NLG+AFQ+VDD+LD+ + +GK G D +G T PV+
Sbjct: 186 AGCLSGVSDQVAENLYHYGRNLGLAFQIVDDILDFTASTDVLGKPAGSDLVSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + + I E+ ++A ++R+++ + + A Y Q A ++
Sbjct: 246 FAL-----EEKPYLEVLIEREFAQPEDKEQALALVRDSKGIQRSREMAAKYAQAAVKNIS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S K++L+++ D+ L RL
Sbjct: 301 VLKPSESKQALIDLSDYVLSRL 322
>gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
Length = 323
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ D+ + SD ++ + Y++ GK++RPM A +
Sbjct: 4 INQIKEPIAADISSFEEKFKSSMHSDAPLLDRITHYIVKRKGKQIRPMFVFFAAKLCGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTATL+HDDVVD++ RRG + +W N+ +VLVGD+LL++ +
Sbjct: 64 LESTHRGAALVELLHTATLVHDDVVDNAYERRGFFSINALWKNKIAVLVGDYLLAKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ +S ++EGEL Q+ + +D++E+ Y VI+ KTA L ++
Sbjct: 124 SVNNGEFRLLQIVSEAVKQMSEGELLQIEKVRRMDISEDLYFDVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + + ++ +G +GIAFQ+ DD D+ +++GK +G D + K TLP+I
Sbjct: 184 AASAGADDETIEKMRLFGEKVGIAFQIKDDTFDFGT--DDVGKPLGIDIKEKKVTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A K EK + + + +++ + + R Y Q+A D L
Sbjct: 242 ALNSSDKVEKKRIINLVKNHNDEPAKIQQIIDFVNAKEGVRYANERMVQYQQEAFDILYS 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ L ++V + +R
Sbjct: 302 FEPGPARTGLEQLVRYTTERK 322
>gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. AS9601]
gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. AS9601]
Length = 323
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E IN ++L A I+ ++A+ + A + +K+++
Sbjct: 246 YAL-----EENKQLSVLINRELAEKDDLDDALSIIMNSKAIESSRKLAEDFAILSKEAIV 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 301 WLPDSEYKRALMALPEFVLSRI 322
>gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
Maries]
gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
Maries]
Length = 327
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 121/320 (37%), Positives = 185/320 (57%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L L+D++ + LI+ SD+ I D++ +L+ SGGKR+RP+L LA ML
Sbjct: 9 LIDLKSLVLEDLQAMEQLIVDTSNSDISYIADIISHLMLSGGKRIRPILLLAVCKMLALA 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF
Sbjct: 69 DERRIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E +
Sbjct: 129 IVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+
Sbjct: 189 GVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIM 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++ K + + +++ A + + A Y A L
Sbjct: 249 AYEEADSAGKEMLRGALAGRT---ADIETAHSYITSLNIVQKATKFAAEYVDAANRFLEP 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S K L +++ LQR
Sbjct: 306 FPNSQCKSKLSALLNSALQR 325
>gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
Length = 333
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 149/322 (46%), Positives = 209/322 (64%), Gaps = 1/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DM VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA + Y
Sbjct: 12 DRMAAYLESDMAAVNTLIRERMASKHAPRIPEVTAHLVDAGGKRLRPMLTLATAHLCGYD 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +
Sbjct: 72 GPFHINLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ET S L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV
Sbjct: 132 MVETGSLRVLDILANASATIAEGEVLQLTASQNLATTEEIYLQVVRGKTAALFSAATEVG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+IAG + AL YG LG+AFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I
Sbjct: 192 GVIAGAPDDQVAALFEYGDALGVAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIK 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E+ FW TI GK +L+ A ++ ++ AL DT A + +AK +L
Sbjct: 252 AVAKADAEERAFWVRTIEKGKQEESDLQHAIDLLHKHAALFDTSVVARAEAARAKAALAP 311
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP K L+++ D+ ++R+N
Sbjct: 312 LPAHPVKDMLVDLADYVVERIN 333
>gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 340
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L +D+++V L+ K + + + + V +L +GGKR RPM + + +
Sbjct: 23 ELAATVSRDLQRVEELLQKELNHGEDFVNEKVIHLAAAGGKRFRPMFAVLASQLGTRASC 82
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A +E H ATL HDDV+D++ RRG +A WGN ++L GD LL+ A ++
Sbjct: 83 EDVIKAATVVEMTHLATLYHDDVMDEADRRRGVESANARWGNSVAILAGDILLAHASRLM 142
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + ++ E YL+V+ KT VL S+A + +
Sbjct: 143 ATLGTDTVAHFAQTFG--DLVTGQMRETVGPGDGDKIEHYLNVVHEKTGVLISSAGYLGA 200
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L G + +AL+ +G+ +G FQ+VDD++D + GK G D R G TLPV+ A
Sbjct: 201 LHGGCSPEITRALQQFGVYIGTIFQIVDDIIDIFSASEQSGKTRGTDLREGVFTLPVLFA 260
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + S +++++A ++ + + KA D L L
Sbjct: 261 LKDESPAGEELRGLLAG-PLTSDDDVERALALIEQTSGREQALEVVQQFTDKAFDELSTL 319
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD + +L + ++ + R+
Sbjct: 320 PDGPVRSALRSLTEYSISRV 339
>gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium
BAC13K9BAC]
Length = 319
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/321 (33%), Positives = 172/321 (53%), Gaps = 6/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + D+EK+N + K +DV +I ++ ++I SGGKR+RP++ + + +
Sbjct: 4 LKQISKSLHSDLEKLNIFLKKATSTDVSLINNLSSHMIESGGKRIRPIILMLFSRLF-KN 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N + +E IH ATLLHDDVVD S +R A +WG+ ++VLVGDFL S+AF +
Sbjct: 63 EKNVIEAGAILELIHAATLLHDDVVDQSDIRHNIKTANKLWGDDSAVLVGDFLYSRAFEL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ ++ + L+ +++GE+ QL + + + YL++I KT LF A+ V+
Sbjct: 123 IVDINKEKVYKILAETTNQISQGEVIQLMVKDKIIDNTDKYLNIIYLKTGKLFEASAAVA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S + KS+G N GIA+QL +D LDY G+ +E GKNI ED GK TLP+I
Sbjct: 183 SE--LAGGNYIDNAKSFGKNFGIAYQLRNDYLDYFGDESETGKNIIEDLSEGKSTLPLIH 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ +K +S N+ I + N + V T + Y A +SL
Sbjct: 241 SYLNSNSDDKKILLEIFEGKILSKSNV--LLEIFKRNNSDVYTRNKIKEYSDSAIESLDG 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L K+SL+++ FC QR+
Sbjct: 299 L-SGESKQSLVDLTHFCSQRI 318
>gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4]
gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4]
Length = 344
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 4/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L +++V L++ R+ S + + +V +L+ +GGKR RP++TL + E
Sbjct: 23 DLAAALRGRLDEVEKLLVSRLESGEDFLSEVALHLVTAGGKRFRPIVTLLAGEIGPEPDH 82
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-- 119
+ V A E IH ATL HDDV+D++++RRG +A W N T++L GDFL + +
Sbjct: 83 ERLVKAAVVCEMIHLATLYHDDVMDEASMRRGVESANSRWDNSTAILAGDFLFAHSSMLL 142
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + + T E + + + YL VI KT L +AA +
Sbjct: 143 ADLGPAAVQLIAQTFAELVTGQMRETVGPGVGGRDEDAAQHYLRVIWEKTGSLIAAAAQF 202
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+G L+ +G +GIAFQ+ DD++D E GK G D R G TLP+I
Sbjct: 203 GGEYSGATGEQIARLRRFGDAVGIAFQIADDIIDIASPSAESGKTPGTDLREGVHTLPMI 262
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + G+ + +A ++R + + Y A L
Sbjct: 263 YAMEAGSPDSPRLRDLL-AQPLTDDAEVAEALELLRVSDGMRRARATLEKYVDDAMAELD 321
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP ++L +V F + R+
Sbjct: 322 ALPAGPANEALRRLVRFTVDRV 343
>gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana]
gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 417
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/327 (28%), Positives = 173/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
++ L ++ D++++N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 95 LETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAEL 154
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L+ H L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+
Sbjct: 155 AGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMF 214
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+QA + ++ E ++ +S V A GE++Q S + DV +DY+ KTA L +
Sbjct: 215 AQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 274
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G
Sbjct: 275 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 334
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A + + + G L++A I+R + + A + A
Sbjct: 335 TAPVIFALENEPRLREIIESEFCEPGS-----LEEAIEIVRNRGGIKKAQELAKEKAELA 389
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP S ++ +L ++V F L+R+
Sbjct: 390 LKNLNCLPRSGFRSALEDMVMFNLERI 416
>gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana]
Length = 379
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/327 (28%), Positives = 173/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
++ L ++ D++++N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 57 LETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAEL 116
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L+ H L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+
Sbjct: 117 AGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMF 176
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+QA + ++ E ++ +S V A GE++Q S + DV +DY+ KTA L +
Sbjct: 177 AQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 236
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G
Sbjct: 237 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 296
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A + + + G L++A I+R + + A + A
Sbjct: 297 TAPVIFALENEPRLREIIESEFCEPGS-----LEEAIEIVRNRGGIKKAQELAKEKAELA 351
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP S ++ +L ++V F L+R+
Sbjct: 352 LKNLNCLPRSGFRSALEDMVMFNLERI 378
>gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
Length = 324
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 169/322 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++E + + + ++ V +Y++ GK++RP + L +A +
Sbjct: 3 INEVTASVADELEIFRKKYRELLHAQNTLVDKVTRYVLRQQGKQIRPAMVLLSAAVSGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 TDATYRAAIMVELLHSATLIHDDVVDGAEMRRGLPSINAIWKNKISVLIGDYLLSRGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L +S ++EGE+ Q+ +++LD+TEEDYL VI KTA L +++ +
Sbjct: 123 SLDSGDYGFLHQVSDAVRRMSEGEILQIQKTRSLDITEEDYLSVISDKTASLIASSCAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A A+K YG +LG+AFQ+ DD+LDY G+ + GK +G D R+ K TLP+I
Sbjct: 183 ALSATSDEKSILAMKRYGEHLGLAFQIRDDLLDYTGDSKKTGKEMGIDIRDKKITLPLIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E +S + + + ++ L A + +++ +L+
Sbjct: 243 ALSNAAPSEARRIRSILKNSGKRALKRGEVIEFVKRMDGLTYAAGVAERFADESRAALQP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P+ K +LM +VDF + R +
Sbjct: 303 FPEGKAKMALMNLVDFVMNRQH 324
>gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9313]
gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9313]
Length = 323
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 8/305 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHT 76
I + ++ ++L +GGKRLRP + L + L GD H LA E IHT
Sbjct: 23 RSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHT 82
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDDVVD++A RRG + ++ +VL GDFL +QA + + ++ LS V
Sbjct: 83 ASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRV 142
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
LA+GE++Q + + YL KTA L + +++ + +++G ++ L
Sbjct: 143 IMDLADGEVKQGLYRYDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKLLHH 202
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G LG+AFQ+VDD+LD+ G ++GK D +G T P + A E
Sbjct: 203 FGRQLGLAFQVVDDILDFTGSEQQLGKPAASDLASGYLTAPALYAL-----EEHLALARL 257
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
I ++L +A ++R ++A+ + A + +++++++ LPDS +++LME+ DF
Sbjct: 258 IEREFSEEDDLDQALELVRNSQAISRSRQLAEDFARESREAIAWLPDSPCQRALMELPDF 317
Query: 317 CLQRL 321
L RL
Sbjct: 318 VLSRL 322
>gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
pseudomycoides DSM 12442]
gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock3-17]
gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock3-17]
gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
pseudomycoides DSM 12442]
Length = 320
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D++ + + K + S+ ++I D LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDIDVIEKELKKVVASEQQLIEDAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D +A A+E IH A+L+HDDV+D + LRR WG++ ++ GD+L +++
Sbjct: 63 LDAIKHVAVALELIHMASLVHDDVIDAALLRRSSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ + + YL IK KTA+L +A+ ++
Sbjct: 123 ITNLEVPEAHQALSYTILEVCKGEIEQIKDKYDYNQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K K + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPKLRAKIVSVHENTTASEMKEIIHDIKTSPAIDRAFAFSERYLHKALEVIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
NBRC 100599]
gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
NBRC 100599]
Length = 321
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 159/313 (50%), Gaps = 3/313 (0%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
KD++ + + K I + V + +L+ +GGKR+RP+ L Y +A
Sbjct: 11 KKDVQYIEDELEKAIDTPVRELYLSSTHLLKAGGKRIRPVFVLLGGKWGNYDVKKLKHVA 70
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH A+L+HDDV+DD+ RRGK R+ W N+ ++ GD++ ++A + + +
Sbjct: 71 VPLELIHMASLVHDDVIDDADKRRGKDTVRMKWDNKVAMYAGDYIFARALAIASQLPIPQ 130
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ LS + +GE++Q+ N D YL IK KTA+L + + ++ ++ +G
Sbjct: 131 LHQILSNAIVEVCKGEIQQVKDLNNWDQNFRTYLRRIKRKTALLIAISCQLGAVASGASA 190
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + + YG N+G+AFQ+ DD+LD+ G ++GK G D +G TLP + + G R
Sbjct: 191 DMIRKMYWYGYNVGMAFQITDDILDFTGTEKQLGKPAGSDLVHGNITLPALYSAHHGKAR 250
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ ++ +A ++RE+ + ++ A Y +A L LP++ K
Sbjct: 251 AQFQEWIA---KNTFWDHTDEAVRMVREDEGIAFSQRLAERYIARAHAILADLPNNQAKT 307
Query: 309 SLMEVVDFCLQRL 321
SL + ++ + R
Sbjct: 308 SLTGIANYIIDRK 320
>gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
Length = 344
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + V L+ + + SD+E +L+ +GGKR RP+ L A + R
Sbjct: 27 SALAESVRQGIADVEALLHESVRSDLEFATRTSLHLVDAGGKRFRPLFALLAAQFGDPRT 86
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A +E +H ATL HDDV+D++ +RRG +A W N ++L GDFL +QA +V
Sbjct: 87 ENVIKSAAVVEMVHLATLYHDDVMDEATMRRGATSANARWDNSVAILTGDFLFAQASRLV 146
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + A E L G++R+ + + YL VI KT L + A +
Sbjct: 147 ADLGTDAAREMARTFEA-LVTGQMRETVGVGRDEDPVDFYLKVIYEKTGSLIAIAGRFGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G A++ G LG AFQ+ DDV+D E GK G D R G TLP++ A
Sbjct: 206 LFSGASPEQVTAMERLGRILGTAFQISDDVIDIASPAVESGKTPGTDLREGVRTLPMLFA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++++A ++RE L Y +A+ L L
Sbjct: 266 --LADEGTDVRLRELLAGPLEHDADVEEALKLLRECDGLTRARRTLDEYAAEARTELAAL 323
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD + +L +V++ + R
Sbjct: 324 PDVPARDALATLVEYVVART 343
>gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
Length = 324
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+++++ K++ + L + S ++ +V+ Y+ GK +RP+L L A +
Sbjct: 4 LEVIKKPIEKELSEFKALFDASLKSSTPLLDEVLGYIKQRNGKMMRPILVLLMAKLYGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ +
Sbjct: 64 NDSTLHAALSLELLHTASLVHDDVVDESNKRRGQSSVNALYDNKVSVLVGDYMLATSLRH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T E + ++ + L+EGE+ QL N D +EE Y VI+ KTA LF+A+ E
Sbjct: 124 ASYTNHIELVGLVARLGQDLSEGEIIQLVNISNRDFSEEIYFDVIRKKTAALFTASAESG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ + +G +GIAFQ+ DD+ DY +GK G D GK TLP +
Sbjct: 184 AISVNAPKDEVEKAVLFGEMIGIAFQIKDDIFDYFDNEE-LGKPTGNDMMEGKLTLPALH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
EK I S E + +++ + E Y Y KA L
Sbjct: 243 VLNTCANEEKKELALRIRSLSASKEEIASFVDYVKQEGGITYAEQVMYDYRNKALALLPE 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
D + + +L +D+ ++R
Sbjct: 303 AADEAVRTALTAYIDYVIKR 322
>gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 325
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 103/324 (31%), Positives = 166/324 (51%), Gaps = 5/324 (1%)
Query: 1 MK-MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
MK + D+ +D+ + + + SD ++ D+ +L+ SGGKRLRP L L A
Sbjct: 1 MKNDMFDVIEEDLTVLETALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARGGTA 60
Query: 60 -RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF
Sbjct: 61 FDRDRAMPIAVALELIHTASLVHDDVIDEADTRRGAATTNAKWGNQVAILSGDYIFARAF 120
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ S L+ + CTL+EGE+ Q + V+E+ Y I+ KTA
Sbjct: 121 KQVARVGYSWHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERIRKKTADFLEICC 180
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
E+ + I G+ YG +G+AFQ+ DD+LD + +GK G D G TLP
Sbjct: 181 ELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQTAERIGKPAGRDLAQGYVTLP 240
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VI A ++E+ + I + K+S E + +A ++R + + RA Y +AK +
Sbjct: 241 VIRALSVLGEKERAELTALITNPKMSEEEVARALNLVRSTDGVDYAQERADDYLTRAKAA 300
Query: 298 L-RCLPDSSWKKSLMEVVDFCLQR 320
L L D +++ + DF +R
Sbjct: 301 LPASL-DPRIRETCLMAADFIGRR 323
>gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 324
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 168/320 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + ++E + ++ V +Y++ GK++RP + L A +
Sbjct: 3 IKDVVASVAGEIEIFQQRYKVVLQGQNTLVDKVTRYVLKQQGKQIRPAMVLLAAQLCGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+
Sbjct: 63 NESSYRAAIMVELLHSATLIHDDVVDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLY 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+E K L +S ++EGE+ Q+ +++LD++E DYL VI KTA L S+A +
Sbjct: 123 SLEYKDYGFLHMVSEAVRRMSEGEIFQIQKTRSLDISEADYLSVIADKTASLISSACAMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A ALKSYG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I
Sbjct: 183 AMSATTDEVRIAALKSYGEYLGLAFQIRDDLLDYTGDSKKTGKQMGIDIKDKKITLPLIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ +S + + + + LV A + KA S+
Sbjct: 243 ALLHAPVAEQKMIRSILKSSRKRAVKSGEVIAFVTGKGGLVYAAEVAEGFAAKAVASISS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S+ K SL+ +VDF ++R
Sbjct: 303 FPESAAKTSLLRLVDFVMKR 322
>gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Florida]
gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Puerto Rico]
gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Florida]
Length = 327
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 122/320 (38%), Positives = 185/320 (57%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L L+D++ + LI+ SD+ I D+V +L+ SGGKR+RP+L LA ML
Sbjct: 9 LIDLKSLVLEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPILLLAVCKMLALA 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF
Sbjct: 69 DERRIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E +
Sbjct: 129 IVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+
Sbjct: 189 GVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIM 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++ K + + +++ A + + A Y A L
Sbjct: 249 AYEEADSAGKEMLRGALAGRT---ADIETAHSYITSLNIVQKATKFAAEYVDAANRFLEP 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S K L +++ LQR
Sbjct: 306 FPNSQCKSKLSALLNSALQR 325
>gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 305
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANCDTVSRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPILCKK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +K+ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 IRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKPLPRGQAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128]
Length = 336
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLVAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++A+RRG +A + W N +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAAVRRGVASANVRWDNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVHVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLAEDVALSELLDSDLSDDARHAEALRLLRAHPALEHARRDTVRYAKEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+E+ D + R
Sbjct: 313 APLRECEAKAALVELCDAVVHR 334
>gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
Boryong]
gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
Boryong]
Length = 338
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 118/325 (36%), Positives = 193/325 (59%), Gaps = 4/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L + KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y
Sbjct: 13 IDKLSNFLDKDMSEVNNVILNCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNY 72
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G +H LA A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F
Sbjct: 73 HGLSHYYLAAAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFK 132
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++I++ S AL++ SL T+ GE++QL+ +TE++Y VI++KTA LF + E
Sbjct: 133 LMIKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCE 192
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++I+ +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+
Sbjct: 193 IAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKVTLPI 252
Query: 239 ILAFQRGTKRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I+A+ + + ++FW + + ++ K A ++ + L + + Q+ D
Sbjct: 253 IMAYNCASSQNERDFWHRIFLNREQKEDDFKHALSLLYTHNVLALIKQKISQLEQQVYDI 312
Query: 298 LRCLPDS-SWKKSLMEVVDFCLQRL 321
+ L S +K L + + + R+
Sbjct: 313 ITKLNISLEYKNYLENLTKYIINRI 337
>gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces hygroscopicus ATCC 53653]
gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces himastatinicus ATCC 53653]
Length = 335
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 140/322 (43%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE T + V +L+ SDV I + ++L+ +GGKR RP+L L A +
Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSDVPFITEAAQHLVRAGGKRFRPLLVLLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVSSANARWGNSVAVLTGDFLFARASHVL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + L + E YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQAEAFERLVTGQILETAGPRGRDPI--EHYLDVLAGKTGSLIAVSGRFGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G S+ L YG LG+AFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 192 MMSGADESIVNILTQYGERLGMAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLHL 251
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + +R + AL Y +A+ L
Sbjct: 252 RAQAEATGAPEDRELCELLAGDLTDDARHAEVLRRLRAHPALEQARQDTLRYAAEARSML 311
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ K +L + D R
Sbjct: 312 APLPEGPAKSALEGLCDAVAHR 333
>gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
Length = 322
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 108/321 (33%), Positives = 161/321 (50%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++ +N + + ++ DV K+++ SGGKR+RP+ TL A L Y
Sbjct: 1 MDELLRYFQRELPGINDFLDREADQLNGLVRDVAKHILGSGGKRIRPLFTLLFARALGYA 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+++ +ACA+E +H+ATLLHDD +DD+ LRRG+ A+ LV+G ++L GD LL+ A M
Sbjct: 61 KDDYLAIACALELLHSATLLHDDYLDDAELRRGRAASHLVFGRTETILAGDALLALANEM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ A GE+ ++ S+ + E Y+ +I KTA L A
Sbjct: 121 GARYGNPRLSWLLAKGIMETATGEIEEIEFSRAPSLNRETYMRIIVGKTARLIECACRCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +AG A +G+N+GIAFQLVDD LDY +E GK G D + GK TLP+IL
Sbjct: 181 AALAGATPEQEDAAGEFGLNVGIAFQLVDDALDYASPTSETGKPEGGDLKEGKVTLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ G + + DG +S + +RE T A Y +KAK L
Sbjct: 241 LMEEGDEAGAEVLLEALRDGSLSEAQSRDVLEQVREGGYSEKTREEAARYIEKAKACLDG 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L + DF L R
Sbjct: 301 YEPGGELTVLKQAADFVLTRT 321
>gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 98/327 (29%), Positives = 166/327 (50%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L + D+ +N + K + +D M+ K + +GGKR+RP L +
Sbjct: 22 LADLVNPVSDDLRLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQL 81
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ H LA E IHTA+L+HDDV+D+S RRGK +G + +VL GDF+
Sbjct: 82 SNIQELRPQHRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFMF 141
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A GE++Q + +VT ++YL KTA L +
Sbjct: 142 AQSSWYLANLDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNYLDKSYYKTASLIA 201
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ + +++ + SV A+ YGM+LG+AFQ+VDD+LD+ ++GK G D G
Sbjct: 202 SSTKSAAIFSDSTPSVSNAMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDLSKGNL 261
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PV+ A ++ + + I+ +L+ A ++ + A G A
Sbjct: 262 TAPVLFALEKEPEL-----RDLIDTEFTEEGSLEAAIALVHRGGGIDRARTLAKEQGDLA 316
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
K SL CLP ++SL +VD+ L+R+
Sbjct: 317 KKSLECLPQGDTRRSLERMVDYVLERI 343
>gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
Length = 327
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 9/327 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L + V+ I++ + + + + ++L GGKRLRP L L L
Sbjct: 1 METLTRYLSEFRPLVDKKIMEVLEGSPKELYEAARHLPSKGGKRLRPALVLLVNKALGGE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ + A A+E +H TL+HDD++D LRRG +++G ++L GD L ++A+
Sbjct: 61 VEGALPAAAAVELLHNFTLVHDDIMDRDELRRGVPTVHVLYGESMAILAGDLLYAKAYEA 120
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+E E L+ A T+AEG+ + K DVTEE+YL +I+ KT LF A
Sbjct: 121 LLQSPQPPDLVKEMTEVLTWSAVTVAEGQAMDMEFEKRWDVTEEEYLEMIEKKTGALFGA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +L A + + +G+ LG AFQ+ DDVL G+ GK D R GK T
Sbjct: 181 SAALGALTANKREVKDLMKE-FGLILGKAFQIKDDVLSLLGDEKVTGKPKYNDLREGKKT 239
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ VI A + R++ ++ + S E L++ +++ + AL A + ++A
Sbjct: 240 ILVIYALRNL-PRDEAERVKSVLGRETSYEALEEVAELIKRSGALDYAMKLAEEFEKRAY 298
Query: 296 DSLR--CLPDSSWKKSLMEVVDFCLQR 320
+ L D ++L E+VDF ++R
Sbjct: 299 EILETVRFEDEEAMRALKELVDFAVKR 325
>gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
9202]
gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
9202]
Length = 323
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + + +VL GDFL +QA
Sbjct: 66 LTSKHKRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ + + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSEINDENLTSLYEFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E IN +L A I+ ++A+ + A + +K+++
Sbjct: 246 YAL-----EENKQLSVLINRELAEKNDLDDALNIIMNSKAIDSSRKLAEDFAMLSKEAIV 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 301 WLPDSEYKRALMALPEFVLSRI 322
>gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9635]
gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9635]
Length = 319
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDD 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA D +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALDLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
Length = 334
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 189/321 (58%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y GD
Sbjct: 13 KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+H+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 73 SHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++EGE+ QL + + I LF A+ V +
Sbjct: 133 ASGSIKAMNVLAKASAIISEGEVVQLVKLNERRLINIEEYQQIVKSKTAELFGASCSVGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 193 IIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + K +K K+ I + E + +M +++ D S +A L +
Sbjct: 253 YDKLEKDDKAHLKNMIKSDNRTKEEFVQICDLMVKHKISKDIINHLNSLENEAISLLNKI 312
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K+ L ++ F L R
Sbjct: 313 PVQNIYKEYLFSIIRFILDRS 333
>gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase
[Methanosarcina barkeri str. Fusaro]
gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosarcina barkeri str. Fusaro]
Length = 321
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 12/324 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D K V+ I + + + +YL+ +GGKRLRP + + A
Sbjct: 2 TLVDEIKKRSVHVDAAIDELLPVAHPEELYKASRYLVDAGGKRLRPAVLILAAEATGSDL 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A A+E +H TL+HDD++D +RRG A +WG+ ++L GD L S+AF ++
Sbjct: 62 KSVLPAAVAVELVHNFTLIHDDIMDKDDIRRGMPAVHTIWGDAGAILAGDTLYSKAFEIL 121
Query: 122 IETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +++ ++ +S + EG+ + K V++ +Y+ +++ KT+VL++AA
Sbjct: 122 SKVQNEPARILKCMDVISKTCTEICEGQWLDMDFEKREKVSKAEYIEMVEKKTSVLYAAA 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ +L+ G + + AL YG +GI FQ+ DDVLD +GK G D GK TL
Sbjct: 182 AKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLDMVTPEEVLGKVRGSDLMEGKHTL 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
VI AF++G K G+ + E +A I+ E ++ + A SY + K
Sbjct: 242 IVIDAFEKGVKL------DIFGKGEATQEETDEAVRILTECGSIDYVKDLAISYINEGKA 295
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
L L D K+ L+++ D+ + R
Sbjct: 296 KLDVLRDCPEKELLLQIADYMISR 319
>gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39]
Length = 323
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 168/321 (52%), Gaps = 8/321 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D++ + + + + + ++ ++L GKR+RP + L + +
Sbjct: 7 LFSTVEADLKLLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S LRRG ++ N+ +VL GDFL +Q+
Sbjct: 67 IPKHRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LAEGE++Q + ++ E YL KTA L + + + +
Sbjct: 127 LANLDNLEVVKLLSQVIMDLAEGEIQQGLNRFDTSLSIEAYLEKSYYKTASLIANSSKAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L++GV + + L YG N+G+AFQ+VDD+LD+ G +GK D ++G T P +
Sbjct: 187 GLLSGVSAELAEDLYKYGRNIGLAFQIVDDILDFTGSTESLGKPAASDLKSGNLTAPTLF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A EK F ++ I+ +L++A +++E+ + + A + Q A + +
Sbjct: 247 AL-----AEKPFLETLIDREFAQDGDLEQAIALIQESSGIDKSRELAIHHAQVAVEHINQ 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S +++L+E+ D+ + R+
Sbjct: 302 LPPSESRQALVELGDYVVSRI 322
>gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Mississippi]
gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Virginia]
Length = 327
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 3/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L L+D++ + LI+ SD+ I D+V +L+ SGGKR+RP+L LA ML
Sbjct: 9 LIDLKSLVLEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPILLLAVCKMLALA 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF
Sbjct: 69 DERRIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E +
Sbjct: 129 IVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+
Sbjct: 189 GVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIM 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++ K + + +++ A + + A Y A L
Sbjct: 249 AYEEADSAGKEMLRGALAGRT---ADIETAHSYITSLNIVQKATKFAAEYVDAANRFLEP 305
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S K L ++ LQR
Sbjct: 306 FPNSQCKSKLSALLHSALQR 325
>gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
Length = 320
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + K++ V+ +++ I S I + L+ +GGKR+RP L + +
Sbjct: 3 LHSIYRDVTKEVSLVDQFLIRHIASSDPTIDAAGQQLLQAGGKRIRPAFVLLASKFGQAD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D V +A ++E +H A+L+HDDV+DD+ LRRGK + + ++ G+FL +A +
Sbjct: 63 RDELVRVAASLELVHMASLVHDDVIDDAELRRGKPTVMQHFDEEVALYSGNFLFGEAVKL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E E ++ + + EGE+ Q+ + + + + Y+ I+ KTA+L A+ +
Sbjct: 123 IGEVGKPELVQVMVHAMREICEGEIEQIYDQYDWEQSIKRYIKRIERKTAILIEASCHLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A +AL+ +G ++G+AFQ+ DD+LD+ + E+GK + ED R+G TLP
Sbjct: 183 AIVANCSPEDTKALRQFGRDIGLAFQIADDLLDFTAKRTELGKPVAEDLRHGHKTLP--- 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + F + S E + ++ + AL T+ Y ++A L
Sbjct: 240 -VFYASEDREFFRELQKIRSMPSHEEVAPLLDRLQRSDALERTQQTVDLYIRRAILRLNH 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP SS K+SL EV + +R
Sbjct: 299 LPKSSAKRSLEEVARYVGKRK 319
>gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
HF10-11H7]
Length = 323
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA
Sbjct: 66 LTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E IN ++L+ A I+ ++A+ + A + +K+++
Sbjct: 246 YAL-----EENKQLSVLINRELAEKDDLEDALNIIMNSKAIESSRKLAEDFAMLSKEAIV 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 301 WLPDSEYKRALMALPEFVLGRI 322
>gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis
str. Marburg]
gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported]
- Methanobacterium thermoautotrophicum
gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus]
gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
Length = 325
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 100/327 (30%), Positives = 170/327 (51%), Gaps = 7/327 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M + D+ K E + I++ I + + ++LI +GGK++RP L L + +
Sbjct: 1 MTEVLDILRKYSEVADKRIMECISDITPDTLLKASEHLITAGGKKIRPSLALLSCEAVGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ +A AIE IHT +L+HDD++DD +RRG+ + ++WG ++L GD L S+AF
Sbjct: 61 NPEDAAGVAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFE 120
Query: 120 MVIETKSQEALEA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
VI E ++ + + EG+ + + LDVTE++Y+ +I KTA L +A
Sbjct: 121 AVIRNGDSERVKDALAVVVDSCVKICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++ G +AL+ YG +G+AFQ+ DD LD + +GK +G D GK T
Sbjct: 181 ATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMT 240
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L V+ A + ++ ++ S + G ++ +A I A A Y + AK
Sbjct: 241 LMVVKALEEASEEDRERLISILGSG--DEGSVAEAIEIFERYGATQYAHEVALDYVRMAK 298
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L L DS + +LM + DF L+R +
Sbjct: 299 ERLEILEDSDARDALMRIADFVLEREH 325
>gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-42]
gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
95/8201]
gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST26]
gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
6E1]
gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
6E1]
gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST26]
gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
95/8201]
gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-42]
gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 305
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPILCKK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +K+ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 IRSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKPLPRGQAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma
proteobacterium HTCC2080]
gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma
proteobacterium HTCC2080]
Length = 321
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 118/320 (36%), Positives = 186/320 (58%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + ++VN LI++++ SDV M+ +V Y++ +GGKRLRP+L L A
Sbjct: 2 ITSIRACVADEFQQVNELIIEQLKSDVAMVENVGHYIVDAGGKRLRPLLALLAASAQGGV 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A +EFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDF+ ++AF +
Sbjct: 62 DLSDIKFAAVVEFIHTATLLHDDVVDLSSLRRGRATANAEFGNAPSVLVGDFIYTRAFQL 121
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++ L++++ T+A GE+ QL + + VTE YL VI KTA LF+AA S
Sbjct: 122 MVKLGDLSLLQSMADTTNTIAAGEVLQLMRAGDPSVTESQYLDVIDRKTAALFAAACRGS 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + ++ + +YG +LGIAFQ++DDVLDY G+ GK +G+D GKPTLP+I
Sbjct: 182 AILKGRDTTQQEQMAAYGRHLGIAFQMIDDVLDYTGDPQVTGKQVGDDLNEGKPTLPLIH 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
G+ + + ++ ENL +R + + T +A + Q A +L+
Sbjct: 242 TMASGSADDAAIVRDALSQKNS--ENLTGVIAAVRRSGGIDYTREQAVLHQQSALAALKG 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L S ++L E+ D + R
Sbjct: 300 LDRSPALEALHELADMAINR 319
>gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9215]
gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9215]
Length = 323
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 162/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L D++ + + I + ++ ++L +GGKRLRP + L + +
Sbjct: 6 ELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFC 65
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + + +VL GDFL +QA
Sbjct: 66 LTSKHKRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LAEGE++Q + + Y++ KTA L + + +
Sbjct: 126 HLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFSKYINKSYCKTASLIANSCKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+
Sbjct: 186 AGVLSGINDENLTSLYEFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E IN +L A I+ ++A+ + A + +K+++
Sbjct: 246 YAL-----EENKQLSVLINRELAEKNDLDDALNIIMNSKAIDSSRKLAEDFAMLSKEAIV 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPDS +K++LM + +F L R+
Sbjct: 301 WLPDSEYKRALMALPEFVLSRI 322
>gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 336
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE T + V +L+ SDV I ++L+ +GGKR RP+L L A +
Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSDVPFITGAAQHLMRAGGKRFRPLLVLLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVASANARWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G++ + + ++ E YL V++ KT L + + +
Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGQDPIEHYLDVLQGKTGSLVAVSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G SV L YG LGIAFQL DDVLD + +E GK G D R G TLPV+
Sbjct: 193 MMSGADESVVSILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLHL 252
Query: 242 FQRGTKREKNFWKSTIN--DGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + G +S + L + +R + AL Y ++A+ L
Sbjct: 253 RAQAEASGSAEDRELCELLTGDLSDDGLHSEVLRRLRAHPALEQARQDTLRYAEEARAML 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP+ + K +L + D + R
Sbjct: 313 APLPEGAAKAALEGLCDAVVHR 334
>gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH676]
gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-15]
gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-Cer4]
gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST24]
gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1550]
gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1550]
gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST24]
gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-Cer4]
gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-15]
gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH676]
gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 305
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E I
Sbjct: 2 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 61
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS
Sbjct: 62 HMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALS 121
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L
Sbjct: 122 HTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG +G+++Q++DD+LD+ ++GK G D G TLP + + K
Sbjct: 182 FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPAL----YAMEDPVLRQK 237
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
T + +++ ++ + A+ + Y KA + ++ LP K +L V
Sbjct: 238 ITSVHENSTASEMQEIIDAVKNSTAIDQAFAFSERYLHKALEIIKPLPRGKAKYALQNVA 297
Query: 315 DFCLQRL 321
+ +R
Sbjct: 298 KYIGKRK 304
>gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
Length = 311
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 167/312 (53%), Gaps = 4/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLAC 69
ME + + S V ++ + Y++ GK++RPM A M+ + A
Sbjct: 1 MELFEKKFFQSMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSDGKVNERTYRGAS 60
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ +
Sbjct: 61 VIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDL 120
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + +
Sbjct: 121 LKIISVAVREMSEGELLQIEKARRLDITEEVYYDIIRQKTATLIAACCSLGAASVKPDSG 180
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ ++ +G +G+AFQ+ DD+ DY ++GK G D + K TLP+I A K+E
Sbjct: 181 DVENMRRFGELIGMAFQIKDDLFDY--GEEKIGKPTGIDIKEQKMTLPLIYALNHSDKKE 238
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K + +++ + + +K+ +++ L + + Q+A L P+S +K+S
Sbjct: 239 KAWIINSVKNHNKDKKRVKEVIAFVKDKGGLEYASSQMILFQQEALKILDEYPESRYKES 298
Query: 310 LMEVVDFCLQRL 321
L +V++ ++R
Sbjct: 299 LELMVNYVIERK 310
>gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
Length = 323
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SFFSPVEDDLRLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDRE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ALRR ++ N+ +VL GDFL +Q+
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE+ Q + +T + YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDTTLTLDAYLDKSYYKTASLIANSAKS 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++++ V +L +YG LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AAILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTSPTEVLGKPAGSDLVSGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E + K+ I E+++KA I+ E++ + A + Q A L
Sbjct: 246 FAI-----EETPYLKTLIEREFSEEEDIEKALSIINESQGIARARELASYHAQLALKQLD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CL S + +SL ++VD+ L RL
Sbjct: 301 CLKSSQYSQSLTDLVDYVLSRL 322
>gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
glomerata]
gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
glomerata]
Length = 333
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + + V ++ + SDV + + ++L+ +GGKR RPM+ L A +
Sbjct: 16 DLEQAVRRGLYGVERMLRDAVRSDVPFVTETSRHLVDAGGKRFRPMVVLLAAHFGDPEAI 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A AIE H +TL HDDV+D++ LRRG +A + W N ++L GDFL ++A +
Sbjct: 76 GVLPAAVAIELTHLSTLYHDDVMDEAPLRRGAASANVRWTNTIAILTGDFLFARASDITA 135
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + TL EG++R+ S E YL VI+ KTA L + + + ++
Sbjct: 136 DLGPEATRILART-IATLCEGQIRETVGSLPGQDPVEHYLRVIREKTASLIATSGRLGAM 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG AL ++G G+AFQL DD++D + GK G D R G PTLPV+ A
Sbjct: 195 LAGADLITVDALAAFGDYFGVAFQLSDDLIDVASDQAASGKTPGTDLREGIPTLPVLYAL 254
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ +S + DG L +A ++R + A+ + +A+D L L
Sbjct: 255 EDDD-AAAARLRSLMKDGFAVEGALAEALDLLRGHPAMGRARREVARWAGQARDCLAVLE 313
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ +L + D+ + R
Sbjct: 314 KGPARTALEALADYVIDRT 332
>gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-44]
gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-44]
Length = 320
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ D+ + + K + S+ ++I D LI +GGKR+RP+ L +Y+
Sbjct: 3 LQLMYSFLRSDINVIEKELKKVVASEQQLIEDAALQLIEAGGKRIRPVFVLLAGKFGDYK 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A A+E IH A+L+HDDV+D + LRR WG++ ++ GD+L +++
Sbjct: 63 LETIKHVAVALELIHMASLVHDDVIDAALLRRNSATVNAKWGDRIAMYTGDYLFAKSLEC 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + EA +ALS + +GE+ Q+ N + YL IK KTA+L +A+ ++
Sbjct: 123 ITNLEVPEAHQALSYTILEVCKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G L YG +G+++Q++DD+LD+ ++GK G D G TLP +
Sbjct: 183 AIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPAL- 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K K + +K+ ++ + A+ + Y KA + ++
Sbjct: 242 ---YAMEDPKLREKIVSVHENTTASEMKEIIHDIKTSPAIDQAFAFSERYLHKALEVIKP 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K +L V + +R
Sbjct: 299 LPRGQAKYALQNVAKYIGKRK 319
>gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 366
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 7/320 (2%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L + +V + + + S + +IP V +L F+GGKR RPM TL A Y D
Sbjct: 49 ALVADGLVEVETRLGELLHSRLAIIPKVGGHLTFAGGKRFRPMATLLAAQAAGYTCDEAW 108
Query: 66 L----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+A A E +HTATLLHDDV+D+ RRG+ AARL +GN SVL GD+ ++A V
Sbjct: 109 NDTLTIAAAGELLHTATLLHDDVIDEGEFRRGRPAARLPYGNGLSVLTGDYCFARALQSV 168
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
A +++ +AEGE+ QL + +V E Y VI+ KTA ++
Sbjct: 169 SRLGKAAATSSMADAVTLMAEGEIAQLYAAGEWEVDLERYTLVIERKTAA---LIAWCTA 225
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ V+ AL YG +G AFQ+ DD++DY +V GK G+D R GK TLP+ILA
Sbjct: 226 VAHLVEPDAAAALARYGREVGFAFQIADDIIDYTLDVETSGKARGQDLREGKVTLPLILA 285
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R + + ++ L + + + + L + ++ + A ++L+ L
Sbjct: 286 CEREPELRARLAELLRAGPPVAEAELDRLLVAVVDAGGLDAAREQGQAHVEAACEALQAL 345
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P S +++L E+ + + R
Sbjct: 346 PPSPAREALGELARYIVGRT 365
>gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 164/301 (54%), Gaps = 4/301 (1%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLL 80
+ S V ++ + Y++ GK++RPM A M+ + A IE IHTATL+
Sbjct: 1 MSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSNGEVKERTYRGASVIELIHTATLV 60
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDVVDDS RRG + +W N+ +VL+GD+LLS+ + I+ + + L+ +S+ +
Sbjct: 61 HDDVVDDSNKRRGFFSINALWKNKIAVLIGDYLLSKGLLLSIDNEDFDLLKIISVAVREM 120
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
+EGEL Q+ ++ LD+TE Y +I+ KTA L +A + + + ++ +G
Sbjct: 121 SEGELLQIEKARKLDITETIYYEIIRQKTATLIAACCSLGAASVKPNTLEVETMRKFGEL 180
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ+ DD+ DY +GK +G D + K TLP+I +K++K + ++I +
Sbjct: 181 IGMAFQIKDDLFDY--GSKSIGKPVGIDIKEQKMTLPLIYVLNNSSKQDKRWLINSIKNH 238
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + + +++N L + ++ +A D L+ P+S ++ SL +V++ ++R
Sbjct: 239 NKDKKRVDQVITFVKDNGGLDYAVKKMKAFQNEALDILKNFPESEYRASLELMVNYVIER 298
Query: 321 L 321
Sbjct: 299 K 299
>gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 338
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 5/323 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + +V L+ + + S+ + + ++L+ +GGKR RP++ L A +
Sbjct: 16 DLEKAVRVGLARVEDLLRESVRSESAFVTETSRHLVDAGGKRFRPIVVLLAAQFADPEAV 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A AIE H +TL HDDV+D++ RRG +A W N ++L GD+L ++A +
Sbjct: 76 GVVPAAVAIELTHLSTLYHDDVMDEAPRRRGAASANTRWTNTVAILTGDYLFARASDITA 135
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + TL EG++R+ E YL VI KTA L + + + ++
Sbjct: 136 DLGPEATRILART-IATLCEGQIRETVGPAPGQDPVEHYLRVITDKTASLIATSGRLGAM 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL-- 240
+AG L ++G G+AFQL DD++D + + GK G D R G PTLPV+
Sbjct: 195 LAGADPITVDTLATFGELFGVAFQLSDDIIDVASDPVDSGKTPGTDLREGIPTLPVLYAL 254
Query: 241 --AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + + + +A ++R + + S+ +A++ L
Sbjct: 255 QADDRAAGRLRELITTGFAPGDGNTEDRVGEALDLLRGHVGMARARAELISWSSRARECL 314
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LPD+ K +L + DF + R
Sbjct: 315 ASLPDNPAKTALESLADFVVDRT 337
>gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea]
gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase
gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea]
Length = 323
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L K++ V + + ++ K+L +GGKRLRP + L A +
Sbjct: 5 SSLFHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQQ 64
Query: 62 D---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LA E IHTA+L+HDDV+D+ + RRG+ ++ + +VL GDFL +Q+
Sbjct: 65 EIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSS 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + E ++ ++ V AEGE+RQ + + ++ +DY+ KTA L +A+
Sbjct: 125 WYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSFYKTASLVAASCR 184
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++ + + + L YG ++G+AFQ++DDVLD G +GK G DF NG T P+
Sbjct: 185 GAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPI 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A + K I ++ A +++++ + + A Q A L
Sbjct: 245 LFALTQEGKL-----DQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCL 299
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ LP S+ SL E+ F + RL+
Sbjct: 300 QFLPKSAPVSSLKELTHFIITRLS 323
>gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 331
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ D+ V I + + I ++ YL GGKRLRP L L A +Y + +
Sbjct: 18 EPIRNDLAAVEVAIRRALDGPDPHIVELATYLQRGGGKRLRPALVLLAARNFQYDRERLL 77
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDD+VD + RRG + WG T+VL GDFL ++AF ++
Sbjct: 78 PVAAAVELIHMATLVHDDIVDGATARRGLPTVNVRWGTGTAVLTGDFLFARAFSLLAADG 137
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
++ ++ ++ GE+ Q + + EE Y I KTA S + L+ G
Sbjct: 138 DNRVVQVMAEAVYEMSTGEIEQQAQLFDPSTGEEGYYRRIYKKTAHFISHCCLMGGLMGG 197
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+AL+ YG +G+ FQ++DD+LD G ++GK G D R+G TLPV+ A R
Sbjct: 198 ATEQQAEALRRYGYGIGMGFQVIDDILDLTGSPEQLGKPRGTDLRSGVLTLPVLFALARD 257
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ +++ + L RA + A ++L L +
Sbjct: 258 PQPWLLER---LEARQVDDATVERVTGWVEAVGGLEYARRRAEQFVGDALEALDELAGAP 314
Query: 306 WKKSLMEVVDFCLQRLN 322
+ +L + F L R +
Sbjct: 315 MEPNLRALARFILDRKH 331
>gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
Length = 328
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L++ + +V LI +RI D I + +L+ +GGKR RPMLT+ A + E D
Sbjct: 12 LQERLTDGLARVEALIEERIDHDDPFIAEANVHLLRAGGKRFRPMLTILAAELGEGVNDA 71
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E H A+L HDDV+D++ LRRG A +GN T++L+GD L A +V E
Sbjct: 72 VVTAAAAVELTHLASLYHDDVMDEADLRRGTPTANAAYGNSTAILIGDLLFGHASALVAE 131
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ D YL V++ KT VL + A ++
Sbjct: 132 LGAEAVRIQAETFIRLCTGQIRDDRQAPAGEDSGAY-YLRVLEDKTGVLIATAARYGAMF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ V + ++ YG LG+AFQL DD++D E+GK G D R GK TL V+ A
Sbjct: 191 AGCEDDVIETMRVYGERLGMAFQLADDLIDIESSAEELGKLPGMDLREGKRTLAVLHALA 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + + ++D E L +A ++R + ALV + G++A+D+L LPD
Sbjct: 251 STSPEDARLQELLLSDLSGDAE-LAEALTLLRAHPALVRARDETRAVGEQAQDALVGLPD 309
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S K +L+ + R +
Sbjct: 310 SEAKTALLALATSVTHRAS 328
>gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413]
gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413]
Length = 323
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 166/322 (51%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFTPVEADLRILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQD 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ ++L GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA GE++Q + ++ E+Y+ KTA L + + +
Sbjct: 126 YLANLDNLQVVKLLSEVIMDLATGEIQQGLNRFDASISIENYIEKSYYKTASLIANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L++ V + L +YG +LGIAFQ+VDD+LD+ + +GK G D ++G T PV+
Sbjct: 186 AGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTSTTDTLGKPAGSDLKSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + + I +L++A +++ ++ + A + + A + L
Sbjct: 246 FAL-----AEKPYLEVLIEREFAQEGDLEQALELIQNSQGIQKARDLAAHHTKLAIEHLT 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S ++L+ + ++ L RL
Sbjct: 301 TLPTSESHQALINIAEYTLSRL 322
>gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis SK135]
gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis SK135]
gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU144]
gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU045]
gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU028]
Length = 319
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 154/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
M L +++KV + + I S + + + +L+ SGGKR+RP + +
Sbjct: 1 MAKLN--INNEIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNN 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+
Sbjct: 59 KPSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E +S + GEL Q N + T +YL I KTA+L + +
Sbjct: 119 KHLSEISDTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQ 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV
Sbjct: 179 VGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPV 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K + K + + + I+R++ ++ ++ + Y KA + +
Sbjct: 239 LLEM---RKNKTFKDKISQLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L D K+ +++ R
Sbjct: 296 DELEDGPNKELFRKLIKKMGSR 317
>gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
Length = 316
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 120/314 (38%), Positives = 193/314 (61%), Gaps = 3/314 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L +++++ LI+K+ S+V++I D++++LI SGGKR RP++ LA ML ++
Sbjct: 4 LVASELQEMESLIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCTDARRIV 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A AIEF+H+ATLLHDDVVD S +RRG A +WGN+ S+LVGDFL + AF ++ S
Sbjct: 64 VAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIVSCNS 123
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L LS A + GE++QL S +LD++ YL +I SKTAVLFSAA E ++++ V
Sbjct: 124 IQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDV 183
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
R AL+ +G N GI FQ++DD+LDY NE+GK D +GK TLP+I+A++ +
Sbjct: 184 GTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGAS 243
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++++ + ++ + + AF + A+ + A Y A+ L PDS++
Sbjct: 244 EKDRIGLRGALSRERPDPDL---AFSYIMAQNAIEKSVGLAKEYIAIAEKQLSHFPDSAY 300
Query: 307 KKSLMEVVDFCLQR 320
K+ L+ +++ + R
Sbjct: 301 KQKLLNLLNSAVNR 314
>gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
Length = 327
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 6 KIQQDLKDEVTKLNDLIISCLKSDEELIETVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++EGE+ QL + D I LF A+ EV +
Sbjct: 126 ASGSIKAMNVLAKASAIISEGEVIQLVKLNERRIITIDEYQQIVKSKTAELFGASCEVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAEQVDHISKDMRDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + + K +M E+ +T + +A L +
Sbjct: 246 YNKLEQDKQLWLENIIKCDKRTNDEFIKVRELMIEHEIHNETVSYLSNLENEANKLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P +S+K L ++ F L R
Sbjct: 306 PVQNSYKDYLFSIIRFILDRS 326
>gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
ATCC 29083]
gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
ATCC 29083]
Length = 336
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE M V +L+ S+V I + ++L+ +GGKR RP+L + A +
Sbjct: 14 QALEADVQAGMTAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A +
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVDSANTRWGNSVAVLTGDFLFARA-SHI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ S L G++ + + ++ E YL V+ KT L + + +
Sbjct: 133 LADLGPEAVRVQSEAFERLVTGQILETAGPQDGRDPVEHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G V L YG LG+AFQL DDVLD + +E GK G D R G PT+PV+
Sbjct: 193 MMSGADERVVDVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTMPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + + +A +R + AL Y + A+ +L
Sbjct: 253 RERAARLGLAEDVALCELLDSDLTDDDRHAEALAALRTHPALEQARRDTVRYAEDARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + + +LME+ D + R
Sbjct: 313 APLRECDARAALMELCDAVVHR 334
>gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
Length = 327
Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 162/323 (50%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ D+ + ++ ++++ GGKR+RP+L L A
Sbjct: 6 LSLIQQPIQTDLATFISRFNASLEHSDGLLSMALEHIKQRGGKRMRPILILLLAKNYGTI 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +E +HTA+L+HDDVVD+S+ RRG+ + + N+ +VLVGD++LS A
Sbjct: 66 TDAAHHAAVGLELLHTASLVHDDVVDESSERRGQSSVNATYNNKVAVLVGDYILSTALLH 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T+S + +L+ + TL++GE+ QL+ +N +++EE Y VI+ KTA LF V+
Sbjct: 126 VAYTQSDYIINSLAQLGRTLSKGEILQLTNIQNEEISEEVYYQVIEQKTAALFETCAAVA 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG N +A + +G +LG FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 186 AKAAGASNESIEAARKFGRDLGTIFQIRDDIFD-YYDSREIGKPTGNDMAEGKLTLPVIH 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + G IS E + + N + E R Y A +
Sbjct: 245 ALHVTADPEMLKLGKKVKKGNISPEEIATLVAFTKANGGIEYAEQRMNEYRISALQFIDN 304
Query: 301 -LPDSSWKKSLMEVVDFCLQRLN 322
+ D + +L+ +DF ++R +
Sbjct: 305 EVKDPDIRAALIAYIDFVIKRKS 327
>gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
Length = 315
Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 130/313 (41%), Positives = 194/313 (61%), Gaps = 4/313 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR----GDNHVLL 67
M+ N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA++ + Y+ HV L
Sbjct: 1 MQACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASSRLCGYKSTPENQRHVGL 60
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S
Sbjct: 61 AACVEFIHTATLLHDDVVDESNLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + LS + T+AEGE+ Q+ +L + YL VI KTA LF+AA V +++A
Sbjct: 121 KVMAILSDASATIAEGEVLQMVTQNDLSTPVDRYLEVIHGKTAALFAAACRVGAVVADRP 180
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ AL +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+
Sbjct: 181 EAEELALDRFGTNLGMAFQLVDDALDYAADQQILGKTVGDDMREGKITLPVLAAYEAGSA 240
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ FW+ I G+ + +L A ++ + A+ T RA +Y +A D+L PDS +
Sbjct: 241 EDRAFWERVIEKGEQTEADLPHALALIEKTGAIATTIARAQAYAAEAVDALSIFPDSELR 300
Query: 308 KSLMEVVDFCLQR 320
+ + E V + + R
Sbjct: 301 RLMTETVQYTVDR 313
>gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS)
(dimethylallyltransferase) [Arabidopsis thaliana]
Length = 322
Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 94/326 (28%), Positives = 172/326 (52%), Gaps = 11/326 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----- 56
+ L ++ D++++N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 1 ETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELA 60
Query: 57 -LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
L+ H L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+ +
Sbjct: 61 GLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFA 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
QA + ++ E ++ +S V A GE++Q S + DV +DY+ KTA L +A
Sbjct: 121 QASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G T
Sbjct: 181 STKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNIT 240
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI A + + + G L++A I+R + + A + A
Sbjct: 241 APVIFALENEPRLREIIESEFCEPGS-----LEEAIEIVRNRGGIKKAQELAKEKAELAL 295
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP S ++ +L ++V F L+R+
Sbjct: 296 KNLNCLPRSGFRSALEDMVMFNLERI 321
>gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 333
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V ++ I S+ + + ++L +GGKR RPM+ L A + +
Sbjct: 21 VRAGLTGVERVLRDAIRSEFAFVTEASRHLTDAGGKRFRPMVVLLAAHFADPAAPEVIQA 80
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE H +TL HDDV+D++ LRRG +A W N ++LVGD+L ++A + + +
Sbjct: 81 AAAIELTHLSTLYHDDVMDEAPLRRGAASANARWTNTVAILVGDYLFARASEITADLGPE 140
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
TL EG++R+ D E YL V+ KTA L +A+ + ++++G
Sbjct: 141 ATRILAQT-IATLCEGQIRETVGPMPDDDPVEHYLRVVTGKTASLIAASGRLGAMMSGAD 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L ++G +G+ FQL DD++D + GK G D R G TLPV+ RG
Sbjct: 200 PVTADILATFGERIGVCFQLSDDIIDVSSATADSGKTPGTDLRAGVLTLPVLYT-LRGRD 258
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + + G + +++A I+R + + + S+ A+ L LP+SS +
Sbjct: 259 KGADRLRELVAGGFTADPAVEEALEILRGHAGMDEARAELRSWAASARGCLAPLPESSAR 318
Query: 308 KSLMEVVDFCLQRL 321
+L + DF + R
Sbjct: 319 TALESLTDFVIART 332
>gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
Length = 336
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 1/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + +V+ L+ + + I +L +GGKR RP+LTL +A + E D
Sbjct: 18 ELMAHLQDGLARVDALLRTVVDHEDPFIAAASSHLAQAGGKRFRPLLTLLSAELGEGVTD 77
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ V A +E H A+L HDDV+D++ +RRG +A V+ N T++LVGD L +A ++
Sbjct: 78 DVVRAAAGVELTHLASLYHDDVMDEAEVRRGVPSANAVYDNSTAILVGDLLFGKASELIA 137
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ L + ++D + + ++ +A +
Sbjct: 138 GLGAEAVLIQAQTFVRLCSGQIRDDRPCPPDVDPIDYYLGVLADKTGSLTATACRYGAMF 197
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
G + + ++SYG +G+ FQL DD++D + GK G D R G TL V+ A
Sbjct: 198 S-GGSPELVETMRSYGEKVGMTFQLADDLIDIASDSEASGKTPGTDLREGVDTLAVLRAK 256
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + +D + +A ++R++ AL Y ++A+ L LP
Sbjct: 257 ASTDPADERLLELLHSDLSGDEAAVSEALTLLRQHPALEAARAETYGVAREAQALLDPLP 316
Query: 303 DSSWKKSLMEVVDFCLQRL 321
++ K +L + ++R+
Sbjct: 317 ETPAKTALQTLALSVVERV 335
>gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
Length = 334
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L ++E+V ++ + ++ + +L+ +GGKR R +L L +A +
Sbjct: 17 ETLAREIQAELEQVEKVLRDAVAESDPLLREAASHLLEAGGKRFRAILVLLSARFGDATN 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A +E H ATL HDDV+D++ LRRG +A WGN ++L GD++ ++A ++
Sbjct: 77 PDLVSAAAVVELTHVATLYHDDVMDEAELRRGSPSANRRWGNTIAILTGDYVFARASEIL 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++ L G++ + + + + YL VI KTA L +++ +
Sbjct: 137 ADLGTEAVRLQAQTFGR-LVRGQILETAGPRPGVDPMKHYLDVIADKTASLIASSARFGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V + L G LG+AFQL DD+LD E E GK G D R G TLP++ A
Sbjct: 196 MVGNADPEVVETLTRAGDALGMAFQLSDDILDVASETEESGKTPGTDLREGVLTLPMLYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q ++ E +A ++R + A+ + ++G++A+ L L
Sbjct: 256 LQGTEPEHARLRSLL--GRPLNDEEAAEALALLRAHPAMDEARADLAAWGERAQAELATL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+ K + + + D+ + R
Sbjct: 314 PECPAKTAFLAICDYVVNRK 333
>gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
Length = 332
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 190/322 (59%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + + +
Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGHA 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPDHHQLAAIIEFIHTSTLLHDDVVDESNLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELERMPVMQILADATNRIAEGEVLQLLHVHNPDTDETAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +GV + +QAL YGM+LG AFQ+ DDVLDY +E+GKN+G+D GK TLP+I
Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANADELGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + DG S + + +R L + RA Y + A+ +L
Sbjct: 253 AMAHSDDATRERLRAIVQDGDASA--MPEVLAAIRATGGLEYSRRRAEEYAEAAERALDG 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L D+ +L + + +QR +
Sbjct: 311 LADNDAVAALRGLARYAVQRSH 332
>gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
Length = 323
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + ++ ++L +GGKR+RP + L A
Sbjct: 6 SLFAPVEADLYLLTENLKNLVGARHPILYAAAEHLFGAGGKRVRPAIVLLIARATVLDSD 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S++RR ++ N+ +VL GDFL Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESSVRRNVPTVNSMFNNRVAVLAGDFLFGQSAW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V +AEGE++Q T + YL KTA L + + +
Sbjct: 126 YLANLNNLEVVKLLSQVIKDMAEGEIQQGLTRFEASTTIDTYLEKTYKKTASLIANSSKS 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L++GV V + L YG +LG+AFQ+VDD+LD+ +GK G D +G T PV+
Sbjct: 186 AGLLSGVSAEVAENLYRYGNHLGLAFQIVDDILDFTASTEVLGKPAGSDLISGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + + I +++ +A ++ E+R + + A + + A D+L
Sbjct: 246 YAM-----EEKPYLEVLIEREFAQPDDINQALALVMESRGIERSRELAAYHARLALDNLT 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S +L+E+ D+ L R+
Sbjct: 301 PLKPSPATTALVELTDYVLSRM 322
>gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
O11]
gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
O46]
Length = 314
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 2 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 62 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 122 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 182 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 238
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + L++ I+R++ ++ + + + Y KA D + LPD
Sbjct: 239 KNPDFKLKIEQLRRDSERKELEECIQIIRKSDSIDEAKAVSSKYLSKALDLISELPDGHP 298
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 299 KSLLLSLTKKMGSR 312
>gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
Length = 323
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 132/322 (40%), Positives = 196/322 (60%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A Y+
Sbjct: 4 LSDIQSLIKLDLKKTDEILINRLSSNVALINQMSHYIIHAGGKRLRPLLLLLCARATGYQ 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H L+A IE IHTATLLHDD+VD+S+ RRGK VWGN S+LVGDFL S+AF +
Sbjct: 64 GTHHYLMAVVIELIHTATLLHDDIVDESSTRRGKDTVNEVWGNAPSILVGDFLYSRAFEI 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + LS +AEGE+ QL +N ++TE +Y VIK KTA LF AA ++
Sbjct: 124 MVEPNLMSIMCILSKTTNNIAEGEVLQLLNCQNDELTEVEYYAVIKQKTACLFQAATQIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L++ V + ALK+YG++LG AFQ++DDVLDY + +GK +G+D GK TLP+I
Sbjct: 184 GLLSAVNKTQETALKNYGLHLGNAFQIIDDVLDYESDAKTIGKEVGDDLSEGKTTLPMIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +K K IN S + + I++ +A T +AY Q AK SL
Sbjct: 244 ALSHTSGNDKQLLKDAINQADNSK--IVQVIKILQSVKAFDYTRNQAYKSAQLAKQSLNL 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P+S +K +L+ + D LQR +
Sbjct: 302 IPNSEYKDALILLCDLSLQRQS 323
>gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 323
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 132/320 (41%), Positives = 196/320 (61%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ L D++K + +++KR+ S+V +I + Y+I +GGKRLRP+L L A Y+G+
Sbjct: 6 DIQKLLKSDLKKTDKVLIKRLSSNVALINQMSSYIINAGGKRLRPLLLLLCAKATGYQGN 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+H L+A IE IHTATLLHDD+VD+SA RRGK A VWGN SVLVGDFL S+AF M++
Sbjct: 66 HHHLMAVVIELIHTATLLHDDIVDESATRRGKDTANEVWGNAASVLVGDFLYSRAFEMMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E S ++ LS ++AEGE+ QL +N +++E +Y +VI+ KTA LF A+ ++ +
Sbjct: 126 EPDSMRIMKILSKTTNSIAEGEVLQLLNCQNSELSEAEYFNVIERKTACLFQASTQIGGI 185
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++ AL++YG++LG AFQ++DD LDY + MGK +G+D GK TLP+I A
Sbjct: 186 LSNADEKQELALRNYGLHLGNAFQIIDDALDYESDAQTMGKEVGDDLAEGKTTLPMICAL 245
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
R +E K+ IN+ S + K I+ A T +A AK SL L
Sbjct: 246 SRTLGQEHELLKNAINNADNSK--IDKIIKILDSVNAFEYTHNKAQESADLAKKSLAILE 303
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+S +K +L+ + D LQR +
Sbjct: 304 ESDYKNALVLLCDLSLQRKS 323
>gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 332
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 188/322 (58%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + +
Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGRAVGNV 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELERMSVMQILADATNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +GV + +QAL YGM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I
Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + DG S + + +R L + RA Y + A+ +L
Sbjct: 253 AMAHSNDATRERLRTIVQDGDASA--MPEVLAAIRATGGLEYSRARAEEYAEAAERALDG 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L D+ +L + + +QR +
Sbjct: 311 LGDNDAVAALRGLARYAVQRSH 332
>gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
Length = 323
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 8/318 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDN 63
D++ + + + + ++ ++L +GGK +RP + L + +
Sbjct: 10 PVEDDLKLLRNNLKSLVGTRHPILSAAAEHLFDAGGKHIRPAIVLLVSKATMLEGDITPH 69
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA E IHTA+L+HDD+VD++ LRR ++ N+ +VL GDFL +Q+ +
Sbjct: 70 HRRLAEITEMIHTASLVHDDIVDEAVLRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 129
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + ++ LS V AEGE+ Q + +T + YL KTA L + + + ++++
Sbjct: 130 LDNLQVVKLLSEVIRDFAEGEISQGINRFDTSLTLDSYLDKSYYKTASLIANSAKSATIL 189
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + ++ +YG LG+AFQ+VDD+LD+ +GK G D NG T PV+ A
Sbjct: 190 SNSSLDIINSIYTYGRCLGLAFQIVDDILDFTSPTKVLGKPAGSDLINGNITAPVLFAM- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E + I ++++KA I+ E++ + ++ A Y A + L CL
Sbjct: 249 ----EETPYLAKLIEREFNQEKDIEKALAIVAESKGIQRSQELAKYYALLAIEQLDCLKP 304
Query: 304 SSWKKSLMEVVDFCLQRL 321
S + +SL E+V++ L RL
Sbjct: 305 SPFSQSLTELVNYVLDRL 322
>gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus]
Length = 317
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 105/325 (32%), Positives = 169/325 (52%), Gaps = 15/325 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
ML++ K E +N I + + + + ++LI +GGKRLRP+++L L
Sbjct: 1 MLKEEIAKRAEIINKAIEELLPEREPIGLYKAARHLIKAGGKRLRPVISLLAVEALGKDY 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A +IE IH TL+HDD++D +RRG V+G T++L GD L ++AF ++
Sbjct: 61 RKIIPAAVSIETIHNFTLVHDDIMDRDEMRRGVPTVHRVYGEATAILAGDTLFAEAFKLL 120
Query: 122 IETK-----SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ ++A E LS V + EG+ +S K V+EE+YL +++ KT VL +A+
Sbjct: 121 TKCDVESEGIRKATEMLSDVCIKICEGQYYDMSFEKKESVSEEEYLRMVELKTGVLIAAS 180
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + +AL YG+ GI FQ+ DD+LD E GK+ G D GK TL
Sbjct: 181 AALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEET---GKDWGSDLLKGKKTL 237
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
VI AF++G K + K V ++ +RE A+ A ++AK
Sbjct: 238 IVIKAFEKGVKLKT------FGKEKADVSEIRDDIEKLRECGAIDYAASMARKMAEEAKR 291
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+S K++L+E+ DF + R
Sbjct: 292 KLEVLPESKAKETLLELTDFLVTRK 316
>gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
Length = 328
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D+ V L+ + + + L+ +GGKR+RP LTL ML +G+ + L
Sbjct: 16 IQDDLRAVETLMRSQADERYPDLQSALDLLLSAGGKRIRPTLTLLAGKMLRAKGEPLLHL 75
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S LRRG W +VL GD+L ++A + +T S
Sbjct: 76 AAAIEMLHTATLVHDDLIDGSLLRRGMPTLNSRWSPGATVLTGDYLFARAANLAAQTDSI 135
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ S + GEL Q+ ++ Y I +KTA LF + + ++L+
Sbjct: 136 PVMKLFSETLSIIVGGELTQMFSTRCKADRTN-YYQRIYAKTASLFETSAKSAALLCLTS 194
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+AL++YG ++G+AFQ++DD+LDY GE +GK IG D R G TLP I +
Sbjct: 195 ELHTEALRAYGYSVGMAFQIIDDILDYTGEQATLGKPIGSDLRQGLVTLPAIYFAEM-HP 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + L + +R ++A+ + A + + A + L +
Sbjct: 254 EHPLTINLIEGNCIQDQDVLDELIGAIRSSKAIQQSHQEAIQFVETALNHLSIFDPCPER 313
Query: 308 KSLMEVVDFCLQRL 321
+L E+ + R
Sbjct: 314 LALEELAHHVVDRK 327
>gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus E1410]
gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M876]
gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus C160]
gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M899]
gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus C101]
gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M809]
gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M1015]
gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA252]
gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus E1410]
gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M876]
gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus C101]
gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M899]
gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus C160]
gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M1015]
gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M809]
Length = 319
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA + +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase
subunit 2) (spore germination protein c3)
[Staphylococcus aureus subsp. aureus ST398]
gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
membrane protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 319
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA D +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALDLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 332
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHV 65
+++KV + + I S + + + +L+ SGGKR+RP + + ++
Sbjct: 19 INNEIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTY 78
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E
Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 138
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+S + GEL Q N + T +YL I KTA+L + +V ++ +
Sbjct: 139 DTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 198
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L
Sbjct: 199 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + K + + + I+R++ ++ ++ + Y KA + + L D
Sbjct: 256 RKNKTFKDKISQLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDELEDGP 315
Query: 306 WKKSLMEVVDFCLQR 320
K+ +++ R
Sbjct: 316 NKELFRKLIKKMGSR 330
>gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Archaeoglobus fulgidus DSM 4304]
gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
{Methanobacterium thermoautotrophicum [Archaeoglobus
fulgidus DSM 4304]
Length = 326
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 105/327 (32%), Positives = 170/327 (51%), Gaps = 15/327 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ML++ K E +N I + + + + ++LI +GGKRLRP+++L L
Sbjct: 8 IAMLKEEIAKRAEIINKAIEELLPEREPIGLYKAARHLIKAGGKRLRPVISLLAVEALGK 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +IE IH TL+HDD++D +RRG V+G T++L GD L ++AF
Sbjct: 68 DYRKIIPAAVSIETIHNFTLVHDDIMDRDEMRRGVPTVHRVYGEATAILAGDTLFAEAFK 127
Query: 120 MVIETK-----SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++ + ++A E LS V + EG+ +S K V+EE+YL +++ KT VL +
Sbjct: 128 LLTKCDVESEGIRKATEMLSDVCIKICEGQYYDMSFEKKESVSEEEYLRMVELKTGVLIA 187
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ G + +AL YG+ GI FQ+ DD+LD E GK+ G D GK
Sbjct: 188 ASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEET---GKDWGSDLLKGKK 244
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL VI AF++G K + K V ++ +RE A+ A ++A
Sbjct: 245 TLIVIKAFEKGVKLKT------FGKEKADVSEIRDDIEKLRECGAIDYAASMARKMAEEA 298
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
K L LP+S K++L+E+ DF + R
Sbjct: 299 KRKLEVLPESKAKETLLELTDFLVTRK 325
>gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus ED133]
Length = 314
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 2 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 62 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 122 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 182 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 238
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + + I+R++ ++ + + + Y KA D + LPD
Sbjct: 239 KNPDFKLKIEQLRRDSDRKEFEDCIQIIRKSDSIDEAKAVSSKYLSKALDLISELPDGHP 298
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 299 KSLLLSLTKKMGSR 312
>gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus
epidermidis ATCC 12228]
gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus
epidermidis ATCC 12228]
Length = 339
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHV 65
+++KV + + I S + + + +L+ SGGKR+RP + + ++
Sbjct: 26 INNEIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTY 85
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E
Sbjct: 86 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 145
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+S + GEL Q N + T +YL I KTA+L + +V ++ +
Sbjct: 146 DTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 205
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L
Sbjct: 206 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 262
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + K + + + I+R++ ++ ++ + Y KA + + L D
Sbjct: 263 RKNKTFKDKISQLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDELEDGP 322
Query: 306 WKKSLMEVVDFCLQR 320
K+ +++ R
Sbjct: 323 NKELFRKLIKKMGSR 337
>gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
Length = 323
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 8/321 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D++ + + + + + ++ ++L GKR+RP + L + +
Sbjct: 7 LFSPVETDLQLLTDNLKQLVGARHPILYAAAEHLFSVHGKRVRPAIVLLISRTTMPNQEI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S LRRG ++ N+ +VL GDFL +Q+
Sbjct: 67 TPKHRRLAEITEMIHTASLVHDDVVDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LAEGE++Q + ++ YL KTA L + + + +
Sbjct: 127 LANLDNLEVVKLLSKVIMDLAEGEIQQGLNRFDTGMSINAYLEKSYYKTASLVANSSKAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L++GV + + L SYG NLG+AFQ+VDD+LD+ G +GK D ++G T P +
Sbjct: 187 GLLSGVSAELAEDLYSYGQNLGLAFQIVDDILDFTGSTETLGKPAASDLKSGNLTAPTLF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E I +L++A +++E+ A+ + A + + A + +
Sbjct: 247 TLEETPSLEA-----LIEREFAQEGDLEQAITLIKESSAIQRSRELAAHHAKLAVEHISK 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PD +K+L+E+ D+ L RL
Sbjct: 302 FPDCDSRKALIELSDYVLSRL 322
>gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus H19]
gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus H19]
Length = 319
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDK 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA + +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
Length = 338
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 117/325 (36%), Positives = 191/325 (58%), Gaps = 4/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y
Sbjct: 13 IDKLSKFLDKDMSEVNNVILDCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNY 72
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G +H LA A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F
Sbjct: 73 HGLSHYYLAAAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFK 132
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++I++ S AL++ SL T+ GE++QL+ +TE++Y VI++KTA LF + E
Sbjct: 133 LMIKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCE 192
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++I+ +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+
Sbjct: 193 IAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKATLPI 252
Query: 239 ILAFQRGTKRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I+A+ + + ++FW + ++ + A ++ + L + + Q+ D
Sbjct: 253 IMAYNCASSQNERDFWHRIFLYREQKEDDFQYALSLLYTHNVLALIKQKISQLEQQVYDI 312
Query: 298 LRCLPDS-SWKKSLMEVVDFCLQRL 321
+ L S +K L + + + R+
Sbjct: 313 ITKLNISLEYKNYLENLTKYIINRI 337
>gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus C427]
gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus C427]
Length = 319
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA + +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 333
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 5/319 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
L ++ +++V ++ + + S+ + + +L+ +GGKR+RP+ T+ A + +
Sbjct: 18 LAEVVQSGLDEVEGILREVVRSEFNPVMETSLHLVEAGGKRIRPLFTILAAQFGPSWDRE 77
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ V A +E H ATL HDDV+D++ +RRG +A W N ++L GD+L + A ++
Sbjct: 78 SVVKAAAVVELTHLATLYHDDVMDEATMRRGAASANAKWNNSIAILTGDYLFAHA-STLV 136
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
EA +S L G++R+ + + E YL I KT L + A +
Sbjct: 137 ADLGTEAARTISRTFGELVTGQMRETMGPREGEDPVEHYLTTIAEKTGSLIATAARFGGM 196
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ AL++YG +G AFQ+ DDV+D E GK G D R G TLP++ A
Sbjct: 197 FSDATEEQVAALQAYGDVIGSAFQISDDVIDIASPPEESGKTPGTDLREGVKTLPMLYA- 255
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + +A ++R + L Y +A+ L LP
Sbjct: 256 --LQDEPDSRLARLLAAPIEDDAEVLEALELLRASSGLQRARKTLDEYADRARSCLAVLP 313
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ + +L V ++ + R
Sbjct: 314 EGRARDALESVSEYVVSRS 332
>gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 332
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 20 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 79
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 80 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 139
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 140 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 200 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA D + LPD
Sbjct: 257 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALDLISELPDGHP 316
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 317 KSLLLSLTKKMGSR 330
>gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
A8]
gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
A8]
Length = 308
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 183/309 (59%), Gaps = 3/309 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y G +H LLA +
Sbjct: 1 MKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYEGTHHQLLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S +
Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEANSMRVMS 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG
Sbjct: 121 ILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + GT ++
Sbjct: 181 AAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIRVMEVGTPEQQQ 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G + A AL A + A+ +L P S + SL+
Sbjct: 241 LIRDAIKTGDADFAAVAAAIQA---TDALEHARQAAVAEADLARQALSGYPISPFLNSLL 297
Query: 312 EVVDFCLQR 320
E F + R
Sbjct: 298 EFCAFAVNR 306
>gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus MN8]
gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus MN8]
Length = 332
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 20 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 79
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 80 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 139
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 140 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 200 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 257 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLISELPDGHP 316
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 317 KSLLLSLTKKMGSR 330
>gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
Length = 327
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 12/324 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ K E +N + + + E + +LI +GGKRLRP+LTL + +
Sbjct: 9 DEILKEIKKRSEVINKAMEDFLDLGEPEELYKASYHLIKAGGKRLRPVLTLLSCEAIGRD 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A AIE IH TL+HDD++D RRG ++G T++L GD L ++AF +
Sbjct: 69 WKPILPSAIAIELIHNFTLIHDDIMDKDEYRRGVPTVHRLFGEATAILAGDTLFAKAFEI 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIKSKTAVLFSAA 176
+ + + ++ ++ + + + + K + A
Sbjct: 129 LSKCNVEAENVIRAVEVIADVCVKICEGQYMDMEFEKRDDVSVEDYLKMVEKKTGVLIAC 188
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + + L +G+N GI FQ+ DDVLD G +GK+ D GK T+
Sbjct: 189 SCSIPAVLYGEEKYVKPLWDFGLNCGIGFQIHDDVLDLVGGEK-IGKDWCSDLVEGKKTI 247
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A + G + GK S + ++A ++E A+ A + ++ K
Sbjct: 248 VYLRAREMGVE------IDIFGKGKASDDEKRRAVEKLKECGAIDFASEMAKEFVERGKK 301
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
L LPDS+ K LM + D+ + R
Sbjct: 302 YLDVLPDSNAKNVLMLLADYLVTR 325
>gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + +V L+ + S+ + + K+LI +GGKR R ML L A
Sbjct: 14 ERLAQDLASGLAEVEKLLRSSVESEDAFVTEASKHLIEAGGKRFRAMLVLLAAQFGSPEA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A IE H ATL HDDV+D++ +RRG +A W N ++L GD+L +QA ++
Sbjct: 74 PGVVPGAVVIELTHLATLYHDDVMDEAPVRRGSPSANARWDNTVAILTGDYLFAQASEIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + L G++R+ + + Y+ V+ KT L + + +
Sbjct: 134 ADLGADVIRIQAQTFSR-LVRGQIRETIGPRPGEDHVAHYIDVLADKTGSLIATSGRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L++G + L +G+ +QL DD+LD + E GK G D R G TLPV+
Sbjct: 193 LLSGASPEIVDRLTRACEAIGVGWQLGDDLLDVASDSVESGKTPGTDLREGIRTLPVLYV 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + G ++ +++ + ++R N A+V ++ +A+ L L
Sbjct: 253 LSSDAPEDARLRELL--AGPVAEDDVAETLRLLRANPAMVRARAELVAWVDRARADLSGL 310
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD + + + + D+ ++R
Sbjct: 311 PDIPARAAYLALCDYVVERS 330
>gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 334
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L ++EKV L+ + + S ++ + +L+ +GGKR R L L A +
Sbjct: 17 DALAREVQDNLEKVEDLLRESVASSDPLLTEAASHLLAAGGKRFRATLVLLAAHFGDPSV 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A +E H ATL HDDV+D++ LRRG+ +A WGN ++L GD++ ++A M+
Sbjct: 77 PDLIPAAAVVELTHVATLYHDDVMDEAELRRGEPSANQRWGNSVAILTGDYVFARASEML 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++ + L +G++ + S + + YL VI KTA L +++ E
Sbjct: 137 ADLGTEAVRLQATTFGR-LVQGQILETSGPQEGTDPLDHYLRVISDKTASLIASSAEFGG 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ V + LG+AFQL DD+LD E + GK G D R G TLP+ A
Sbjct: 196 MFGKVDPETIGTVTRACDALGMAFQLADDLLDVASESTDSGKTPGTDLREGVLTLPMFYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ A + + + A+ + E + KA+ L L
Sbjct: 256 LRSRDAADERLKSLLGRPLDDEEAEEALALLRV--HPAMAEAEATLRGWADKARAELATL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+S + + + D+ ++R
Sbjct: 314 PESPARGAFEALCDYVVERS 333
>gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 322
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 10 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 69
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 70 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 130 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 190 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 247 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLISELPDGHP 306
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 307 KSLLLSLTKKMGSR 320
>gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis
HTCC2503]
gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis
HTCC2503]
Length = 317
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 138/316 (43%), Positives = 196/316 (62%), Gaps = 1/316 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ +E N +IL + S V +IP+V ++LI +GGKRLRP++TLA A + G+ L
Sbjct: 1 MLSGQLESTNQVILDHLASSVPLIPEVARHLIAAGGKRLRPLMTLAAAELCGETGEGPRL 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA A+E IH ATLLHDDVVD+SALRRG A +V+GN+ SVLVGDFL ++AF +++ T S
Sbjct: 61 LAGAVELIHAATLLHDDVVDESALRRGLRTANIVFGNKESVLVGDFLFARAFELMVRTGS 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E L LS +C +AEGE+ QL+ S+NL+ + YL VI +KTA LF+AA E +++AG
Sbjct: 121 IEVLGILSKASCIIAEGEVLQLTTSQNLETPQTIYLDVISAKTAALFAAAAEAGAVVAGG 180
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
A+++YG+N GIA+QLVDD LDY+ +GK G+DFR GK TLPVI A+ T
Sbjct: 181 DAEKVAAMRAYGLNFGIAYQLVDDALDYQSSGAVLGKTAGDDFREGKMTLPVIRAYAAST 240
Query: 247 -KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
E+ FW+ TI D ++ +A +MR +R + A Y + A SL P
Sbjct: 241 SDEERQFWQRTIRDKDQRPDDFARANELMRRDRIVEACLQEARGYAEAAASSLAVFPVGD 300
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L ++ +R
Sbjct: 301 LRGTLEDLAIGSAERT 316
>gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
RF122]
gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
RF122]
Length = 319
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + + I+R++ ++ + + + Y KA D +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFDECIQIIRKSDSIDEAKSVSSKYLSKALDLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
epidermidis FRI909]
Length = 319
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
M L +++KV + + I S + + D +L+ SGGKR+RP + +
Sbjct: 1 MAKLN--INNEIKKVEKRLEEAIISSDQTLQDASFHLLSSGGKRVRPAFVILSGQFGSNN 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+
Sbjct: 59 KTSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E +S + GEL Q N + T +YL I KTA+L + +
Sbjct: 119 KHLSEISDTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQ 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV
Sbjct: 179 VGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPV 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K + K + + + I+R++ ++ ++ + Y KA + +
Sbjct: 239 LLEM---RKNKTFKDKVSQLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L D K+ +++ R
Sbjct: 296 DELEDGPNKELFRKLIKKMGSR 317
>gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 328
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 113/321 (35%), Positives = 194/321 (60%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+L+D+ D+ + I + + DV++ D++ +L+ SGGK++RP L ML Y
Sbjct: 10 DILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNYS 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++ V +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF
Sbjct: 70 GEDRVKVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRW 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE + L LS + +L GE++Q++ N ++Y +I KTA LFSA E +
Sbjct: 130 LIECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFDIIGKKTASLFSACCEAA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S+I+ ++ + LK++G+N G+AFQ++DD LDY + GK +G+DF GK TLP I+
Sbjct: 190 SVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAII 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+++G+ E+ FW+ + ++ N +A + + A+ + +A Y A++++
Sbjct: 250 AYEKGSPAEQKFWEKCFS---LAERNFDQALHYINHHNAIQLSIEKARHYVNMAQNNINT 306
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
DSS+K +L++ ++ ++R
Sbjct: 307 FSDSSYKIALIDFLNASIERQ 327
>gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
lyrata]
gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 174/327 (53%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
++ L ++ D++++N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 95 LENLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAEL 154
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L+ H L IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+
Sbjct: 155 AGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMF 214
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+QA + ++ + ++ +S V A GE++Q S + DV +DYL KTA L +
Sbjct: 215 AQASWYLANLENLQVIKLISQVIKDFASGEIKQASSLFDCDVELDDYLLKSYYKTASLVA 274
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G
Sbjct: 275 ASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 334
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A + + + G L++A I+R + + A G+ A
Sbjct: 335 TAPVIFALENEPRLREIIESEFCEPGS-----LEEAIEIVRNRGGIKKAQELAKEKGELA 389
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP S ++ +L ++V F L+R+
Sbjct: 390 LKNLNCLPRSGFRSALEDMVMFNLERI 416
>gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 328
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 112/320 (35%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIP-DVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D+ D+ +N + K + + + D++ +L+ SGGK++RP L ML Y
Sbjct: 10 DKLDDIVSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYS 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF
Sbjct: 70 GENRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRW 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE + L LS + L +GE++Q++ + E+Y +I KTA LFSA E +
Sbjct: 130 LIECGNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFDIIGEKTASLFSACCEAA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK TLP I+
Sbjct: 190 STVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVTLPAII 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+++G+ E+ FW+ + + + +A + + A+ + +A Y A++ +
Sbjct: 250 AYEKGSPAEQKFWEKCFSSARHN---FDQALHYINHHNAIQLSMEKARHYINMAQNDIST 306
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
DS +K +L+ ++ ++R
Sbjct: 307 FSDSFYKTTLINFLNASIER 326
>gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 337
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 104/324 (32%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L ME V +++ + SDV I +LI +GGKR RP+L + A +
Sbjct: 14 RDLTRDVQAGMEAVEAALIEAVKSDVPFITVTASHLIEAGGKRFRPLLVMLAAQFGDPTA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++ +RRG +A W N ++L GDFL S+A V
Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAPVRRGAPSANSRWDNSVAILTGDFLFSRASQ-V 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ S L G++ + + + D YL VI KT L + A S
Sbjct: 133 LSDLGTEAVRIQSDAFERLVTGQILETAGPRPEDDPLRHYLDVISGKTGSLIAVACRFGS 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+AG + + L YG +G AFQL DDVLD + +E GK G D R G PTLPV++
Sbjct: 193 LMAGAERWIVDLLTQYGERIGTAFQLADDVLDIASDGHESGKTPGTDLREGVPTLPVLML 252
Query: 242 FQRGTKREKNFWKSTIN----DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
Q + D +A ++R + AL Y ++A+
Sbjct: 253 RQTPADPDDPEDVRLRELLDTDLAADDAAHAEALRLLRRHPALERARRETLRYAEEARAL 312
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LPD K +L E+ D R
Sbjct: 313 LDTLPDCPAKAALQELCDTVAIRT 336
>gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
Length = 323
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D++ + + I + ++ ++L +GGKRLRP + L + + G+
Sbjct: 6 ELLHPVEADLDTLLADLRSLIGAGHPILQAAAEHLFAAGGKRLRPGIVLLLSRAVAPDGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++A RRG + ++ +VL GDFL +QA
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNHRVAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V LA+GE++Q + + E YL KTA L + +
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLFRYDTTQSFETYLEKSYCKTASLIANSARA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G+ L +G LG+AFQ+VDD+LD+ G ++GK D +G T P +
Sbjct: 186 AGVLSGLPAPRLDDLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q I +L++A ++R A+ + A + ++A ++L
Sbjct: 246 YALQERPALAG-----LIEREFSEEGDLEQALELVRGCDAIPRSRALAEQFTREAAEALE 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S + +L + DF L RL
Sbjct: 301 WLQPSEPRSALRALPDFVLSRL 322
>gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus CGS00]
Length = 319
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKYSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA + +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21193]
Length = 319
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 153/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ +++ + Y KA D +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4]
gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus
273-4]
Length = 349
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 112/321 (34%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
++ + D E ++ + + S V+++ +V +++I +GGKR+RP++TL A M
Sbjct: 29 NIQSIVADDFEIMDKQVFGSLNSKVQLVMNVSQHVINAGGKRMRPLITLLCARMFNDEPS 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF ++
Sbjct: 89 QQAMHLAAITEMLHTATLVHDDVIDESGQRRGKATANATWDNATAVLVGDYLIARAFNLL 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + ++
Sbjct: 149 VGFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAA 208
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ Q QAL +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I A
Sbjct: 209 IL-QGQIQHLQALADFGQHFGNAFQIIDDVLDYSGDSELMGKNLGDDLAEGKPTLPTIKA 267
Query: 242 FQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K ++ + N ++ ++R + +L + RA + A+ +L
Sbjct: 268 LELLKDSNKEDYEQLRIAVQTGKTPNAEQLIALVRHSGSLEYCKQRALEETKLAQQALSS 327
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ +++ L ++ + RL
Sbjct: 328 LPDNRYRQGLYQLTELASARL 348
>gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 323
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 164/321 (51%), Gaps = 8/321 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D+ + + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 7 LFTPVEADLRILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ +VL GDFL +Q+
Sbjct: 67 SLGHRRLAEITEMIHTASLVHDDVVDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LA GE++Q + ++ E YL KTA L + + + +
Sbjct: 127 LANLDNLEVVKLLSEVIMDLAAGEIQQGLNRFDTSLSTETYLKKSYYKTASLIANSAKSA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ V L +YG +LG+AFQ+VDD+LD+ G ++ +GK D ++G T PV+
Sbjct: 187 GILSNVSPQSANNLYNYGKDLGLAFQIVDDILDFTGSMDTLGKPAASDLKSGNLTAPVLF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ + I +L++A ++ +++ + A + + A+ +
Sbjct: 247 AL-----EEQPCLEVLIEREFAQEGDLEQAVKLISDSQGIPRARELAAHHAKLARQHIAD 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L S K++L+ + D+ L RL
Sbjct: 302 LEASESKQALINMTDYVLSRL 322
>gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
Length = 325
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 112/320 (35%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIP-DVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D+ D+ +N + K + + + D++ +L+ SGGK++RP L ML Y
Sbjct: 7 DKLDDIVSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYS 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF
Sbjct: 67 GENRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRW 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE + L LS + L +GE++Q++ + E+Y +I KTA LFSA E +
Sbjct: 127 LIECGNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFDIIGEKTASLFSACCEAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK TLP I+
Sbjct: 187 STVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVTLPAII 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+++G+ E+ FW+ + + + +A + + A+ + +A Y A++ +
Sbjct: 247 AYEKGSPAEQKFWEKCFSSARHN---FDQALHYINHHNAIQLSMEKARHYINMAQNDIST 303
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
DS +K +L+ ++ ++R
Sbjct: 304 FSDSFYKTTLINFLNASIER 323
>gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
Length = 327
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 134/311 (43%), Positives = 193/311 (62%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M ++ +I +R+ SDV ++ V +Y++ +GGKRLRP L L L YRGD LA +
Sbjct: 19 MRGMDAVIERRLKSDVPLVSQVSQYIVAAGGKRLRPALLLLMCGALGYRGDQRYNLAAVV 78
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M++E ++
Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRATANEAFGNPASVLVGDFLYSRAFQMMVEAGDMRVMQ 138
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE+ QL + ++E+ YL VI+SKTA LF A+ +++L+A V
Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDATLSEDGYLRVIRSKTAKLFEASARLAALLAQSPPPVE 198
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
Q+ YG LG AFQ++DDVLDY G+V+EMGKN+G+D R GK TLP+I+A QR T+ E+
Sbjct: 199 QSCADYGQALGTAFQVIDDVLDYDGDVSEMGKNLGDDLREGKTTLPLIIAMQRCTELERA 258
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G + + I+++ AL T A + Q+A D+L+ LP + + +L
Sbjct: 259 VIRRAIETGGTD--QMPQIIAIVQQTGALQATRDAAAAEAQRALDALQVLPQNPYSNALG 316
Query: 312 EVVDFCLQRLN 322
+ LQR +
Sbjct: 317 HLASQLLQRRS 327
>gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
43183]
gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
43183]
Length = 331
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 2/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + + V L+++ + SD ++ + K+L+ +GGKR RP L L + +
Sbjct: 14 ALAADMRERLAVVEELLVQSVTSDDPLLAEASKHLVEAGGKRFRPALVLLASHFGDPAAA 73
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A +E H ATL HDDV+D++ +RRG+ +A + W N ++L GD+L ++A ++
Sbjct: 74 GVVPAAVVVELTHLATLYHDDVMDEATVRRGEESANVRWTNTVAILTGDYLFARA-SDLL 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+A+ + L G++ + S E YL V+ KTA L + + + +L
Sbjct: 133 ADLGPQAVRIQARAFARLVRGQIAETSGPAPDADPLEHYLQVVADKTASLIAVSGHLGAL 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG V + + S +G+AFQL DD+LD E + GK G D R G TLP++
Sbjct: 193 LAGAPQQVVETITSACEKIGVAFQLSDDILDIASEFEQSGKTPGTDLREGIRTLPMLHVL 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + D E +A ++R + A+ + + A+ L LP
Sbjct: 253 SSTDPADARLRELLCQD-LTDEELHAEALALLRAHPAMDRAREDLRRWAEDARAELLTLP 311
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D + +L + D+ + R
Sbjct: 312 DIPARAALTGLCDYVVSRT 330
>gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
maltophilia K279a]
gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
maltophilia K279a]
Length = 332
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 129/322 (40%), Positives = 188/322 (58%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + +
Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGQA 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G H LA IEFIHT+TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F +
Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A +
Sbjct: 133 MVELERMPVMQILADATNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +GV + +QAL YGM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I
Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIH 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + DG S + + +R L + RA Y + A+ +L
Sbjct: 253 AMAHSDDATRERLRTIVQDGDASA--MPEVLAAIRSTGGLEYSRARAEEYAEAAERALDG 310
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L D+ +L + + +QR +
Sbjct: 311 LGDNDAVAALRGLARYAVQRSH 332
>gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
Length = 332
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + DME+VN +I + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 QLLAPIVDDMEQVNRVIRHSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSS 74
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 HRHTLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMV 134
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + ++
Sbjct: 135 GVGKMRVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAV 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG S A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 195 LAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLL 254
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT ++ + I G + F + + AL T A Q A D++ P
Sbjct: 255 EHGTPEQQALAREAIEQGGTD--RFETIFEAITRSGALDHTLECARQEAQAAADAIFSFP 312
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S +K SL+E+ + R +
Sbjct: 313 SSIFKNSLLELCSYSTTRKS 332
>gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 323
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 166/318 (52%), Gaps = 8/318 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDN 63
D+ + + + + +++ ++L +GGKR+RP + L A +
Sbjct: 10 PVEADLALLTDNLKNLVGARHKILYAAAEHLFGAGGKRIRPAIVLLLARATQPDQGITGR 69
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA E IHTA+L+HDDVVD+S+ RRG +GN+ +VL GDFL +Q+ +
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESSTRRGVDTVHSRFGNKVAVLAGDFLFAQSSWYLAN 129
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ E ++ LS V LAEGE+RQ + +T + YL KTA L + + + ++
Sbjct: 130 LDNLEVVKLLSRVIMDLAEGEIRQGLKHFDTTLTIDAYLEKSYYKTATLIANSAKAVGVL 189
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ V + + + L +G +LG+A+Q+VDD+LD+ + +GK G D +G T P + A
Sbjct: 190 SEVSDHMAENLYQFGRSLGLAYQVVDDILDFTSSDDVLGKPAGSDLLSGNLTAPALYAL- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E + K+ I E+ ++A ++ ++ + + A ++ + A + L LP
Sbjct: 249 ----EEVPYLKTLIERQFSEPEDFEQAIELVNNSQGIERSRVLAKTHVRHAVECLSNLPP 304
Query: 304 SSWKKSLMEVVDFCLQRL 321
S+ +++L ++ ++ L+RL
Sbjct: 305 SASRQALEDISEYVLRRL 322
>gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
Length = 336
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 167/323 (51%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + + D ++ ++++ GKR+RPML L A
Sbjct: 15 LSLIKKPIYSELEDFTKLFNQSLSHDSGLLSQALEHIRKRAGKRMRPMLILLIAKNFGDI 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 75 TPVSQNAAVGLELLHTASLVHDDVVDESGERRGQASVNATYNNKVAVLVGDYILSTALLY 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QLS +N +++E+ Y VIK KTA LF A +
Sbjct: 135 VSYTHSETIVRYLAQLGRTLSDGEILQLSNIQNREISEKVYYEVIKQKTAALFEACAGIG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A S +A K +G NLGI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 195 ALSAHASESDVEAAKKFGQNLGIIFQIRDDIFD-YYDSKEVGKPTGNDMSEGKLTLPVIY 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A + + + I+ + + +++ + + + + +A+ +
Sbjct: 254 ALNSTGDKAMMELAKKVKEHSITADEIAALVAFTKQHGGIEYADKCMWKFHAEAQKFIEE 313
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ +S K++L +DF ++R +
Sbjct: 314 KVLNSEIKQALQAYLDFVIERKS 336
>gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
Length = 344
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 113/321 (35%), Positives = 187/321 (58%), Gaps = 3/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ + D + ++ + + S V+++ +V +++I +GGKR+RP++TL A ML
Sbjct: 24 DIQSIVADDFDIMDKQVFGSLNSKVKLVMNVSQHVINAGGKRMRPLITLLCARMLNDEPS 83
Query: 63 N-HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF ++
Sbjct: 84 KQAMHLAAITEMLHTATLVHDDVIDESGQRRGKPTANATWDNATAVLVGDYLIARAFNLL 143
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + ++
Sbjct: 144 VGFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAA 203
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ Q QAL ++G + G AFQ+VDDVLDY G+ MGKN+G+D GKPTLP I A
Sbjct: 204 IL-QGQTQHLQALANFGQHFGNAFQIVDDVLDYSGDSALMGKNLGDDLAEGKPTLPTIKA 262
Query: 242 FQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K ++ + N ++ ++R + +L + RA + A+ +L
Sbjct: 263 LELLKDSNKEGYEQLRIAVQTGKTPNAEQLIALVRHSGSLDYCKQRALEETKLAQQALSS 322
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD+ +++ L ++ + RL
Sbjct: 323 LPDNRYRQGLYQLTELASARL 343
>gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 317
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++K+ + + I S +++ +L SGGKR+RP + ++ +
Sbjct: 1 MSKLN--INSEIKKIEKRLEQSIKSHDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEM 58
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ +A +E IH ATL+HDDV+D S RRG + W T++L G+FLL++
Sbjct: 59 NEDVYRVAVTLELIHMATLVHDDVIDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEH 118
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ +S + GEL Q N T +YL I KTA+L + EV
Sbjct: 119 ISNIEANRVHAVISRAIVEVCMGELYQFQDQFNGHQTITNYLRRINRKTALLIQLSTEVG 178
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+
Sbjct: 179 AITSGADAKTVHNLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHLTLPVLF 238
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
K E + + + E K +R + + ++ + Y KA +
Sbjct: 239 EM---RKNETFKQQIQQLNSETDHETFVKLIDQIRNSDVIAQSQAVSDKYLNKALHLIDE 295
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L + K +++ +R
Sbjct: 296 LDNEDSKSLFKKLIKKVGKR 315
>gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 342
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
LE L+ +E+V +L+ ++ + +V +LI +GGKRLRP+LTL A + R
Sbjct: 22 SALERRVLRGLEQVETRLLECAGEAEDPRLAEVAGHLIAAGGKRLRPLLTLLGAEFGDVR 81
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ V A E IHTA+L HDDV+D++ LR G + WGN +V G++LL++A +
Sbjct: 82 GEGGVEAAVVAELIHTASLHHDDVMDEALLRHGVSSVNARWGNTVAVRSGNWLLARAARL 141
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L G+LR+L + Y VI K+A L S +L +
Sbjct: 142 SASLAPEAIPLQAEASER-LVRGQLRELVGPDGAERRLSHYFAVISDKSASLISLSLRLG 200
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG V +AL +YG +LG+AFQ+ DD+LD ++GK G+D G LPV+L
Sbjct: 201 AVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSADLGKEQGKDLAVGVAGLPVLL 260
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + + ++A +++ + + A+ SL
Sbjct: 261 VLDDAWPGDEELRSLLNGAQAMRGQQHERALALLQRSGCMARARGIMDERLAAARASLGP 320
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP +K+L + +F R
Sbjct: 321 LPPGPARKALESLCEFVATRT 341
>gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
W23144]
gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
W23144]
Length = 332
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHV 65
+++KV + + I S + + D +L+ SGGKR+RP + + ++
Sbjct: 19 INNEIKKVEKRLEEAIISSDQTLQDASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTY 78
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E
Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKYLSEIS 138
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+S + GEL Q N + T +YL I KTA+L + +V ++ +
Sbjct: 139 DTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 198
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L
Sbjct: 199 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + K + + + I+R++ ++ ++ + Y KA + + L D
Sbjct: 256 RKNKTFKDKVSQLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDELEDGP 315
Query: 306 WKKSLMEVVDFCLQR 320
K+ +++ R
Sbjct: 316 NKELFRKLIKKMGSR 330
>gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 349
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 147/316 (46%), Gaps = 3/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
L DM V +L R S ++ Y + +GGKRLR L L A + Y
Sbjct: 35 RADLLNDMADVERQMLARTISRAPLLTAAGTYTVAAGGKRLRAALVLLCARLGMYDPSRA 94
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A AIE +H A+L+HDD+VD + RRG V W ++L+GD+ + A +
Sbjct: 95 LHPAIAIELLHAASLIHDDLVDHAGQRRGHVTVHSRWDADVALLLGDYFFALAANELAAE 154
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + A T+ EGEL ++ + L + E Y I KTAVLF AA + +A
Sbjct: 155 PDPRIIAFYTSAAQTMVEGELNPVTQIEPLAIAVEQYYRKIGCKTAVLFEAACKAGIAVA 214
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G ++ + L +G +LG+AFQ+VDDVLDY G+ +GK G D R G TLP++ A +
Sbjct: 215 GGDDAQIETLGRFGYDLGLAFQIVDDVLDYTGDETALGKPAGNDLREGTLTLPLMYAVAQ 274
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ N + + + + + A ++A L +
Sbjct: 275 S---RHPLLLAIANGQRPEPARVPQIVAAVIASGGADRAMEEARRLIERANQQLTLFAPT 331
Query: 305 SWKKSLMEVVDFCLQR 320
+++L+E+ +F L R
Sbjct: 332 PARRALIEIGEFVLNR 347
>gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
Length = 371
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 50 EIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 110 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 169
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++EGE+ QL + D I LF A V +
Sbjct: 170 ASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGA 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 230 IIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + ++ K +M ++ +T + A L +
Sbjct: 290 YNKLAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLLNKI 349
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L+R
Sbjct: 350 PVQNIYKDYLFSIIKFILERS 370
>gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
membrane protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
Length = 314
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 2 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 62 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 122 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQS 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 182 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 238
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 239 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHP 298
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 299 KSLLLSLTKKMGSR 312
>gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu50]
gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus N315]
gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu3]
gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. CF-Marseille]
gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus Mu50-omega]
gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9781]
gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9763]
gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9719]
gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9299]
gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A8115]
gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6300]
gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6224]
gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5948]
gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5937]
gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
A8117]
gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 132]
gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus MR1]
gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus N315]
gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu50]
gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu3]
gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9781]
gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9763]
gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9719]
gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9299]
gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A8115]
gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6300]
gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6224]
gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5948]
gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5937]
gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II
[Staphylococcus aureus subsp. aureus TW20]
gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
A8117]
gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
aureus 04-02981]
gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit
2) (Spore germination protein C3) [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus CGS03]
gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus CGS01]
gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus T0131]
gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21189]
gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21172]
Length = 319
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ + + + Y KA + +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 323
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 165/321 (51%), Gaps = 8/321 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D+ + + + + + ++ ++L +GGKR+RP + L + D
Sbjct: 7 LFTPVEADLRILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ +VL GDFL +Q+
Sbjct: 67 SLGHRRLAEITEMIHTASLVHDDVVDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LA GE++Q + +++ E YL KTA L + + + +
Sbjct: 127 LANLDNLEVVKLLSEVIMDLAAGEIQQGLNRFDTNLSIETYLKKSYYKTASLIANSAKAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ V + L +YG +LG+AFQ+VDD+LD+ G ++ +GK D ++G T PV+
Sbjct: 187 GILSNVSSESANNLYNYGKDLGLAFQIVDDILDFTGSMDTLGKPAASDLKSGNLTAPVLF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E+ + I +L++A ++ +++ + A + AK +
Sbjct: 247 AL-----EEQPSLEVLIEREFAQEGDLEQAVKLISDSQGIPRARELANHHANLAKQHIAD 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L S K++L+ + D+ L RL
Sbjct: 302 LGPSESKQALINMTDYVLSRL 322
>gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
Length = 371
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 50 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 110 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 169
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++ GE+ QL + D I LF A V +
Sbjct: 170 ASGSIKAMNVLAKASAIISAGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGA 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 230 IIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + ++ K +M ++ +T + A L +
Sbjct: 290 YNKLAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLLNKI 349
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L+R
Sbjct: 350 PVQNIYKDYLFSIIKFILERS 370
>gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum IPO1609]
gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum IPO1609]
Length = 338
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 122/282 (43%), Positives = 175/282 (62%), Gaps = 2/282 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++
Sbjct: 36 LLAPVAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNH 95
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA +EFIHTA LLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++
Sbjct: 96 HYELAAVVEFIHTAALLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQ 155
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ +++
Sbjct: 156 ADSMRVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVL 215
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I
Sbjct: 216 SGADAATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLS 275
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
GT+ ++ + I G E+ F ++ + AL T
Sbjct: 276 HGTEEQRALARQAIEQGGT--EHFDAIFDAIQASGALEYTRK 315
>gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 356
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 3/312 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E V + + S + + ++L+ +GGKR RP+L A + + V A +
Sbjct: 45 LEGVEAALRADVASADPFVTEAARHLLDAGGKRFRPLLVALGAQFGDPTREQVVPAAVVV 104
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D++ +RRG +A W N ++LVGD+L ++A + EA+
Sbjct: 105 ELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYLFARAAD-ISADLGTEAVR 163
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ L G++ + + +LHVI KT L + A + +G +
Sbjct: 164 LQARTFARLVHGQIAETVGPRPGVDPVAHHLHVIAEKTGSLIATAARFGGMFSGASPTHT 223
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QAL YG +G+AFQL DD+LD E GK G D R G PTLPV+ A +
Sbjct: 224 QALAGYGEAIGVAFQLSDDLLDISSEAERSGKTPGTDLREGVPTLPVLYALASDDADAAS 283
Query: 252 FWKSTIND-GKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ G ++ + L +A ++RE+ AL S ++A+ L LP + +
Sbjct: 284 VRLREVLAVGPLTDDELHAEALGLLRESPALKRARETVRSRAEEARAQLAPLPPGPARHA 343
Query: 310 LMEVVDFCLQRL 321
L + D R
Sbjct: 344 LESLCDQIADRT 355
>gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
Length = 347
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 181/321 (56%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ + D E ++ + + S V+++ V +++I +GGKR+RP+++L + + +
Sbjct: 29 QQIQSIIADDFEIMDKQVYGSLSSKVKLVMSVSQHVINAGGKRMRPLISLLCSRICNDQP 88
Query: 62 DN-HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ L E +HTATL+HDDV+D S +RRGK A W N T+VLVGD+L++++F +
Sbjct: 89 SQAAMHLGAITEMLHTATLVHDDVIDASGMRRGKPTANATWDNATAVLVGDYLIARSFNL 148
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S L+ S C +AEGE+ QL + TE DY+ +I KT+ LF A +
Sbjct: 149 LVGFGSLPLLQLFSDGTCDIAEGEVLQLQHQHDPKATEADYMKIIDGKTSRLFMMASQGV 208
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ K +G + G AFQ++DDVLD+ G+ +GKN+G+D GKPTLP+I
Sbjct: 209 AILENRPEYNDAFAK-FGQHFGNAFQIIDDVLDFVGDSEVLGKNVGDDIAEGKPTLPLIK 267
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + T + I G+++ + + I++ + AL +A + A+ ++
Sbjct: 268 ALEMTTGDTHEKLRIAIQTGQVNDTH--EIIEIVKTSGALAYCRDKAMQESEIARQAVLT 325
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPDS +++ L++++ QRL
Sbjct: 326 LPDSRYRQGLLDLITLASQRL 346
>gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
Length = 323
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 8/318 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---N 63
D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 10 PVENDLHLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDLEITSR 69
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H LA E IHTA+L+HDDVVD++ALRR ++ N+ +VL GDFL +Q+ +
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 129
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + ++ LS V AEGE+ Q + +T E YL KTA L + + + ++++
Sbjct: 130 LDNLQVVKLLSEVIRDFAEGEIFQGINRFDTSLTLEAYLDKSYYKTASLMANSSKSAAIL 189
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ V +L +YG LG+AFQ+VDD+LD+ +GK G D +G T P + A
Sbjct: 190 SDASAEVIDSLYNYGKYLGLAFQIVDDILDFTSPTEVLGKPSGSDLISGNITAPALFAM- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E + ++ I ++ KA I+ E++ + ++ A +GQ A L CL
Sbjct: 249 ----EETPYLETLIQREFSEEGDIDKALSIISESQGIERSQELAAYHGQLALKQLACLKP 304
Query: 304 SSWKKSLMEVVDFCLQRL 321
S + +SL ++VD+ L RL
Sbjct: 305 SPYSQSLTDIVDYVLSRL 322
>gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
Length = 328
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L++M+ + + +D M+ V +Y++ GK+LRPML L +A + +
Sbjct: 8 IDTIKQPILQEMQLFRETFAEALKTDNPMLETVHEYVLQKSGKQLRPMLVLLSAKLCGHV 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N V A A+E +HTA+L+HDDVVDD+ RRGK + W N+ ++L GD++LS+A
Sbjct: 68 NQNTVDGALALELLHTASLIHDDVVDDTLERRGKPSINARWTNKIAILSGDYILSKALVC 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+T S L++++ + L++GEL QLS + L+ +EE+YL +I+ KTA+LFS EV
Sbjct: 128 ATKTNSLPVLKSIANIGMQLSDGELLQLSNVQVLNASEENYLTIIRKKTALLFSTCTEVG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L L+++G LGI FQ+ DD+ D E +GK D R+GK TLP+I
Sbjct: 188 GLSVNAAEDTLVRLRNFGEYLGICFQIKDDIFD-YSENISIGKPTANDVRDGKITLPLIF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + EKN I + + EN++ +N + + +Y KA D L
Sbjct: 247 ALKNSEGDEKNKVVKIIEEKDFTPENIQTIIHFTHDNGGVAYAAKQMEAYKNKAIDELNG 306
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S K SL+ ++ R
Sbjct: 307 FAGSDVKTSLIRCAEYAANR 326
>gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase
gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
Length = 323
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAGGKRVRPAIVLLVSRATLLDQE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD++ LRR ++ N+ +VL GDFL +Q+
Sbjct: 66 LTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRVAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE+ Q + D E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKSYFKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++ V L YG +LG+AFQ+VDD+LD+ +GK G D +G T P +
Sbjct: 186 AGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPAL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + I +L++A ++ + + + A + Q A+ L
Sbjct: 246 FAM-----EKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQHLS 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
L S+ ++SL+E+VD+ L RL+
Sbjct: 301 VLEMSAPRESLLELVDYVLGRLH 323
>gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis]
gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis]
Length = 420
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 174/327 (53%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+K L ++ D++ +N + + ++ ++ + + +GGKR+RP L A
Sbjct: 98 VKNLFEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEV 157
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + ++L GDF+
Sbjct: 158 IGLKELTIKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKETVHQLYGTRVAILAGDFMF 217
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DV E+YL KTA L +
Sbjct: 218 AQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIA 277
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ +GV SV + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 278 ASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 337
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A ++ TK + G L +A ++++ R + + A A
Sbjct: 338 TAPVIFALEKETKLREIIESEFCETGS-----LDEAIELVKQCRGIEKAQELAKEKADLA 392
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L CLP +++ +L +V + L+R+
Sbjct: 393 IQNLDCLPRGAFRSALEGMVLYNLERI 419
>gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
CB1190]
gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
CB1190]
Length = 331
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 5/319 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
L +T +++V L+ + + +D + + +LI +GGKR RP+ TL +A + D
Sbjct: 16 LAAVTTDGLKRVEDLLHREVQADYHFVAETSLHLIDAGGKRFRPLFTLLSAQVGPNPDND 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + A +E +H ATL HDDV+D + +RRG +A W N ++L GDFL + A +V
Sbjct: 76 DVITAAAVVELVHLATLYHDDVMDSATMRRGAESANSRWDNTVAILTGDFLFAHASRLVA 135
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ L G++R+ D E YL V+ KT L + + +
Sbjct: 136 DLGPDAVRIIAET-FAELVTGQMRETRGPAEGDDPVEHYLRVVAEKTGSLIATSGRYGGM 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G ++L+ +G +G AFQ+ DDV+D ++ GK G D R G TLP++ A
Sbjct: 195 FSGCTPEQTESLRRFGATIGTAFQISDDVIDIASPSDDSGKTPGTDLREGVQTLPMLYA- 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + + +++A ++R L + Y + +++ L LP
Sbjct: 254 --LQEPRADRLRQLLARPISDDAEVEEALDLLRTGPGLDRSRETLARYAEASREQLAILP 311
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D + +L + + ++R
Sbjct: 312 DCAATSALATLTAYVVERT 330
>gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1]
gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanoculleus marisnigri JR1]
Length = 321
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 13/328 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M LED + E+++ ++ + + +L+ +GGKRLRP + + A + +
Sbjct: 1 MTTLEDYLEMNAERIDKVLHRYFGDVHGDLFRASAHLLLAGGKRLRPAVVILAADAVRKG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D+ + A ++E H TL+HDD++D A RRG +W T++L GD L ++AF
Sbjct: 61 SSDDLIPAALSLELTHNFTLIHDDIMDGDAARRGVPTVHTIWDEPTAILAGDVLYAKAFE 120
Query: 120 MVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ +++ A++ L+ + EG+ ++ K DV+E +YL ++ KT VL+
Sbjct: 121 FICFSEAADAAKIRAVKMLARTCTDICEGQSMDMAFEKRHDVSEVEYLEMVSKKTGVLYG 180
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + ++AG AL YG+N GIAFQ+ DD++D GK+ D R GK
Sbjct: 181 ASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDLLASSEASGKDRASDIREGKQ 240
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL I A ++G ++S + +RE + A A
Sbjct: 241 TLIAIRAREKGIDLAPY-------RRELSGAEIDDLIARLREAGVIDQVRAVAVERAGIA 293
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
K +L LPDS ++ L E+ DF + R N
Sbjct: 294 KQALSILPDSEERRLLEEIADFFIARGN 321
>gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
Length = 327
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 114/321 (35%), Positives = 184/321 (57%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 6 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ S +A+ L+ + ++EGE+ QL + D I
Sbjct: 126 ASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGA 185
Query: 183 IAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I Q + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAGQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + ++ K +M ++ + + A L +
Sbjct: 246 YNKLAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNEIVNYLSNLENAASKLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L+R
Sbjct: 306 PVQNIYKDYLFSIIKFILERS 326
>gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH60]
Length = 332
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 20 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 79
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 80 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 139
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 140 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQS 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 200 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSAEKKLGKPVGSDLLNGHITLPILLEM---R 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 257 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLISELPDGHP 316
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 317 KSLLLSLTKKMGSR 330
>gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 421
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 11/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEY 59
++ D++ +N + + ++ ++ + + +GGKR+RP L + L+
Sbjct: 104 EVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKD 163
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+
Sbjct: 164 LTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSW 223
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ E ++ +S V A GE++Q S + ++ E+YL KTA L +A+ +
Sbjct: 224 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKSFYKTASLIAASTKG 283
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ +GV +++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI
Sbjct: 284 AAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVI 343
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A ++ K + G L +A +++ + + A A +L+
Sbjct: 344 FALEKEPKLREIVESEFCEAGS-----LNEAIKLVKSCGGIEKAQDLAKQKADLAIQNLQ 398
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CLP S+++ +L ++V + L+R+
Sbjct: 399 CLPQSAFRLALEKMVKYNLERI 420
>gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]
Length = 421
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 11/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEY 59
++ D++ +N + + ++ ++ + + +GGKR+RP L + L+
Sbjct: 104 EVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKD 163
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+
Sbjct: 164 LTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSW 223
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ E ++ +S V A GE++Q S + ++ E+YL KTA L +A+ +
Sbjct: 224 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKSFYKTASLIAASTKG 283
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ +GV +++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI
Sbjct: 284 AAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVI 343
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A ++ K + G L +A +++ + + A A +L+
Sbjct: 344 FALEKEPKLREIVESEFCEAGS-----LNEAIKLVKSCGGIEKAQDLAKQKADLAIQNLQ 398
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CLP S+++ +L ++V + L+R+
Sbjct: 399 CLPQSAFRLALEKMVKYNLERI 420
>gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus MW2]
gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MSSA476]
gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus MW2]
gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MSSA476]
Length = 319
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 153/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + K I S ++ +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ K + +S + GEL Q N T +YL I KTA+L + E
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ + + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP+
Sbjct: 179 VGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPI 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L K K + ++ I+R++ ++ +++ + Y KA D +
Sbjct: 239 LLEM---RKNPDFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LPD K L+ + R
Sbjct: 296 SELPDGHPKSLLLSLTKKMGSR 317
>gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
Length = 371
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 50 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 110 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 169
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++EGE+ QL + D I LF A V +
Sbjct: 170 ASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGA 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 230 IIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPMIFL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + ++ K +M ++ +T + A L +
Sbjct: 290 YNKLAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLLNKI 349
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 350 PVQNIYKDYLFSIIKFILDRS 370
>gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus TCH130]
gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus TCH130]
gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 332
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 20 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 79
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 80 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 139
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 140 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQS 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 200 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 257 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHP 316
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 317 KSLLLSLTKKMGSR 330
>gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 11/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEY 59
++ D++ +N + + ++ ++ + + +GGKR+RP L + L+
Sbjct: 103 EVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKD 162
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+
Sbjct: 163 LTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSW 222
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ E ++ +S V A GE++Q S + ++ E+YL KTA L +A+ +
Sbjct: 223 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKSFYKTASLIAASTKG 282
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ +GV +++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI
Sbjct: 283 AAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVI 342
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A ++ K + G L +A +++ + + A A +L+
Sbjct: 343 FALEKEPKLREIVESEFCEAGS-----LNEAIKLVKSCGGIEKAQDLAKQKADLAIQNLQ 397
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
CLP S+++ +L ++V + L+R+
Sbjct: 398 CLPQSAFRLALEKMVKYNLERI 419
>gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 356
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
LE L+ +E+V +LK ++ + +V +LI +GGKRLRP+LTL A + R
Sbjct: 36 SALERRVLRGLEQVETRLLKCAGEAEDPRLAEVAGHLIAAGGKRLRPLLTLLGAEFGDVR 95
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + A E IHTA+L HDDV+D++ LR G + WGN +V G++LL++A +
Sbjct: 96 GEGVIEAAVVAELIHTASLHHDDVMDEALLRHGVSSVNARWGNTVAVRSGNWLLARAARL 155
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L G+LR+L + Y VI K+A L S +L +
Sbjct: 156 SASLAPEAIPLQAEASER-LVRGQLRELVGPDGAERRLSHYFAVISDKSASLISLSLRLG 214
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG V +AL +YG +LG+AFQ+ DD+LD E+GK G+D G LPV+L
Sbjct: 215 AVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSAELGKEQGKDLAVGVAGLPVLL 274
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + + ++ +++ + + A+ SL
Sbjct: 275 VLDDAWPGDEELRSLLSGAQAMRGQQHERTLALLQRSGCMARARGIMDERLAAARASLGP 334
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP +K+L + +F R
Sbjct: 335 LPPGPARKALESLCEFVATRT 355
>gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
str. F0039]
gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
str. F0039]
Length = 325
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + ++ V+ ++ GKR+RPML L A
Sbjct: 4 LSVIKKPITDELNHFIELFNTSLEHQDGLLSQVLMFIKQRSGKRMRPMLMLLVAKAFGRV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SEVTQHAAIGLELLHTASLVHDDVVDESGERRGQASVNAFYDNKVAVLVGDYILSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S + L+ + TL++GE+ QL N ++EE Y VIK KTA LF A E+
Sbjct: 124 VSFTSSDRIVSGLAELGRTLSDGEILQLENISNQTISEEAYYEVIKRKTAALFEACTEIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G + + +G++LG+AFQ+ DD+ DY N++GK G D GK TLPVI
Sbjct: 184 ALSVGASKDDVEQARLFGLHLGMAFQIRDDIFDYYES-NDIGKPTGNDMAEGKLTLPVIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A + G+++ E + + +EN + E + + KA +
Sbjct: 243 AVLATDNGAMKDLALKVKKGEVTPEEVAQLVAFTKENGGIEYAEAKMREFKNKAIGFIEE 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ D+ K++L +D+ ++R
Sbjct: 303 KIQDTDIKQALNAYLDYVIERK 324
>gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. Newman]
gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. Newman]
gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
Length = 322
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 10 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 69
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 70 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 130 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQS 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 190 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ + + + Y KA + + LPD
Sbjct: 247 KNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHP 306
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 307 KSLLLSLTKKMGSR 320
>gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
Length = 346
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + +++V L++ + + + + +L +GGKR RP+ T+ TA + +
Sbjct: 28 QLAATVREGLKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPKASD 87
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A +E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V
Sbjct: 88 PSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGDYLFAHASRLV 147
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ + E YL V+ KT L +A
Sbjct: 148 STLGPEAVRIIAET-FAELVTGQMRETIGLRGEQDPVEHYLKVVWEKTGSLIAACGRFGG 206
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ A
Sbjct: 207 TFSGADADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYA 266
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +++ +A ++ + + + + + +A+ L L
Sbjct: 267 LRDEGPDADRLRVLLDG-PVTNDDDVAEALALLERSPGMAAAKAKLEEFAVQARAQLAEL 325
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P +L+++VD+ ++R+
Sbjct: 326 PQGPANDALVKLVDYTIERV 345
>gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
Length = 322
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ L D+ V + + I S V+ + V ++L+ +GGKRLRP L L A +
Sbjct: 5 TMFALVEADLLAVEQALSEIIHSPVDQLTQVGRHLLQAGGKRLRPALYLLCAKSRQVETA 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + +A AIE IH ATL+HDDV+D++A RRG A WGN SVL GDFL ++AF V
Sbjct: 65 SLLPIAVAIEMIHMATLVHDDVIDNAATRRGLPTANSRWGNHVSVLSGDFLFAKAFSTVA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L L+ V C++ EGE+ Q+ + + + +EEDYL I KTA +A+ E+ L
Sbjct: 125 KHATPAMLRILTDVVCSMCEGEILQIRDTFSAEQSEEDYLVRIAKKTADFIAASCELGGL 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG+ AL+ YG +G+AFQ+ DD+LD ++GK G D R G TLPV+ A
Sbjct: 185 SAGLAPDEVAALRRYGHAVGMAFQITDDILDITASSAQLGKPAGNDLRQGIITLPVLYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCL 301
Q + + + + LK+ I++++ + Y Q+A+ +L L
Sbjct: 245 QHS--PRREELRRLVISRDMDEPGLKQGLAIVQDSGGIEYAYEYVSRYLQEARLALPAGL 302
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
D + +++L+ + DF R
Sbjct: 303 -DGAIRQTLIAIADFVGLRK 321
>gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa]
gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa]
Length = 355
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 34 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 93
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 94 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 153
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++EGE+ QL + D I LF A V +
Sbjct: 154 ASGSIKAMHVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGT 213
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 214 IIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFL 273
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + ++ K +M ++ +T + A L +
Sbjct: 274 YNKLAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLLNKI 333
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 334 PVQNIYKDYLFSIIKFMLDRS 354
>gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 328
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 111/321 (34%), Positives = 191/321 (59%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D+ D+ +N I K + + ++ D+ +LI SGGK++RP L ML Y
Sbjct: 10 SKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFIMCKMLNYS 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G++ V +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF
Sbjct: 70 GESRVNIAASVEFIHNATLLHDDVLDESKARHGVATANKIWGNKSSILVGDLLLTLAFRW 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE + L LS + L +GE++Q++ + + ++Y ++I KTA LFSA E +
Sbjct: 130 LIECGNLSVLSILSKASNLLVKGEIKQMTTRFDPNTIRKNYFNIIGEKTASLFSACSEAA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S+++G + + L+++G N G+AFQ++DDVLDY +GK +G+DF GK TLP I+
Sbjct: 190 SVVSGATSDETERLRNFGFNFGMAFQIIDDVLDYTANQCTLGKQLGKDFFEGKVTLPSII 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+++G+ E+ FW+ + + + + +A + + A+ + A Y A+ ++
Sbjct: 250 AYEKGSPSEQKFWEKSFSSARHN---FDQALQYINHHNAIHVSMEEAKHYINMAQSNIDT 306
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
DS +K +L++ ++ ++R
Sbjct: 307 FSDSLYKTALIDFLNASIERQ 327
>gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str.
7]
gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase
[Sulfolobus tokodaii str. 7]
Length = 329
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 165/317 (52%), Gaps = 10/317 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E VN I K + D++ + + YL +GGKRLRP++ +++A +L + L ++E
Sbjct: 12 ENVNINIEKYLKGDIQELYEASFYLFKAGGKRLRPLILVSSADLLGGDLNRAYLAGASVE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-------LVGDFLLSQAFCMVIETK 125
+HT TL+HDD++D+ RRG + WG ++ +L++AF + K
Sbjct: 72 VLHTFTLIHDDIMDEDTTRRGMPTVHVKWGIPMAILAGDLLHAKAFEILNEAFRGMSSNK 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
A E + ++EG+ + + V+EE+YL +IK KTA+LFS++ + LIA
Sbjct: 132 ITRAFEIFTKAIIIISEGQALDMQFEDKVTVSEEEYLDMIKRKTAMLFSSSAALGGLIAT 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
QAL YG+NLGI+FQ+VDD+L + E+GK + D R GK TL VI +
Sbjct: 192 DNEKEIQALADYGLNLGISFQIVDDILGLIADEKELGKPVYSDIREGKKTLLVIKTMKEA 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--D 303
T EK + + S + L A I+R+ +L +A Y +KA ++L + +
Sbjct: 252 TDEEKKILLKALGNKNASKDELITAAEIIRKY-SLEYAYNKAEEYARKAIEALESIDWKN 310
Query: 304 SSWKKSLMEVVDFCLQR 320
K+L + +F ++R
Sbjct: 311 DEAGKALKYLAEFTVKR 327
>gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 326
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 121/326 (37%), Positives = 193/326 (59%), Gaps = 6/326 (1%)
Query: 1 MKMLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ +D+++V N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M
Sbjct: 1 MNIIVK-IQQDLDEVTKLNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 59
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+Y+GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+
Sbjct: 60 DYKGDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANIIWGSKTSILVGDFLFSQS 119
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAA 176
F ++I + S +A+ L+ + ++EGE+ QL + + I LF A+
Sbjct: 120 FKLMIASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGAS 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
EV ++IA + V + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TL
Sbjct: 180 CEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWGNDKQVGKNIGDDFLEGKVTL 239
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P+I + + + + + ++ I K + + + +M ++ +T + +
Sbjct: 240 PLIFLYNKLEQDTQLWLENIIKCDKRTNDEFMQIRDLMVKHEIYNETINYLSNLENETNK 299
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQRL 321
L +P + +K L ++ F L R
Sbjct: 300 LLNKIPVQNIYKDYLFSIIRFILDRS 325
>gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 326
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L +DM +V+ +I R+ S V +I ++ +Y+I +GGKRLRP L L + L Y+G
Sbjct: 8 SAILALIAEDMHEVDKVIGLRLQSSVPLIGEIARYIISAGGKRLRPALLLLMSGALGYQG 67
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA IEFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDFL S+AF M+
Sbjct: 68 AQRFNLAAVIEFIHTATLLHDDVVDESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMM 127
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ ++ LS +AEGE++QL + + + E+ YL VI+SKTA LF A+ +++
Sbjct: 128 VDADDMRVMQILSEATNIIAEGEVQQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAA 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + +A YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A
Sbjct: 188 VLARAPAPIEEACAEYGKALGTAFQVIDDVLDYDGNSAEMGKNLGDDLREGKVTLPLIIA 247
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
QRG ++ ++ I G S++ L I+++ AL T A + Q+A +L L
Sbjct: 248 MQRGDAAQRQLIETAIQQG--SLDELPAILAIVKQTGALEATRAAAAAQAQEAIRALSAL 305
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P + + + L+++ L R
Sbjct: 306 PSNKYTEGLLQLASQLLDR 324
>gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
Length = 363
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 123/327 (37%), Positives = 196/327 (59%), Gaps = 7/327 (2%)
Query: 1 MKMLEDLTLKDME----KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M ++ +D++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M
Sbjct: 37 MNIIVK-IQQDLKDAVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKM 95
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+Y+GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ
Sbjct: 96 FDYKGDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQ 155
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSA 175
+F +++ + S +A+ L+ + ++EGE+ QL + D I LF A
Sbjct: 156 SFKLMVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGA 215
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A EV ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK T
Sbjct: 216 ACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQIGKNIGDDFLEGKVT 275
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP+I + + + ++ + ++ I K + ++ K +M ++ +T + +A
Sbjct: 276 LPLIFLYNKLEQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENEAS 335
Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQRL 321
L +P + +K L ++ F L R
Sbjct: 336 KLLNKIPVQNIYKDYLFSMIKFILDRS 362
>gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH70]
gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH70]
Length = 332
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 5/314 (1%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVL 66
+++KV + K I S ++ +L+ SGGKR+RP + ++ + +
Sbjct: 20 NNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQ 79
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K
Sbjct: 80 VAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKD 139
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ +S + GEL Q N T +YL I KTA+L + EV ++ +
Sbjct: 140 NRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQS 199
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L
Sbjct: 200 DKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEM---R 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K K + ++ I+R++ ++ +++ + Y KA D + LPD
Sbjct: 257 KNPDFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLISELPDGHP 316
Query: 307 KKSLMEVVDFCLQR 320
K L+ + R
Sbjct: 317 KSLLLSLTKKMGSR 330
>gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43]
Length = 330
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 178/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +
Sbjct: 14 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQ 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 74 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 133
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 134 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 194 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIE 253
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 254 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITLSGALDHTLECARQEAQAAATAISSFPS 311
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 312 SVFKESLLELCFYSTSRQS 330
>gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii]
Length = 403
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 12/324 (3%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--- 61
LT ++ +V I K + + + ++ YL GK RPM L +A Y
Sbjct: 84 TKLTESELSQVCTNIKKELNTSKHNLNEISHYLFDGKGKAFRPMTVLLSAKACNYHSGLS 143
Query: 62 ----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A E IHTA+L+HDDV+D + RRGK A +WG + ++LVGDF+LS++
Sbjct: 144 TQVTQSQREVAMIAEMIHTASLIHDDVIDAADTRRGKAAVNEIWGQKNAILVGDFILSKS 203
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ ++E + +S L GE QL ++ + YL KTA L + +
Sbjct: 204 SALLARIGNKEVVIVISQAIDDLVRGEFMQLGSKEDENERFAHYLQKTYKKTASLIANSC 263
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ S+++G ++ + YG N+GIAFQLVDD+LDY MGK D + G T P
Sbjct: 264 KAVSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLDYISSDTVMGKPTSTDLKLGLATSP 323
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A Q+ + I +++KA ++ E + T Y A Y +A
Sbjct: 324 VLFACQQYPELNA-----LIMRRFSEPGDVEKARRLVAETDGIQQTRYLAQQYCNEAIKQ 378
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S +K+L+ + L R+
Sbjct: 379 ISGLAESPARKALVTLTHKILNRI 402
>gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
Length = 324
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKTPIEAELEDFKALFDTPLSDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ V+ N+ SVL GD+LL+ +
Sbjct: 64 TPATLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAVFNNKVSVLAGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+T + E + +S + LAEGEL QLS N +EE Y VI+ KTA LF+A E +
Sbjct: 124 AEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L V + G +GI FQ+ DD+ DY + ++GK G D GK TLP +
Sbjct: 184 ALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKKIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +G + + + + ++N + Y +KA D L
Sbjct: 243 ALNTTKDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRMIEQYKKKAFDLLAT 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ +L +D+ + R
Sbjct: 303 LPDSNICLALRTYLDYVVDR 322
>gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314]
gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314]
gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
Length = 350
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L M++V +LK + + + D V +L +GGKR RPM L +
Sbjct: 33 ALTARIDNAMQQVEDRLLKELSIGEDFLVDKVTHLARAGGKRFRPMFALLASEFGAKPLS 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A +E H ATL HDDV+D++ +RRG +A W N ++L GD LL+ A ++
Sbjct: 93 DNVIKAAVVVEITHLATLYHDDVMDEATMRRGVPSANSRWDNSVAILAGDILLAHASRIM 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + V Y+ VI+ KTAVL ++A + S
Sbjct: 153 SQLGMETVAHFAETFGELVTGQMRETVGARGGDPVD--HYMKVIREKTAVLIASAGFLGS 210
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ A ALK +G +G+ FQ+VDD++D E E GK G D R G TLPV+ A
Sbjct: 211 MHADATPEHVDALKKFGAAVGMIFQIVDDIIDIFSETAESGKTPGTDLREGVFTLPVLYA 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T+ + + + +A ++ ++ + + Y A L L
Sbjct: 271 MREQTEVGAQLREILTG-PIEDDDTVDRALELLAQSGGRREALADVHHYMAIANAELDRL 329
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+S K +L + F +QR+
Sbjct: 330 PDNSVKDALRNLAIFTVQRV 349
>gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
Length = 334
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 104/323 (32%), Positives = 170/323 (52%), Gaps = 6/323 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ DL D+ + + S VE++ D+ +YLI GGKR+RPM+ L +A + +
Sbjct: 11 EVFDLLRDDLAAIESEFAHQSDSPVEVVTDIAQYLIAGGGKRIRPMMLLLSARAVGCESE 70
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ L +E +HTATL+HDD++D+++ RRG+ ++ WGN VL GD+L Q+F +
Sbjct: 71 ARIRLGAVVEMLHTATLVHDDIIDEASTRRGRPSSNTTWGNAKCVLAGDWLYMQSFQTAL 130
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE---- 178
++ L+ L + + EGEL Q+ + EE+Y +I KTA LF +++
Sbjct: 131 AERNFRILDLLISLTQQMVEGELLQMEKLG-HLINEEEYFDLIYRKTACLFKVSMQLGAV 189
Query: 179 -VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+AL YG NLG+AFQ+VDDVLD + + +GK D R GK TL
Sbjct: 190 IAVPPTTPNAAPFEEALGEYGRNLGLAFQIVDDVLDLTAQDDVLGKPTASDLREGKATLA 249
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VI A +RGT ++ ++ + D + I++ + +L A +Y + A+ S
Sbjct: 250 VIHALERGTGADREAIRTVLADRSFARVAHADILEILQRHESLAYAMDTACAYAEAARQS 309
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
+ LP+S +K++L+ V F R
Sbjct: 310 IADLPESDYKRALLWVPGFVTTR 332
>gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP]
gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP]
Length = 342
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 16/306 (5%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90
+ ++ +GGKR+RP + L A + + A AIE +HT TL+HDD++D
Sbjct: 35 YEATRHYPLAGGKRVRPFVVLTAAEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDET 94
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR---- 146
RRG+ VWG ++L GD + S F + + A A E+
Sbjct: 95 RRGRATVHKVWGINMAILAGDLMYSVVFDAATKAPVSAEKIVEIVRAIARAGIEICEGQA 154
Query: 147 -QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L VT E+YL +I KTA LF A+ ++ +I QAL YG N+G+AF
Sbjct: 155 LDLEFETRDTVTIEEYLKMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGMAF 214
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND------ 259
Q+ DDVLD + ++GK +G D R GK TL V FQ ++ +K +
Sbjct: 215 QIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFQHASEEDKAEFLKVFGKYAGDVK 274
Query: 260 -----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ E + K ++++ ++ A + ++AK++L+ LP+S +K+L +
Sbjct: 275 GKGIIEEDIREEVAKVIELLKKYGSIDYASRFAKNLVKEAKEALKVLPESEARKNLELLA 334
Query: 315 DFCLQR 320
DF ++R
Sbjct: 335 DFIVER 340
>gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
Length = 331
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEAKDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLAKKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVYNETAEKALKYLAQFTIER 329
>gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus
shibatae B12]
Length = 331
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 101/328 (30%), Positives = 171/328 (52%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGNTFYKAFSVFINSIEIISEGQAMDMSFENRVDVTEEEYMQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDQKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI T EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEATDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLAKKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVYNETAEKALKYLAQFTIER 329
>gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
Length = 331
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEAKDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLARKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVYNETAEKALKYLAQFTIER 329
>gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 325
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +L +M + I + I E + ++LI +GGK++RP L L ++ +
Sbjct: 5 MDILRKY--SEMA--DERIRESISDITPETLLRASEHLITAGGKKIRPSLALLSSEAVGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +A AIE IHT +L+HDD++DD +RRG+ A ++WG ++L GD L S+AF
Sbjct: 61 DPGDAAGVAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFE 120
Query: 120 MVIETKSQEALEA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
VI E ++ + + EG+ + + LDVTEE+Y+ +I KTA L +A
Sbjct: 121 AVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGFEERLDVTEEEYMEMIYKKTAALIAA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++ G AL+ YG +G+AFQ+ DD LD + +GK +G D GK T
Sbjct: 181 ATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMT 240
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L V+ A +R +++++ S + G + + +A I A A + + AK
Sbjct: 241 LMVVKALERASEKDRERLISILGSG--DEKLVAEAIEIFERYGATEYAHAVALDHVRMAK 298
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L L +S +++L + DF L+R +
Sbjct: 299 ERLEVLEESDAREALAMIADFVLEREH 325
>gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A]
Length = 331
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEAKDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLAKKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVYNETAEKALKYLAQFTIER 329
>gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum]
Length = 398
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 92/327 (28%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + ++ D+ +N + + ++ ++ + + +GGKR+RP L +
Sbjct: 76 LTNVFEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEM 135
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L+ NH LA IE IHTA+L+HDDV+D+S RRGK ++G + +VL GDF+
Sbjct: 136 SGLKELTTNHRRLAEIIEMIHTASLIHDDVLDESDTRRGKETIHQLYGTRVAVLAGDFMF 195
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DV ++YL KTA L +
Sbjct: 196 AQSSWYLANLENLEVIKLISQVIKDFASGEIKQASNLFDCDVGLDEYLLKSYYKTASLIA 255
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +++ + V + + + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 256 ASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILDFTQSAAQLGKPAGSDLAKGNL 315
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PV+ A ++ ++ I +L++A +++ + + A A
Sbjct: 316 TAPVLFAL-----EKEPNLRNIIESEFHDAGSLEEAINLVKSCGGIQRAQDLAKEKADLA 370
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L E+V + L+R+
Sbjct: 371 MQNLKCLPSSPFQAALEEIVKYNLERI 397
>gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4]
Length = 331
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEAKDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLAKKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVYNETAEKALKYLAQFTIER 329
>gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
Length = 325
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 85/319 (26%), Positives = 161/319 (50%), Gaps = 3/319 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + +V + I S+ +I + +++ SGGKR+RPM L + + + ++
Sbjct: 7 KAFLQPYIYEVEQRLQTLIQSESTVITNASMHILNSGGKRVRPMFVLLSGFLAKGEKEHL 66
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A ++E IH A+L+HDD +D+S RRG + + + T++ G FLL++A + E
Sbjct: 67 IRTAVSLELIHMASLVHDDYIDNSDKRRGNTSVHMAFNKDTAIRTGHFLLARALENIAEI 126
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + S + GE Q++ N +T +YL I KTA+L A+ + ++
Sbjct: 127 NDSQYHQIFSKTILEVCFGEFDQMADRFNYPITFTEYLRRINRKTAILIEASCHLGAVST 186
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + +K +G +G+++Q++DD+LDY + +GK +G D RNG T P+I A
Sbjct: 187 NLDSYTTYHVKQFGHCIGMSYQIIDDILDYTSDEVTLGKPVGSDIRNGHVTYPLIAAIDV 246
Query: 245 GTKREKNFWKSTINDGKISVEN--LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ E + ++ + S + ++ + +E + YG KAK L LP
Sbjct: 247 LNQHEDYRLEQSVMQLQQSSDEAVFDYIIEQVKRYG-VHSSEVLSRKYGDKAKFHLDQLP 305
Query: 303 DSSWKKSLMEVVDFCLQRL 321
DS+ K L+++ + L+R+
Sbjct: 306 DSNIKSYLIQIHEKMLKRI 324
>gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
Length = 331
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 10/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VNF I + S+V + + +L +GGKRLRP++ ++++ ++
Sbjct: 3 DELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDR 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H TL+HDD++D LRRG + WG ++L GD+L ++AF +
Sbjct: 63 QRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122
Query: 122 IE-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E +A ++EG+ +S +DVTEE+Y+ +IK KTA+LFS
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFS 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + +I + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK
Sbjct: 183 CSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKK 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ VI EK ST+ + + ++L++A I+R+ +L A Y A
Sbjct: 243 TILVIKTLSEAKDDEKKILVSTLGNREAKKDDLERASEIIRKY-SLQYAYNLAKKYSDLA 301
Query: 295 KDSLRCLP--DSSWKKSLMEVVDFCLQR 320
+ LR +P + + +K+L + F ++R
Sbjct: 302 LEHLRKIPVCNETAEKALKYLAQFTIER 329
>gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
HTCC2181]
gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
HTCC2181]
Length = 321
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 116/322 (36%), Positives = 177/322 (54%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+ +VN +I K + S++ ++ + ++I SGGKR+RP + L A +
Sbjct: 2 LSTILSPISNDLNEVNNVIRKSLFSEIPIVNQISNHIINSGGKRMRPSIHLLFAKLTGEI 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+H +A IEFIHTATLLHDDVVD S RR K A ++GN +SVLVGDF+ S++F M
Sbjct: 62 NTSHHAMAAIIEFIHTATLLHDDVVDQSTQRRSKKTANALFGNSSSVLVGDFIYSRSFQM 121
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + E +E L+ ++EGE+ QL +KN D++E DY VI KTA LF + ++
Sbjct: 122 MTKINNMEVMEILADATNAISEGEILQLLNTKNPDLSENDYFQVIGFKTAKLFESCGSLA 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ V ++ L G GI FQL DD+LDY G+ EMGKNIG+D GK TLP+I
Sbjct: 182 GVLNEVDQEKQKDLAKLGNIFGIMFQLTDDILDYSGKEIEMGKNIGDDLTEGKVTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A Q G+ + K I G I+ L I+ + A+ E + + L
Sbjct: 242 AMQNGSDTQGKLIKEAIKIGDIN--RLPDIIQILSDTNAIATVEKHLVQKVIEVNEVLGR 299
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+K+L + ++ L+R +
Sbjct: 300 FDKGEARKTLSSLANYILERKS 321
>gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
NaphS2]
gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
NaphS2]
Length = 325
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 168/316 (53%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L E++N + K S V + ++ Y + GKRLRP++ + + + Y G++
Sbjct: 9 ALFEAHFERINRELNKVFDSRVPLAKEIGTYALLGEGKRLRPLIFVLSCQLCGYGGEDLY 68
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
L+ E+IHT++LLHDDV+D++ +RR K ++ +WGNQ +VL GDFL S+A + +
Sbjct: 69 PLSTVFEYIHTSSLLHDDVLDNAEIRRRKPSSNQIWGNQAAVLEGDFLFSKALSIAVSAN 128
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + +L+ ++EG++ +L + +L+ + Y+ +I +KTAVL SAA ++++G
Sbjct: 129 SVPFISSLTKATMRMSEGQILELVHTDDLETGRDTYMQIINAKTAVLISAACGCGAIVSG 188
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ +L +G ++GIAFQLVDD+LDY GK +G+D GK TLP+I +
Sbjct: 189 SSPEIEASLTRFGRSVGIAFQLVDDLLDYTSSEEIFGKPVGKDLLEGKITLPLIYTLAQL 248
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ EK + K + +R+ L A Y A L+ DS+
Sbjct: 249 EQNEKKRFSEFFEHRKTDKAAYEALLDRVRKGGVLEKIREEAQGYVDDAAVCLKTFQDSA 308
Query: 306 WKKSLMEVVDFCLQRL 321
K +L+ ++ + + R
Sbjct: 309 VKTNLLTLIQYIIDRT 324
>gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
Length = 323
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 158/321 (49%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ D+ + SD ++ + Y++ GK++RPM A +
Sbjct: 4 INQIKLPIAADIAAFEEKFKASMHSDAPLLDRITHYIVKRKGKQVRPMFVFFAAKLCGGI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTATL+HDDVVD++ RRG + +W N+ +VLVGD+LL++ +
Sbjct: 64 IESTHRGAALVELLHTATLVHDDVVDNAYERRGFFSINALWKNKIAVLVGDYLLAKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ +S ++EGEL Q+ + +D++EE Y VI+ KTA L ++
Sbjct: 124 SVHNSEFRLLQIVSEAVKQMSEGELLQIEKVRRMDISEELYFDVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + + ++ +G +GIAFQ+ DD D+ +++GK +G D + K TLP+I
Sbjct: 184 AASAGADEATIEKMRLFGEKVGIAFQIKDDTFDFGT--DDVGKPLGIDIKEKKVTLPLIY 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R K EK + + + + +++ + + + + Y Q+A D L
Sbjct: 242 ALNRAEKSEKKRIINLVKNHQDDPVKIQEIIDFVNARQGVHYANEKMIQYQQEAFDILYS 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ L ++V + +R
Sbjct: 302 FEPGDARTGLEQLVRYTTERK 322
>gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
Length = 325
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 166/323 (51%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ +++ L + + D ++ V+ ++ GGKR+RP+L L A
Sbjct: 4 LSLIKQPISAELDDFISLFNQSLSHDNGLLAQVLMHIRQRGGKRMRPILILLMAKNFGCV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A
Sbjct: 64 SSVTQHAAVGLELLHTASLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +T S+ + LS + TL++GE+ QL+ + ++E Y +IK KTA LF + +
Sbjct: 124 VSKTHSEVIVRRLSELGRTLSDGEILQLTNIQKEAISETAYYEIIKRKTAALFESCAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + +A + +G NLGI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 184 AESAGASDDDVEAARLFGQNLGIIFQIRDDIFD-YYDSKEIGKPTGNDMLEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR- 299
A + E + ++ + + +E+ + E + + + +
Sbjct: 243 ALKSTGNAEMMTLARKVKAREVKQSEINQLVAFTKESGGIEYAEQQMWKFHAACMQFIDE 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ DS+ K +L +DF ++R +
Sbjct: 303 KVGDSTIKAALKAYLDFVIERKS 325
>gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius HKU10-03]
gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius HKU10-03]
gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius ED99]
Length = 318
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 161/323 (49%), Gaps = 6/323 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L ++++K+ + + I S+ + +L+ SGGKR+RP+ + ++ +
Sbjct: 1 MSKLN--LNQEIKKIENTLKQLIQSEDSTLQSAADHLLSSGGKRVRPLFVILSSYVGENP 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL++A
Sbjct: 59 ANDAAYRVATALELIHMATLVHDDVIDFSDKRRGKLTIEKKWDQPTAILTGNFLLARALE 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + LS + GEL Q + + +YL I KTA+L A EV
Sbjct: 119 HLSYIQDSRIHQTLSHAIIEVCRGELFQFQDQFRAEQSITNYLRRINRKTALLMQLATEV 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + + + ++ G ++G++FQ+VDDVLD+ ++GK +G D RNG TLPV+
Sbjct: 179 GAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLDFTSTEKKLGKPVGSDLRNGHMTLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA ++ + ++ T E+ +R++ A+ + + Y KA L
Sbjct: 239 LAMKQNPQLKEKVATLTPGSPT---EDFDWCIEQIRQSEAISQSLNVSQKYLDKASTLLE 295
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP + K +++ R+N
Sbjct: 296 TLPKNEIKPHFRKLIKRLQSRMN 318
>gi|223943155|gb|ACN25661.1| unknown [Zea mays]
Length = 413
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 98/327 (29%), Positives = 174/327 (53%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ +D+ +N + + ++ ++ + + +GGKRLRP L +
Sbjct: 91 VSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 150
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 151 AGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 210
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +
Sbjct: 211 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIA 270
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +S+ +GV ++ + + +YG NLG++FQ+VDD+LD+ ++GK D G
Sbjct: 271 ASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAASDLAKGNL 330
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A Q + + I+ ++L A ++ + + A G A
Sbjct: 331 TAPVIFALQSEPEL-----REIIDSEFSDTDSLATAIELVHRSGGIRRAHELAREKGDLA 385
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L ++V++ L+R+
Sbjct: 386 IQNLQCLPRSDFRSALEKMVEYNLERI 412
>gi|194703306|gb|ACF85737.1| unknown [Zea mays]
gi|194703680|gb|ACF85924.1| unknown [Zea mays]
gi|194704700|gb|ACF86434.1| unknown [Zea mays]
gi|223946673|gb|ACN27420.1| unknown [Zea mays]
Length = 424
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 98/327 (29%), Positives = 174/327 (53%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ +D+ +N + + ++ ++ + + +GGKRLRP L +
Sbjct: 102 VSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 161
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 162 AGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 221
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +
Sbjct: 222 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIA 281
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ + +S+ +GV ++ + + +YG NLG++FQ+VDD+LD+ ++GK D G
Sbjct: 282 ASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAASDLAKGNL 341
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A Q + + I+ ++L A ++ + + A G A
Sbjct: 342 TAPVIFALQSEPEL-----REIIDSEFSDTDSLATAIELVHRSGGIRRAHELAREKGDLA 396
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L ++V++ L+R+
Sbjct: 397 IQNLQCLPRSDFRSALEKMVEYNLERI 423
>gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL2A]
gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str.
NATL2A]
Length = 323
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 8/305 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHT 76
I + ++ ++L +GGKRLRP + L + L + H LA E IHT
Sbjct: 23 RSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHT 82
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDDVVD++ RRG + + +VL GDFL +QA + ++ E ++ LS V
Sbjct: 83 ASLVHDDVVDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRV 142
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
LAEGE++Q + + E YL KTA L + + + +++ V +L
Sbjct: 143 IMDLAEGEIKQGLNRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSNVDQESLNSLYF 202
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G LG+AFQ+VDD+LD+ G ++GK D ++G T PV A + +
Sbjct: 203 FGRQLGLAFQVVDDILDFTGNDEQLGKPAASDLQSGYLTAPVFYALEENPSLSE-----L 257
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
IN ++L +A ++R++ A+ + A + ++KDS+ LPDS KK+L+E+ +F
Sbjct: 258 INGKFSQKDDLDQALSLVRDSSAIKKSRELAEQFASESKDSISWLPDSPSKKALLELPEF 317
Query: 317 CLQRL 321
+ RL
Sbjct: 318 VISRL 322
>gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
Length = 325
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 159/322 (49%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ + ++ ++L + + ++ + ++ GKR+RPML L A
Sbjct: 4 LSLIQQPIVDELNDFDYLYNESLSHGDGLLSQALSHIRQRKGKRMRPMLILLIAKNFNGV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TSIAQHAAVGLELLHTASLVHDDVVDESGERRGQASVNATYDNKVAVLVGDYILSTALLQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ ++ L+ + TL+ GE+ QLS +N D++EE Y VIK KTA LF + +
Sbjct: 124 VSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEEVYYQVIKQKTAALFESCAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A + +G LGI FQ+ DD+ DY E+GK G D GK TLPVI
Sbjct: 184 AQAGKATPEEVEAAREFGQTLGIIFQIRDDIFDYFES-KEIGKPTGNDMAEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + D ++ + + + ++ + E R Q+A +
Sbjct: 243 ALNSTHDAAMLRLAHKVKDNTVTPDEIAQLVAFTKQQGGIEYAEQRMGELHQQALAFIDK 302
Query: 301 -LPDSSWKKSLMEVVDFCLQRL 321
+ D+ K +L +D+ ++R
Sbjct: 303 HVIDADIKNALQAYIDYVVKRT 324
>gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330]
Length = 324
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 124/317 (39%), Positives = 190/317 (59%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D+ +VN ++ + + SDV +I + Y+I +GGKRLRP+LT+ + L Y D
Sbjct: 8 FQQNLEHDLSRVNVVVNQAVQSDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYDDDK 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++
Sbjct: 68 LYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V +++
Sbjct: 128 SGSLKILEVMADATNIIAEGEVMQLMNIGNVDITEAQYLQVIQYKTAKLFEAAAQVGAIL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG QALK +GM++G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I Q
Sbjct: 188 AGATAEQEQALKDFGMHMGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQ 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RG + + ++ + + K + ++ AL +A A D L LP
Sbjct: 248 RGNVQAASDVRAALQNADRDY--FDKIHAHVTQSDALAYCIEQAKVAVDNAIDCLNALPQ 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+ ++ ++ + + R
Sbjct: 306 NEVTAAMRQMAELSVAR 322
>gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 349
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
L DM +V +L R S ++ Y + +GGKRLR L L +A + Y
Sbjct: 35 RADLLSDMAEVERQMLARTASRSPLLTAAGTYTVAAGGKRLRAALVLLSARLGAYDPGRA 94
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A AIE +H A+L+HDD+VD + RRG V W ++L+GD+L + A +
Sbjct: 95 LHPAIAIELLHAASLIHDDLVDHAGQRRGHVTVHTRWDADVALLLGDYLFALAANELAAE 154
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + A T+ EGEL ++ + L E Y I KTAVLF AA + +A
Sbjct: 155 PDPRIIAFYTSAAQTMVEGELNPVTHVEPLATAVEQYYRKIGRKTAVLFEAACKAGIAVA 214
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G AL +G +LG+AFQ+VDDVLDY G+ +GK G D R G TLP++ A +
Sbjct: 215 GGDEEQIDALGRFGYDLGLAFQIVDDVLDYTGDETALGKPAGNDLREGTLTLPLMYAVAQ 274
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
++ N + + + + + A +++ L +
Sbjct: 275 SRNP---LLRALANGQRPEPSRVPQIVAAVIASGGADRAMEEARMLVERSYQHLASFAAT 331
Query: 305 SWKKSLMEVVDFCLQRLN 322
+++L E+ +F L R +
Sbjct: 332 PARRALAEIGEFVLNRKS 349
>gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
3_1_12]
gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
Length = 324
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 169/320 (52%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + S ++ +V+ ++ GK +RP+L L A +
Sbjct: 4 LSLIKSPITTELEDFKNLFDSSLSSSNLLLNNVIAHIRQRNGKMMRPILVLLVAKLYGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VLVGDFLL+ +
Sbjct: 64 KPATLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLVGDFLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T++ + + ++ + LAEGE+ QLS N + +E Y VI+ KTA LF+A + +
Sbjct: 124 AERTRNHDIIGVVACLGQDLAEGEILQLSNVSNREYSETIYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + + + +G N+GI FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVEITDEKAEFARLFGENIGICFQIKDDIFDYFES-KEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ DG +V+ + + +++N + Y Y ++A D LR
Sbjct: 243 VLNTTNDAWAQEMALKVKDGTATVDEIARLIEFIKQNGGIEYAIKVMYEYKERALDLLRM 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ K +L+ VD+ + R
Sbjct: 303 LPDSAVKTALITYVDYVVDR 322
>gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus]
Length = 325
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 85/319 (26%), Positives = 161/319 (50%), Gaps = 3/319 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + +V + + I SD E I +++ SGGKR+RPM L + + + + D+
Sbjct: 7 KAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDL 66
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A ++E +H A+L+HDD +D+S +RRG + + + T++ G FLL++A +
Sbjct: 67 IRTAVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATI 126
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + + S + GE Q++ N V+ YL I KTA+L A+ + +L +
Sbjct: 127 NNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSS 186
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ +K +G +G+++Q++DD+LDY + +GK +G D RNG T P++ A
Sbjct: 187 QLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIAN 246
Query: 245 GTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+++ + ++ + E + +++ + E + YG KAK L L
Sbjct: 247 LKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYG-IEPAELLSRKYGDKAKYHLSQLQ 305
Query: 303 DSSWKKSLMEVVDFCLQRL 321
DS+ K L E+ + L+R+
Sbjct: 306 DSNIKDYLEEIHEKMLKRV 324
>gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
Length = 329
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 158/325 (48%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ + ++E ++ + ++ ++ E++ D+++Y + + GK +RPML + +A M
Sbjct: 4 LDDIRKPVTAELEALDEFVDRQFTAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAPV 63
Query: 57 -LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
G L A +E IH A+L+HDDV+D++ +RRGK +A W + +V++GD++L+
Sbjct: 64 KGAAAGRRACLAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYILA 123
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + +++ + + + L EGE+ Q + N +T + YL +I KTA L
Sbjct: 124 KNMNIGLQSGQFDLVTHVCGSMAALCEGEVLQDECAANSTMTRQAYLDIIYKKTASLLGV 183
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ +L G ++ +G +G+AFQ+ DD+LDY GK D R GK T
Sbjct: 184 SASAGALAVGATRDRVATMRRFGEAVGMAFQIQDDILDYTPTA-HTGKPANNDLREGKIT 242
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP++ R + + ++ S E ++ + L Y +A
Sbjct: 243 LPLLSVLDRASDSRRRELLERLSRCHESDEEVEYLRSTVENEGGLSFAAEVMQGYIARAV 302
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ L PDS ++ +L+ + + +R
Sbjct: 303 EMLSDYPDSEYRSALVNLCAYIAER 327
>gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus]
Length = 336
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GGKR RP+L + +A +
Sbjct: 14 QALEADVQAGLVAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++A+RRG +A W N +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLSGKTGSLVAVSSRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V + L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVEVLTQYGERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLAEDLALCELLDSDLSDDARHAEALRLLRAHPALEQARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+E+ + R
Sbjct: 313 APLRECDAKAALVELCVTVVHR 334
>gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
Length = 344
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 130/319 (40%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L DM +V+ +I R+ S V +I ++ +Y+I +GGKRLRP L L + L Y+
Sbjct: 26 SAILALIADDMHEVDKVIGLRLQSSVPLIGEIARYIISAGGKRLRPALLLLMSGALGYQE 85
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA IEFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDFL S+AF M+
Sbjct: 86 AQRFNLAAVIEFIHTATLLHDDVVDESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMM 145
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ ++ LS +AEGE++QL + + + E+ YL VI+SKTA LF A+ +++
Sbjct: 146 VDADDMRVMQILSEATNIIAEGEVQQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A ++ +A YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A
Sbjct: 206 VLARAPAAIEEACAEYGKALGTAFQVIDDVLDYDGNSAEMGKNLGDDLREGKVTLPLIIA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
QRG ++ ++ I G S++ L I++ AL T A + Q+A +L L
Sbjct: 266 MQRGDAAQRQLIETAIQQG--SLDELPAILAIVKATGALEATRAAAAAQAQEAIRALSAL 323
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P + + + L+++ L R
Sbjct: 324 PSNKYTEGLLQLASQLLDR 342
>gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 336
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + V +L+ S+V I + ++L+ +GG+R RP+L + +A +
Sbjct: 14 QALEADVQAGLVAVEEGLLEATKSEVPFITEAAQHLVRAGGERFRPLLVMLSAQFGDPYA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E H ATL HDDV+D++A+RRG +A W N +VL GDFL ++A ++
Sbjct: 74 PGIVPSAVVVELTHLATLYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARASQIL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L G++ + + ++ + YL V+ KT L + + +
Sbjct: 134 ADLGPEAVRVQALAFER-LVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGA 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++G +V L YG LG+AFQL DDVLD + +E GK G D R G PTLPV+
Sbjct: 193 MMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRL 252
Query: 242 FQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + +A ++R + AL Y ++A+ +L
Sbjct: 253 RERAARLGLAEDLALCELLDSDLSDDARHAEALRLLRAHPALEQARRDTVRYAEEARAAL 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +L+E+ D + R
Sbjct: 313 APLRECDAKAALVELCDAVVHR 334
>gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
Length = 326
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 159/314 (50%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K+M+ + +++ I E I ++K +GGKRLRP L L + L +
Sbjct: 15 ISKEMKLIENELMRVIEEGDESIRGILKDFF-AGGKRLRPKLVLLSGLCFSPVNTKMIYS 73
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A E IHTA+L+HDDV+D S RR + V+GN T+VL GD++ ++AF ++
Sbjct: 74 AVAAELIHTASLIHDDVIDRSDYRRNRPTINYVYGNHTAVLAGDYIFAKAFEVLCRQNLN 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L + GE+ Q S +L V E+ Y I+ KTA L +A + +
Sbjct: 134 RCMGYLVEAIQEMCTGEIIQARESPDLTVDEDRYFRTIEKKTASLIAACCKSGADCGKAD 193
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + +G+ LG AFQ+VDD+LD G+ +EMGK + D GK TLP I + +
Sbjct: 194 EVQIEKMGLFGLYLGYAFQIVDDILDITGDTSEMGKPVAHDLEEGKITLPYIYFLR--DR 251
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ ++ T+ + ++ + + ++ + A+ +A +KAK+ L LPDS +K
Sbjct: 252 VWEAKYRYTLMERNLATDMKYQIIRDLKHSGAITKAYAKAEECVKKAKEILNELPDSIYK 311
Query: 308 KSLMEVVDFCLQRL 321
+ L ++ + + R
Sbjct: 312 QILADLSEKVMLRK 325
>gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 321
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 103/320 (32%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
+ D+ +D+E + K I S+ +I D+ +L+ SGGKRLRP L L A +
Sbjct: 1 MFDVIQEDLEAFEPRLEKAIVSETALITDIGMHLVSSGGKRLRPALFLLAARGGASFDRA 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MV 121
+ +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF +
Sbjct: 61 RAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQVAILSGDYIFARAFKLVA 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E L+ + CTL+EGE+ Q + +E Y I+ KTA E+
Sbjct: 121 EEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPTSEHAYYERIRKKTADFLEICCELGG 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I G+ + + YG +G+AFQ+ DD+LD+R ++GK G D G TLPVI A
Sbjct: 181 FIGGMSPADTAQMAEYGHAIGMAFQITDDLLDFRRSSEDIGKPAGHDLAQGYVTLPVIRA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RC 300
K E+ + I + K++ +A ++R L + RA +Y + AK++L
Sbjct: 241 LAVLEKAERTELATLITNPKMTESEAARALALVRGTDGLDYAQKRADAYLEHAKNALPAG 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L D+ +++ + DF +R
Sbjct: 301 L-DARIRETCLMAADFIGRR 319
>gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanohalophilus mahii DSM 5219]
gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanohalophilus mahii DSM 5219]
Length = 321
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 16/323 (4%)
Query: 8 TLKDMEK----VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ +++K V+ I + + D + +YL +GGKRLRP + + +A + D
Sbjct: 3 LIDELKKRSTLVDESIQEFLPIDHPEELYRATRYLPDAGGKRLRPAVLMLSAEAVGGDSD 62
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + A A+E IH TL+HDD++D +RRG A + WG ++L GD L S+AF ++
Sbjct: 63 SVLPAAVALELIHNFTLIHDDIMDRDDIRRGMPALHVKWGTAGAILAGDTLYSRAFEIIS 122
Query: 123 ETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + EG+ + K V ++YL +I++KT+VL+ AA
Sbjct: 123 KMDADPQKLLKCVALLSRTCTKICEGQWLDVDFEKRDIVDVDEYLEMIENKTSVLYGAAA 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+V +++ G + V A+ +G GI+FQ+ DDV+D +GK+ G D + GK TL
Sbjct: 183 KVGAILGGASDEVADAMYEFGRLTGISFQIHDDVIDLVTPEEILGKSRGSDLKEGKKTLI 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ A G + E + + + A + E+ L A +Y + K
Sbjct: 243 ALHALNNGVELEC------FGKADATQDEINNAVAKLEESGTLAYVREMADNYLEDGKSK 296
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L L DS K++L+E+ D+ + R
Sbjct: 297 LDLLEDSPAKETLIEIADYMVSR 319
>gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
Length = 327
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ +++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 6 KIQQDLKEEVTQLNDLIISCLKSDTELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIH ATLLHDDVVDDS LRR K ++WG++TS+LVGDFL SQ+F ++I
Sbjct: 66 NHIKLASAVEFIHAATLLHDDVVDDSTLRRFKPTVNVIWGSKTSILVGDFLFSQSFKLMI 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ +A+ L+ + ++EGE+ QL + D I LF AA EV +
Sbjct: 126 ASGCIKAMNVLARASVIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGAACEVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + V + ++ +GM LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLDYLGSDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + +K + ++ I K + ++ K +M ++ +T S +A + L +
Sbjct: 246 YHKLEQDKKLWLENMIKSDKRTKDDFIKIRDLMLKHAIYNETVNYLSSLENEANNLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 306 PVQNIYKYYLFSIIRFILYRS 326
>gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
10152]
gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
10152]
Length = 345
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +E+V L++ + + + D +L +GGKR RP+ T+ T + D
Sbjct: 27 ELAATVRNGLEEVEKLLIAELSDGEDFLQDAALHLAKAGGKRFRPLFTILTGQLGPRPTD 86
Query: 63 NH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +E +H ATL HDDV+D++ +RRG + WGN ++L GD+L + A +
Sbjct: 87 PALITAGTVVELVHLATLYHDDVMDEATMRRGAPSVNSRWGNNIAILAGDYLFAHASRLT 146
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L G++R+ ++ E YL V+ KT L +AA
Sbjct: 147 STLGPDAVRIIAET-FAELVTGQMRETMGARESQDPVEHYLRVVWEKTGSLIAAAGRFGG 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + + L G +G AFQ+ DD++D + GK G D R G TLPV+ A
Sbjct: 206 TFSGADTAHIERLARLGDAVGTAFQISDDIIDISSASEQSGKTPGTDLREGVHTLPVLYA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ E + ++ ++ S + + +A ++ ++ +V + + SY +A L L
Sbjct: 266 LRE-EGAEADRLRTLLDHPLHSDDEVAEALELLGRSQGMVLAKEKLQSYADQAYAELAAL 324
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P +L ++V + ++R+
Sbjct: 325 PSGPANDALEQLVRYTIERV 344
>gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
[Ferroplasma acidarmanus fer1]
Length = 330
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 96/326 (29%), Positives = 164/326 (50%), Gaps = 5/326 (1%)
Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM- 56
MK + + +VN +L+ I +D + ++ KY I +GGKR RP+LT+ + +
Sbjct: 1 MKNFYEWQYGLRDKINEVNSRLLQAIKTDQPYLFEMSKYTIDAGGKRFRPLLTILSYEIS 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D+ + LA E IHTA+L+HDD++D S RRG+ +G +++VGD+L ++
Sbjct: 61 CNEPYDSILDLASGYELIHTASLIHDDIIDKSKYRRGRETLASRYGIDNAIVVGDYLFAK 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A+ + + + ++ + LAEG++ + NL + E Y +I +KTA FSA
Sbjct: 121 AYELGS-RYGKVVSKVMADGSSHLAEGQIIEALNIGNLSLDIETYNKIIMNKTAYFFSAC 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
E +++ A ++VR L + N+G+AFQ+ DD+LD G EMGK D + TL
Sbjct: 180 AEGATIAAMAPDNVRDKLSKFAYNMGMAFQITDDILDIVGNEKEMGKPTMVDLNHDVITL 239
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P+I A T K + + + K I+ ++ +L T A Y K+ +
Sbjct: 240 PIIHALSHVTGENKRTLVNILTGKYTDSDYKSKFRDILFKSGSLEYTFKIAKDYILKSVE 299
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L + S LM++ + R+N
Sbjct: 300 NLNGIGRSDDLGLLMDLALIVVDRIN 325
>gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
Length = 326
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 164/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKRPIEAELGDFIDLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A +E +HTA+L+HDDVVD+SA RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SEATLHAAVGLELLHTASLVHDDVVDESAERRGQASVNADYDNKVAVLVGDYVLSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QLS + D+TEE Y +I+ KTA LF A +
Sbjct: 124 VSHTHSEAIVRRLAGLGQTLSDGEILQLSNIQRKDITEEAYYRIIERKTAALFEACAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG A + +G NLGI FQ+ DD+ DY +GK G D GK TLPVI
Sbjct: 184 AVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYYDSETNIGKPTGNDLAEGKLTLPVIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + + ++ E + + +++ + E R + + +A+ L
Sbjct: 244 ALNSAKNDEMLALANKVKAHDVTREEIGRLVAFAKKSGGIEYAERRMWDFHAEAQTFLDR 303
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
D S + SL +D+ ++R
Sbjct: 304 YVKDESIRTSLRSYLDYVIKR 324
>gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL1A]
gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL1A]
Length = 323
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 157/305 (51%), Gaps = 8/305 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHT 76
I + ++ ++L +GGKRLRP + L + L + H LA E IHT
Sbjct: 23 RSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHT 82
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDDVVD++ RRG + + +VL GDFL +QA + ++ E ++ LS V
Sbjct: 83 ASLVHDDVVDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRV 142
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
LAEGE++Q + + E YL KTA L + + + +++ V +L
Sbjct: 143 IMDLAEGEIKQGLNRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSDVDQESLNSLYF 202
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G LG+AFQ+VDD+LD+ G ++GK D ++G T PV A E
Sbjct: 203 FGRQLGLAFQVVDDILDFTGNDEQLGKPAASDLQSGYLTAPVFYAL-----EENPRLSEL 257
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
IN ++L +A ++R++ A+ + A + ++KDS+ LPDS K +L+E+ +F
Sbjct: 258 INGKFSQKDDLDQALSLVRDSSAIKKSRELAEQFASESKDSISWLPDSPSKTALLELPEF 317
Query: 317 CLQRL 321
+ RL
Sbjct: 318 VISRL 322
>gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Bacteroides Thetaiotaomicron
gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Bacteroides Thetaiotaomicron
Length = 334
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + ++ V+ ++ GK +RP+L L A +
Sbjct: 6 ISLIKTPIEAELEDFKALFDTPLSDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAV 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ SVL GD+LL+ +
Sbjct: 66 TPATLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVSVLAGDYLLATSLVH 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+T + E + +S + LAEGEL QLS N +EE Y VI+ KTA LF+A E +
Sbjct: 126 AEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAA 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L V + G +GI FQ+ DD+ DY + ++GK G D GK TLP +
Sbjct: 186 ALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKKIGKPTGNDMLEGKLTLPALY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +G + + + + ++N + Y +KA D L
Sbjct: 245 ALNTTKDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFDLLAA 304
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ +L +D+ + R
Sbjct: 305 LPDSNICLALRTYLDYVVAR 324
>gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 324
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKTPIEAELEDFKALFDTPLSDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ SVL GD+LL+ +
Sbjct: 64 TPATLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVSVLAGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+T + E + +S + LAEGEL QLS N +EE Y VI+ KTA LF+A E +
Sbjct: 124 AEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L V + G +GI FQ+ DD+ DY + ++GK G D GK TLP +
Sbjct: 184 ALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKKIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +G + + + + ++N + Y +KA D L
Sbjct: 243 ALNTTKDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFDLLAA 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ +L +D+ + R
Sbjct: 303 LPDSNICLALRTYLDYVVAR 322
>gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 316
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 143/313 (45%), Gaps = 3/313 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E V + + S + + ++L +GGKR RP+L A + V A +
Sbjct: 5 LEAVEAELRDTVASADPFVTEAARHLADAGGKRFRPLLVALGAQFGDPSRAEIVSAAVVV 64
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D++ +RRG +A W N ++LVGD+L ++A + E +
Sbjct: 65 ELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYLFARAADVAAELGPEAVRL 124
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L G++ + + D YL VI KT L + + L +G
Sbjct: 125 QART-FARLVHGQIAETVGPRAGDDPVTHYLRVIAEKTGSLIATSAHFGGLFSGATPEHV 183
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
AL YG +G+AFQL DD+LD E E GK G D R G PTLPV+ A +
Sbjct: 184 AALAGYGETIGVAFQLSDDLLDIASESTESGKTPGTDLREGVPTLPVLYALAADDTDAAS 243
Query: 252 FW-KSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + G ++ + L +A ++RE+ AL SY + A+ L LP +++
Sbjct: 244 VRLREILATGALTDDVLHAEALGLLRESAALKRARETVRSYAEDARAQLAPLPQIPARRA 303
Query: 310 LMEVVDFCLQRLN 322
L + D R +
Sbjct: 304 LESLCDHIADRTS 316
>gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
Length = 326
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + D ++ V+ ++ GGKR+RP+L L A
Sbjct: 4 LSLIKQPIESELSDFIELFNSSLHHDDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S+ RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SSVTQHAAVGLELLHTASLIHDDVVDESSQRRGQASVNASYNNKVAVLVGDYVLSTALLQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T + + L+ + TL++GE+ QLS + +TEE YL +I KTA+LF +
Sbjct: 124 VSYTNANLIVRYLAELGQTLSDGEILQLSNIQREQITEEAYLQIIARKTAILFEICAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG +++G +LG+ FQ+ DD+ DY E+GK G D GK TLP+I
Sbjct: 184 AESAGASKDDVALARAFGKDLGMIFQIRDDIFDYFDSEKEIGKPTGNDLTEGKITLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A + I+ + + + +EN + E Y KA +
Sbjct: 244 ALNTTKNEQMMALARKAKALTITADEITELVAFTKENGGVEYAEKCMNDYHAKAMSFINN 303
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+ D K+SL +D+ +QR
Sbjct: 304 KVSDPIIKQSLTAYLDYVIQR 324
>gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str.
Madrid E]
gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii]
gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22]
Length = 327
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 193/321 (60%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+G+
Sbjct: 6 KIQQNLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEAGGKRIRPLLTIITAKMFDYKGN 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIH ATLLHDDVVD+S LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 NHIKLASAVEFIHAATLLHDDVVDNSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ +A+ L+ + ++EGE+ QL + D I LF AA EV +
Sbjct: 126 ASGCIKAMNVLAKASVIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGAACEVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + V + ++++G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLDYLGSDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ + K + ++ K +M ++ +T S +A + L +
Sbjct: 246 YHKLEQDKQLWLENMLKSDKRTKDDFVKIRDLMLKHAIYNETVNYLSSLENEANNLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 306 PVQNIYKYYLFSIIRFILYRS 326
>gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 321
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
+ D+ +D+ + + + I S+ +I DV +L+ SGGKRLRP L L A +
Sbjct: 1 MFDVIQEDLAALEPALEEAIVSETPLITDVGMHLVSSGGKRLRPALFLLAARGGASFDRA 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MV 121
+ +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF +
Sbjct: 61 RAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQIAILSGDYIFARAFKLVA 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E L+ + CTL+EGE+ Q + E+ Y I+ KTA E+
Sbjct: 121 EEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPTGEDAYYERIRKKTADFLEICCELGG 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
I G+ + + YG ++G+AFQ+ DD+LD+R ++GK G D G TLPVI A
Sbjct: 181 FIGGMSPADTAQMAEYGRDIGMAFQITDDLLDFRRSSEDIGKPAGHDLAQGYVTLPVIRA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RC 300
E+ + I + K VE + +A ++R + L + +A +Y +AK +L
Sbjct: 241 LSVLGAGEREELAALITNPKKPVEEVARALALVRASDGLDYAQEQADAYLVRAKAALPAS 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L D +++ + DF +R
Sbjct: 301 L-DPRIRETCLMAADFIGRR 319
>gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis]
gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase
gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis]
Length = 323
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 8/323 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +++ + + + ++ K+L +GGKR+RP L A + D
Sbjct: 6 SLFYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDAGGKRVRPALVFLVAKATSEKQD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
LA E IHTA+L+HDD++D+ RRG ++ + +VL GDFL +Q+
Sbjct: 66 INTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ ++A+S V AEGE+RQ + + ++ + Y+ KTA L +A+
Sbjct: 126 YLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEKSFYKTASLIAASCRG 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++++ G + + L YG ++G+AFQ++DDVLD G +GK G D NG T P++
Sbjct: 186 AAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPAGADLINGNLTSPLL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + I+ + ++ +++ + + + A Q A L+
Sbjct: 246 FSLTQEASL-----NDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQ 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S+ SL E+ F + RL+
Sbjct: 301 FLPQSTPVSSLKELTHFIITRLS 323
>gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
Length = 324
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKTPIEAELEDFKALFDTPLSDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ V+ N+ SVL GD+LL+ +
Sbjct: 64 TPATLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAVFNNKVSVLAGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+T + E + +S + LAEGEL QLS N +EE Y VI+ KTA LF+A E +
Sbjct: 124 AEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L V + G +GI FQ+ DD+ DY + ++GK G D GK TLP +
Sbjct: 184 ALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKKIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + +G + + + + ++N + Y +KA D L
Sbjct: 243 ALNTTKDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFDLLAA 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ +L +D+ + R
Sbjct: 303 LPDSNICLALRTYLDYVVAR 322
>gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
Length = 325
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++++ ++E L + + D ++ V+ ++ GGKR+RPML L A
Sbjct: 4 LSLIKEPISAELEDFISLFNQSLSHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A
Sbjct: 64 SSVTQHAAVGLELLHTASLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +T S+ + LS + TL++GE+ QL+ +N +TE Y +IK KTA LF A +
Sbjct: 124 VSKTHSEVIVRYLSELGRTLSDGEILQLTNIQNEAITETAYYEIIKRKTAALFEACAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + +A + +G NLGI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 184 AESAGASHDDVEAARKFGQNLGIIFQIRDDIFD-YYDSKEIGKPTGNDMLEGKLTLPVIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E + ++ + + +EN + + + + + +
Sbjct: 243 ALKSTGNAEMMMLARKVKAREVKQSEINQLVAFTKENGGIEYADQQMWKFHADCMRFIDE 302
Query: 301 -LPDSSWKKSLMEVVDFCLQRLN 322
+ DS+ K +L +DF ++R +
Sbjct: 303 RVGDSAIKTALKAYLDFVIERKS 325
>gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 351
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 145/323 (44%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + +V ++L+ SD I ++ +L +GGKR RP+L L A +
Sbjct: 29 EALSVALKDGLLRVEEVLLEYTRSDHAYISEITSHLAQAGGKRTRPLLVLLAAQFGDAAR 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A IE H ATL HDDV+D++ALRRG +A W N ++L GDFL ++A +
Sbjct: 89 AGVVEAAVVIELTHLATLYHDDVMDEAALRRGVASANQRWDNSLAILSGDFLFARA-STL 147
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +A+ + L G++ + KN + +L V+ KT L + A +
Sbjct: 148 LSELGPDAVRIQAETFERLVSGQISESVGPKNGQNPVDHHLEVLAGKTGSLIATAARFGA 207
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL- 240
+ AG + L +G G+AFQL DD+LD E + GK G D R G TLP+++
Sbjct: 208 MFAGCTAEQERILADFGELFGVAFQLSDDLLDIASESEQSGKTPGIDLREGVHTLPMLIA 267
Query: 241 --AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
D +A ++R + ++ Y +KAK L
Sbjct: 268 LAMDGSADPETARLQDLLHTDLSTDDAAFDEALALLRAHPSMGQARDVVRGYAEKAKSVL 327
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LP+ K++L V D + R
Sbjct: 328 EPLPEVPAKEALRAVCDVVISRT 350
>gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
Length = 323
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 170/322 (52%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D D+ + + + + ++ ++L +GGKR+RP + L + L D
Sbjct: 6 SLFDPVEADLAILVDNLKDLVRAQHPVLFAAAEHLFQAGGKRMRPAIVLLLSRALLPDQD 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+LLHDDVVDDS +RRG + ++GN+ ++ GDFL +QA
Sbjct: 66 LTPRHRRLAEITEMIHTASLLHDDVVDDSGVRRGVPSVHSLFGNRIAIQAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + E ++ LS V AEGE++Q + +T E YL KTA L + + +
Sbjct: 126 YLANLDNLEVVKLLSEVIKDFAEGEIQQGINCFDTSLTLEAYLEKSYYKTASLMANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +++G V Q L +YG +G+AFQ+VDD+LD+ G N +GK D R+G T PV+
Sbjct: 186 AGVLSGTSLQVNQDLYAYGRCVGLAFQIVDDILDFTGSTNALGKPACSDLRSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A EK + K I+ E+L +A ++ +++ + + A + +A L
Sbjct: 246 FAI-----AEKPYLKVLIDRHLEEEEDLDEAIALVNDSQGIPKSRALAEQFAHQAVHHLD 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S +++L+++ ++ L+RL
Sbjct: 301 FLPASDSRQALIDLTEYILKRL 322
>gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
Length = 324
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ML D K V+ I + + + +YL+ +GGKRLRP + + A +
Sbjct: 3 LMMLIDEIKKRSSHVDAAINELLPVTHPEELYKASRYLVDAGGKRLRPAVLILAAEAVGS 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E +H TL+HDD++D +RRG A + WG ++L GD L S+AF
Sbjct: 63 DLKSVLPAAVAVELVHNFTLIHDDIMDKDNIRRGMPAVHVKWGEAGAILAGDTLYSKAFE 122
Query: 120 MVIETKSQEALEALSLV-----ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++ + ++ + + EG+ + K VTE +YL +++ KT+VL++
Sbjct: 123 ILSKVENDPVRILKCMDVLSKTCTEICEGQWLDMDFEKRDRVTELEYLEMVEKKTSVLYA 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA ++ +L+ G + V ++L YG +GI FQ+ DDVLD +GK G D GK
Sbjct: 183 AAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLDMVAPEEVLGKVRGSDLMEGKY 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL VI AF +G G+ +VE + A + E ++ + A SY +
Sbjct: 243 TLIVIEAFGKGVTL------DIFGKGEATVEETEAAVRTLTECGSIDYVKNLAISYINQG 296
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
K L L D K L+++ D+ + R
Sbjct: 297 KAKLDVLRDCPEKDLLLQIADYMIAR 322
>gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
Length = 327
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 116/321 (36%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 6 KIQQDLKDEVTKLNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
+ S +A+ L+ + ++ GE+ QL + + + I LF A+ EV +
Sbjct: 126 ASGSIKAMNVLAKASAIISVGEVIQLVKLNERRIITIEEYYQIVKSKTAELFGASCEVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAEQVDHISKDIRYFGTLLGTIFQVIDDLLDYLGNDQQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++ + ++ I K + + + +M ++ +T + + L +
Sbjct: 246 YNKLEQDKRLWLENIIKCDKRTNDEFMQIRDLMVKHEIYNETINYLSNLEHEITKLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 306 PVQNIYKDYLFSIIRFILDRS 326
>gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735]
gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735]
Length = 325
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++++ ++E L + + D ++ V+ ++ GGKR+RPML L A
Sbjct: 4 LSLIKEPISAELEDFISLFNQSLSHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A
Sbjct: 64 SSVTQHAAVGLELLHTASLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V +T S+ + LS + TL++GE+ QL+ +N +TE Y +IK KTA LF A +
Sbjct: 124 VSKTHSEVIVRYLSELGRTLSDGEILQLTNIQNEAITETAYYEIIKRKTAALFEACAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + +A + +G NLGI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 184 AESAGASHDDVEAARKFGQNLGIIFQIRDDIFD-YYDSKEIGKPTGNDMLEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E + ++ + + +EN + + + + + +
Sbjct: 243 ALKSTENAEMMMLARKVKAREVKQSEINQLVAFTKENGGIEYADQQMWKFHADCMRFIDE 302
Query: 301 -LPDSSWKKSLMEVVDFCLQRLN 322
+ DS+ K +L +DF ++R +
Sbjct: 303 RVGDSAIKTALKAYLDFVIERKS 325
>gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
Length = 326
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + + ++ V+ ++ GGKR+RP+L L A
Sbjct: 4 LSIIKRPIESELNDFIDLFNSSLDHEDGLLTQVLHHIKQRGGKRMRPILILLIAKSFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SPTTQHAAVGLELLHTASLIHDDVVDESNERRGQASVNASYNNKVAVLVGDYVLSTALQQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S ++ L+ + TL++GE+ QLS K ++TE YL +I KTA+LF +
Sbjct: 124 VGYTNSNSIVKYLAELGQTLSDGEILQLSNIKREEITEAAYLEIIARKTAILFEICAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AGV +++G N+G+ FQ+ DD+ DY E+GK G D GK TLP+I
Sbjct: 184 AESAGVSEEDVALARAFGKNIGMIFQIRDDIFDYFESEKEIGKPTGNDLTEGKLTLPLIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR- 299
A + + IS + +++ +E + E Y KAK +
Sbjct: 244 ALNKTSDERMMMLARKAKMLSISSKEIEELVTFAKEKGGIEYAEECMKRYHAKAKVFIDT 303
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+ + K+SL +D+ ++R
Sbjct: 304 KISNPVIKQSLSTYLDYIIKR 324
>gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242]
gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase
[Methanococcoides burtonii DSM 6242]
Length = 322
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 11/312 (3%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V+ I + + S E + +YL +GGKRLRP + + + + + + A A+E
Sbjct: 14 VDKGIGEFLPISHPEELYRASRYLPDAGGKRLRPAVLMLSTEAVGGDPMSVIPAAVALEL 73
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H TL+HDD++D+ +RRG A + WG++ ++L GD L S+AF ++ +
Sbjct: 74 VHNFTLVHDDIMDNDDVRRGMPAVHVKWGSEGAILAGDTLYSKAFEILSVMEKDPERILK 133
Query: 134 S-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ EG+ + V+EE+YL +++ KT+VL+ AA +V +L+ G +
Sbjct: 134 CVALLSRTCTEICEGQWMDIEFENRDTVSEEEYLEMVEKKTSVLYGAAAKVGALLGGASD 193
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V A+ +G +GI+FQ+ DDV+D + +GK G D GK TL I A G +
Sbjct: 194 EVADAMYEFGRLVGISFQIQDDVIDMVTPEDILGKVRGSDLIEGKRTLIAIHALNHGVEL 253
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E G +S E + +A I+ ++ ++ + + ++ K L L DS K+
Sbjct: 254 EIF-----GKGGSVSPEQIDEAVSILEDSGSIKYAQDLSTETLERGKRMLDILGDSEAKE 308
Query: 309 SLMEVVDFCLQR 320
L+ V D+ + R
Sbjct: 309 ILLAVADYMVTR 320
>gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
Length = 323
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EY 59
L D+ + + + + + ++ ++L +GGKR+RP + L + +
Sbjct: 6 SLFTPVEADLRILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATMLEKD 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+S +RRG ++GN+ +VL GDFL +Q+
Sbjct: 66 ITPRHRRLAEITEMIHTASLVHDDVVDESNVRRGVPTVHSLFGNRIAVLAGDFLFAQSSW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + ++ LS V LA GE++Q + +++ E YL KTA L + + +
Sbjct: 126 YLANLDNLDVVKLLSEVIMDLAAGEIQQGLNRFDTNLSTETYLKKSYYKTASLIANSSKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L++ V + L +YG +LG+AFQ+VDD+LD+ G + +GK G D ++G T PV+
Sbjct: 186 AGLLSEVSQKSAENLYNYGKHLGLAFQIVDDILDFTGSTDTLGKPAGSDLKSGNLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A +E+ + + I +L++A ++ +++ + A + + + + +
Sbjct: 246 FAL-----KEQPYLEVLIERELAQEGDLEQAVGLILDSQGIQKARELAAHHAKASGEQIA 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S +++L+ + D+ L RL
Sbjct: 301 TLEPSESRQALINMTDYVLSRL 322
>gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
Length = 324
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 163/317 (51%), Gaps = 1/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ +++E L + S ++ V+ ++ GK +RP+L L A +
Sbjct: 7 IKSPISEELEDFKKLFESTLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLFGKVCPA 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A A+E +H A+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ A V
Sbjct: 67 TLHAAVALELLHNASLVHDDVVDESTERRGQLSVNAIFNNKVAVLAGDYLLATALVQVGM 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T++ + ++ +S + LA+GEL QLS NL +EE Y VI+ KTAVLF+A + +L
Sbjct: 127 TRNHDIIDIVSCLGQDLADGELLQLSNVSNLHFSEEVYFDVIRKKTAVLFAACTKAGALS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + ++ + +G +G+ FQ+ DD+ D E E+GK G D GK TLP +
Sbjct: 187 VGASDEKAESARLFGEYIGLCFQIKDDIFD-YSESKEIGKPTGNDMVEGKLTLPALHVLN 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I +G+ + + ++N + Y Y +KA L LPD
Sbjct: 246 TVKDKTAEEIAVKIKNGEATPGEIAHLIEFTKQNGGIEYASQVMYDYKEKALSLLASLPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K +L +D+ ++R
Sbjct: 306 TEVKAALAGYLDYVVER 322
>gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU121]
Length = 319
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + + I S +++ + +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEKRLEQAIHSQDKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEE 58
Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G ++ +A A+E IH ATL+HDDV+D S RRG++ W T+++ G+FLL+
Sbjct: 59 GVSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K + E LS + GEL Q N T +YL I KTA+L A E
Sbjct: 119 QHLSEIKDKRVHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ AG + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV
Sbjct: 179 VGAITAGSDIKTVRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPV 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L + E + I+R++ + ++ + Y KA + +
Sbjct: 239 LLEM---KDDSTFKQMIEDLNPNSDKEQFEACINIIRQSNNIQVSKDISEKYLDKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L D+ + +++ R
Sbjct: 296 DELEDNQARNLFKKLIKKMGSR 317
>gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
Length = 336
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 5/324 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L ++++ V + ++ + ++L +GGKRLRP+LTL A + +
Sbjct: 13 EKLATALTEELQHVEEHLRSATSHADTVVNEASQHLANAGGKRLRPLLTLLAAHVGQGVN 72
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ A +E H A+L HDDV+D + LRRG +A VWGN ++L GD L ++A +V
Sbjct: 73 DDVRQAALVVELTHLASLYHDDVMDSAPLRRGAPSAHEVWGNSVAILTGDLLFARASRLV 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G+L + ++ D E Y+ V+ KTA L + + + +
Sbjct: 133 ANLGPEAVHIQAVTFER-LCLGQLHETMGVRDGDDPVEHYIGVLADKTASLLATSALLGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG + ++QAL YG N+G+AFQL DD++D + + GK G D R PT+PV+L
Sbjct: 192 KFAGADHGIQQALARYGENVGVAFQLADDIIDLTSDGDVTGKTQGTDLREQVPTMPVLLL 251
Query: 242 FQRGTKREKNFWKS----TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + I+ L A +R +R + T RA +Y +A
Sbjct: 252 RAQVLSGHASQDDRDLLALIDSDLSDDAALAAAVEQLRAHRVIELTRQRASAYADQAVRE 311
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L LP+ +++L + ++R
Sbjct: 312 LDSLPEGPVRQALQDFAHILVERT 335
>gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 5701]
gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 5701]
Length = 323
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D+E + + I + ++ ++L +GGKR+RP + L + L G+
Sbjct: 6 ELLQPVENDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSPDGE 65
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
H LA E IHTA+L+HDDVVD+++ RRG + N+ +VL GDFL +QA
Sbjct: 66 LSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNNRLAVLAGDFLFAQASW 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ LS V LA+GE+RQ + + E YL KTA L + + +
Sbjct: 126 HLANLDDLAVVKLLSRVIMDLADGEVRQGLYRYDTGQSFETYLDKSYCKTASLIANSAKA 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S +++G+ + + L +G LG+AFQ+VDD+LD+ G ++GK D G T PV+
Sbjct: 186 SGVLSGLADDRLEDLYRFGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLATGYLTAPVL 245
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A E+ I ++L +A ++R A+ + A + ++A ++L+
Sbjct: 246 YAL-----EERPALAGLIERELCEPDDLAQALALVRGCEAIPRSRALAEGFAREAGEALQ 300
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S + +L+ + +F L RL
Sbjct: 301 WLSPSDSRTALLGLPEFVLSRL 322
>gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4]
gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4]
Length = 351
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 146/320 (45%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + +++V L++ + + + + +L +GGKR RP+ T+ TA + +
Sbjct: 33 QLAATVREGLKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPKASD 92
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A +E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V
Sbjct: 93 PSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLV 152
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ + E YL V+ KT L +A+
Sbjct: 153 STLGPEAVRIIAET-FAELVTGQMRETIGLRGEQDPVEHYLKVVWEKTGSLIAASGRFGG 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ A
Sbjct: 212 TFSGADADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYA 271
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ +A ++ + + + + + A+ L L
Sbjct: 272 LRDEGPEADRLRVLLDG-PVTDDGDVAEALALLERSPGMAAAKAKLEEFAVSARAQLAEL 330
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P +L+++VD+ ++R+
Sbjct: 331 PQGPANDALVKLVDYTIERV 350
>gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
Length = 342
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 125/303 (41%), Positives = 183/303 (60%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM +V+ +I +R+ S+V ++ V +++I +GGKRLRP L L L Y G + +
Sbjct: 28 ALVADDMREVDKVIGQRLLSNVPLVDWVARHIIAAGGKRLRPALLLMVCGALGYGGAHRL 87
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +E IHTATLLHDDVVD S LRRG+ A ++G VLVGDFL +++F ++ET
Sbjct: 88 SLAAVVELIHTATLLHDDVVDASTLRRGRPTANEIFGAPACVLVGDFLHTRSFQTMVETG 147
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ + +++A
Sbjct: 148 NMRVMEILAEATNVIAEGEVLQLMNMHDATLDEAGYLRVIRSKTAKLFEASARLGAVLAR 207
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ QA +YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRG
Sbjct: 208 SSPDIEQACATYGQALGTAFQIIDDVLDYDGDSAEMGKNLGDDLREGKATLPLIAAMQRG 267
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + I +G S E L + I+R AL T A + ++A + + LP ++
Sbjct: 268 SPGQALIVRQAIKEG--STEQLAEIVGIVRATGALEVTRAAACTEARRAMSAAQQLPSNA 325
Query: 306 WKK 308
+ K
Sbjct: 326 YSK 328
>gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289]
gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289]
Length = 326
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ +++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKRPIDVELDDFIDLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD+SA RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SEATQHAAVGLELLHTASLVHDDVVDESAERRGQASVNADYDNKVAVLVGDYVLSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QLS + D+TEE Y +I+ KTA LF A +
Sbjct: 124 VSHTHSEAIVRRLAGLGQTLSDGEILQLSNIQCKDITEEAYYRIIERKTAALFEACAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG A + +G NLGI FQ+ DD+ DY +GK G D GK TLPVI
Sbjct: 184 AVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYYDSETNIGKPTGNDLAEGKLTLPVIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + + +++ E + + +E+ + E R + + +A+ L
Sbjct: 244 ALNSAKNDEMLALANKVKAHEVTREEIGRLVAFAKESGGIEYAERRMWDFHAEAQTFLDK 303
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
D S + SL +D+ ++R
Sbjct: 304 YVKDESIRTSLQTYLDYVIKR 324
>gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 394
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L D+ D+ K+N + I ++ ++ + + +GGKRLRP L +
Sbjct: 72 IASLLDVVSDDLLKLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEV 131
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 132 AGLSELTTEHKRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRIAVLAGDFMF 191
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +
Sbjct: 192 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQQSTLFDCDVTLDDYLLKSYYKTASLLA 251
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ +++ +GV +V + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 252 SSTRSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 311
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A Q + + + G +S A ++ ++ + + A G A
Sbjct: 312 TAPVIFALQESPELREIIDSEFCDTGSLSA-----AMELVHKSGGIRRAQELAKEKGDLA 366
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L +V + L+R+
Sbjct: 367 LQNLQCLPRSHFRTALENMVTYNLERI 393
>gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 326
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/318 (34%), Positives = 171/318 (53%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ LK++ +N I + I + +++ V +++ +GGKRLRPMLTL A L +RGD
Sbjct: 7 QLKATFLKELPAINAAIAQEIDALPKLVRPVAAHVMEAGGKRLRPMLTLLFARALSFRGD 66
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
N LA ++EF+H+ATL+HDD++D+S LRRGK AA ++G +VL GD LL+ A +V
Sbjct: 67 NLQTLASSLEFLHSATLMHDDILDNSELRRGKRAAHTLFGITPTVLAGDVLLALANEIVA 126
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
T + +S A GE+ +++ + +T +Y+ +I KTA L +A E +
Sbjct: 127 RTNNPALTSCISKAIMQTATGEIMEIAAIRKAHITRAEYIEIITGKTAYLIQSACEFGVI 186
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A R K++G+NLGIAFQLVDD LDY + GK +G D R GK TLP++L
Sbjct: 187 AAEGSERARAGAKTFGLNLGIAFQLVDDALDYTSRADTSGKPLGGDLREGKFTLPLLLYL 246
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + ++ + D + + + T A SY A +L LP
Sbjct: 247 ESLPEDQREIVTRELTDVNLHPVRQDQIIADVVGQGFAEKTRDEARSYLALASQALAVLP 306
Query: 303 DSSWKKSLMEVVDFCLQR 320
+ KK L +++F L R
Sbjct: 307 ECLEKKLLGAMIEFVLTR 324
>gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
Length = 326
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 160/321 (49%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++ + L + + + + + + ++ GK +RP+L L A
Sbjct: 6 LAEIRRPIEAELNEYARLFAESLTHEDDFLGQALSHMRRRNGKMMRPILVLLAAKAFAPI 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A +E +HTA+L+HDDVVDDS RRG+ + ++GN+ +VLVGD+LLS++
Sbjct: 66 SEKTLRSAVTLELLHTASLIHDDVVDDSGERRGQASVNALFGNKVAVLVGDYLLSKSLHQ 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T +E ++ + TLAEGE++QL+ + TEE Y VI+ KTA LF+A +
Sbjct: 126 AYLTDDLRIVEIVARLGGTLAEGEVKQLANIRQSVATEEAYFDVIRHKTAALFAACTRLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A + + ++G +G+ FQ+ DD+ DY + +GK G D GK TLP I
Sbjct: 186 AISADCAPATVEQAATFGEIIGLCFQIRDDIFDYYDDET-IGKPTGNDLMEGKLTLPAIY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + W + + D + E +K + + + R ++A L
Sbjct: 245 ALNHTNRTDVQTWVAHVKDSTATPEEIKSLVDFTKGSGGIDYAHQRMEELRKEAAQVLNA 304
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
PD + ++SL +++ + R
Sbjct: 305 FPDEAVRRSLAAYLEYTIDRK 325
>gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
Length = 322
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 168/320 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M D+ +++ +N + S ++ VV++++ +GGKRLRP+L + A L ++
Sbjct: 1 MSDFADILSREVPAINRHLEDATASLSPLVQPVVRHVLLAGGKRLRPLLAILVARALGHQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LAC++EF+H+ATLLHDD+VD + LRRG+ +A +G ++L GD LL+ A
Sbjct: 61 EDDVYPLACSLEFLHSATLLHDDIVDGATLRRGRPSAHTRFGATHTILAGDVLLALANRT 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E E LS A GE+ +++ ++ D+ + YL +I KTA L AA
Sbjct: 121 VAEYDDPELTRILSEALLQTATGEILEIAHLRDTDLPLDTYLSIITGKTAHLLQAACHCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AGV ++ +A K+ G+N GIAFQLVDD LDY GK G D + GK TLP+IL
Sbjct: 181 AVLAGVDANLCEAAKTLGVNCGIAFQLVDDALDYTSPAAVSGKPTGGDLKEGKVTLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++S E+++ + T A +Y +KA+ +L
Sbjct: 241 YLAAQPFEARRRLAEDFRQDQLSGEDIEYLRGNIVAGGHAEKTREMAAAYLEKAQAALAV 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S + +V+ L R
Sbjct: 301 FPPSPEADLIGQVLAPMLAR 320
>gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 321
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L+ ++ +N + + + E + V +++ +GGKRLRP+LT+ TA +L +
Sbjct: 1 MIQLKARIALELPAINRALDRAVEVLPEPVRPVTRHIFEAGGKRLRPLLTVLTARLLGHD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ LA +E +H ATLLHDDV+D++ RRGK AA ++ + +L GD LL++A
Sbjct: 61 REDIHDLAVTLEMLHAATLLHDDVLDNAMSRRGKPAAHTLYNVSSVILAGDALLAEANAQ 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V S A GE+ +++ +D + Y +++ KTA L AA E+
Sbjct: 121 VARRGDPRLTRCFSEATSRTAAGEILEIAAQGRVDTSAGHYEEIVRGKTAWLIRAACEMG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A + A +YG NLG+AFQ+VDD LD + GK G D R GK T P+ L
Sbjct: 181 ALAAEADEASVAAAAAYGENLGMAFQMVDDALD-FAPESATGKPTGGDVREGKLTPPLRL 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E+ + + +S + + + +RE +A ++ A+ +L
Sbjct: 240 YRDSLNDAEREAFDAAFAGFAMSAADAESVALRIREAGFDTAVRRQADTFLDAARRALHS 299
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD +K ++++ D+ R
Sbjct: 300 LPDRPERKVMLKMTDYVRDRK 320
>gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
Length = 325
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 162/322 (50%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 VSTIKQPINSELNDFIALFDESLSHTDGLLSQVLDHVRQRAGKRMRPILILLMAKNYGQI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VL GD++LS A
Sbjct: 64 TSTTLNAAVGLELLHTASLMHDDVVDESEERRGQASVNAEYNNKVAVLAGDYVLSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T ++ +E L+ + TL+ GE+ QLS +N ++E Y VI KTA LF A EV
Sbjct: 124 VNFTHNEAIIETLAELGRTLSNGEILQLSAIQNQSISETTYYDVISQKTAALFEACAEVG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG + +++G N+GI FQ+ DD+ D + +E+GK G D GK TLPVI
Sbjct: 184 ALSAGADAAATTQARNFGRNIGIIFQIRDDIFD-YYDTDEIGKPTGNDMAEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + G +S + + + + + + + R + + +A D L+
Sbjct: 243 ALKSTGDEAMMNLARKVKQGTVSHDEIAQLVQFTKTHGGIEYADKRMWEFHAEAMDYLKN 302
Query: 301 -LPDSSWKKSLMEVVDFCLQRL 321
+ D K +L +D+ ++R
Sbjct: 303 HVKDVEIKTALQAYIDYVVKRT 324
>gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group]
Length = 414
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ D+ K+N + + ++ ++ + + +GGKRLRP L +
Sbjct: 92 VSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 151
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 152 AGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 211
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +
Sbjct: 212 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIA 271
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 272 ASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 331
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A +++ + I+ +L A ++ + + A G+ A
Sbjct: 332 TAPVIFAL-----QDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIA 386
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
SL+CLP S ++ +L +V + L+R+
Sbjct: 387 IQSLQCLPRSEFRSTLENMVKYNLERI 413
>gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group]
gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group]
Length = 372
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ D+ K+N + + ++ ++ + + +GGKRLRP L +
Sbjct: 50 VSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 109
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 110 AGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 169
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +
Sbjct: 170 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIA 229
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 230 ASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 289
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A +++ + I+ +L A ++ + + A G+ A
Sbjct: 290 TAPVIFAL-----QDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIA 344
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
SL+CLP S ++ +L +V + L+R+
Sbjct: 345 IQSLQCLPRSEFRSTLENMVKYNLERI 371
>gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 328
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + K+++ + L + + ++ +++ GKR+RP++ + +A +
Sbjct: 8 LQFITKPVQKELDAFDKLYTNILHVPISEFQYMLNFILKKKGKRIRPIILILSAKLCGEP 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +H ATL+HDDVVD++ LRRG + +GNQ +VL+GD++LS+A
Sbjct: 68 TIKTIEYAVILELLHVATLIHDDVVDNAVLRRGNPSVMAKFGNQAAVLLGDYILSKAIKQ 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
IETK+ L+ L+ +A L EGEL QL S + E Y +I+ KTA+LFS ++
Sbjct: 128 GIETKNFAILQVLTHLAQNLCEGELTQLIFSSKKIIDENHYFEIIRKKTAILFSVCSKIG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + L+ G LGI FQ+ DD+LD + ++GK D + GK TLP+I
Sbjct: 188 ALSVNADVKKNKTLQLIGEYLGICFQIRDDLLD-YLDSEKIGKPTKNDIKEGKITLPLIY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + K + I S EN+++ +E + + + + + L
Sbjct: 247 ALKTAPKAKSKPMMLIIKKQDFSSENVQQLINFTKEQKGIEYAQEKMLKIKTNIIELLNY 306
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P S KKS++ +VD+ ++R
Sbjct: 307 FPHSEAKKSMLRLVDYIIERK 327
>gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 320
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ +L DM V+ +I +R+ SD+ ++ V +Y+I GGKRLRP L L A L+YR
Sbjct: 1 MEQFYNLIELDMTAVDAVIRRRLHSDIALVRQVAEYIIQGGGKRLRPALVLLAAGALDYR 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H LA IEFIHTATLLHDDVVD S LRRG+ A ++GN SVLVGDFL S+AF M
Sbjct: 61 GTHHHELAAVIEFIHTATLLHDDVVDGSDLRRGRDTANAIFGNSASVLVGDFLYSRAFQM 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + LS +AEGE+ QL + DV E YL VI+ KTA LF AA ++
Sbjct: 121 MVAVDDMRVMRVLSDATNVIAEGEVLQLMNCHDADVDEAGYLQVIRYKTAKLFEAAAQLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + Q + +YG++LG AFQL+DDVLDY G E GK++G+D GKPTLP+I
Sbjct: 181 AIIGGGSAAAEQGMATYGIHLGTAFQLIDDVLDYSGAEVETGKHLGDDLAEGKPTLPLIF 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q G + + I G + +R AL +A + + A +L
Sbjct: 241 VLQHGNTEQAACVRRAIESGGRD--DFPNVLAAIRATGALDYARRKARAEAELAAAALSV 298
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P S +K SL+E+ F + R
Sbjct: 299 VPASQYKDSLLELSLFAVARS 319
>gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
Length = 325
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ +++ L + ++ V++++ GKR+RPML L A
Sbjct: 4 LTLIKQPISSELDTFINLFNDSLSHADGLLGQVLEHIRKRAGKRMRPMLILLMAKNFGEV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TEVTQRATVGLELLHTASLVHDDVVDESGERRGQASVNASYNNKVAVLVGDYILSTALLN 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T Q + L+ + TL+ GE+ QL+ +N +++EE Y VI+ KTA LF A +
Sbjct: 124 VSLTGDQAIITYLAQLGRTLSNGEILQLTNIRNQEISEEVYYQVIRQKTAALFEACAGMG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G +A + +G NLGI FQ+ DD+ D + +GK G D GK TLPVI
Sbjct: 184 AMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD-YYDSEAIGKPTGNDMAEGKLTLPVIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A E + +G ++ + + + N + E R + + + +
Sbjct: 243 ALHTTGDEEMRALAMKVKEGSVTKGEIDELVAFAKRNGGIEYAERRMGDFHAECMEFIGS 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ D + ++L ++F ++R +
Sbjct: 303 HVTDGAIGEALKAYLNFVIERKS 325
>gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
Length = 322
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 159/308 (51%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M D+ +++ +N + + ++ VV++++ +GGKRLRP+LT+ A +
Sbjct: 1 MSDFADILSREVPAINEYLEDAAATLSPLVQPVVRHVLLAGGKRLRPLLTVLVARAFGHD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LAC++EF+H+ATLLHDD+VD + LRRG+ +A + +G ++L GD LL+ A +
Sbjct: 61 KDDVYPLACSLEFLHSATLLHDDIVDGAPLRRGRESAHVRFGATHTILAGDVLLALANRI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E E LS A GE+ +++ ++ D+ E YL +I KTA L AA
Sbjct: 121 VAEYDVPELTRILSEALLQTATGEILEIAHLRDTDLPLETYLSIITGKTAYLLQAACHCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + QA S G+N GIAFQLVDD LDY GK G D + GK TLP+IL
Sbjct: 181 AILAGADARLCQAAMSLGVNCGIAFQLVDDALDYTSPAAVSGKPTGGDLKEGKVTLPLIL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++S E+++ + T A +Y KA+ +L
Sbjct: 241 YLAEQPFEARRRLAEDFRQDQLSAEDIEYLRGNIVAAGHAEKTREMAATYLAKAQAALAV 300
Query: 301 LPDSSWKK 308
P S
Sbjct: 301 FPPSPEAD 308
>gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
Length = 324
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + DM L + + M+ ++K++ GGKR+RPML TA L
Sbjct: 4 LSTIRKPIDGDMNNFVELFKQSLTHGEGMLEQILKHIRERGGKRMRPMLVFLTARNLGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D A +E +HTA+L+HDDVVD+S+ RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SDVTQNAALGLELLHTASLVHDDVVDESSERRGQPSVNAAYNNKVAVLVGDYILSTALLR 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + ++ L+ + LA GE+ QLS N D++E+ Y VI KTAVLF + +
Sbjct: 124 VALSDNHRIVQHLAELGRKLAAGEVLQLSNISNQDISEDVYYQVIDQKTAVLFESCCILG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + + +G N+G+ FQ+ DD+ D + E+GK G D GK TLP+I
Sbjct: 184 AISVGASEEMIEKAAKFGHNVGMIFQIRDDIFD-YYDSAEIGKPTGNDMLEGKLTLPIIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + G I+ + + ++ + E + + ++A+ +
Sbjct: 243 SLTHYSSSAMLTLAKKVKSGTINKDEIAVLIEFAKQYGGIKYAERKMEEFAREARSFIDE 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ S +D+ +QR
Sbjct: 303 CVKPELQDSFKAYLDYVIQR 322
>gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 318
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 6/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L ++++K+ + I S ++ + +L+ SGGKR+RP + ++
Sbjct: 1 MDKLN--INREIKKIEKELKNTIKSSNPILEEASLHLLSSGGKRVRPSFVVLSSEYGVNP 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
R ++ +A ++E IH ATL+HDDV+D S RRG++ W +T++L G++LL+ A
Sbjct: 59 RNEDTYKIAVSLELIHMATLVHDDVIDRSDKRRGRLTISKKWDQETAILTGNYLLALALN 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + LS + GEL Q N + T +YL I KTA+L A E+
Sbjct: 119 NISSIQDKRIHIILSNAIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLATEL 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L A LK G +G++FQ+VDDVLD+ ++GK +G D NG TLPV+
Sbjct: 179 GALSANADLKTANKLKRIGHYIGMSFQIVDDVLDFTSTEKQLGKPVGSDLMNGHLTLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L K + E+ + ++ + +++ ++ + Y KA L
Sbjct: 239 LE---ARKNPQFKAIIESLSPDSPKEDFEYCVNYIKSSDSIMQSKEISKQYLNKAIKILD 295
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L S +++ R
Sbjct: 296 ELEISPASSWFKKLIKRMESR 316
>gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
DSM 15436]
gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
DSM 15436]
Length = 332
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+ LE L DME+V L+ K + ++ ++ +L +GGKR+RP+L L A +
Sbjct: 6 EQLEALLGADMERVEDLLYKSVTGSGALVDELTSHLSNAGGKRMRPLLVLICAQLGSPSQ 65
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A A+E H ATL HDDV+D + RRG AA+ WGN ++L GD L ++A
Sbjct: 66 VASQDVIDAATAVELTHLATLYHDDVMDSAPQRRGVPAAQHQWGNNRAILAGDVLFARAS 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+V Q ++ + L G+L + + E Y+ V+ KT L + A
Sbjct: 126 RLVA-RLGQRTIDYHAQTFERLCIGQLNETFGPETDFDPVEFYIKVLSDKTGSLINTAAV 184
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ G + V +A+ YG +G+AFQL DDV+D + + GK G D G TLP+
Sbjct: 185 FGAWHGGATDEVAEAVGVYGERIGVAFQLADDVIDLTSDGSVSGKTPGTDLVEGVTTLPI 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISV----ENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+L +R + + + S L +R++ + +T A + A
Sbjct: 245 LLLRERLSAGTLDAEGQRLLADIDSDLSDSAKLASVVARLRDSEVVAETRQIAQDWAGAA 304
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D+L L DS K++L+++ + R+N
Sbjct: 305 VDALAPLEDSVAKQALVDLAQMMVDRMN 332
>gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
ATCC 49725]
gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
ATCC 49725]
Length = 334
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + ME V + + + D V +L +GGKR RPM+ L + G
Sbjct: 17 QLNERIGAGMEAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGC 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 EKVIKSATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + V Y+ VI+ KTAVL ++A + +
Sbjct: 137 SQLDTHTVGHFADTFEELVTGQMRETIGAGEANPVD--HYMAVIQEKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G AL G +G+ FQ+VDDV+D + + GK G D R G TLPV+ A
Sbjct: 195 YHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + +++A ++R++ +Y + ++ L L
Sbjct: 255 LEEDGEVGDQLRELLTGPLE-TDAEVERAIELLRQSGGRQRALEDINAYLRTVEEQLSVL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++S ++L ++ D+ ++R+
Sbjct: 314 PENSASQALRQLADYTVRRV 333
>gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
warneri L37603]
gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
warneri L37603]
Length = 319
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L +++KV + + I S +++ + +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNNEIKKVEKRLEQAIHSQDKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEE 58
Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G ++ +A A+E IH ATL+HDDV+D S RRG++ W T+++ G+FLL+
Sbjct: 59 GVSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K + E LS + GEL Q N T +YL I KTA+L A E
Sbjct: 119 QHLSEIKDKRVHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ AG LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV
Sbjct: 179 VGAITAGSDIKTIHKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPV 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L + E + I+R++ + ++ + Y +KA + +
Sbjct: 239 LLEM---RDNSVFRQMIEELHPNSNKEQFEACINIIRQSNNIQVSKDISEKYLEKALNLI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L D+ ++ +++ R
Sbjct: 296 DELEDNQARQLFKKLIKKMGSR 317
>gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
3776]
gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
3776]
Length = 338
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 2/307 (0%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
V ++ + SD + D++++ GKRLRP+L L +A + H LLA +E I
Sbjct: 33 VERILWNELESDQPCVKDILQHATRFRGKRLRPILVLLSARACGEVNETHRLLAAVVEMI 92
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H ATL+HDDV+D+++ RR W N+TSVL GD+L + AF + E + A +
Sbjct: 93 HIATLVHDDVLDEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLASELPTSHACRIIG 152
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ EGEL Q+ NLD+ EE Y +I KTA L + + + + A V A+
Sbjct: 153 RATNKVCEGELTQIHERGNLDLNEETYFKIINGKTAELTAVSAYLGAHYADQPAEVVNAV 212
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
++YG LG+AFQ+ DD+LD G + GK +G D + K TLP+I T + +
Sbjct: 213 EAYGRKLGLAFQIADDLLDILGVEKKTGKTLGSDLKKQKLTLPIIRLLATATSADATIIR 272
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + + + + ++ AL T A+ ++A + L LP+S + L E+
Sbjct: 273 ELLAHPE--DDTAGQLREYLHKSDALEYTSQTAHKLVEEACEHLNVLPESQARHWLCEIA 330
Query: 315 DFCLQRL 321
F ++R
Sbjct: 331 RFSVERS 337
>gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 325
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ +++ N L + + ++ + ++ GKR+RPML L A
Sbjct: 4 LSLIQHPITQELSDFNQLFEESLSHADGLLSQALSHIRQRTGKRMRPMLILLIAKNFGGV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TSIAQHAAVGLELLHTASLVHDDVVDESGERRGQASVNATYDNKVAVLVGDYILSTALLQ 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ ++ L+ + TL+ GE+ QLS +N D++EE Y VIK KTA LF + +
Sbjct: 124 VSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEEVYYQVIKQKTAALFESCAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A + +G LGI FQ+ DD+ DY E+GK G D GK TLPVI
Sbjct: 184 AQAGKATPEEVEAARQFGQTLGIIFQIRDDIFDYFES-KEIGKPTGNDMAEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + D ++ + + + ++ + E R Q+ D +
Sbjct: 243 ALNSTRNATMLQLAHKVKDNTVTSDEIVQLVAFTKQQGGIEYAEQRMGELHQQTLDYIDK 302
Query: 301 -LPDSSWKKSLMEVVDFCLQRL 321
+ D K +L +D+ ++R
Sbjct: 303 HVTDVDIKTALQAYIDYVVKRT 324
>gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 323
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 138/322 (42%), Positives = 198/322 (61%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A EY+
Sbjct: 4 LSDIQSLLKLDLQKTDEILINRLSSNVALINQMGHYIIHAGGKRLRPLLLLLCARATEYQ 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G +H L+A IE IHTATLLHDD+VD+S RRGK VWGN SVLVGDFL S+AF M
Sbjct: 64 GTHHYLMAVVIELIHTATLLHDDIVDESITRRGKDTVNEVWGNAPSVLVGDFLYSRAFEM 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE S + LS ++AEGE+ QL KN ++TE +Y VI+ KTA LF AA ++
Sbjct: 124 MIEPNSMYIIRILSKTTNSIAEGEVLQLLNCKNTELTETEYYAVIERKTACLFQAATQIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L++GV + ALK YG++LG AFQ++DDVLDY V MGK +G+D GK TLP+I
Sbjct: 184 GLLSGVDKAQESALKDYGLHLGNAFQIIDDVLDYESNVKTMGKEVGDDLSEGKTTLPMIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + IN S + + I++ +A T +A+ Q AK SL+
Sbjct: 244 ALAHTSGDNRQLLEDAINQADNSK--IVQVIKILQSIKAFDYTRNQAHKSAQLAKQSLKL 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+PDS +K +L+ + D LQR +
Sbjct: 302 IPDSDYKDALILLCDLSLQRQS 323
>gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
Length = 326
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 164/322 (50%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKQPIETELGDFIDLFNHALDHEDGLLRTVLNHIKQRAGKRMRPILILLMAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD++A RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SEATQHAAVGLELLHTASLVHDDVVDEAAARRGQASVNADYDNKVAVLVGDYVLSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QL +N ++TEE Y +I+ KTA LF + +
Sbjct: 124 VSYTHSEIIVRYLAELGRTLSDGEILQLWNIQNKEITEEVYYKIIERKTAALFESCAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A + +A + +G +LGI FQ+ DD+ DY E+GK G D GK TLP+I
Sbjct: 184 AESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGKPTGNDMAEGKLTLPIIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + +++ E++ K + + + E R + + +A+ L
Sbjct: 244 ALNSTKNEEMLALAHKVKAHEVTREDIDKLVEFAKVSGGIEYAERRMWDFHAEAQTFLDK 303
Query: 301 L-PDSSWKKSLMEVVDFCLQRL 321
D S + +L +D+ ++R
Sbjct: 304 YVKDESIRSALQTYLDYVIKRK 325
>gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
Length = 324
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 163/317 (51%), Gaps = 1/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ +++E L + S ++ V+ ++ GK +RP+L L A +
Sbjct: 7 IKSPISEELEDFKKLFESTLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLFGKVCPA 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A A+E +H A+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ A V
Sbjct: 67 TLHAAVALELLHNASLVHDDVVDESTERRGQLSVNAIFNNKVAVLAGDYLLATALVQVGM 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T++ + ++ +S + LA+GEL QLS NL +EE Y VI+ KTAVLF+A + +L
Sbjct: 127 TRNHDIIDIVSCLGQDLADGELLQLSNVSNLHFSEEVYFDVIRKKTAVLFAACTKAGALS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + ++ + +G +G+ FQ+ DD+ D E E+GK G D GK TLP +
Sbjct: 187 VGASDEKAESARLFGEYIGLCFQIKDDIFD-YSESKEIGKPTGNDMVEGKLTLPALHVLN 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I +G+ + + ++N + Y Y +KA L LPD
Sbjct: 246 TVKDKTAEEIAVKIKNGEATPGEIAHLIEFTKQNGGIEYASQVMYDYKEKALSLLASLPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K +L +D+ ++R
Sbjct: 306 TEVKVALAGYLDYVVER 322
>gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 322
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 169/313 (53%), Gaps = 3/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V ++ KRI + + I +++ +I++ GK LRP + EY + + L
Sbjct: 11 IKSELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDREKILPL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +H ATL+HDD++D++ +RR K + +G +V +GDFL S++F ++ + +
Sbjct: 71 AAAIEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNITV 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L+ +S V + +GE+ Q N+ +T DYL I +KTA LF+ + V + +
Sbjct: 131 SNLKKVSKVVSKICKGEIGQFESRHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
S+ +AL S G N+G+AFQ++DD+LDY G+ +GK +G D + G TLP K
Sbjct: 191 ESLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIKEGVFTLP---LIYSLDK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + S +++++ ++++ + ++ A Y +KA D + L DS K
Sbjct: 248 NKDKKILELLKKESYSDDDIQQIIEFVQQSGGIDKSKMLAQKYTEKAFDKISMLKDSPPK 307
Query: 308 KSLMEVVDFCLQR 320
+ L+EV L R
Sbjct: 308 QVLIEVTGKLLYR 320
>gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
YIT 12066]
gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
YIT 12066]
Length = 323
Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 13/329 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M + E L +M+KV +++ SD + + + +I +GGKR+RP L L + +L
Sbjct: 1 MALFEALIGSEMKKVEATLVEGF-SDSALEAHVNSLCLSIINAGGKRMRPALVLLASHLL 59
Query: 58 ----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ LA +E +HTATL+HDDV+D+S +RRG+ GN +VL GD++
Sbjct: 60 PSYTDEEETAVCKLAAGVELLHTATLIHDDVIDNSLMRRGRPTLNSTSGNHVAVLAGDYM 119
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
++ F + + K + L +S TL GEL QL +++++ EDY I KT LF
Sbjct: 120 FTRCFATIKDLKKADVLSIISDTLATLVTGELDQLKNEGDVNISVEDYYTTIYCKTGALF 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ ++ G + ALK+YG LG AFQ++DD LDY + +GKN GED ++ +
Sbjct: 180 ELSASAPAVYLGEEEKYITALKNYGRYLGNAFQIIDDCLDYSSDSKTLGKNAGEDLQDKR 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TLPVI A QR ++ EK I + +L+ + + L + + A G++
Sbjct: 240 ITLPVIFALQRCSEAEKEILIKAIEN-----ADLETVISYINKYDTLKECKNAAEQSGEQ 294
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L P++ +K++L+ +V+ L R N
Sbjct: 295 AVKELNVFPENEYKQALISLVERALNRKN 323
>gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
Length = 406
Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 172/325 (52%), Gaps = 11/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------ 56
L +L D++ +N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 86 NLFELVADDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAG 145
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q
Sbjct: 146 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 205
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ + ++ +S V A GE++Q S + D +DYL KTA L +A+
Sbjct: 206 ASWYLANLENLQVIKLISQVIKDFASGEIKQASSLFDCDAKLDDYLLKSFYKTASLVAAS 265
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T
Sbjct: 266 TKGAAIFSRVETDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 325
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVI A ++ + + G L++A ++RE + + A A
Sbjct: 326 PVIFALEKEARLREIIESEFCEAGS-----LEEAIEMVREGGGIRRAQELAREKADDAIK 380
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S++ +L E+V + L+R+
Sbjct: 381 NLQCLPRSAFLSALEEMVMYNLERI 405
>gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
2) (spore germination protein c3) [Staphylococcus
capitis SK14]
gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
caprae C87]
gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
2) (spore germination protein c3) [Staphylococcus
capitis SK14]
gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
caprae C87]
Length = 319
Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
M L +++KV + + I S + + + +L+ SGGKR+RP+ + ++ E
Sbjct: 1 MAKLN--INNEIKKVEERLERAIQSTDQTLEEASFHLLSSGGKRVRPVFVILSSQFGTSE 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ +A A+E IH ATL+HDDV+D S RRG+ W T++L G+FLL+
Sbjct: 59 GTSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGL 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K +S + GEL Q N + +YL I KTA+L A E
Sbjct: 119 QHLSEIKDARVHSIISNSIVDVCRGELFQFQDQFNSEQNITNYLRRINRKTALLIQLATE 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V ++ +G + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV
Sbjct: 179 VGAITSGASKETIRKLKLIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPV 238
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L ++ ++ + + +R++ + +++ + Y KA +
Sbjct: 239 LLEMRKNKDFKQKITNLNAQSPQ---SDFDTCIQTIRKSDNIEESKAISEKYLNKAIALI 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + K +++ R
Sbjct: 296 EELEEGPNKTLFKKLIKKMGSR 317
>gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
M23864:W1]
gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
M23864:W1]
Length = 332
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHV 65
+++KV + I S + + D +L+ SGGKR+RP+ + ++ + + +N
Sbjct: 19 INNEIKKVEDRLQHAIKSSDQTLEDAAFHLLSSGGKRVRPVFVILSSQFGDSKDTSENTY 78
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A A+E IH ATL+HDDV+D S RRG+ W T++L G+FLL+ + E K
Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIK 138
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+S + +GEL Q N D +YL I KTA+L A EV +L +
Sbjct: 139 DSRVHNIISKSIVDVCKGELFQFQDQFNSDQNITNYLRRINRKTALLIQLATEVGALTSN 198
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L
Sbjct: 199 ASDEVVRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + K + + + +R ++++ +++ + Y KA + L D+
Sbjct: 256 RKDQAFKQKVADLNPESPQSAFDECIETIRTSQSIEESKVISEKYLNKAIKLIDELEDNP 315
Query: 306 WKKSLMEVVDFCLQR 320
K +++ R
Sbjct: 316 NKALFRKLIKKMGSR 330
>gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
Length = 332
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 4/312 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
K+N + + +Y++ GKR+RP LTL + + +N + +A I
Sbjct: 19 AKINEALAACFPKQSPETLYAPARYILEGKGKRIRPFLTLLASEAVSGSSENALGVALGI 78
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H TL+HDD++D + LR G+ W ++L GD +++ A+ + ++ S E
Sbjct: 79 EVLHNFTLMHDDIMDAADLRHGRPTVHKQWDVNAAILSGDMMIAYAYELALKAISSRHAE 138
Query: 132 ALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + T+ EG+ + L + DVT DYL +I KT L SAALE +
Sbjct: 139 MIHIFNDANITICEGQALDMELEQRKDVTIADYLDMISKKTGRLISAALEAGGVAGNGTP 198
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
AL ++G +G AFQ+ DD LD + GK G D NGK T ++ + +
Sbjct: 199 EQIAALVTFGEKIGRAFQIQDDYLDIMAGDGKSGKVPGGDVINGKKTWLLLRSLELAEGA 258
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ +S ++ S EN+ I + L +T + + A D+L LP +
Sbjct: 259 DRELLQSIFDNNGTSPENVPAVKAIFEQCGVLEETRAKINEDTEAALDALESLPFEEGRG 318
Query: 309 SLMEVVDFCLQR 320
L + ++R
Sbjct: 319 YLRGFANILMKR 330
>gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
Length = 325
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ +++ L + ++ V++++ GKR+RPML L A
Sbjct: 4 LTLIKQPISSELDTFINLFNDSLSHADGLLGQVLEHIRKRAGKRMRPMLILLMAKNFGEV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TEVTQRATVGLELLHTASLVHDDVVDESGERRGQASVNASYNNKVAVLVGDYILSTALLN 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T Q + L+ + TL+ GE+ QL+ +N +++EE Y VI+ KTA LF A +
Sbjct: 124 VSLTGDQAIITYLAQLGRTLSNGEILQLTNIRNQEISEEVYYQVIRQKTAALFEACAGMG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G +A + +G NLGI FQ+ DD+ D + +GK G D GK TLPVI
Sbjct: 184 AMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD-YYDSEAIGKPTGNDMAEGKLTLPVIH 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A + E + +G ++ + + + N + E R + + + +
Sbjct: 243 ALRTTGDEEMRALAMKVKEGSVTKGEIDELVAFAKRNGGIEYAERRMGDFHAECMEFIGS 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ D + ++L ++F ++R +
Sbjct: 303 HVTDGAIGEALKAYLNFVIERKS 325
>gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
49726]
gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
49726]
Length = 334
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + ME V + + + D V +L +GGKR RPM+ L + G
Sbjct: 17 QLNERIGAGMEAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGC 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 EEVIKSATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + V Y+ VI+ KTAVL ++A + +
Sbjct: 137 SQLDTHTVGHFADTFEELVTGQMRETIGAGEANPVD--HYMAVIQEKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G AL G +G+ FQ+VDDV+D + + GK G D R G TLPV+ A
Sbjct: 195 YHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + +++A ++R++ +Y + ++ L L
Sbjct: 255 LEEDGEVGDQLRELLTGPLE-TDAEVERAIELLRQSGGRQRALEDINAYLRTVEEQLSVL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++S ++L ++ D+ ++R+
Sbjct: 314 PENSASQALRQLADYTVRRV 333
>gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus
P2]
Length = 332
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 174/316 (55%), Gaps = 10/316 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E
Sbjct: 16 NVNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEI 75
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKS 126
+H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E
Sbjct: 76 LHNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFESLNESLKGLDGNTF 135
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+A ++EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I
Sbjct: 136 YKAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKA 195
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T
Sbjct: 196 NDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEAT 255
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS- 305
+ EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P S+
Sbjct: 256 EDEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNK 314
Query: 306 -WKKSLMEVVDFCLQR 320
+K+L + F +QR
Sbjct: 315 TAEKALKYLAQFTIQR 330
>gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus P2]
gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus 98/2]
gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase
gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus P2]
gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2]
Length = 332
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 174/316 (55%), Gaps = 10/316 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E
Sbjct: 16 NVNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEI 75
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKS 126
+H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E
Sbjct: 76 LHNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTF 135
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+A ++EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I
Sbjct: 136 YKAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKA 195
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T
Sbjct: 196 NDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEAT 255
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS- 305
+ EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P S+
Sbjct: 256 EDEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNK 314
Query: 306 -WKKSLMEVVDFCLQR 320
+K+L + F +QR
Sbjct: 315 TAEKALKYLAQFTIQR 330
>gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Corynebacterium jeikeium ATCC 43734]
gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Corynebacterium jeikeium ATCC 43734]
Length = 336
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + + M++V L+ R+ + D + +L +GGKR R M L A E
Sbjct: 18 QLNEALGQSMQQVEQLLKDRLSVGESFLTDKISHLFEAGGKRFRVMFALLAAHYGEKPTA 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A +E H ATL HDDV+D+S RRG +A W N ++L GD+L + A ++
Sbjct: 78 QEVHEAAAVVELTHLATLYHDDVMDESDQRRGAESANKRWNNSVAILAGDYLFAIASEIM 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+Q L G++R+ +++ + E YL VI+ KT VL ++A + +
Sbjct: 138 ATLGAQTVQHFAETFQE-LVTGQMRETIGARDGEDEIEHYLTVIQEKTGVLIASAGWLGA 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G R+AL +G N+G FQ+VDD++D + GK G D R G TLPV+ A
Sbjct: 197 LHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWADPEVSGKQPGTDLREGVFTLPVLYA 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+ + + +A ++R + + Y Q +D L L
Sbjct: 257 MQQDDATGARLREILTG-PVTDDALVDEALELIRGSEGREKSFEVVQRYRQYGEDELAKL 315
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++ ++L ++DF L+RL
Sbjct: 316 PENQVTQALRHLMDFALERL 335
>gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
Length = 353
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + + M++V L+ R+ + D + +L +GGKR R M L A E
Sbjct: 35 QLNEALGQSMQQVEQLLKDRLSVGESFLTDKISHLFEAGGKRFRVMFALLAAHYGEKPTA 94
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A +E H ATL HDDV+D+S RRG +A W N ++L GD+L + A ++
Sbjct: 95 QEVHEAAAVVELTHLATLYHDDVMDESDQRRGAESANKRWNNSVAILAGDYLFAIASEIM 154
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+Q L G++R+ +++ + E YL VI+ KT VL ++A + +
Sbjct: 155 ATLGAQTVQHFAETFQE-LVTGQMRETIGARDGEDEIEHYLTVIQEKTGVLIASAGWLGA 213
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G R+AL +G N+G FQ+VDD++D + GK G D R G TLPV+ A
Sbjct: 214 LHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWADPEVSGKQPGTDLREGVFTLPVLYA 273
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+ + + +A ++R + + Y Q +D L L
Sbjct: 274 MQQDDATGARLREILTG-PVTDDALVDEALELIRGSEGREKSFEVVQRYRQYGEDELAKL 332
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++ ++L ++DF L+RL
Sbjct: 333 PENQVTQALRHLMDFALERL 352
>gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix]
Length = 318
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 16/319 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIE 72
++ I+ + + + +LI +GGKRLRP++TL TA ML + LA +IE
Sbjct: 3 IDHYIMDFMSITPDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIE 62
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
HT +L+HDD++D +RRG +V+G+ ++L GD L + AF M+ +++
Sbjct: 63 TAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHE 122
Query: 133 LSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A ++ G+ + + DV DYL++++ KT L AA + ++ A
Sbjct: 123 QAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAA 182
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + + + + GMN GIAFQ+ DD+L G+ GK + D R GK TL VI A ++
Sbjct: 183 GAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKK 242
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+RE K S ++LK+A I+ ++ AL E RA Y ++A+D L +P
Sbjct: 243 AGRREIVDLI----GPKASEDDLKRAASIIVDSGALDYAESRARFYVERARDILSRVPAV 298
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D+ K+ L ++D+ ++R+
Sbjct: 299 DAESKELLNLLLDYIVERV 317
>gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 323
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 166/322 (51%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++M+ L + ++ +++++ GK +RP+LTL A
Sbjct: 4 LTQIRKPVEREMKDFESLFGITLQHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A ++E +HTA+L+HDDVVD+S +RRG+ + + N+ +VLVGD+LLS A
Sbjct: 64 NDSVLHAAVSLEMLHTASLVHDDVVDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALKH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ ++ + TL++GEL+QLS K+ +++E Y +VI+ KTA LF+ EV
Sbjct: 124 AAMAGDLRVVDLVARLGQTLSDGELQQLSNVKSDEISENQYFNVIRRKTASLFAVCAEVG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L++G + L +G +GI FQ+ DDV DY GK G D + GK TLPV+
Sbjct: 184 ALLSGASEDEIRRLGEFGTYVGICFQIRDDVFDYYDAEV--GKPTGNDMKEGKLTLPVVH 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G+ + E + +++ + + + ++A +
Sbjct: 242 AVLQPGAETWHETALKVRAGRATEEEISALVDFTKQSGGIEYARRKMDEFREQAIGLIGS 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + ++L +DF L+R++
Sbjct: 302 DGNEAVGEALRLYLDFVLKRVS 323
>gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
Length = 326
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 8/327 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MK K+ + VN + ++ + + + D +LI GGKRLRP + + + +L +
Sbjct: 1 MKK-TKQIEKNAKTVNKYLKSKLKGNPKKLYDAAGHLIVHGGKRLRPYMVIRSCQILGGK 59
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N + A A+E +H TL+HDD++D+ +R G +G ++L GD L S+A+ +
Sbjct: 60 SSNAMPAASAVEMVHNFTLVHDDIMDNDEMRHGVPTTHRKYGMPIAILAGDVLFSKAYQV 119
Query: 121 VIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ +TK + A ++ + + T+ Y+ +I KTA LF
Sbjct: 120 ISDTKLSPTATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKKTAALFD 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + ++ A + L S+G NLGIAFQ+ DD++ G+ K +G D R GK
Sbjct: 180 VSCAMGAICATNKGKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKKPVGNDLREGKK 239
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+LP+++A + ++K + KIS +L KA ++R +A Y +KA
Sbjct: 240 SLPILMAIKLAKGKDKKIILKAFGNSKISRNDLNKAVDVIRSLGIEDSVRRQALKYAEKA 299
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ SL S K L+ ++DF ++R
Sbjct: 300 EKSLSKYSGS-AKTELIALLDFVVKRS 325
>gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group]
Length = 463
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 127 ELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSD 186
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + + GN+ S
Sbjct: 187 STEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLS 246
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + + YL
Sbjct: 247 VLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTY 306
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 307 YKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 366
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E ++ G + N++ A ++++R + T+
Sbjct: 367 TDIRHGIITAPMLYAM-----EEFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKEL 421
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + +A ++ LPDS +++L+++ + + R
Sbjct: 422 AREHANRAIKAIEALPDSDDEDVLTSRRALIDITERVITRT 462
>gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group]
gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group]
gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group]
gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group]
gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group]
gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 430
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 94 ELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSD 153
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + + GN+ S
Sbjct: 154 STEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLS 213
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + + YL
Sbjct: 214 VLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTY 273
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 274 YKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 333
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E ++ G + N++ A ++++R + T+
Sbjct: 334 TDIRHGIITAPMLYAM-----EEFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKEL 388
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + +A ++ LPDS +++L+++ + + R
Sbjct: 389 AREHANRAIKAIEALPDSDDEDVLTSRRALIDITERVITRT 429
>gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 12/316 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHV 65
ME++ + I ++ + +GGKRLRP+L A + D
Sbjct: 1 MEQLRLNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAELMHMSDITDRQR 60
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA E IHTA+L+HDDV+DD RRGK ++G + ++L GDFL +Q+ +
Sbjct: 61 RLAEITEMIHTASLVHDDVLDDCDTRRGKETIHTLYGARVAILAGDFLFAQSSWFLANLD 120
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ E ++ +S V A+GE+ Q N D+T ++YL +KTA L +A+ + +++ +
Sbjct: 121 NLEVIKLISQVIADFADGEISQAGALFNCDLTLDEYLEKSHNKTASLIAASCKSAAVFSE 180
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V SV+ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G T P I A +
Sbjct: 181 VTESVKVDMYEYGKHLGLAFQVVDDILDFTQSEEQLGKPQGQDLASGNLTAPTIFALRAK 240
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++ I + +L++A I+ E L + + A G A SLR LPDS
Sbjct: 241 PEL-----RALIETQFENEGDLQRAIEIVNEFG-LEEAQKLAKREGDIALASLRQLPDSE 294
Query: 306 WKKSLMEVVDFCLQRL 321
K+SL+ +V + L+R+
Sbjct: 295 AKRSLVGMVGYVLERI 310
>gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 323
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 167/316 (52%), Gaps = 2/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + +++ N ++ E++ + ++YL+ GK++RP+L + A + D+
Sbjct: 8 KKVISNELKIFNDKFSLSFFAEDELLHNALQYLMPQKGKQIRPILVILGAKLCGEVTDDT 67
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
L+A A E +H+A+L+HDDV+D+S RR K + ++ N+TSVLVGD+L++++F + T
Sbjct: 68 YLIAAAYELLHSASLIHDDVIDNSLQRRNKPSLNKIFDNKTSVLVGDYLMTKSFNYIYHT 127
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
E + L ++ + GEL Q S E++Y VIK+KTA LF+ L+ +L A
Sbjct: 128 YKMEQIGLLQKLSIDIIRGELLQQQYSH-SIPKEKEYYSVIKNKTAALFATCLQAGALSA 186
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ S G NLG+ FQ+ DD+ DY + +GK I D GK TLP++ A +
Sbjct: 187 NGTTQQLDDMYSIGENLGMCFQIKDDIFDYSANAS-LGKPIFNDITEGKVTLPLLHAVRS 245
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
++E+ +N + +++ + I+ + + + +E + + + A + L DS
Sbjct: 246 ADEKERINVIDILNKDNVDIDDKTFIYNIVTKYKGIDYSERKMKDFCRLALEKLDVFEDS 305
Query: 305 SWKKSLMEVVDFCLQR 320
+K L ++ F R
Sbjct: 306 EYKTFLSGIISFTADR 321
>gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1]
gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1]
Length = 331
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 178/322 (55%), Gaps = 4/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
++ + +D ++ + + S V+++ V K++I +GGKR+RP++TL TA ML + +
Sbjct: 10 DIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQS 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F ++
Sbjct: 70 QQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLL 129
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++
Sbjct: 130 VGFNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I
Sbjct: 190 LL-QGREEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKT 248
Query: 242 FQRGTKREKNFWKSTINDGKISV--ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + ++++ +++ + AL + RA + A+ +L
Sbjct: 249 LEFLEHSNPAMYDKLRIAVQTGKVVDDVQMLIKLVQSSGALDYCKARALEETKNAQHALN 308
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP++ +++ L + + RL
Sbjct: 309 NLPNNRYREGLYLLTELASSRL 330
>gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
Length = 324
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++E L + S ++ VV ++ GK +RP+L L A + +
Sbjct: 4 ISLIRTPIEAELEAFKKLFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYDVV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ +
Sbjct: 64 RPSTLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLTGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+TKS + +SL+ LA+GEL QLS N +E Y VI+ KTA LF+A + +
Sbjct: 124 AEQTKSHLIIRLVSLLGQDLADGELLQLSNVSNHSFSESVYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + G +GI FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVDANEEEAEFARLLGEYIGICFQIKDDIFDYF-NSKEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ DG + + + + ++EN + Y +KA L
Sbjct: 243 VLNNTKDDTAREIAIKVKDGTATPDEIARLIAFIKENGGIEYAIQTMNLYKEKALGLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +L +++ + R
Sbjct: 303 LPDSDVCTALRAYLNYVVDR 322
>gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
44963]
gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
44963]
Length = 329
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 167/322 (51%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L D++ V+ +R S + ++ + + + GKRLR LTL + YR
Sbjct: 7 LSRLFAGIQADLDTVDKTFQERATSGLTILNSASMHALGAPGKRLRTALTLLAGKLNTYR 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +LL+ A E H ATL+HDD+VD+S+ RRG ++G++ ++L+GD+ ++ +
Sbjct: 67 FEKLLLLSVAFEMTHLATLIHDDIVDESSTRRGNPTVNALFGDKIAILLGDYYFAKTAGL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + S T+ EG + ++ + N+D+++E Y +SKTA L +A +
Sbjct: 127 IADIEDPRIDHLFSDTVATVCEGTILEMMTAGNIDLSKETYYEKTRSKTACLMAACSKGG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+G + L +YGM+LG AFQ++DD+LDY + + +GK G D R G TLP+I
Sbjct: 187 AIISGATPEEIELLYAYGMHLGTAFQIIDDILDYTQDQSTIGKPAGNDLRQGMVTLPLIY 246
Query: 241 AFQRG-TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q K+ + + E + + + + + + A++ KA+++L
Sbjct: 247 ALQDAPQNGHYQQVKTLLGEKTHKDEEISEIVEWVTQGNGVKLSLLDAHAQANKAREALY 306
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P S + L E++DF L R
Sbjct: 307 HFPASPDRDVLDELIDFVLMRK 328
>gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG7H23]
Length = 328
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 165/321 (51%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEY 59
+K + + ++++V ++ + V+ Y + SGGK+LRP LTL +A +
Sbjct: 9 IKYIYEPIQAELDRVVEMLRGIAPQAGSSLKQGVLDYAVMSGGKKLRPALTLLSAQFHPH 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+++A A+E +H A+L+HDD VD S +RRG+ WG + +V++GD+L + +
Sbjct: 69 DPTAPIIMATAVELLHIASLVHDDTVDSSTIRRGRATVSSRWGGKVAVMLGDYLFATSAT 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V +T + S LA GEL + N D T DY KTA LF A E
Sbjct: 129 YVCDTGDIRVIRRFSEAIMELARGELSEHFSLHNWDQTVADYEERTYDKTASLFCTASEC 188
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++++G S QALK+YG +LG+AFQ++DD+LD++G E+GK +G D G TLP +
Sbjct: 189 GAVLSGASESHCQALKAYGYHLGMAFQIMDDILDFQGTEAELGKPVGNDLLQGTITLPAL 248
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + G E+L++ ++R + A+ +T A YG +A ++L
Sbjct: 249 ---FFAQRYPDESVLERLKKGGTDQEDLRQMVEMVRNSPAIDETLAVADRYGHQALEALG 305
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L + + SL E+ + R
Sbjct: 306 QLAPNQARSSLKELASYITSR 326
>gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
Length = 277
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 114/277 (41%), Positives = 167/277 (60%), Gaps = 1/277 (0%)
Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
LRP+L + +A L Y+G H + A IEFIHTATLLHDDVVD+S +RRGK A +GN
Sbjct: 1 LRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNA 60
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TEE Y+ V
Sbjct: 61 ASVLVGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQV 120
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
I SKTA LF +A ++ +++ V AL++YG LG AFQL+DDV+DY + +MGKN
Sbjct: 121 IYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKN 180
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G+D GKPTLP++ A + T + I +E L + +M+E +L T
Sbjct: 181 VGDDLAEGKPTLPLLHAMRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTT 239
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A KA L LP+S +K++L+ + ++R
Sbjct: 240 QKALEEADKAIAELEVLPESEYKEALITLAHVAVKRT 276
>gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 322
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 170/313 (54%), Gaps = 3/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V ++ KRI + + I +++ +I++ GK LRP + EY + + L
Sbjct: 11 IKSELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDREKILPL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +H ATL+HDD++D++ +RR K + +G +V +GDFL S++F ++ + +
Sbjct: 71 AAAIEMLHMATLVHDDIIDNALIRRSKPTIQAKYGKDYAVFIGDFLFSESFLLLSDNITV 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L+ +S V + +GE+ Q N+ +T DYL I +KTA LF+ + V + +
Sbjct: 131 SNLKKVSKVVSKICKGEIGQFESRHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
S+ +AL S G N+G+AFQ++DD+LDY G+ +GK++G D + G TLP K
Sbjct: 191 ESLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKSLGNDIKEGVFTLP---LIYSLDK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + S +++++ +++N + ++ A Y +KA D + L DS K
Sbjct: 248 NKDKKILELLKKESYSDDDIQQIIEFVQQNGGIDKSKMLAQKYTEKAFDKISMLKDSPPK 307
Query: 308 KSLMEVVDFCLQR 320
+ L+EV L R
Sbjct: 308 QVLIEVTGKLLYR 320
>gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC
19977]
gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
abscessus]
Length = 328
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ + LI+ + ++ + V +L +GGKR RP+ T+ A + D +L
Sbjct: 15 VRDHLAAIETLIVSELGQSDPLLTESVLHLFHAGGKRFRPLFTVLAAQTGPDPDNDEVIL 74
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
E IH ATL HDDV+D++ RRG +A WGN ++L GD+LL+ A +V
Sbjct: 75 AGAVCELIHLATLYHDDVMDEAQKRRGVPSANARWGNNVAILAGDYLLATASRLVSRLGP 134
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L G++R+ E YL VI KT L +AA ++ +
Sbjct: 135 TAVRIVAET-FAELVTGQMRETVGVPEGGDETEHYLKVIHEKTGSLIAAAGRFGAMTSRC 193
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L G +G AFQ+ DD++D +E GK G D R G TLP++ A +
Sbjct: 194 DDDQIERLSRLGAIVGTAFQISDDIIDIESLTDESGKTPGTDLREGVHTLPMLYALRDTG 253
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + +++A ++R + L + Y +AK L LP
Sbjct: 254 PD-ADRLRVLLAAPITDDAEVEEALALLRASEGLAQAKSVVIDYADRAKAELVELPPGDA 312
Query: 307 KKSLMEVVDFCLQR 320
+ +L ++++ ++R
Sbjct: 313 RDALGVLIEYTVRR 326
>gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
DSM 44702]
Length = 338
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 5/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D + M +V + + + + D V++L +GGKR RPM L +
Sbjct: 18 ALNDFIAEGMTRVESTLQDSLSTGESFLTDKVQHLALAGGKRFRPMFALLASRYGSTPET 77
Query: 63 NH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
V A +E H ATL HDDV+D++ RRG +A W N ++L GDF+ + A
Sbjct: 78 AAQTVVNAAVVVELTHLATLYHDDVMDEADRRRGSESANARWDNSVAILAGDFIFAVASS 137
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + + L G++R+ + + Y+ VI+ KT VL ++A +
Sbjct: 138 IMADLGPETVRHFAETFGE-LVTGQMRETVGCPEGEDPVDHYMTVIQEKTGVLIASAGFL 196
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+ G R AL +G +LG FQ+VDD++D + E GK G D R G TLPV+
Sbjct: 197 GSMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSDPEESGKTPGTDLREGVFTLPVL 256
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + T + + +A ++R + + Y + L
Sbjct: 257 YAMREQTPGGERLRDILTG-PVTDDALVDEALTLIRASDGRERSLADVERYRDLGEAELA 315
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP++ +L ++++ L RL
Sbjct: 316 LLPENPVTTALRRLMNYSLARL 337
>gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5]
Length = 373
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
+ + ++E + + ++ ++ E++ D+++Y + S GK +RP+L L +A M
Sbjct: 48 LDTIRKPVTAELEAFDEFVDRQFTAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSPV 107
Query: 60 ----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+G L A +E IH A+L+HDDV+D++ +RRGK +A W + +V++GD++L+
Sbjct: 108 AEAAKGRRVHLAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYILA 167
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + + + + + + L EGE+ Q ++ +T + YL +I KTA L
Sbjct: 168 RNLSIGLTSGQFDLVTHVCGSMAALCEGEVLQSECAEKHTMTRQAYLDIIYKKTACLIGV 227
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ ++ G ++ +G +G+AFQ+ DD+LDY GK D R GK T
Sbjct: 228 SASAGAMAVGASQQKVALMRRFGEAVGMAFQIQDDILDYTRTA-HTGKPANNDLREGKIT 286
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP++ + + + E+++ + L SY +A
Sbjct: 287 LPLLAVLDKAPAERRTELLGRLACCHDDEESVEYLQRTVENEGGLTFAAEVMRSYIARAV 346
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ L S ++ +L + + +R
Sbjct: 347 EMLSEYEASDYRTALANLCAYIAER 371
>gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1]
gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169]
gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1]
gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8]
gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7]
gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72]
gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E]
Length = 348
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 178/322 (55%), Gaps = 4/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
++ + +D ++ + + S V+++ V K++I +GGKR+RP++TL TA ML + +
Sbjct: 27 DIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQS 86
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F ++
Sbjct: 87 QQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLL 146
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++
Sbjct: 147 VGFNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAA 206
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I
Sbjct: 207 LL-QGREEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKT 265
Query: 242 FQRGTKREKNFWKSTINDGKISV--ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + ++++ +++ + AL + RA + A+ +L
Sbjct: 266 LEFLEHSNPAMYDKLRIAVQTGKVVDDVQMLIKLVQSSGALDYCKARALEETKNAQHALN 325
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP++ +++ L + + RL
Sbjct: 326 NLPNNRYREGLYLLTELASSRL 347
>gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium
sp. P08]
Length = 324
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
DL + + + ++ +D + + ++I +GGKR RP+L + + E
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVAEAANHIISAGGKRFRPLLVVLCSQFGHEAD 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 EADLVRAAVVVELTHVASLYHDDVMDEASKRRGAPSANLRWGNSVAIMVGDYLFSKASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + + L +G++ + + YL V+ KT L + +
Sbjct: 127 VA-ELGVDFVRLQARTFSRLVQGQIAETRGPSQGEDPLAHYLKVVADKTGSLIATSAVFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVTALEQFGEDIGEVFQLADDLIDVT--STATGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
G + K D L +R N + + +A+ L
Sbjct: 244 LRASGDPADAELKKMLDAD-LSDDAVLADVLEQLRANHVIEEARAEIQRRADRARTHLAP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGEAKQALDALCDEVVSRSS 324
>gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
Length = 365
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
DL + + + ++ +D + + ++I +GGKR RP+L + + E
Sbjct: 48 SEFTDLVSAKLALIEDELGRQAGADTPFVAEAANHIISAGGKRFRPLLVVLCSQFGHEAD 107
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 108 EADLVRAAVVVELTHVASLYHDDVMDEASKRRGAPSANLRWGNSVAIMVGDYLFSKASLA 167
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + + L +G++ + + YL V+ KT L + +
Sbjct: 168 VA-ELGVDFVRLQARTFSRLVQGQIAETRGPSQGEDPLAHYLKVVADKTGSLIATSAVFG 226
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 227 AMVSHASAENVTALEQFGEDIGEVFQLADDLIDVT--STATGKTPGTDLREKVPTLPTLL 284
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
G + K D L +R N + + +A+ L
Sbjct: 285 LRASGDPADAELKKMLDAD-LSDDAVLADVLEQLRANHVIEEARAEIQRRADRARTHLAP 343
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 344 LPDGEAKQALDALCDEVVSRSS 365
>gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
9343]
gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_16]
gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
9343]
gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_16]
gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
638R]
Length = 324
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E L + S ++ +V+ ++ GK +RP+L L A +
Sbjct: 4 LSLIKSPITTELEDFKNLFDSSLSSSNLLLNNVIAHIRQRNGKMMRPILVLLVAKLYGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VLVGDFLL+ +
Sbjct: 64 KPETLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLVGDFLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T++ + + ++ + LAEGE+ QLS N + +E Y VI+ KTA LF+A + +
Sbjct: 124 AERTRNHDIIGVVACLGQDLAEGEILQLSNVSNREYSETIYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L V + + + +G N+GI FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVEVTDEKAEFARLFGENIGICFQIKDDIFDYFES-KEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
T + G +V+ + + +++N + Y Y ++A D LR
Sbjct: 243 VLNTTTDAWAQEMALRVKAGTATVDEITRLIEFIKQNGGIEYAVKVMYEYKERALDLLRT 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ K SL+ +D+ + R
Sbjct: 303 LPDSAVKTSLITYLDYVVDR 322
>gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
33209]
gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
33209]
Length = 375
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 2/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ KV + + I + + ++LI +GGKR+RP+L L A + + +
Sbjct: 61 IYNNLAKVEKQLREAIANSDPLADATSRHLIEAGGKRIRPLLVLLAAHLGDSSRPEVIRA 120
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + RRG A VWGN ++L GD + ++A +V E +
Sbjct: 121 AVVVELTHLATLYHDDVMDSAPFRRGAPTAHEVWGNSVAILTGDLIFARASILVSELGPR 180
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G+L + + + + Y+ V+ KT L SA+ ++ ++ A V
Sbjct: 181 ALGIQARTFER-LCLGQLHETVGPRPDEDPVDHYISVVSDKTGSLVSASGQLGAIFAEVP 239
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ L YG +G+AFQL DDV+D G GK G D R PTLPV+L + +
Sbjct: 240 EPIQDVLVEYGEKVGVAFQLADDVIDVTGLKQVSGKAPGTDLRERVPTLPVLLLRKAAST 299
Query: 248 REKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ DG + S E L A +RE+ ++ A + +A +L LP+
Sbjct: 300 DPSAAAVLELVDGDLSSDEALAAAVTALREHPVTEESWVVARRWADEAVAALAPLPEGVV 359
Query: 307 KKSLMEVVDFCLQR 320
K +L + R
Sbjct: 360 KSALANFALAVVNR 373
>gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Halogeometricum borinquense DSM 11551]
gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Halogeometricum borinquense DSM 11551]
Length = 348
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 94/341 (27%), Positives = 165/341 (48%), Gaps = 24/341 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+ + D E VN + + + +D E + + +YL+ +GGKRLRP +TL TA L
Sbjct: 8 ERVLDAVKARRELVNDALDEDVPMADPERLYEATRYLLEAGGKRLRPTVTLLTAEALADA 67
Query: 58 -------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ + + A +IE I + TL+HDD++DD LRRG A + +
Sbjct: 68 EPLSEDYRSFPALDGADIDVMAAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDTE 127
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEE 159
T++L GD L ++AF + +T + L+ + EG+ + + +V +
Sbjct: 128 TAILAGDTLYAKAFEFMTQTGADPQNGLEAVRLLATTCTKICEGQALDVEFERRTEVLPD 187
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+YL +++ KTAVL+ AA + ++ G + +AL YG++ G AFQ+ DDVLD
Sbjct: 188 EYLEMVELKTAVLYGAAAATAGVLMGADDETVEALYRYGIDSGCAFQIQDDVLDLTVPSE 247
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
++GK G D K TL + A Q+G E T+ ++ +++ A + + +
Sbjct: 248 KLGKQRGSDLVENKETLITLHARQQGVNVEDLVAADTVEG--VTEDDIDAAVAELNKVGS 305
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +A +AK L LPD+ + L ++ D+ + R
Sbjct: 306 IDYARDKAQELTDRAKRHLEVLPDNDARSLLADISDYLISR 346
>gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
ATCC 43541]
gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
ATCC 43541]
Length = 349
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
+ D+ D+E + + + I S+ ++ D+ +L+ SGGKRLRP L L A +
Sbjct: 27 NDMFDVIQADLEMLELTLTEAIASETALVTDIGTHLVSSGGKRLRPALFLVAARGGTSFD 86
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
+ +A A+E +HTA+L+HDDV+D++ RRG A WGNQ ++L GD++ ++AF
Sbjct: 87 PARAMPIAAALELVHTASLVHDDVIDEADTRRGAATANAKWGNQIAILTGDYIFARAFKL 146
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + L+ + CTL+EGE+ Q + E Y I+ KTA E+
Sbjct: 147 IAEKGYDSSIYVKLAQLVCTLSEGEILQDHTVYQVPKDESAYYERIRKKTADFLEICCEL 206
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++I G+ + YG LG+AFQ+ DD+LD+R +GK G D G TLPVI
Sbjct: 207 GAMIGGMSADDTARMAQYGQALGMAFQITDDLLDFRQTSEHIGKPAGHDLAQGYVTLPVI 266
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL- 298
A + + + + K++ E + +A I+R L + +A +Y ++AK+ L
Sbjct: 267 RALSVLDAHGRAELTALVTNPKMTEEEVARALDIVRMTDGLDYAQTQADAYLERAKNVLP 326
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L D +++ + DF +R
Sbjct: 327 EKL-DERVRETCLMAADFIGRR 347
>gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1]
Length = 309
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 167/302 (55%), Gaps = 3/302 (0%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLL 80
+ S V+++ +V +++I +GGKR+RP++TL + + + + + + LA E +HTATL+
Sbjct: 8 SLNSKVQLVMNVSQHVINAGGKRMRPLITLLCSRLCKDEQSKDAMHLAAITEMLHTATLV 67
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDV+D+S +RRG+ A W N T+VLVGD+L+++AF +++ +S L+ S C +
Sbjct: 68 HDDVIDESGMRRGRPTANATWDNPTAVLVGDYLIARAFNLLVGFQSLPLLQLFSDGTCDI 127
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
AEGE+ QL N + TE DY+++I K I + Q +G +
Sbjct: 128 AEGEVLQLQHQHNPEATETDYMNIIDGK-TSRLFMMATAGVAILQDKPEFMQPFSDFGQH 186
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I+A + + +
Sbjct: 187 FGNAFQIIDDVLDYSGDSEVMGKNLGDDLAEGKPTLPTIVALRLLKQSNAADYDKLRIAV 246
Query: 261 KISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ E+ +++++ AL RA + A+ +L LPD+ ++K L ++
Sbjct: 247 QTGKVEDAASLIKLVQDSGALEYCRNRALEETRLAQQALAQLPDNEYRKGLWQLTQLASS 306
Query: 320 RL 321
RL
Sbjct: 307 RL 308
>gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
USDA]
gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
USDA]
Length = 318
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 175/319 (54%), Gaps = 3/319 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + L K++ VN +I ++ SDV+++ +KY + GK++RP++TL + +L YR
Sbjct: 3 LKFIFKLIKKEISSVNKIIFDQLRSDVQLVNRFIKYFNQNSGKKIRPIITLLFSKILGYR 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G ++ A IEFIH ATLLHDD++D S +RRG+ + +V+GN+ SVLVGDF+ +++ M
Sbjct: 63 GKKDIIAASLIEFIHIATLLHDDIIDSSIIRRGRKKSSIVFGNEISVLVGDFVYAKSLKM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ S++ L +S + EGE+ QLS ++ L++++E Y+ +I KT+ LF A +
Sbjct: 123 IVGLNSKKVLNLISKTVHMIIEGEILQLS-NRTLEISQETYMKIIYQKTSSLFETAAYIL 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ I V + + ALK+YG + G AFQL++D+ DY+ N + + +
Sbjct: 182 TFICNVDSDKKIALKNYGRHFGNAFQLINDIKDYQNCSNNFISKGNDLNDGNFTLPLIHV 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K K S+ L++ +M+ +L + A S + A SL
Sbjct: 242 MQKVSKKESMEIKKVIQEGKGRSI--LRRISFLMKRYGSLEYSRKIAESEIKIAIQSLDH 299
Query: 301 LPDSSWKKSLMEVVDFCLQ 319
SS+K +L+++ +
Sbjct: 300 FKCSSYKTALIKLTTSIID 318
>gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 306
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 4/306 (1%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
+L S V I + ++L+ +GGKR RP+L + A + V A +E H AT
Sbjct: 1 MLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLAT 60
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ +
Sbjct: 61 LYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRASQILAGLGPEAVRIQAEAFER 120
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L G++ + + ++ + YL V+ KT L + A ++++G + V + L YG
Sbjct: 121 -LVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYG 179
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFWKS 255
LG+AFQL DDVLD + +E GK G D R G TLPV+ +R ++ E +
Sbjct: 180 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERIARQGLAEDVALDT 239
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ L +A +MR + AL A Y A+ +L+ LPD+ + SL ++ D
Sbjct: 240 LLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATLQALPDTPARTSLADLCD 299
Query: 316 FCLQRL 321
+ R+
Sbjct: 300 AVVHRV 305
>gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 334
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + ME V + I + + D V +L +GGKR RPM+ L + G
Sbjct: 17 QLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGC 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 EEVVKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + + + + V VI+ KTAVL ++A + +
Sbjct: 137 SELDTHTVGHFADTFEELVTGQMRETIGAGEANAVEHYT--AVIREKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G AL G +G+ FQ+VDDV+D + E GK G D R G TLPV+ A
Sbjct: 195 YHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + S +++A ++ ++ +Y + ++ L L
Sbjct: 255 LEEEGEVGDKLRELLTG-PLHSDAEVERAIELLHQSGGRQKALEDINAYLRTVEEQLAVL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++S ++L ++ D+ ++R+
Sbjct: 314 PENSASQALRQLADYTVRRV 333
>gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
Length = 318
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 12/323 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M+ + K E VN I K + + ++LI +GGKRLRP+L+L +E
Sbjct: 1 MIVEEIKKRAEIVNDEIKKFLPVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAIERDY 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A AIE +H TL+HDD++D+ LRRG ++G T++L GD L ++AF ++
Sbjct: 61 RKILPAAVAIEVVHNFTLIHDDIMDEDELRRGVKTVHTIYGVPTAILAGDTLFAEAFKIM 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK----SKTAVLFSAAL 177
+ + + E+ + E K + A
Sbjct: 121 SYCEVESENLVNGMRKLAEVCVEICEGQQMDIEFEEREFVSEEEYLEMVRKKTSVLIALS 180
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
I + +AL +YG+N GIAFQ+ DD+LD G+ +GK+ G D GK TL
Sbjct: 181 SSIPAILFGEKKYEKALWNYGINAGIAFQIKDDILDLLGKEK-IGKDWGSDLVEGKKTLI 239
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VI AF+ G + E GK +E +++ + E A+ E +A Y KA++
Sbjct: 240 VIKAFEEGVELES------FGKGKAEIEVIERDVKKLIECGAIEYAENKALEYLNKAREE 293
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L+ L ++ +K L + +F ++R
Sbjct: 294 LKVLKNNEGRKLLEALAEFFVKR 316
>gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 322
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 105/321 (32%), Positives = 166/321 (51%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L + KVN + + M+ V +++ +GGKRLRP+L + A L
Sbjct: 1 MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRG 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD+ LAC++E +H+ATLLHDD++DD+ALRRG AA ++G+ ++L GD LL+ A +
Sbjct: 61 GDDIYPLACSVELLHSATLLHDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E ++ A GE+ ++ ++ +E Y+ +IK KTA + A+ ++
Sbjct: 121 VSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQETYIEIIKGKTAWMIQASCQLG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ AG QA +GMNLGIAFQ+VDD LD+ E GK + D R GK T P+ +
Sbjct: 181 AIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+R ++ + G S ++ +R T A +Y +KA D+L
Sbjct: 241 YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHM 300
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L +S K L + VD+ R
Sbjct: 301 LDESREKTVLRQTVDYVKNRS 321
>gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
Length = 316
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 135/316 (42%), Positives = 192/316 (60%), Gaps = 5/316 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ +I +R+ S V ++ V +Y+I +GGKRLRP L L + L+YRG + LA +
Sbjct: 1 MREVDRVISERLDSGVPLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPHRHSLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVDDS LRRG A +GN SVLVGDFL S+AF M++E +S +E
Sbjct: 61 EFIHTATLLHDDVVDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMMVEAQSMRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L+ +AEGE++QL N D+ E Y+HVI+SKTA LF A+ +++AG ++
Sbjct: 121 VLAEATNVIAEGEVQQLMNMHNADLNEAGYVHVIRSKTAKLFEASARCGAILAGADKTLE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A YG LG AFQ++DDVLDY G+ + MGK++G+D R GK TLP+I A QRGT+ E+
Sbjct: 181 AACADYGQALGTAFQVIDDVLDYAGDAHVMGKSLGDDLREGKATLPLIAAMQRGTESERQ 240
Query: 252 FWKSTINDGKISVEN-----LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+S I G E L++ ++R AL A ++A +L+ L +
Sbjct: 241 RIRSAIESGLGEDETRNAQVLQEVIAVVRRTGALEVARAAASREAERAIAALQGLSVNPH 300
Query: 307 KKSLMEVVDFCLQRLN 322
SL+++ L R +
Sbjct: 301 SASLVQLATQLLARQS 316
>gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
Length = 351
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 24/337 (7%)
Query: 6 DLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------- 57
+ E VN I + + + E + + +YL+ +GGKRLRP + L A L
Sbjct: 15 QTVEQRRELVNAAIEEELPIVEPERLYEASRYLLDAGGKRLRPTVLLLVADALADVEPMS 74
Query: 58 ---------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
+ + + A +IE I + TL+HDD++DD LRRG + + +T++L
Sbjct: 75 EAYRKFPALDGTELDVMAAAVSIEVIQSFTLIHDDIMDDDDLRRGVPSVHRAYDTETAIL 134
Query: 109 VGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLH 163
GD L S+AF +++ET + + + EG+ ++ + DV ++YL
Sbjct: 135 AGDTLYSKAFEIMLETDATPDRCVTALDVLASTCTRICEGQALDVAFEERPDVLPDEYLE 194
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+I++KTAVL+ AA +V +++ G +AL YG+++G AFQ+ DDVLD +++GK
Sbjct: 195 MIENKTAVLYGAAAKVPAVLLGADEETTEALYRYGIDVGRAFQIQDDVLDLTVPSDKLGK 254
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G D K T+ + A +G + + G ++ + +A + ++
Sbjct: 255 QRGSDLVESKQTIITLHARSQGVDVDSLVETDDV--GDVTEAEIDEAVQRLEAAGSIEYA 312
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A Q+ KD L LPD+ + L ++ D+ ++R
Sbjct: 313 TEKAQELVQRGKDHLSVLPDNESRYLLEQIADYLIER 349
>gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 326
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MK E K+ + VN + ++ + + + D +LI GGKRLRP + + + +L
Sbjct: 1 MKK-EKSIEKNAKIVNKYLNSKLKGNPKSLYDAASHLIVHGGKRLRPYMVIKSCQILGGN 59
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E IH TL+HDD++D+ +R G +G ++L GD L S+A+ +
Sbjct: 60 TATAMPAASAVEMIHNFTLVHDDIMDNDEMRHGVPTVHKKFGMPIAILAGDVLFSKAYQI 119
Query: 121 VIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ E+ + + A ++ + T+++Y+ +I KTA LF
Sbjct: 120 ISESNISKDSTVQLVSRLAKACVDVCEGQLLDVKMAEGKRIPTQKEYIAMIGKKTAALFD 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + ++ A L ++G NLGIAFQ+ DD++ G+ K +G D R GK
Sbjct: 180 VSCSMGAICATNNQKDILNLSNFGKNLGIAFQITDDLIGVMGDSKITKKPVGNDLREGKK 239
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+LP+++A + ++ + K + +LK A +++ V+ +A Y + A
Sbjct: 240 SLPILMAIKLSKGKDHKIILKAFGNPKATKNDLKNAVDVIQSLGIEVEVRSQALKYAEMA 299
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
K SL K L++++DF ++R
Sbjct: 300 KKSLSKY-SGPAKTELIDLLDFVVKRS 325
>gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
Length = 326
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 1/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKQPIETELGDFIDLFNHALDHEDGLLRTVLNHIKQQAGKRMRPILILLMAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD++A RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SEATQHAAVGLELLHTASLVHDDVVDEAAARRGQASVNADYDNKVAVLVGDYVLSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QL +N ++TEE Y +I+ KTA LF + +
Sbjct: 124 VSYTHSEIIVRYLAELGRTLSDGEILQLWNIQNKEITEEVYYKIIERKTAALFESCAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ A + +A + +G +LGI FQ+ DD+ DY E+GK G D GK TLP+I
Sbjct: 184 AESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGKPTGNDMAEGKLTLPIIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A E + +++ E++ K + + E R + + +A+ L
Sbjct: 244 ALNSTKNEEMLALAHKVKAHEVTREDIDKLVEFAKVTGGIEYAERRMWDFHAEAQTFLDK 303
Query: 301 L-PDSSWKKSLMEVVDFCLQRL 321
D S + +L +D+ ++R
Sbjct: 304 YVKDDSIRSALQTYLDYVIKRK 325
>gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
Length = 319
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 2/315 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ +VN L+ + + + + + +K + +GGK LRP L L A + +
Sbjct: 6 LIANELAQVNELLKQTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQ 65
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A AIE +H ATL+HDDV+DDS RRGK + + +G +V GD L + F ++++
Sbjct: 66 IATAIETLHMATLIHDDVIDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNE 125
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E L + + GEL Q++ NL+ T +DYL IK KTA LF A E + AG
Sbjct: 126 PEYLRLNAQTMRQILNGELGQMNQRFNLEQTFDDYLADIKGKTATLFRLAAEEGAHFAGG 185
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
Q L ++ +LGIAFQ++DD+LDYRG + +L +
Sbjct: 186 NLEQTQILANFAEDLGIAFQIIDDILDYRGSSQL--NKPMLEDLPTGVYSLPLLLTLKQP 243
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++V+++K+ I+ ++ A+ +++ A +Y QK L L +
Sbjct: 244 DLKAQLLPLLNKRTAMTVKDIKQIQAIVIDSGAITESKQLAQNYAQKGIAELAKLAPNPA 303
Query: 307 KKSLMEVVDFCLQRL 321
K L ++ LQR
Sbjct: 304 VKILEKMAKELLQRT 318
>gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 330
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 180/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGADARTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS +K+SL+E+ + R +
Sbjct: 311 DSIYKESLLELCSYSTARQS 330
>gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus
jensenii SJ-7A-US]
gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus
jensenii SJ-7A-US]
gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
Length = 325
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 2/315 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ +VN L+ + + + + + +K + +GGK LRP L L A + +
Sbjct: 12 LIANELAQVNELLKQTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQ 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A AIE +H ATL+HDDV+DDS RRGK + + +G +V GD L + F ++++
Sbjct: 72 IATAIETLHMATLIHDDVIDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNE 131
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E L + + GEL Q++ NL+ T +DYL IK KTA LF A E + AG
Sbjct: 132 PEYLRLNAQTMRQILNGELGQMNQRFNLEQTFDDYLADIKGKTATLFRLAAEEGAHFAGG 191
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
Q L ++ +LGIAFQ++DD+LDYRG + +L +
Sbjct: 192 NLEQTQILANFAEDLGIAFQIIDDILDYRGSSQL--NKPMLEDLPTGVYSLPLLLTLKQP 249
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++V+++K+ I+ ++ A+ +++ A +Y QK L L +
Sbjct: 250 DLKAQLLPLLNKRTAMTVKDIKQIQAIVIDSGAITESKQLAQNYAQKGIAELAKLAPNPA 309
Query: 307 KKSLMEVVDFCLQRL 321
K L ++ LQR
Sbjct: 310 VKILEKMAKELLQRT 324
>gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 324
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 159/325 (48%), Gaps = 4/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + +++ +N I K I I V ++++ S GKRLRPMLT+ + + Y
Sbjct: 1 MNIYTTYIEQELPYINAAIKKSIAELPSSIQPVAEHILLSKGKRLRPMLTILLSRLFGYN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LA ++EF+H ATLLHDDV+D++ LRR + A ++G +++L GD LL++ +
Sbjct: 61 EDDIYPLAISVEFLHAATLLHDDVLDNALLRRNTITAHNLFGTVSTILAGDALLAKGNLL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V Q+ + +S A GE+ ++ + + YL +I KTA + AA +V
Sbjct: 121 VATYGCQKCILTISQALYQTAHGEILEIYNQGEIWENKNIYLEIITGKTAWVIQAACKVG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG +G NLGIAFQ++DD LD + GK G D R GK T P+
Sbjct: 181 ALKAGATPQQVDVAALFGYNLGIAFQIIDDALD-FLPSKDTGKPEGGDIREGKFTPPLFY 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + EKN + + E + ++ E T A Y QKA +L
Sbjct: 240 YLKTLSLEEKNIFIKKFQTHNFTDEEILTITRVIHEQNFDQKTRELANVYFQKALTNLEL 299
Query: 301 L---PDSSWKKSLMEVVDFCLQRLN 322
L P +K L+E +++ R +
Sbjct: 300 LTNVPKPEYKTILIECLNYISTRTS 324
>gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 323
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 1/315 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + L KD+ + + + S+V++I KY++ + GK +RP+ + A L Y
Sbjct: 4 EKIFKLINKDIINFQIELERSLYSNVDLIKKCNKYILNNNGKFIRPIAIILAAKSLFYNK 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H++LA IE IH +TLLHDD++DD+ RRG + +V+GN ++L+GDF+ ++AF M+
Sbjct: 64 KKHIILASLIELIHMSTLLHDDIIDDAKKRRGNASVNVVFGNIPTILIGDFIYTRAFQMI 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +S + + +S + EGE+ QL+ ++D+T ++Y+ +I KTA LF +L+ ++
Sbjct: 124 SKLRSFKIFKIISNAVNMIVEGEILQLTYCNSVDITIKNYMQIIYKKTAKLFEVSLQSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ QA K+YG LGI+FQ++DD LDY+ + + GK +G D + GK TLP+I A
Sbjct: 184 ILSKSSYKEEQAFKNYGRYLGISFQIIDDFLDYKSDFKKFGKILGNDLKEGKVTLPLIHA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + K I G S L IM E+R+L T A +KA L L
Sbjct: 244 MKNSNNSQFLLIKEAIQKGNHS-HLLNDILKIMEEHRSLEYTREYAKKKIEKAISFLNEL 302
Query: 302 PDSSWKKSLMEVVDF 316
S + ++L + F
Sbjct: 303 KYSIYIEALENLAKF 317
>gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 322
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 167/313 (53%), Gaps = 3/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++++V ++ KRI + I +++ +I + GK LRP + + EY + L
Sbjct: 11 IKNELDEVIKIMEKRIKNSNRSIRNILLDMIRNSGKMLRPAFVILSGKFGEYDRKRILPL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H ATL+HDD++D++ +RR K + +G +V +GDFL S+ F ++ + +
Sbjct: 71 AAAVEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKNYAVFIGDFLFSECFLLLSDNITI 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E L+ +S V + +GE+ Q N+D+T DYL I +KTA LF+ + V + +
Sbjct: 131 ENLKKVSKVVSRICKGEIGQFESRYNIDITINDYLKRIAAKTAALFALSFYVGAYESNCG 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L S G N+G+AFQ++DDVLDY GE N +GK + D R G TLP K
Sbjct: 191 EKLAKILGSIGYNIGMAFQIIDDVLDYTGEENVVGKPLCNDIRQGVFTLP---LIYSLEK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + E++K+ ++EN + ++ A Y +KA D + L DS K
Sbjct: 248 NKDEKMIALLKKESYCEEDIKRIVEFVQENGGVDRSKMLAEKYTKKAFDKISMLKDSPPK 307
Query: 308 KSLMEVVDFCLQR 320
+ L+EV L R
Sbjct: 308 QILIEVTSKLLYR 320
>gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 367
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 11/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------ 56
L +L D++ +N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 47 TLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAG 106
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q
Sbjct: 107 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 166
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+
Sbjct: 167 ASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAS 226
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T
Sbjct: 227 TKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 286
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVI A +R + + G L++A + + + + A A
Sbjct: 287 PVIFALEREPRLREIIESEFCEAGS-----LEEAIEAVTKGGGIKRAQELAREKADDAIK 341
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L ++V + L+R+
Sbjct: 342 NLQCLPRSGFRSALEDMVLYNLERI 366
>gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana]
Length = 390
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 11/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------ 56
L +L D++ +N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 70 TLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAG 129
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q
Sbjct: 130 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 189
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+
Sbjct: 190 ASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAS 249
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T
Sbjct: 250 TKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 309
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVI A +R + + G L++A + + + + A A
Sbjct: 310 PVIFALEREPRLREIIESEFCEAGS-----LEEAIEAVTKGGGIKRAQELAREKADDAIK 364
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L ++V + L+R+
Sbjct: 365 NLQCLPRSGFRSALEDMVLYNLERI 389
>gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana]
gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 406
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 11/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------ 56
L +L D++ +N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 86 TLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAG 145
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q
Sbjct: 146 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 205
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+
Sbjct: 206 ASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAS 265
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T
Sbjct: 266 TKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 325
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVI A +R + + G L++A + + + + A A
Sbjct: 326 PVIFALEREPRLREIIESEFCEAGS-----LEEAIEAVTKGGGIKRAQELAREKADDAIK 380
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L ++V + L+R+
Sbjct: 381 NLQCLPRSGFRSALEDMVLYNLERI 405
>gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 330
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 127/320 (39%), Positives = 182/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGADARIEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G + F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFETIFEAITRSGALDHTLECAKQEAQAAAAAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS +K+SL+E+ + R +
Sbjct: 311 DSIYKESLLELCSYSTARQS 330
>gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
Length = 347
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 94/342 (27%), Positives = 169/342 (49%), Gaps = 24/342 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-- 57
++ + + + E+VN I + + + E + + +YL+ +GGKRLRP + L TA L
Sbjct: 6 VRSVTEAVAERRERVNRAIEEELPIARPERLYEASRYLLDAGGKRLRPAVLLLTAEALCD 65
Query: 58 --------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ + + A +IE I + TL+HDD++DD LRRG + +
Sbjct: 66 VAPLSTDYREFPTLDGDTVDVLRAAVSIETIQSFTLIHDDIMDDDDLRRGVPSVHREYDL 125
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTE 158
+T++L GD L S+AF +++E+ + L+ + EG+ + + DV+E
Sbjct: 126 ETAILAGDTLYSKAFEIMLESGAHPGRSLKALRTLASTCTRICEGQSLDVEFERREDVSE 185
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+YL +I+ KTAVL+ +A V + + G + +AL YG+++G AFQ+ DDVLD
Sbjct: 186 SEYLEMIELKTAVLYGSATSVPADLLGADDRTVEALYRYGIDIGKAFQIQDDVLDLTVPS 245
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ +GK G D GK TL + A ++G + + ++ + A +
Sbjct: 246 DVLGKQRGSDLVEGKRTLITLHAREQGVDVDSLIGTD--DPEAVTEREIDDAVSRLEAVG 303
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ RA S ++ KD L LP++ + L + D+ ++R
Sbjct: 304 SIEYARERAQSLVREGKDELAVLPENEARSQLEAIADYLIER 345
>gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
18228]
gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
18228]
Length = 324
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 161/320 (50%), Gaps = 1/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++++ K++ + L + S ++ +V+ Y+ GK +RP+L + A + +
Sbjct: 5 ELIKRPIEKELGEFRELFESSLESSNPLLGEVLSYIRKRNGKMMRPILVMLMAKLFGHIN 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + +A ++E +HTA+L+HDDVVD+S RRG+ + V+ N+ SVLVGD++L+ +
Sbjct: 65 SSTLHVALSLELLHTASLVHDDVVDESDERRGQSSVNAVYNNKISVLVGDYMLATSLWHA 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
T E +E ++ + L+EGE+ QL+ N D +E+ Y VI+ KTA LF+A+ E +
Sbjct: 125 AHTGKVELVELVARLGQALSEGEIIQLANISNRDFSEDIYFDVIRKKTAALFTASAESGA 184
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG +G +GIAFQ+ DD+ DY +GK G D GK TLP +
Sbjct: 185 LSAGASEEEVSRAADFGEMIGIAFQIKDDIFDYYESPE-LGKPTGNDMLEGKLTLPALYV 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ I K S E + +++ + E Y Y +A L
Sbjct: 244 INKLNDESVRELALRIRALKASKEEIASFVELVKREGGIAHAEQVMYEYRNRALQLLPAS 303
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
D + + SL +D+ ++R
Sbjct: 304 ADEALRLSLTAYIDYVIERK 323
>gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 366
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 154/317 (48%), Gaps = 3/317 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V + + I + + ++L+ +GGKR+RP+LTL A + + V
Sbjct: 51 ITNNLARVEKKLREAIANSDPLADATSRHLVEAGGKRIRPLLTLLCAHLGDASLPAVVQA 110
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + RRG A VWGN +VL GD + ++A +V E S+
Sbjct: 111 AVVVELTHLATLYHDDVMDSAPFRRGAPTAHEVWGNSVAVLTGDLIFARASILVSELGSR 170
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G+L + + + E YL VI KT L +A+ ++ ++ A
Sbjct: 171 ALGIQARTFER-LCLGQLHETVGPRPDEDPIEHYLSVIADKTGSLVAASGQLGAIFAEAD 229
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L YG +G+AFQL DDV+D G + GK+ G D R G PTLPV+L +
Sbjct: 230 PAFEPVLVEYGEKVGVAFQLADDVIDVTGIKVKSGKSPGTDLREGVPTLPVLLLRRAAED 289
Query: 248 REKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+++ + + I+ S E L +A +RE+ ++ A + +A +L LP+
Sbjct: 290 GDQSAVELLTLIDGDLSSDEALAEAVAGLREHPVTAESWVVARQWANEAIAALAPLPEGV 349
Query: 306 WKKSLMEVVDFCLQRLN 322
K SL + R +
Sbjct: 350 VKDSLSNFALAVVDRAS 366
>gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase
[Mycobacterium smegmatis str. MC2 155]
gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase
[Mycobacterium smegmatis str. MC2 155]
Length = 329
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ L+ + E++ + V++L +GGKR RP+ T+ +A + E +
Sbjct: 16 VRDGVARIEDLMSDELGKADELMAEAVQHLFQAGGKRFRPLFTVLSAQLGPEPDAWQVTV 75
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +V
Sbjct: 76 AGAVIELVHLATLYHDDVMDEAQMRRGAQSANARWGNNIAILAGDYLFATASRLVSRLGP 135
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L G++R+ + + + + YL V+ KTA L +A+ + +G
Sbjct: 136 DAVRVIADT-FAQLVTGQMRETRGAADHVDSVDHYLKVVYEKTACLIAASGRFGATFSGA 194
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A +
Sbjct: 195 NDEQIERLSRLGGIVGTAFQIADDIIDIDSDPDESGKTPGTDLREGVHTLPVLYALRETG 254
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E++ +A ++R + L + SY +A++ L LP+
Sbjct: 255 PDADRLRELLAGPIERD-EDVAEALALLRRSPGLTKAKETVASYAAQAREELSHLPECPG 313
Query: 307 KKSLMEVVDFCLQR 320
+++L +VD+ + R
Sbjct: 314 RQALAVLVDYTISR 327
>gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 322
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 170/313 (54%), Gaps = 3/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V ++ KRI + + I +++ +I++ GK LRP + EY + L
Sbjct: 11 IKNELTEVIKIMEKRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDRKKILPL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +H ATL+HDD++D++ +RR K + +G +V +GDFL S++F ++ + +
Sbjct: 71 AAAIEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNIAI 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L+ +S V + +GE+ Q +N+D+T DYL I +KTA LF+ + V + +
Sbjct: 131 SNLKKVSKVVSKICKGEIGQFESRRNIDITINDYLRRIAAKTAALFALSFYVGAYESKCD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ +AL S G N+G+AFQ++DD+LDY G+ +GK +G D R G TLP K
Sbjct: 191 ENLAKALGSIGYNIGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLP---LIYSLDK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + S E++K+ +++N + ++ A Y +KA D + L DS K
Sbjct: 248 NKDKIMLELLKKESYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISMLKDSPSK 307
Query: 308 KSLMEVVDFCLQR 320
+ L+EV L R
Sbjct: 308 QVLIEVTGKLLYR 320
>gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase /
farnesyltransferase / Octaprenyl diphosphate synthase
[Burkholderia rhizoxinica HKI 454]
gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) /
Geranyltranstransferase (EC 2.5.1.10) /
Farnesyltransferase (EC 2.5.1.29) / Octaprenyl
diphosphate synthase (EC 2.5.1.-) [Burkholderia
rhizoxinica HKI 454]
Length = 352
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 132/316 (41%), Positives = 182/316 (57%), Gaps = 2/316 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L R
Sbjct: 39 PIADDMQQVNRVIRTRLASDVVLINQIAEYIIGAGGKRLRPALLLLVANALGERSGQRHE 98
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL S+AF M++ +
Sbjct: 99 LAAVIEFIHTATLLHDDVVDESQLRRGKQTANALFGNAASVLVGDFLYSRAFQMMVACDN 158
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
++ LS +AEGE+ QL + DV + Y+ VI+ KTA LF AA ++ ++IAG
Sbjct: 159 LRVMQILSDATNVIAEGEVLQLLNMHDPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGA 218
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
++ A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT
Sbjct: 219 PPALEAAAAEFGRTIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIEHGT 278
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + I G F + E+ AL T A + Q A ++ PDS +
Sbjct: 279 AEQAQLARDAIEHGGTD--RFDTIFTAINESGALEHTLRCAEAEAQAAARAIFSFPDSQF 336
Query: 307 KKSLMEVVDFCLQRLN 322
K+SL+E+ + R +
Sbjct: 337 KESLLELCSYSASRQS 352
>gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium]
gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase
gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium]
Length = 323
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 165/322 (51%), Gaps = 9/322 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L+ +D+ + + K I + ++ K+L+ K++RP + L A ++
Sbjct: 6 KTLQS-VKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAIDKNK 64
Query: 62 D---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LA E IHTATLLHDDVVD+S +RRG + +GN+ +V GDFL +Q+
Sbjct: 65 KIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLFAQSS 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + E ++A+S V LAEGEL+Q N + YL +KTA L +A+ +
Sbjct: 125 WYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNKTASLIAASCK 184
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
L++ S+ +YG NLG+AFQ++DD+LD +GK D + G T PV
Sbjct: 185 SCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPV 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A + +K K I ++ +A I++E A+ ++ AY + + A +S+
Sbjct: 245 LFALTKNSKLFK-----IIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSI 299
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ LP SS K SL+E+ L R
Sbjct: 300 KDLPTSSEKDSLIEIAYDLLNR 321
>gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
Length = 397
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 98/334 (29%), Positives = 170/334 (50%), Gaps = 16/334 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + ++ + V+ + + + S E + V+++ GGKRLRP L L + +
Sbjct: 64 LRSIYAPIVESLAAVDARLHRELQSRYEALVPVLRHGTQLGGKRLRPALLLLSGAAMHAD 123
Query: 61 --------------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++H+++A +E +HTATL+HDDV+D +A RR W + TS
Sbjct: 124 RTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTS 183
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+L+GD+L +Q+F + S A + A + EGELRQ+ LD+ EE YL +I+
Sbjct: 184 ILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIR 243
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L + ++ + ++G S +A +G +LGIAFQ+ DD LD G+ +++GK +G
Sbjct: 244 GKTAELTRVSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGDDDDVGKTLG 303
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D + GK TLP+I + + + + L + ++R++ A T
Sbjct: 304 TDLQQGKITLPLIRLLRH--EDTTVATAALDALRLSPEDRLARVMPLLRKSDAAEYTRKV 361
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A SY + A +++ SS +SL + DF + R
Sbjct: 362 AESYRRSAIEAISGFAPSSALESLKTIADFAVDR 395
>gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanothermus fervidus DSM 2088]
gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanothermus fervidus DSM 2088]
Length = 322
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 8/320 (2%)
Query: 7 LTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
K + + I K I + + +LI +GGKR+RP L L + + + ++ +
Sbjct: 3 YLEKYSKLIEEEIRKNISDIEPTELYKSSAHLIEAGGKRIRPSLVLLSTESVGGKIEDAL 62
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE IHT +L+HDD++D +RRG+ ++WG ++L GD L S+AF +++++
Sbjct: 63 NAATAIELIHTFSLIHDDIMDKDEVRRGRATVHVIWGEPLAILAGDVLFSKAFEVMLKSN 122
Query: 126 SQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + ++ L +G+ + KN +V E++YL +I KTA L +A+ ++
Sbjct: 123 IDEKRLVKVLDVMTKACVNLCKGQAYDMLFEKNFEVKEKEYLEMIYYKTASLIAASTKIG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I AL +YG LG+AFQ+ DD LD G+ ++GK +G D GK TL I
Sbjct: 183 AIIGNGSKEEINALYNYGKFLGLAFQIHDDYLDIAGDEKQLGKPVGSDIVEGKMTLIAIK 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A K ++ S + G + +K A I ++ ++ T +A Y +KAK S+
Sbjct: 243 ALNEANKEDREKLISILQSG--DEKKVKDAIEIFKKYNSIEYTHEKALKYAKKAKASIEV 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L DS K +L+ + DF ++R
Sbjct: 301 LEDSKAKDTLLSIADFVVKR 320
>gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium tuberculostearicum SK141]
gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium tuberculostearicum SK141]
Length = 334
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + ME V + I + + D V +L +GGKR RPM+ L + G
Sbjct: 17 QLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGC 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 KEVVKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + + + + V VI+ KTAVL ++A + +
Sbjct: 137 SELDTHTVGHFADTFEELVTGQMRETIGAGEANAVEHYT--AVIREKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G AL G +G+ FQ+VDDV+D + E GK G D R G TLPV+ A
Sbjct: 195 YHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + S +++A ++ ++ +Y + ++ L L
Sbjct: 255 LEEEGEVGDKLRELLTG-PLHSDAEVERAIELLHQSGGRQKALEDINAYLRTVEEQLAVL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P++S ++L ++ D+ ++R+
Sbjct: 314 PENSASQALRQLADYTVRRV 333
>gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 348
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 24/335 (7%)
Query: 8 TLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ E VN I + + + + +Y++ +GGKRLRP +T A
Sbjct: 14 IRERRELVNAAIDEELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAVTGTDPLSAD 73
Query: 57 ------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
L+ + + A AIE I + TL+HDD++D+ LRRG A + T++L G
Sbjct: 74 FREFAALDGNTVDVMRAAVAIEVIQSFTLIHDDIMDEDDLRRGVPAVHEQYDISTAILAG 133
Query: 111 DFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
D L S+AF + ET S A + L+ + EG+ +S D+ E+YL ++
Sbjct: 134 DTLYSKAFEFMTETGSDPANGLEAMRMLATTCTEICEGQSLDVSFESRDDILPEEYLEMV 193
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KTAVL+ A+ +++ G + V AL YG++ G AFQ+ DDVLD E+GK
Sbjct: 194 ELKTAVLYGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDDVLDLTVASEELGKQR 253
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D GK TL + A Q+G + +++ E ++ A + E ++
Sbjct: 254 GSDLVEGKETLITLHARQQGVDVDGLVD--ADTPAEVTEEAIEDAVAALEEVGSIAYARE 311
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +++K+ L LP+S ++ L ++ D+ + R
Sbjct: 312 TAEDLTRRSKEHLEILPESGSRELLADLADYLIVR 346
>gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 344
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 145/320 (45%), Gaps = 3/320 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L D L+ +E V + + S + + ++L+ +GGKR RP+L A +
Sbjct: 25 LPDSVLRVLEGVEAALRDDVASADPFVTEAARHLLDAGGKRFRPLLVALGAQFGDPTRAQ 84
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A +E H ATL HDDV+D++ +RRG +A W N ++LVGD+L ++A +
Sbjct: 85 VVPAAVVVELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYLFARAAD-ISA 143
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
EA+ + L G++ + + +LHVI KT L + + L
Sbjct: 144 DLGTEAVRLQARTFARLVHGQIAETVGPRPGVDPVAHHLHVIAEKTGSLIATSARFGGLF 203
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA-F 242
G AL YG +G+AFQL DD+LD E GK G D R G PTLPV+ A
Sbjct: 204 GGADPRYVAALAGYGETIGVAFQLSDDLLDIASESERSGKTPGTDLREGVPTLPVLYALA 263
Query: 243 QRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + G ++ ++L +A ++RE+ A+ S + A+ L L
Sbjct: 264 SDDADASSLRLREILAAGPVTDDDLHAEALGLLRESPAMKRARETVRSRAEDARAQLAPL 323
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P ++ L + D R
Sbjct: 324 PQGPARRVLESLCDHIADRT 343
>gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 322
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 167/313 (53%), Gaps = 3/313 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++++V ++ KR+ + I +++ +I + GK LRP + + EY + L
Sbjct: 11 IKNELDEVIKIMEKRVKNSNRSIRNILLDMIRNSGKMLRPAFVILSGKFGEYDRRRILPL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H ATL+HDD++D++ +RR K + +G +V +GDFL S+ F ++ + +
Sbjct: 71 AAAVEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKNYAVFIGDFLFSECFLLLSDNITI 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E L+ +S V + +GE+ Q N+D+T DYL I +KTA LF+ + V + +
Sbjct: 131 ENLKKVSKVVSRICKGEIGQFESRYNIDITINDYLKRIAAKTAALFALSFYVGAYESNCG 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L S G N+G+AFQ++DDVLDY GE N +GK + D R G TLP K
Sbjct: 191 EKLAKILGSIGYNIGMAFQIIDDVLDYTGEENVVGKPLCNDIRQGVFTLP---LIYSLEK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + E++K+ ++EN + ++ A Y +KA D + L DS K
Sbjct: 248 NKDEKMIALLKKESYCEEDIKRIVEFVQENGGVDRSKMLAEKYTKKAFDKISMLKDSPPK 307
Query: 308 KSLMEVVDFCLQR 320
+ L+EV L R
Sbjct: 308 QILIEVTSKLLYR 320
>gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis]
Length = 418
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 11/320 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRG 61
D++ +N + + ++ ++ + +GGKR+RP L + L+
Sbjct: 103 VAGDLQTLNQNLRSIVGAENPVLMSAADQIFGAGGKRMRPALVFLVSRATAEIVGLKELT 162
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+ +
Sbjct: 163 TKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKQTVHQLYGTRVAVLAGDFMFAQSSWYL 222
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ E ++ +S V A GE++Q S + DV E+YL KTA L +A+ + ++
Sbjct: 223 ANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIAASTKGAA 282
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +GV +SV + + YG NLG++FQ+VDDVLD+ ++GK G D G T PVI A
Sbjct: 283 IFSGVDSSVAEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFA 342
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ K + G L +A ++++ + + A A +L CL
Sbjct: 343 LEKEPKLREIIESEFCETGS-----LDEAVELVKQCGGIERAQELAKEKADLAIQNLNCL 397
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P ++ L E+V + L+R+
Sbjct: 398 PRGVFQSHLKEMVLYNLERI 417
>gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
Length = 332
Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIE 72
++ I+ + + + +LI +GGKRLRP++TL TA ML + LA +IE
Sbjct: 17 IDHYIMDFMSITPDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIE 76
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
HT +L+HDD++D +RRG +V+G+ ++L GD L + AF M+ +++
Sbjct: 77 TAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHE 136
Query: 133 LSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A ++ G+ + + DV DYL++++ KT L AA + ++ A
Sbjct: 137 QAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAA 196
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + + + + GMN GIAFQ+ DD+L G+ GK + D R GK TL VI A ++
Sbjct: 197 GAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKK 256
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+RE K S ++LK+A I+ ++ AL E RA Y ++A+D L +P
Sbjct: 257 AGRREIVDLI----GPKASEDDLKRAASIIVDSGALDYAESRARFYVERARDILSRVPAV 312
Query: 303 DSSWKKSLMEVVDFCLQR 320
D+ K+ L ++D+ ++R
Sbjct: 313 DAESKELLNLLLDYIVER 330
>gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
Length = 327
Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 95/327 (29%), Positives = 162/327 (49%), Gaps = 12/327 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + + +VN I K I DV + + +YL+ +GGKRLRP++ + ++ +L D
Sbjct: 2 ELEKYLGEVITQVNETIDKYIQGDVPELYEASRYLLKAGGKRLRPLMVVLSSELLGGSRD 61
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV- 121
+L AIE +H TL+HDD++D RRG + WG T++L GD L ++AF ++
Sbjct: 62 RAILAGAAIEVLHNFTLIHDDIMDQDTTRRGLPTVHVKWGIPTAILAGDLLHAKAFELIT 121
Query: 122 ------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ AL S ++EG+ + + DVTE YL +I+ KTA LF+
Sbjct: 122 ESIKGLPIDLAYRALNCFSRSIVIVSEGQAMDMEFERRWDVTENLYLEMIRKKTAQLFAC 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + L+A N +L +G +GIAFQ++DD+L + E+GK + D R GK T
Sbjct: 182 SAHLGGLLANGTNEEVNSLYDFGEKIGIAFQIMDDILGITADEKELGKPLYSDIREGKKT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ +I A +R + ++ + + ++S L ++ E +L ++ Y + A
Sbjct: 242 ILLIKALERANEHQRKTIMNGMGSSEVST--LSSVASLLSEL-SLDYSQQLVRKYYENAL 298
Query: 296 DSLRCLPDSS--WKKSLMEVVDFCLQR 320
SL + + L + D + R
Sbjct: 299 RSLSKVRSRNQLALDGLRAIADLIITR 325
>gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
VS]
gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
VS]
Length = 324
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 7/325 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + + ++ V +R + +++ Y++ GGK LRP L++ +A+
Sbjct: 4 LSSIYAPINEGLKGVEDEFKLVSERRKQSFPEMAEMLDYIL-VGGKVLRPALSMLSAMCF 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ LA + E +H ATL+HDD +D + RRG+ VWG + ++L+GDFL + A
Sbjct: 63 GAGIKKVLSLATSSEMLHIATLVHDDAIDKADTRRGRRTVNSVWGLEKAILLGDFLFAHA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+T + + + +A GEL+Q S N D + E+YL I KTA LF A
Sbjct: 123 AETAADTGNMRIVTLFAQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMAT 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++A + + ++SYG NLG++FQ+VDD+LD+ G +MGK +G D NG TLP
Sbjct: 183 KGGAILADASPADEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ R + D ++ KA ++ + + + A Y A
Sbjct: 243 ALILMDRYPESNPIKDMLGATDRS---AHVAKAVEMINSSDIIDLSYKEAKRYADLACKD 299
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP ++ +KSL ++ +F ++R N
Sbjct: 300 LSKLPKTAARKSLYQLAEFIVERKN 324
>gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 322
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 191/320 (59%), Gaps = 2/320 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +D V+ LI ++ S+V ++ + +Y+I SGGKRLRP+L L + L
Sbjct: 4 ETIYAAVNEDFLSVDGLIKNQLFSNVPLVEKIGQYIIDSGGKRLRPLLVLLVSNALNATE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+++ LA IEF+HTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M+
Sbjct: 64 KHYLKLAAIIEFLHTATLLHDDVVDTSDLRRGRDTANAKWGNAPSVLVGDFLYSRAFQMM 123
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E + + + L+ +AEGE+ QL+ KN D+TE Y+ VI +KTA+LF AA ++
Sbjct: 124 VELRDMDVMSVLANATNVIAEGEVLQLTNCKNPDITEAQYMEVITAKTAMLFEAASHSAA 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ +K +G+ LGIAFQL+DDVLDY+G EMGKN+G+D GKPTLP++ A
Sbjct: 184 ILCQASAETTSDMKEFGLELGIAFQLIDDVLDYQGNAAEMGKNVGDDLAEGKPTLPLLYA 243
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+G + ++ + I +G + E L +R++ AL T A Y +A L L
Sbjct: 244 QQQGDEAQRKLIRKAIREGGL--EQLDAVMSAVRKSGALNYTIELAKEYATRAAARLERL 301
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S ++ +L + + + R
Sbjct: 302 APSVYRDALFALTEIAVNRT 321
>gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1]
Length = 324
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSRASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STMTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRTNHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGDAKQALEALCDEVVSRSS 324
>gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
Length = 324
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAIFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STVTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRANHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGDAKQALEALCDEVVSRSS 324
>gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1]
Length = 324
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSRASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STVTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRANHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGDAKQALEALCDEVVSRSS 324
>gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
Length = 348
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 93/341 (27%), Positives = 168/341 (49%), Gaps = 24/341 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
K + + + E VN + + + ++ E + + +YL+ +GGKRLRP ++L TA L
Sbjct: 8 KRVLEAIRERRELVNDALDEDVPMAEPERLYEASRYLLKAGGKRLRPTVSLLTAESLADV 67
Query: 59 --------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ ++ A +IE I + TL+HDD++DD LRRG A + N
Sbjct: 68 EPMSEDYRAFPTLAGDPIDVMVAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDNS 127
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEE 159
T++L GD L ++AF ++ +T + A L+ + EG+ + + +V +
Sbjct: 128 TAILAGDTLYAKAFELLTKTGADPADGLEAVRRLATTCTQICEGQALDIEFERRTEVLPD 187
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+YL +++ KTAVL+ A V +++ G + V +AL YG+ G AFQ+ DDVLD +
Sbjct: 188 EYLQMVELKTAVLYGTAAAVPAVVMGADDEVVEALYQYGIASGSAFQIQDDVLDLTVPSD 247
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
++GK G D K T+ + A Q+G + +++ + ++ A + E +
Sbjct: 248 QLGKQRGSDLVENKETIISLHARQQGIDVDDLVD--AETAEELTEDAVEAAVAELNEAGS 305
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A ++AK L LPD+ + L ++ D+ + R
Sbjct: 306 IDYAREMAEDLTEQAKSRLDVLPDNEARDLLCDIADYLITR 346
>gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1]
Length = 348
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 103/322 (31%), Positives = 177/322 (54%), Gaps = 4/322 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
++ + +D ++ + + S V+++ V K++I +GGKR+RP++TL TA ML + +
Sbjct: 27 DIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQS 86
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F ++
Sbjct: 87 QQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLL 146
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++
Sbjct: 147 VGFNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAA 206
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I
Sbjct: 207 LL-QGREEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKT 265
Query: 242 FQRGTKREKNFWKSTINDGKISV--ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + ++++ +++ + AL + R + A+ +L
Sbjct: 266 LEFLEHSNPAMYDKLRIAVQTGKVVDDVQMLIKLVQSSGALDYCKARVLEETKNAQHALN 325
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP++ +++ L + + RL
Sbjct: 326 NLPNNRYREGLYLLTELASSRL 347
>gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella
multacida DSM 20544]
gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella
multacida DSM 20544]
Length = 319
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGD 62
+ D+ D+E + + + + S E++ +V +L+ SGGKR+RP L L +A +
Sbjct: 1 MFDVIKGDLEILEQGLQEAVTSTNELVTEVGMHLVTSGGKRIRPALCLLSARGGKAFDLP 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMV 121
+ + LA A+E IHTA+L+HDDV+D++ RRG A W NQ ++L GD++ ++AF +
Sbjct: 61 HVLPLAEALELIHTASLVHDDVIDEADTRRGAATANARWNNQVAILSGDYIFARAFALLA 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L+ + C L+ GE+ Q DY I+ KTA E+
Sbjct: 121 EAGYGDYVLKRLAELVCNLSVGEIIQDHAIYQASRGMADYFERIQKKTADFLEICCELGG 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ G+ L YG +G+AFQ+ DD+LD ++GK G D R G TLPVI A
Sbjct: 181 LVGGMDREEAGKLAEYGHCIGMAFQITDDLLDIEQTTEKIGKPAGNDIRQGIVTLPVIRA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RC 300
+ ++ + D +++ E +++A I++ + + +A Y AK L
Sbjct: 241 LETSPDA--KELEAIVTDMEMTDEMVERALAIVKATDGVDFAKAKADEYLAHAKAVLPDS 298
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP ++S V DF R
Sbjct: 299 LPA-DIRESYEMVADFIGDR 317
>gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9]
gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9]
Length = 322
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 129/317 (40%), Positives = 181/317 (57%), Gaps = 2/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DM V+ +I + + SDV +I V +Y+I +GGKRLRP L + A L +G
Sbjct: 6 FRQLITDDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQGPA 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A IE IHTATLLHDDVVD+S RRG+ A ++GN SVLVGDFL ++AF M++
Sbjct: 66 VHEQAAMIECIHTATLLHDDVVDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQMMVH 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T S LE ++ +AEGE+ QL N D+TE +YL VI+ KTA LF AA V +L+
Sbjct: 126 THSLRVLEIMAEATNIIAEGEVMQLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRVGALL 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GK TLP+I Q
Sbjct: 186 AGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGDAATIGKSLGDDLAEGKTTLPLIYVMQ 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G+ + + + E ++ AL +A + Q+A +L LPD
Sbjct: 246 HGSPDQAAVVRGALQAADR--ERFDAVLSAVQSTPALDYAHGQAVAAAQRAVAALAGLPD 303
Query: 304 SSWKKSLMEVVDFCLQR 320
S +++L E+ ++R
Sbjct: 304 SEARQALTELALLSVER 320
>gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium
acnes KPA171202]
gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium
acnes KPA171202]
gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3]
gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2]
gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1]
gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium
acnes 266]
Length = 324
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STVTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRANHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGDAKQALEALCDEVVSRSS 324
>gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
Length = 431
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 97/341 (28%), Positives = 161/341 (47%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 95 ELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSE 154
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + L+ GN+ S
Sbjct: 155 STEGGVLSILADKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLS 214
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + E YL
Sbjct: 215 VLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTY 274
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 275 YKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 334
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ G + N++ A +R++R + T+
Sbjct: 335 SDIRHGVITAPMLYAM-----EEFPQLQEVVDRGFDNPANIEIALDYLRKSRGIERTKEL 389
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + +A ++ LPDS +++L+++ + + R
Sbjct: 390 AREHADRAVKAIESLPDSDDEDVLTSRRALIDITERVITRT 430
>gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium
diphtheriae NCTC 13129]
gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium
diphtheriae]
Length = 330
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+ L + M +V L+ + + + + + V +L +GGKR RPM L +
Sbjct: 12 QNLNEEIAAGMIRVEDLLREELSKGEDFLVEKVMHLAEAGGKRFRPMFALLASQYGSQPM 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+N + A +E H ATL HDDV+D++ RRG +A W N ++L GD LL+ +
Sbjct: 72 SENVIKAAVVVEMTHLATLYHDDVMDEADKRRGVDSANFRWNNSVAILAGDILLAHVARL 131
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + A + ++ E YL+VI KT VL ++A +
Sbjct: 132 MADLGVETVAHFSETFAE--LVTGQMRETIGARDGDPIEHYLNVINEKTGVLIASAGFLG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S+ AG +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+
Sbjct: 190 SMHAGASAEHVEALRAYGRAIGMVFQIVDDIIDIFSDTTDSGKTPGTDLREGVFTLPVLY 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A T + + A ++ + + Y ++A+ L
Sbjct: 250 ALSEDTAVGEELRSILTG-PLTDDATVAHALDLLARSTGRERALADVHRYLEEAERQLAL 308
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP +S +L + + ++R+
Sbjct: 309 LPQNSTTDALRSLAHYTVKRV 329
>gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
345-15]
gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
345-15]
Length = 338
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 18/335 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-- 59
+ +L K + VN I + E + + +LI +GGKRLRP++ LATA L
Sbjct: 4 DDMNELVEKYVPLVNSDIYDVVKGAPEELYNASLHLIKAGGKRLRPLVVLATARALGGVD 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ LA A+E H TL+HDD++D+ RRG V+G ++ GD + S +F
Sbjct: 64 AEARAIPLASAVEIFHNFTLVHDDIMDNDDFRRGVPTVHKVYGVPLAITAGDLMFSLSFA 123
Query: 120 MV--------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ E +A++AL+ + +AEG+ + ++ +V EDYL +I KT
Sbjct: 124 SILRSLEKGLDEEYVIKAVQALTEASRKVAEGQGYDMLFERSWNVDAEDYLRMIYLKTGA 183
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++ ++ A ++ V + + YG +G+AFQ+ DD+L G+ ++ GK + D R
Sbjct: 184 LVEASAKLGAIAAKAKDEVIETMGEYGRLVGLAFQIRDDILGVFGDPSKTGKPVYSDLRR 243
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T+ + A K ++ +G S E LK+A ++ AL + A SY
Sbjct: 244 GKKTILALKAASSNEKVKELLIDIF--NGDSSEEKLKEAAEAIKSTGALDYAQGLANSYS 301
Query: 292 QKAKDSLRCLP------DSSWKKSLMEVVDFCLQR 320
+ A + L L D ++L ++ F QR
Sbjct: 302 RLAVEKLDMLKASGLIVDEKAYRALRDLAVFSAQR 336
>gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 406
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 169/325 (52%), Gaps = 11/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------ 56
L +L D++ +N +L + ++ ++ + + +GGKR+RP L +
Sbjct: 86 TLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAG 145
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q
Sbjct: 146 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 205
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+
Sbjct: 206 ASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAS 265
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T
Sbjct: 266 TKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 325
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PVI A +R + + G L++A + + + + A A
Sbjct: 326 PVIFALEREPRLREIIESEFCEAGS-----LEEAIEAVTKGGGIKRAQELAREKADDAIK 380
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP ++ +L ++V + L+R+
Sbjct: 381 NLQCLPRGGFRSALEDMVLYNLERI 405
>gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
Length = 321
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 91/325 (28%), Positives = 153/325 (47%), Gaps = 12/325 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRG 61
LE+ K+ E ++ + S + +L+ +GGKRLRP +T+ A ++E
Sbjct: 2 KLEEYLEKNAELIDTRLESMYGSLPGELDKASAHLLCAGGKRLRPSVTMLAANIVEKGSS 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ + A A+E HT TL+HDD++D RRG W T++L GD L ++AF ++
Sbjct: 62 DSVIPAALALEVTHTFTLVHDDIMDGDVARRGVPTVHTKWDEPTAILAGDVLYAEAFELI 121
Query: 122 IETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + + + G+ +S K DV +YL ++ KT L++AA
Sbjct: 122 TMADADPVAKVEAVAILARTCLEICRGQHEDMSFEKRDDVDPYEYLEMVGQKTGKLYAAA 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ ++AG AL +G G+AFQ+ DDV+D + + GK+ D R GK TL
Sbjct: 182 AAIGGILAGGDARQVGALHDWGYLSGVAFQIQDDVIDLMADSEKSGKDRASDLREGKQTL 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I A +G K +S E + +A ++E + A + ++AK+
Sbjct: 242 VAIFAKDKGLDLSKY------RKENLSDEEIDQAITELKEAGIIDAVRETAMDHVKRAKE 295
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L PD K+ L E+ D+ + R
Sbjct: 296 TLVVFPDCEEKRLLGEITDYFINRS 320
>gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis C231]
Length = 339
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L + M +V L+ K +C + I + VK+L +GGKR RPM L + ++
Sbjct: 22 ALNEDISAGMTRVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMFALLASQYGDHPVS 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A +E H ATL HDDV+D++A RRG +A W N ++L GD LL A
Sbjct: 82 EDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILL--AHVSR 139
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + ++ E Y+ VI+ KT VL ++A + +
Sbjct: 140 LMADLGTDTVRHFSETFGDLVTGQMRETIGVGEGDPIEHYMAVIREKTGVLIASAGYLGA 199
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ A
Sbjct: 200 LHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVLYA 259
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + + + + ++ ++ + Y +A+ L L
Sbjct: 260 LREQTPIGEELRATLTG-PVTDDTTVARVLDLLTQSTGRDRALADVHHYLNEAEAQLELL 318
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P ++ ++L + F +QR+
Sbjct: 319 PQNATTEALRNLARFTVQRV 338
>gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays]
gi|219884511|gb|ACL52630.1| unknown [Zea mays]
Length = 428
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 92 ELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSE 151
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + L+ GN+ S
Sbjct: 152 STEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLS 211
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + E YL
Sbjct: 212 VLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTY 271
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 272 YKTASLISNSCKAVAILAGHTTEVSVLAHEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 331
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ G + N++ A ++++R + T+
Sbjct: 332 SDIRHGIITAPMLYAM-----EEFPQLQEVVDRGFDNPANVEIALDYLQKSRGIEKTKEL 386
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + +A ++ LPDS +++L+++ + + R
Sbjct: 387 AREHADRAVKAIESLPDSDDEDVLTSRRALIDITERVITRT 427
>gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
Length = 326
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L + + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKQPIEAELVDFIDLFNNALDHEDGLLQMVLNHIKQRAGKRMRPILILLIAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD++A RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 SSITQHAAVGLELLHTASLVHDDVVDEAAERRGQASVNADYDNKVAVLVGDYVLSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + L+ + TL++GE+ QLS +N +VTEE Y +I+ KTA LF +
Sbjct: 124 VSYTHSEMIVRRLAELGRTLSDGEILQLSNIQNKEVTEEVYYKIIERKTAALFETCAAIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG +A + +G NLGI FQ+ DD+ DY E+GK G DF GK TLP+I
Sbjct: 184 AESAGATEEQVEAARLFGKNLGIVFQIRDDIFDYYDSEVEIGKPTGNDFAEGKLTLPIIY 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + ++ E ++ +EN + + R + + +A+ +
Sbjct: 244 ALNATQNEDMMRLIHKVKAHNVTHEEVETLVRFAKENGGIEYAQRRMWDFHAEAQGFIDK 303
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
D + + SL +D+ ++R
Sbjct: 304 YVKDETIRTSLQTYLDYVIKR 324
>gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
Length = 304
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 166/310 (53%), Gaps = 10/310 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + +++ + V ++ + +Y++ SGGKRLRP+ TL + M + L A+
Sbjct: 4 LKAIEDRLVEELNPKVRLVLETGRYIVESGGKRLRPLFTLLVSGMCGGDPSKALPLGVAL 63
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E+IH A+LLHDDVVD + RRG+ +A LV+GN +VL GD++ +++ + + E +
Sbjct: 64 EYIHVASLLHDDVVDRAKTRRGRESANLVFGNGVAVLTGDYMYAKSLHLFSTYGNMEMIR 123
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S V +AEG++ ++S ++EE+Y +I KT VLF A V ++ +
Sbjct: 124 LVSGVVMDMAEGQVLEISKVG-DIISEEEYFQIIDGKTGVLFGACFGVGAM--SGECGDW 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L G+ LG AFQL+DD LDY G+ +GK +G D R GK T P N
Sbjct: 181 RELYEAGLRLGRAFQLIDDALDYEGDPKVLGKPVGNDLREGKCTYP-------LISVLDN 233
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + +E+ +K + E + T+ RA + K+ + P++ +K+ ++
Sbjct: 234 LDREEVKRVLRGLEDSEKLRKKVVELGGVEKTKERAKEELKVVKEIISKYPENEYKREIL 293
Query: 312 EVVDFCLQRL 321
+++DF ++R
Sbjct: 294 KLIDFVVERK 303
>gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
M23590]
gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
M23590]
Length = 335
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 156/314 (49%), Gaps = 4/314 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+++KVN L+ + I S+ ++ + +L+ SGGKR+RP + ++ + ++
Sbjct: 23 INNEIKKVNNLLEQIIKSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSKQSEDTYK 82
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E
Sbjct: 83 VAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQLSEVNH 142
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+S + GEL Q N + T +YL I KTA+L A EV +L +
Sbjct: 143 PRIHTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEVGALTSNA 202
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
LK G +G++FQ++DD+LD+ N++GK +G D NG TLPV+L +R +
Sbjct: 203 SQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENKLGKPVGSDLMNGHITLPVLLEMRRNS 262
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +K T K E+ + +R + ++ + + + Y KA + L +
Sbjct: 263 QFKKKITDLTSESPK---EHFEICIQDIRNSESIHEAKEVSDHYLNKALKLIDSLNEPHA 319
Query: 307 KKSLMEVVDFCLQR 320
+ +++ R
Sbjct: 320 QNLFRKLIKKMGSR 333
>gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 348
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 108/308 (35%), Positives = 176/308 (57%), Gaps = 3/308 (0%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ + + + V I +V Y+IFSGGKRLRP+L + A + GD A E++H
Sbjct: 43 DEALGQTLSCHVPFIKEVSDYIIFSGGKRLRPVLFMLAAQAVGGAGD--FRRAAIFEYLH 100
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
ATLLHDDV+D++ LRRG+ AAR ++GN+ +LVGDFL S+++ + E ++AL+
Sbjct: 101 AATLLHDDVIDEAGLRRGRPAARKLYGNEAVILVGDFLFSKSYSLAAEEPDHRFIQALTD 160
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+AEG++ +L + +L+++ + YL VI +KTAVL +AA ++ ++ AG V AL
Sbjct: 161 CTTHMAEGQVLELLRTDDLELSRQKYLEVIVAKTAVLLAAACQMGAIHAGASPEVENALY 220
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
YG++LG+AFQLVDD LDY G+ +E GK +G D GK TLP+I + +
Sbjct: 221 RYGLSLGVAFQLVDDALDYVGQEHEFGKPVGHDLAEGKITLPLIHVRDAADAQARQRLLG 280
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVV 314
+ + L +A ++ + + T +A Y + A+ +L LP + ++L +
Sbjct: 281 LARASRADRQALAQAKELIVQGGGVAHTFAQARRYARHAQQALEELPAANDAWQTLFALP 340
Query: 315 DFCLQRLN 322
+ + R N
Sbjct: 341 HYVVNRRN 348
>gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
ethenogenes 195]
gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
ethenogenes 195]
Length = 324
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 7/325 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + + ++ V + + +++ Y++ GGK LRP L++ +A+
Sbjct: 4 LSSIYAPINEGLKGVEDEFKLVSESRKQSFPEMAEMLDYIL-VGGKVLRPALSMLSAMCF 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ LA + E +H ATL+HDD +D + RR + VWG + ++L+GDFL + A
Sbjct: 63 GTGIKKVLPLATSSEMLHIATLVHDDAIDKADTRRSRRTVNSVWGLEKAILLGDFLFAHA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ ET + + + +A GEL+Q S N D + E+YL I KTA LF A
Sbjct: 123 AEVAAETDNMRIVTLFAQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMAT 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++A S + ++SYG NLG++FQ+VDD+LD+ G +MGK +G D NG TLP
Sbjct: 183 KGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L R + D ++ +A ++ + + + A Y A
Sbjct: 243 ALLLMDRYPENNPIKDMLGATDRS---AHVARAVEMINSSDIIDLSYKEAKRYADLACQD 299
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP ++ ++SL ++ +F ++R N
Sbjct: 300 LSKLPKTAARESLYQLAEFIVERKN 324
>gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
str. F0295]
gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
str. F0295]
Length = 325
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 154/323 (47%), Gaps = 2/323 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +++ L K + + ++ ++++ GGKR+RP+L L
Sbjct: 4 LSTIRTPIYTELQDFIALFDKSLTHEDGLLGQALEHVRAKGGKRMRPILILLMTKSFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TPVAQYAAVGLELLHTASLVHDDVVDESGERRGQASVNASYNNKVAVLVGDYILSTALLN 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ T + + L+ + TL+ GE+ QL+ N + +EE Y VI+ KTA LF + +
Sbjct: 124 IARTDDCDIVCDLAELGRTLSNGEILQLTNIVNTNFSEEVYFEVIRQKTAALFESCAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G +A +++G N+GI FQ+ DD+ DY + +GK G D GK TLPV+
Sbjct: 184 AKAGGADKQAVEAARAFGRNVGIIFQIRDDIFDYYQSAD-LGKPTGNDMAEGKLTLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + +S E + + + N + E + A D +
Sbjct: 243 ALNTTGDTQMAALARKVKARNVSAEEIAQLVEFTKNNGGIAYAERKMAECQALAMDFIDR 302
Query: 301 L-PDSSWKKSLMEVVDFCLQRLN 322
D+ K +L VDF + R N
Sbjct: 303 YVADTQLKNALKAYVDFIIDRKN 325
>gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
20162]
gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
20162]
Length = 326
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D+ +V +I + I + + +L +GGKR RPM T+ + + D +
Sbjct: 15 VRADLARVEQVIAEGIAEADGCVIEEALHLFEAGGKRFRPMFTILSGRIGGAMSDQVITA 74
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E H ATL HDDV+D++ RRG +A WGN ++L GD+L ++A + +
Sbjct: 75 AAAMELTHLATLYHDDVMDEADARRGAPSANARWGNSIAILAGDYLFARASAFGADLGPR 134
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L + YL I KT L + + +L G +
Sbjct: 135 AVGVIAKCFGELVTGQML--ELKGAGESDPVQHYLDTIWGKTGSLIATCGLLGALHGGAE 192
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ Q + G +G+AFQ+ DD++D + GK G D R G TLPV+ A +
Sbjct: 193 EDLAQRMYRIGDAIGMAFQISDDIIDISSVAQQSGKTPGTDLREGVWTLPVLHALRDQGP 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + +A I+ + + Y A+ L LP+S +
Sbjct: 253 DGDRLREILVG-PVTDDALVAEAIEILGRSEGMKQARVTLDGYADTARAELAQLPESEAR 311
Query: 308 KSLMEVVDFCLQRL 321
+L +V F + RL
Sbjct: 312 TALESLVTFTVARL 325
>gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus
haemolyticus JCSC1435]
gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus
haemolyticus JCSC1435]
Length = 318
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 6/322 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L +++ V + K I S+ ++ + +L+ SGGKR+RP + ++ +
Sbjct: 1 MAKLN--MNSEIKNVEKRLQKAIESNDPILREASSHLLSSGGKRVRPAFVILSSQFGPQK 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ++ +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+
Sbjct: 59 KTEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTIVKKWDVTTAILTGNFLLALGLE 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E + +S + GEL Q N + + +YL I KTA+L A EV
Sbjct: 119 HLSEIRDNRIHHIISNSIVNVGLGELFQFQDQFNSEQSITNYLRRINRKTALLIQLATEV 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + + + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+
Sbjct: 179 GAITSEANDETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L K K + + + K +R + ++ +++ + Y KA +
Sbjct: 239 LEM---KKDTSFKKKIAALNHQSESQEFKPLIEQIRNSYSIKESKAISDKYLAKALKLID 295
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L + + + ++++ R
Sbjct: 296 ELDEPNAQSLFIKLIKKMGSRS 317
>gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 324
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 1 MKMLEDLTLKDMEKVNFL---ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+K + D+ V + + + + D++++++ +GGK LRP LT +
Sbjct: 4 LKSIYTPVSADLATVEAEFTGLADQWREEFPELHDMLRHIL-TGGKVLRPALTFLAGRCI 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ D + +A A E +H +TL+HDD +D +A RRG VWG + ++L+GDFL ++A
Sbjct: 63 DESTDRILNMATANELLHISTLVHDDAIDHAATRRGHQTVNNVWGLEKAILLGDFLFARA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
T + ++ S T+A GELRQ + + E Y I KTA L +
Sbjct: 123 GEYAAATDNLRTVKMFSNTLQTIAVGELRQAKDVFSPAQSREGYFKRIAGKTASLLKMST 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
E +++ QAL +G NLG+AFQ+VDD+LD+ G E+GK +G D R G TLP
Sbjct: 183 ESGAVLGSGTEEQIQALADFGWNLGMAFQIVDDILDFTGTEAELGKPVGSDLRQGTITLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L +R D + + + + ++ A Y +A +
Sbjct: 243 ALLLMERHPDDNPVADFLADRDR---EGAVARVIQAVMDEGLFEESYAFATEYSDRALER 299
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L LP+++ +++L E+ F + R
Sbjct: 300 LAVLPETACREALRELTGFLIGR 322
>gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays]
Length = 428
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 92 ELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSE 151
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + L+ GN+ S
Sbjct: 152 STEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLS 211
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + E YL
Sbjct: 212 VLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTY 271
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 272 YKTASLISNSCKAVAILAGHTTEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 331
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ G + N++ A ++++R + T+
Sbjct: 332 SDIRHGIITAPMLYAM-----EEFPQLQEVVDRGFDNPANVEIALDYLQKSRGIEKTKEL 386
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + +A ++ LPDS +++L+++ + + R
Sbjct: 387 AREHADRAVKAIESLPDSDDEDVLTSRRALIDITERVITRT 427
>gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
Length = 346
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 2/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ + + + + S + +V + GKRLRP L L +
Sbjct: 27 IADFLAPIASELAEAERIFAQELGSRHPFVQQLVDHCSAFRGKRLRPALVLLCGQAVGRL 86
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+H +LA +E IHTATL+HDD++D+S +RR WGN+T+VL+GD+L + AF +
Sbjct: 87 TPDHPVLAAVVEMIHTATLVHDDILDESLVRRHAATINAEWGNETAVLLGDYLFTHAFHL 146
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+S A + + EGE+ Q+ +LD+ E YL +I+ KTA L + + ++
Sbjct: 147 AASLESTLACRWIGRATNLVCEGEMNQVHHRGDLDLDESTYLDIIQGKTAELIAVSCKLG 206
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + L+ +G +LG AFQ+ DDVLD GE GK++G D K TLPVI
Sbjct: 207 AHYAGADVETTERLERFGRDLGSAFQIADDVLDLWGEERVAGKSLGTDLFKQKLTLPVIR 266
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ +N E ++ + + L + A + + + ++L
Sbjct: 267 LLNVAPLEVRREVHGLLNQP--GPETRRRLRDHLNAYKTLDYSWTIAGRFVESSLEALAI 324
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP S + L + L+R
Sbjct: 325 LPPSQARTLLEAMARSVLRR 344
>gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
lugdunensis HKU09-01]
gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
lugdunensis HKU09-01]
Length = 318
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L +++KVN L+ + I S+ ++ + +L+ SGGKR+RP + ++
Sbjct: 1 MAKLN--INNEIKKVNNLLEQIIKSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSK 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ++ +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+
Sbjct: 59 QSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLE 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ E +S + GEL Q N + T +YL I KTA+L A EV
Sbjct: 119 QLSEVNHPRIHTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEV 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L + LK G +G++FQ++DD+LD+ N++GK +G D NG TLPV+
Sbjct: 179 GALTSNASQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENKLGKPVGSDLMNGHITLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L +R ++ +K T K E+ + +R + ++ + + + Y KA +
Sbjct: 239 LEMRRNSQFKKKITDLTSESPK---EHFEICIQDIRNSESIHEAKEVSDHYLDKALKLID 295
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L + + +++ R
Sbjct: 296 SLNEPHAQNLFRKLIKKMGSR 316
>gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
Length = 332
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 177/320 (55%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L DME++N +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 QLLAPIADDMEQINRVIRQSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSS 74
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 HRHTLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMV 134
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + ++
Sbjct: 135 GVGKMRVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAV 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG S A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 195 LAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLL 254
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ GT ++ + I G F + + AL T A Q A D+ P
Sbjct: 255 EHGTPEQQTLAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAADAFFSSP 312
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S +K SL+E V + R +
Sbjct: 313 LSIFKNSLLEYVSYSTTRKS 332
>gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e]
gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL
R2-561]
gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL
J2-003]
gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e]
gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
Length = 326
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLAKKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
+++ + + L R
Sbjct: 310 YREDMYRLTKNILDR 324
>gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL J2-064]
gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL J1-175]
gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
Length = 326
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y + V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKNILDR 324
>gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
Length = 320
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 123/315 (39%), Positives = 189/315 (60%), Gaps = 2/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
E VN LI++++ SDV ++ D+ +Y++ GGKR+RP+L L T L H
Sbjct: 8 IANAFEDVNTLIVEQLRSDVGLVEDIGQYIVAGGGKRMRPLLALLTGAALGGISQPHKHF 67
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A IEF+HTATLLHDDVVD S+LRRG+ A +GN +SVLVGDF+ S+AF +++
Sbjct: 68 AAVIEFLHTATLLHDDVVDVSSLRRGRPTANAAYGNASSVLVGDFIYSRAFQLLVNIGDM 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L+ ++ +AEGE+ QL + + D TE Y VI++KTAVLF AA +L++G
Sbjct: 128 RILKDIADTTNRIAEGEVLQLVRAGDADTTETQYYEVIQAKTAVLFGAACYGGALLSGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L+ +G+NLGIAFQ+VDD+LDY+G+ MGKN+G+D GKPTLP+I A Q
Sbjct: 188 ERKAEELREFGINLGIAFQIVDDILDYQGDPATMGKNLGDDLAEGKPTLPLIHAIQTAKA 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ + ++ I + S+ L I++ + +L + RA + KA+ ++ LP K
Sbjct: 248 QDADLIRTAITEKDKSL--LSDVVRIIQASGSLAYSRERALEFQHKAEQAISKLPAGQMK 305
Query: 308 KSLMEVVDFCLQRLN 322
+L + + R++
Sbjct: 306 DALTALAQQAISRIH 320
>gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 323
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L+ ++ VN + + E + V ++ +GGKRLRP+L + TA +L Y +
Sbjct: 6 LKARLALELPPVNAALERAAHGLPEPVRPVALHIFEAGGKRLRPLLVVLTARLLGYERAD 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +E +H ATLLHDDV+D++A RRGK AA ++ ++L GD LL+QA +V
Sbjct: 66 IYDLAVTMEMLHAATLLHDDVLDNAASRRGKPAAHTIFDVTPTILAGDALLAQANALVAG 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S A GE+ +++ + +D + E+Y +++ KTA L A+ ++ +L
Sbjct: 126 FGDPRLSLCFSEATSRTAAGEILEIAAQRRVDTSAEEYAEIVRGKTAWLIRASCQLGALR 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ +A +YG NLG+AFQ+VDD LD + GK G D R GK T P+ L
Sbjct: 186 AGGTDAQVEAAAAYGENLGMAFQMVDDALD-FAPESLTGKPTGGDVREGKLTPPLRLYRL 244
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E+ + + G ++ + +R+ T A +Y A+ +L LPD
Sbjct: 245 GLADGERAAFDAAFGCGLMTDNDAAAIAGRIRDAGHDRQTRLDADAYLATARSALDALPD 304
Query: 304 SSWKKSLMEVVDFCLQRL 321
++ + ++ D+ R
Sbjct: 305 RPERELMRQMADYVRDRK 322
>gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis I19]
Length = 339
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L + M +V L+ K +C + I + VK+L +GGKR RPM L + ++
Sbjct: 22 ALNEDISAGMTRVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMFALLASQYGDHPVS 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A +E H ATL HDDV+D++A RRG +A W N ++L GD LL A
Sbjct: 82 EDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILL--AHVSR 139
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + ++ E Y+ VI+ KT VL ++A + +
Sbjct: 140 LMADLGTDTVRHFSETFGDLVTGQMRETIGVGEGDPIEHYMAVIREKTGVLIASAGYLGA 199
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ A
Sbjct: 200 LHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVLYA 259
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + + + + ++ ++ + Y +A+ L L
Sbjct: 260 LREQTPIGEELRATLTG-PVTDDTTVARVLDLLTQSTGRDRALADVHHYLNEAEAQLELL 318
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P ++ ++L ++ F +QR+
Sbjct: 319 PQNATTEALRKLARFTVQRV 338
>gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
ATCC 33806]
gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
ATCC 33806]
Length = 343
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 6/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + L+ ME V + + + + + V +L +GGKR RPM TL + R
Sbjct: 25 ETLNEHVLRGMENVEDRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASN-YGPRP 83
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ A +E H ATL HDDV+D++ +RRG +A + W N ++L GD LL+ A
Sbjct: 84 MCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGDILLAHASR 143
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ E + + E Y+ VI KT VL +AA +
Sbjct: 144 IMSELGVDTVAHFAETFGA--LVTGQMRETEGPGTGDPIEHYMKVINEKTGVLIAAAGYL 201
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L +G L++ G +G+ FQ+VDD++D + GK G D R G TLPV+
Sbjct: 202 GALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGKTPGTDLREGVFTLPVL 261
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q T + + ++ +A ++ + + Y +A++ L
Sbjct: 262 YALQEDTPVGAELRELLTG-PLVDDASVDRALQLLARSNGRQKALADVHQYLAEAEEKLD 320
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++L ++ + R+
Sbjct: 321 QLPDNPTTRALRQLARVTVARV 342
>gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 330
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 180/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPISEDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGADTKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 311 HSIFKESLLELCSYSTARQS 330
>gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes Clip81459]
gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 220]
gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A]
Length = 326
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y + V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYHLTKNILDR 324
>gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Arthrobacter aurescens TC1]
gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Arthrobacter aurescens TC1]
Length = 367
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 3/317 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V + + I + + ++L+ +GGKR+RP+LTL A + + V
Sbjct: 52 ITTNLARVEKKLREAISNSDPLADATSRHLVEAGGKRIRPLLTLLCAHLGDASRPEVVQA 111
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + RRG A VWGN ++L GD + ++A +V E S+
Sbjct: 112 AVVVELTHLATLYHDDVMDSAPFRRGAPTAHEVWGNSVAILTGDLIFARASILVSELGSR 171
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G+L + + + E YL VI KT L +A+ ++ ++ AG
Sbjct: 172 ALGIQARTFER-LCLGQLHETVGPREDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGAD 230
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
S L YG +G+AFQL DDV+D G + GK+ G D R G PTLPV+L +
Sbjct: 231 ESYEDLLVEYGEKVGVAFQLADDVIDVTGVKVKSGKSPGTDLREGVPTLPVLLLRRDAAA 290
Query: 248 REKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ S E L + +RE+ ++ A + +A +L LP+
Sbjct: 291 GDASAIALLELVDGDLSSDEALAEVVAGLREHPVTEESWKIARQWSAEAVAALEPLPEGV 350
Query: 306 WKKSLMEVVDFCLQRLN 322
K SL + R +
Sbjct: 351 VKASLTNFAHAVVDRSS 367
>gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
Length = 366
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 152/317 (47%), Gaps = 3/317 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V + + I + + ++L+ +GGKR+RP+LTL A + + V
Sbjct: 51 ITNNLARVEKKLREAIANSDPLADATSRHLVEAGGKRIRPLLTLLCAHLGDASLPAVVQA 110
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + RRG A VWGN +VL GD + ++A +++
Sbjct: 111 AVVVELTHLATLYHDDVMDSAPFRRGAPTAHEVWGNSVAVLTGDLIFARA-SILVSELGG 169
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
AL + L G+L + + + E YL VI KT L +A+ + ++ +G
Sbjct: 170 RALGIQARTFERLCLGQLHETVGPRPDEDPIEHYLSVIADKTGSLVAASGQFGAIFSGAD 229
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L YG +G+AFQL DDV+D G + GK+ G D R G PTLPV+ +
Sbjct: 230 EAYEDVLVEYGEKVGVAFQLADDVIDVTGVKVKSGKSPGTDLREGVPTLPVLFLRRDAAA 289
Query: 248 REKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+++ + I+ S E L A +RE+ ++ A + +A +L LP+
Sbjct: 290 GDQSAVELLKLIDGDLSSDEALAAAVAGLREHPVTAESWVVARRWADEAIAALAPLPEGV 349
Query: 306 WKKSLMEVVDFCLQRLN 322
K SL + R +
Sbjct: 350 VKDSLSNFAVAVVDRAS 366
>gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
DSM 45100]
Length = 340
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
L ++ +E L+ + + + D + +L +GGKR R + TL AL +
Sbjct: 21 SELNEMLQARVEVAEKLLRESLMEGEPFLTDKINHLAIAGGKRFRVVFTLLAALYGDKPT 80
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N A +E H ATL HDDV+D++ RRG +A + WGN ++L GD+L + A
Sbjct: 81 SQNVYKAAVVVELTHLATLYHDDVMDEADRRRGADSANMRWGNSIAILAGDYLFAVA-SD 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + L G++R+ + E Y+ VI+ KT VL +AA +
Sbjct: 140 MLADLGAATVSHFASTFRELVTGQMRETVGCAEGEDPIEHYMTVIQEKTGVLIAAAGFLG 199
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +G VR AL ++G N+G FQ+VDD++D + E GK G D R G TLPV+
Sbjct: 200 AEHSGAPAEVRDALHAFGRNMGQVFQIVDDIIDIWSDPEESGKVPGTDLREGVFTLPVLY 259
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + + + +++A +++ ++ + + Y +KA+ L+
Sbjct: 260 AMRQEDEVGARLREILTGPVE-EDALVEEALELIKRSQGRERAQEQVNLYCEKAEAELQK 318
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S +L E++ F L+RL
Sbjct: 319 LPASEATDALRELLGFALKRL 339
>gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella
paramesenteroides ATCC 33313]
gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella
paramesenteroides ATCC 33313]
Length = 342
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++++ V F+I + ++ + + + + +GGK LRP + N +
Sbjct: 31 VQQELQDVLFIIQNSLQANDKEVEQALLDMFRAGGKMLRPAFAIIIGQFYPGNTSNLKHI 90
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +HTATL+HDD++DDS RR + + +G + GD+L + F +
Sbjct: 91 AAAVEMLHTATLIHDDIIDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATFKTLAYHTDD 150
Query: 128 EA-LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + + + GEL Q + + +T DY I KTA LF + ++ +
Sbjct: 151 MTLVRQATKLLEDILTGELTQRTNHYDRHMTLADYKEQIAGKTAALFVLSAQLGAANGDA 210
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + N+G+AFQ++DD+LDY+ ++GK +D R G + P
Sbjct: 211 PDEFVDLVTEFAFNVGMAFQILDDILDYQSTKTDLGKPTLQDVREGVYSAP----LIIAM 266
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + +IS + + ++ + A+ + A Y +KA D L LPD
Sbjct: 267 QDKAEIQNLLAKKDRISNDESIQLRDLVIASGAVDEATSLASEYTEKALDYLAQLPDGEA 326
Query: 307 KKSLMEVVDFCLQRLN 322
K +L+ + + L+R N
Sbjct: 327 KDTLITISEALLERAN 342
>gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
pacificum DSM 12653]
gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
pacificum DSM 12653]
Length = 322
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 167/303 (55%), Gaps = 3/303 (0%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
++ KR+ S ++I D++ ++ + GK LRP + +A Y + LA AIE +H A
Sbjct: 21 IMKKRVKSSNKLISDILLDMVNNSGKMLRPAFVIISAKFGNYDRKKILPLAAAIEMLHMA 80
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
TL+HDD++D++ +RR K + +G +V +GDFL SQ+F ++ + + L+ +S V
Sbjct: 81 TLVHDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSQSFLLLSDNINVANLKKVSKVV 140
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+ +GE+ Q ++++T DYL I +KTA LF+ + V + + + + L S
Sbjct: 141 SRICKGEIDQFESRYDINITINDYLKRIAAKTAALFALSFYVGAYESNCGEELAKILGSI 200
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G N+GIAFQ++DD+LDY GE + +GK + D R G TLP+I + +R S I
Sbjct: 201 GYNIGIAFQIIDDILDYTGEESVVGKPLCNDIRQGVFTLPLIYSLERNRDE---KIISLI 257
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+++K+ +++N + ++ A Y +KA D + L DS K+ L++V
Sbjct: 258 KKRNYCEDDIKRIVAFVQQNGGITQSKMLAEKYTKKAFDKIAMLKDSPPKQILIDVTTKL 317
Query: 318 LQR 320
L R
Sbjct: 318 LYR 320
>gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Picrophilus torridus DSM 9790]
gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Picrophilus torridus DSM 9790]
Length = 328
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 7/325 (2%)
Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-M 56
MK D + ++N +L I +D + + D+ +Y I +GGKR RP+LT+ +
Sbjct: 1 MKDFYDWQYSMRSKIAEINQRLLDSIQTDEKYLYDMARYTIEAGGKRFRPLLTILSFEIA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + LA E IHTA+L+HDD++D S +RRG+ G +++VGD+L ++
Sbjct: 61 SGESYEKILDLAAGYELIHTASLIHDDIIDHSDMRRGRYTLSYKEGINNAIVVGDYLFAK 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A+ + +E + ++ + LAEG++ + NL++ EE YL +I++KTA F+A
Sbjct: 121 AYELGS-RYGKEVSKIMADASSNLAEGQILEAENIGNLNMNEETYLKIIENKTARFFAAC 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ AG + L ++ N+G+AFQ+ DD+LD G +MGK D + TL
Sbjct: 180 ALGATKAAGADFEISNRLSNFAYNMGMAFQITDDILDIIGNEKDMGKPAMVDLGHDVITL 239
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P+I + + N + + S + K IM E A+ + A Y K+
Sbjct: 240 PIIYSLK--NNYYNNKIRDILTGNYKSPDLKDKFKNIMMETGAIEYSFKVAKDYINKSVS 297
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L + S LME+ ++R+
Sbjct: 298 YLSGIGRSRDLDLLMELAMIVIERI 322
>gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
hominis SK119]
gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
hominis SK119]
Length = 318
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 6/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L +++ V + I S+ ++ + +L+ SGGKR+RP L ++ +
Sbjct: 1 MAKLS--MNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKK 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 ITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLK 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + +S + GEL Q N +YL I KTA+L + EV
Sbjct: 119 QLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEV 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + N + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+
Sbjct: 179 GAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L K + + ++ + ++ ++ + Y KA D +
Sbjct: 239 LEM---KKDPVFKKQIVELSHLTNKHQFDPLIDQIKNSNSITQSQEVSDHYLNKALDLID 295
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L + + + +++ R
Sbjct: 296 QLEEPNSQNLFRKLIKRMRSR 316
>gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
xylaniphila YIT 11841]
gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
xylaniphila YIT 11841]
Length = 323
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 164/322 (50%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++M+ L + ++ +++++ GK +RP+LTL A
Sbjct: 4 LTQIRKPVEREMKDFESLFGITLQHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A ++E +HTA+L+HDDVVD+S +RRG+ + + N+ +VLVGD+LLS A
Sbjct: 64 NDSVLHAAVSLEMLHTASLVHDDVVDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALKH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ ++ + TL++GEL+QLS K+ +++E Y VI+ KTA LF+ EV
Sbjct: 124 AAMAGDLRVVDLVARLGQTLSDGELQQLSNVKSDEISENQYFEVIRRKTASLFAVCAEVG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L++G + L +G +GI FQ+ DDV DY GK G D + GK TLPV+
Sbjct: 184 ALLSGASENEILRLGEFGTYVGICFQIRDDVFDYYDAEV--GKPTGNDMKEGKLTLPVVH 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + G+ + E + +++ + + ++A +
Sbjct: 242 AVLQPGAETWHETALKVRAGRATEEEISALVNFTKQSGGIEYARRKMDEIREQAVGLIGA 301
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + ++L +DF L+R++
Sbjct: 302 DGNEAVGEALRLYLDFVLKRVS 323
>gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
Length = 343
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 6/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + L+ ME V + + + + + V +L +GGKR RPM TL + R
Sbjct: 25 DTLNEHVLRGMENVEDRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASN-YGPRP 83
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ A +E H ATL HDDV+D++ +RRG +A + W N ++L GD LL+ A
Sbjct: 84 MCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGDILLAHASR 143
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ E + + E Y+ VI KT VL +AA +
Sbjct: 144 IMSELGVDTVAHFAETFGA--LVTGQMRETEGPGTGDPIEHYMKVINEKTGVLIAAAGYL 201
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L +G L++ G +G+ FQ+VDD++D + GK G D R G TLPV+
Sbjct: 202 GALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGKTPGTDLREGVFTLPVL 261
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q T + + ++ +A ++ + + Y +A++ L
Sbjct: 262 YALQEDTPVGAELRELLTG-PLVDDASVDRALQLLARSNGRQKALADVHQYLAEAEEKLD 320
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPD+ ++L ++ + R+
Sbjct: 321 QLPDNPTTRALRQLARVTVARV 342
>gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
Length = 323
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 103/324 (31%), Positives = 167/324 (51%), Gaps = 5/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDV-VKYLIFSGGKRLRPMLTLATALMLE- 58
+ L KDM+ +N + + I S +L+ +GGKR+RP+ TA + E
Sbjct: 3 LNFLYPNIEKDMDMINHELKQAIISAEAETTTASALHLLEAGGKRIRPLFVCLTARLTEK 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A A+E IH A+++HDDVVD+++LRRG+ + WGN ++ GD+L +++
Sbjct: 63 PDQSKMKYAAVAVELIHMASIVHDDVVDNASLRRGRETIKSRWGNHIAMYTGDYLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ K EA E L+ V LA GE+ QL ++ + YL IK KTA+L + +
Sbjct: 123 DYMTNIKEIEAHEMLASVTVELATGEIEQLKSKYDVTQSIRTYLRRIKRKTALLIAVSCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++I+G + + L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV
Sbjct: 183 LGAVISGQDAATTKKLYQFGYYVGMAFQIQDDVLDFVGSQKELGKPAGEDLRQGNITLPV 242
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+A K + S + + + I++ ++A + A Y +KA L
Sbjct: 243 FMAMA---NEPTFKTKLQQLSSESSADFIAECISIVKASKAAEQADEIADRYLEKATAIL 299
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LP S+ +KSL ++V +R +
Sbjct: 300 ETLPRSTARKSLKQIVSSLEKRKS 323
>gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S]
gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161]
gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818]
gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900]
gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900]
gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818]
Length = 326
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 148/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ + ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDDASEQVLALISKYKGVEQAFKLAKKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
+++ + + L R
Sbjct: 310 YREDMYRLTKNILDR 324
>gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group]
Length = 403
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L ++ D+ K+N + + ++ ++ + + +GGKRLRP L +
Sbjct: 81 VSSLLEVVSDDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 140
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 141 AGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 200
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +
Sbjct: 201 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLA 260
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ +++ +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 261 SSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 320
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A Q K + I+ ++L A ++ + + + A G A
Sbjct: 321 TAPVIFALQDEPKL-----REIIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKGDLA 375
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L+CLP S ++ +L VV + LQR+
Sbjct: 376 LQNLQCLPKSQFRSTLENVVKYNLQRI 402
>gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
Length = 326
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I + I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEENIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGT 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKNILDR 324
>gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 322
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D+ +V +IL I + I + ++ LI + GK LRP L TA ++ +
Sbjct: 11 LDSDLLRVREVILTHIRNSSPTIREGLEELILAQGKMLRPSFLLLTARCGKFSKKKAYDI 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +H ATL+HDDV+DD+ RRG A G + ++L+GD+L S+ F + + +
Sbjct: 71 AAAIEMLHIATLIHDDVIDDADTRRGVPAVHTKIGIRKAILMGDYLFSRCFSIAAQYATI 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E +LS + + E+ Q + + ++ YL I KTA LF + + + +
Sbjct: 131 ENGRSLSTAVGFICQSEIDQSTKEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMN 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + G +G+AFQ++DD+LDY G +GK G D R G TLP+I+A +
Sbjct: 191 KTQVMWARRAGYAIGMAFQIIDDILDYTGSKEVLGKPAGSDLRQGVCTLPLIIARET--- 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ + I + I+ + AL A Y +A ++L LP + +
Sbjct: 248 KQSEEISALIQRLPNDPGVVDALLSIVEGSGALATAREEAQCYTDRAIEALDHLPANQAR 307
Query: 308 KSLMEVVDFCLQRL 321
+ L+ + L R
Sbjct: 308 EQLLALTRTVLARS 321
>gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988]
Length = 326
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ + ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDDASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKNILDR 324
>gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99]
Length = 326
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGT 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKNILDR 324
>gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 330
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 179/320 (55%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS +K SL+E+ + R +
Sbjct: 311 DSIFKDSLLELCSYSTARQS 330
>gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
hominis subsp. hominis C80]
gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
hominis subsp. hominis C80]
Length = 318
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 6/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L +++ V + I S+ ++ + +L+ SGGKR+RP L ++ +
Sbjct: 1 MAKLS--MNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKK 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+
Sbjct: 59 ITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDITTAILTGNFLLALGLK 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + +S + GEL Q N +YL I KTA+L + EV
Sbjct: 119 QLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEV 178
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + N + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+
Sbjct: 179 GAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVL 238
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L K + + ++ + ++ ++ + Y KA D +
Sbjct: 239 LEM---KKDPVFKKQIVELSHLTNKHQFDPLIDQIKNSNSITQSQEVSDHYLNKALDLID 295
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L + + + +++ R
Sbjct: 296 QLEEPNSQNLFRKLIKRMRSR 316
>gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosaeta concilii GP-6]
gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosaeta concilii GP-6]
Length = 319
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 16/322 (4%)
Query: 9 LKDMEK----VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+++E+ V I K + + + ++L+ SGGKRLRP + L A
Sbjct: 2 EEELERRAALVTATIEKLLPVMHPRGLYEASRHLVDSGGKRLRPSMLLLAAEAAGGEALA 61
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A +IE +H TL+HDD++D++ +RRG+ A +WG ++L GD L S+AF ++
Sbjct: 62 LAPAAVSIELVHNFTLIHDDIMDNADVRRGRPAVHKIWGQSGAILAGDTLYSKAFQVLGM 121
Query: 124 TKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
T + + LS + EG+ + VTE +Y+ +I+ KT VL+ A+
Sbjct: 122 TAASPERILGAMNMLSRTCTAICEGQWLDMEFESKDRVTENEYMEMIEKKTGVLYGASAG 181
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ L+AG V +AL +G G+ FQL DDV+D GK G D GK TL +
Sbjct: 182 MGGLLAGASPEVVRALDEFGRLTGMGFQLQDDVIDLLTPEEVSGKRQGGDLIEGKKTLIM 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + + S E + ++ I+ + ++ RA + K +L
Sbjct: 242 I------HAFANDVVVPVFSKKDASAEEIFRSISILEGSGSIEYARSRAEEMVVQGKRAL 295
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP S K++L+E+ D+ ++R
Sbjct: 296 DVLPPSPAKETLLELADYMIRR 317
>gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
Length = 329
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 6/325 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ M+ D+E I ++ +D ++ +++ Y + + GK +RPM L +A +
Sbjct: 4 LDMIRKPVEGDLEAFEQFIRQKFTADGTLLSEMLDYALSARGKGIRPMTVLLSAALNAPA 63
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
G +L A +E IH A+L+HDDV+D+S +RRG+ + W ++ +V+VGD++L+
Sbjct: 64 GQRSGGLRALLAATLVEMIHVASLIHDDVIDESDMRRGRASVNARWQSRNAVVVGDYILA 123
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + +++ + + + TL EGE+ Q + ++T YL +I KTA L
Sbjct: 124 KNMDLGLKSGQFDLVTHVCGAIATLCEGEILQNDKANRQEMTRASYLDIIYKKTACLIGV 183
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ +L G + ++ +G ++G+AFQ+ DD+LDY GK D R K T
Sbjct: 184 SASAGALAVGASREKQALMRKFGESIGMAFQIQDDILDYTRTAR-TGKPSNNDLREHKVT 242
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP++ + + + + + E+++ I+ + Y +A
Sbjct: 243 LPLLTVLESVGEERRRELLARLARCHEEDESVEYLQHIVENEGGMEKAARVMQEYLTRAM 302
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
L S ++ +L + + +R
Sbjct: 303 SVLSEYEPSEYRDALANLCVYVGER 327
>gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
Length = 325
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ L+ + E++ + V++L +GGKR RP+ T+ +A + E +
Sbjct: 12 VRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTV 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +V
Sbjct: 72 AGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGP 131
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L G++R+ + E YL V+ KTA L +A+ + +G
Sbjct: 132 EAVRIIADT-FAQLVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGA 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A +
Sbjct: 191 DETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESG 250
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++L +A ++R + + + Y Q+A+D L LPD
Sbjct: 251 PDTDRLRELL-ARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPG 309
Query: 307 KKSLMEVVDFCLQR 320
+++L +VD+ + R
Sbjct: 310 RQALASLVDYTITR 323
>gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
Length = 342
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ L+ + E++ + V++L +GGKR RP+ T+ +A + E +
Sbjct: 29 VRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTV 88
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +V
Sbjct: 89 AGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGP 148
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L G++R+ + E YL V+ KTA L +A+ + +G
Sbjct: 149 EAVRIIADT-FAQLVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGA 207
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A +
Sbjct: 208 DETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESG 267
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++L +A ++R + + + Y Q+A+D L LPD
Sbjct: 268 PDTDRLRELL-ARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPG 326
Query: 307 KKSLMEVVDFCLQR 320
+++L +VD+ + R
Sbjct: 327 RQALASLVDYTITR 340
>gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
Length = 335
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ L+ + E++ + V++L +GGKR RP+ T+ +A + E +
Sbjct: 22 VRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTV 81
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +V
Sbjct: 82 AGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGP 141
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L G++R+ + E YL V+ KTA L +A+ + +G
Sbjct: 142 EAVRIIADT-FAQLVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGA 200
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A +
Sbjct: 201 DETQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESG 260
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++L +A ++R + + + Y Q+A+D L LPD
Sbjct: 261 PDTDRLRELL-ARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPG 319
Query: 307 KKSLMEVVDFCLQR 320
+++L +VD+ + R
Sbjct: 320 RQALASLVDYTITR 333
>gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
20306]
gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
20306]
Length = 366
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D + V L+ + D ++L +GGKR RP+++L ++ G
Sbjct: 48 DQLNDRVAAGVAAVERLLHDETNRGASFVSDKAQHLSEAGGKRFRPIMSLLSSEFGSEPG 107
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A +
Sbjct: 108 SEKVIKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRL 167
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + + + + + + Y+ VI+ KTAVL ++A
Sbjct: 168 MSQLDTHTVEQFAATFEELVTGQMRETVGAGEANPID--HYMKVIQEKTAVLIASAGYFG 225
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +G +AL++ G +G+ FQ+VDD++D E +E GK G D R G TLPV+
Sbjct: 226 AYHSGAPKEHAEALRTIGGAIGMVFQIVDDIIDIFSESHESGKTPGTDLREGVFTLPVLY 285
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + ++ + + + E++++A ++R ++ Y
Sbjct: 286 ALEEDSEAGQGLRELLTGPLEAD-EDVERALELLRASKGRERALEVVQRYIDIVSAECAT 344
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD ++L + + R+
Sbjct: 345 LPDIPATRALRNLASYTADRV 365
>gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 334
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 106/320 (33%), Positives = 170/320 (53%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M++L + + +N + + ++ +++ +GGKRLRP+L + A L ++
Sbjct: 13 MRVLAAYIEQQLPAINDFLARETDKLDPLVRPAAAHVLAAGGKRLRPVLAILCARALGHK 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ LAC++EF+H+ATLLHDD++D + LRRGK AA +V+ +VL GD LL+ A +
Sbjct: 73 GEAIYPLACSLEFLHSATLLHDDILDGAVLRRGKAAAHIVFSRTEAVLAGDVLLALANQL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V LS GE+ ++ ++ +D + E YLH+I KTA L A+ V
Sbjct: 133 VASYGDPRLTTCLSEAIMRTVAGEVAEIVNTREMDSSLETYLHIITGKTAYLLEASCVVG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+AGV + + +A +G+N+GIAFQ+VDD +DY + GK G D R GK TLP+I
Sbjct: 193 ALLAGVSDELIKAASVFGLNMGIAFQIVDDAMDYTSASSVSGKPAGGDLREGKLTLPLIY 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + S I +S E L + ++ + A Y KA +L
Sbjct: 253 HLESLSPARREALLSDIRSKALSEEALAQLLADIQSSSCTERARALAGEYAAKAARALEA 312
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P+S +K L ++F LQR
Sbjct: 313 FPESEERKVLDCALEFVLQR 332
>gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
Length = 327
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 120/321 (37%), Positives = 190/321 (59%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ +++ K+N LI+ + SD +I V KYL+ +GGKR+RP+LT+ TA M +Y+GD
Sbjct: 6 KIQQDLKEEVTKLNNLIISCLKSDEGLIEIVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
NH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++
Sbjct: 66 NHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMV 125
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSS 181
S +A+ L+ + ++EGE+ QL + D I LF A+ +V +
Sbjct: 126 AAGSIKAMNILAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGASCKVGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + V + ++ +G LG FQ++DD+LDY G+ ++GKNIG+DF GK TLP+I
Sbjct: 186 IIAEQVDHVSKDMQDFGKLLGTIFQVIDDLLDYLGDDKQVGKNIGDDFLEGKVTLPLIFL 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++ + ++ I K + E K +M E+ +T + + L +
Sbjct: 246 YNTLEQDKQLWLQNVIKCDKRTNEEFIKVRNLMIEHEIYNETVNYLSNLENETNKLLNKI 305
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
P + +K L ++ F L R
Sbjct: 306 PVQNIYKDYLFSIMRFILDRS 326
>gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
Length = 353
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L + ++ + + I + ++L+ +GGKR+RP+L L A + D +
Sbjct: 38 ILSSLARIEERLAEAIAQTDHLADVASRHLLSAGGKRVRPLLALLCAAVDGEINDEVIEA 97
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+DD+ RRG +A+++WGN ++L GD + S+A +V
Sbjct: 98 AVVVELTHLATLYHDDVMDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVS-ELGT 156
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ S L G+L + + + + Y+ VI+ KT L +AA E SL++G
Sbjct: 157 RPMKIQSQTFERLVLGQLFETTGPREGQDLLDHYIAVIEGKTGSLIAAAGEYGSLLSGAS 216
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245
+ +K+YG +G+AFQL DDV+D + GK G D R G PTLP I
Sbjct: 217 EDIISMVKAYGELVGVAFQLADDVIDIVSDGKTSGKTRGTDLREGVPTLPTILLDRAVAA 276
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ ++ S E L+ A + + + AY + +A ++ LP+S+
Sbjct: 277 GDESAIAVRALLDADLSSDEALETAVEALAAHPVTQEAWQIAYDWADRAIAAIAPLPEST 336
Query: 306 WKKSLMEVVDFCLQR 320
K +L + R
Sbjct: 337 AKAALESFAHAVVHR 351
>gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 330
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 180/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREVIEQGGTD--RFDTIFEAITRSGALDHTLECAKKEAQAAAAAISSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS +K+SL+E+ + R +
Sbjct: 311 DSIFKESLLELCSYSTARQS 330
>gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase
gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius]
gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
Length = 330
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 94/330 (28%), Positives = 162/330 (49%), Gaps = 12/330 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ + + VN +I I DV + + +L SGGKRLRP++ ++ + +
Sbjct: 1 MSYFDNYFNEIVNSVNDIIKSYISGDVPKLYEASYHLFTSGGKRLRPLILTISSDLFGGQ 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-------LVGDFL 113
+ AIE +HT TL+HDD++D +RRG + +G ++ L
Sbjct: 61 RERAYYAGAAIEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKAFQL 120
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
L+QA + +A + + ++EG+ + +D+ E++YL +I KTA LF
Sbjct: 121 LTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAALF 180
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
SA+ + +LIAG ++ + + +G NLGIAFQ+VDD+L + E+GK + D R GK
Sbjct: 181 SASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGK 240
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T+ VI + + EK + + S E L + I+++ +L A Y +
Sbjct: 241 KTILVIKTLELCKEDEKKIVLKALGNKSASKEELMSSADIIKKY-SLDYAYNLAEKYYKN 299
Query: 294 AKDSLRCL---PDSSWKKSLMEVVDFCLQR 320
A DSL + D K +L + +F ++R
Sbjct: 300 AIDSLNQVSSKSDIPGK-ALKYLAEFTIRR 328
>gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix
orenii H 168]
gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix
orenii H 168]
Length = 326
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 174/321 (54%), Gaps = 2/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +EK++ +I + + V +I + L+ SGGKRLRP+L + +A + ++
Sbjct: 7 IAEYRQRFAPVIEKIDEIIWEITKTRVGLINIATRDLVESGGKRLRPLLVVLSARLGDFD 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A AIE +H ATL+HDD++D++ +RRG+++A+ +G +V +GDF+LS+AF +
Sbjct: 67 KEKIYHIASAIELLHMATLVHDDIIDEARIRRGEISAQSKFGKDVAVFLGDFMLSRAFDI 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
S+ +L L+ V + EGE+ Q V+ +YL I+ KTA+LF + +
Sbjct: 127 FTLYLSRHSLRKLNKVVGLICEGEIDQYEDKFEYKVSIREYLRRIRRKTALLFGLSTYIG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +GV+ + +G+ LG AFQ+ DD+LD+ + E GK IG+D NG LPVI
Sbjct: 187 AYESGVRGRNLSNIYRFGLRLGTAFQIQDDILDFVADPEESGKAIGQDLINGIYNLPVIY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q + ++ + + ++SV ++ ++ ++A+ + Y +K++ +
Sbjct: 247 LVQ--DEIFRDRAREILGKDRLSVSDVVDIINMVNNSKAINQSRELGKRYIEKSQKYVEH 304
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K+ L ++ L R
Sbjct: 305 LPDERVKEELNFILSLQLNRQ 325
>gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
Length = 324
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 5/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAIFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STVTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRANHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K++L + D + R
Sbjct: 303 LPDGDAKQALEALCDEVVSRS 323
>gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 327
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 134/303 (44%), Positives = 189/303 (62%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM++V+ +I R+ S V ++ +V +Y+I +GGKRLRP L L + L Y G
Sbjct: 13 ALIADDMQEVDKVIASRLQSAVPLVGEVARYIISAGGKRLRPALLLLMSGALGYTGSQRF 72
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL ++AF M++ET
Sbjct: 73 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANENFGNPASVLVGDFLYTRAFQMMVETS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S +E L+ +AEGE++QL + + ++E YL+VI+SKTA LF A+ +++++A
Sbjct: 133 SLRVMEILAEATNVIAEGEVQQLMNTHDASLSESGYLNVIRSKTAKLFEASARLAAVLAA 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ A SYG LG AFQ++DDVLDY G +EMGKN+G+D R GK TLP+I+A QRG
Sbjct: 193 SPPEIEHACASYGQALGTAFQVIDDVLDYDGNAHEMGKNLGDDLREGKVTLPLIIAMQRG 252
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+E+ +S I G S + L I+++ AL T A + Q A D+ LP +
Sbjct: 253 NTQEQALLRSIIETG--STDELSSVISIIKKTGALDATRQAAATQAQLAMDAAAQLPINP 310
Query: 306 WKK 308
K
Sbjct: 311 HSK 313
>gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
Length = 338
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/326 (26%), Positives = 142/326 (43%), Gaps = 7/326 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YR 60
+ +++V L+L + S +++ + +L +GGKR RPM + A E
Sbjct: 13 DEFAETVRSSLQRVEDLLLAELSSGDDVMTEAATHLAKAGGKRFRPMFAVLAAQFGERPD 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A +E IH ATL HDDV+D++ LRRG +A W N ++L GDFL ++A +
Sbjct: 73 ADEVITSATVVEMIHLATLYHDDVMDEAPLRRGAPSANARWSNSVAILSGDFLFARASRL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V L G++R+ K E YL V+ KT L +AA
Sbjct: 133 VSTLGPDAVRIIAET-FAELVTGQMRETVGVKAGGDPIEHYLRVVWEKTGSLIAAAGRFG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G + L G +G AFQ+ DD++D + GK G D R G TLPV+
Sbjct: 192 AMASGATPDDVERLSRIGDVVGTAFQVSDDIIDISSVTGDSGKTPGTDLREGVHTLPVLY 251
Query: 241 AFQRGTKREKNFWKST-----INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
A + + + + + +A ++ + + R S+ +A
Sbjct: 252 ALRSDDASSQRLRQLLVAADGTARPLTDDDEVAEAIELLGSSSGMSQAHARLQSFADEAD 311
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
L L D ++L +V + + R+
Sbjct: 312 AELAQLADGPAHQALSSLVRYTVDRM 337
>gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
Length = 358
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 9/323 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ +E+V +L + E+ +YL+ +GGKR+RP+LTL TA + N V
Sbjct: 37 IEEGLEQVEAGLLSHMTFADEIADATSRYLLEAGGKRVRPVLTLLTAQLGSGNNANVVTA 96
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E H A+L HDDV+D++ LRRG +A+ VWGN ++L GD L ++A ++ +
Sbjct: 97 AQAVEITHLASLYHDDVMDEAQLRRGVPSAQSVWGNSVAILTGDLLFARASKLIA-GLGE 155
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
AL S L G+L + K + YL V+ KT L + A EV + +
Sbjct: 156 RALILQSNTFERLCLGQLHETLGPKPGENPVTHYLQVLADKTGSLIATAAEVGVMFSDAP 215
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ ++ +G +G+AFQL+DDV+D E + GK G D R+G TLP++ +
Sbjct: 216 DEYTVPVRDFGEKIGVAFQLIDDVIDLSDETGKTGKKAGTDLRSGVATLPLLYLRELAVT 275
Query: 248 R--------EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ G+ + E L A +RE+ T A +G++A +SL
Sbjct: 276 DSEAAELLTRIERDVNANFYGEGNEEALDSAVTELREHSVTKKTLEEARRWGREAVESLA 335
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LPD KK+L D ++R N
Sbjct: 336 PLPDGPVKKALTRFADSIVERSN 358
>gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2
[Turicibacter sp. HGF1]
gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2
[Turicibacter sp. HGF1]
Length = 321
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 4/311 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E+VN +I +++ + +++K L SGGK++RP L + + + L+ +
Sbjct: 15 LEQVNHIINQQLTVKQSKMNEILKDLAQSGGKKIRPGLCIIGGEFGDKDIKHLYHLSAVL 74
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H ATL+HDD++DDS RRG++ + +G +V GD++ ++ F ++ E ++
Sbjct: 75 EMLHMATLVHDDIIDDSVQRRGQLTTQQKYGKDYAVYTGDYIFTKCFEILAEHYELHHMK 134
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS + GE+ Q + + YL VI +KT+ L + +L V + +G
Sbjct: 135 ELSKTVSRVCMGEIDQFDGRFKSHTSVKKYLKVIGAKTSALLAVSLSVGAYESGCDEKFC 194
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L G+++G AFQ++DD+LDY G+ + +GK +G D R G TLP++ K +
Sbjct: 195 KKLGKIGLHIGNAFQIIDDILDYVGDASRVGKTLGNDIRQGYYTLPLL----YALKHNDD 250
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + E + + + E + + A+ Y K+ ++ LP + L
Sbjct: 251 RLNELLASETYTDEVVSRIIERVNELGGVKQAQELAHKYTVKSLKEIKSLPAGQARDHLE 310
Query: 312 EVVDFCLQRLN 322
V + L R +
Sbjct: 311 WVTNQLLARQH 321
>gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio]
gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio]
Length = 411
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L KD++ + I +++ + + Y GK RPM+ + A
Sbjct: 88 LKDPFSLVQKDLQNIYDDIKQQLLVSKAELKALCDYYFDGKGKAFRPMIVILMARACNVH 147
Query: 61 GDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ +A E IHTA+L+HDDV+DDS RRGK VWG + ++L GDF+
Sbjct: 148 SNKEGVLLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGERKAILAGDFI 207
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
LS A + + + LS V L GE QL +N + + YL KTA L
Sbjct: 208 LSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFKKTASLI 267
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + + S++ V + YG N+GIAFQLVDD+LD+ N +GK D + G
Sbjct: 268 ANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKPSAADLKLGL 327
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T PV+ A Q+ + S ++ +A+ + ++ + T Y A Y Q+
Sbjct: 328 ATGPVLFACQQFPELHSMIM-----RRFSSDGDVDRAWQYVLKSDGVEQTNYLAQHYCQE 382
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + L SS + +L+ + + L+R
Sbjct: 383 AIRQISRLRPSSERDALIRLTELVLRR 409
>gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
Length = 325
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++ L K + ++ V+ ++ GKR+RP+L L A
Sbjct: 4 LSLIKLPIEAELADFIDLFNKSLMHSDGLLSQVLDHIRQRAGKRMRPILILLMARNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGDF+LS A
Sbjct: 64 SNVTQHSAVGLELLHTASLVHDDVVDESVERRGQASVNATYNNKVAVLVGDFILSTALLH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + S+E + L+ + L+ GE+ QL+ N +++E+ Y VIK KTA LF A +
Sbjct: 124 VSYSHSEEIVRYLAELGRILSNGEILQLNSISNEEISEDIYYQVIKQKTAALFEACAGIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A + K +G NLGI FQ+ DD+ D + E+GK G D GK TLPVI
Sbjct: 184 AMSANASELQIEEAKRFGQNLGIIFQIRDDIFD-YYDSKEIGKPTGNDMVEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + E + ++ + + + +EN + + R + + +A + L
Sbjct: 243 ALKSTGDEEMMKLARKVKAHTVTADEIAQLVAFTKENGGIEYADKRMWDFHAEAMNFLDT 302
Query: 301 L-PDSSWKKSLMEVVDFCLQRL 321
D +L +DF ++R
Sbjct: 303 YVEDKDIYNALKAYLDFVIERK 324
>gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 324
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 165/320 (51%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E + S ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKSPISAELEDFKKHFDTCLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLYNEV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ A
Sbjct: 64 RPATLHAAVALELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLTGDYLLATALVE 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T++ ++ +S + LAEGEL QLS N + +EE Y VI+ KTAVLF+A ++
Sbjct: 124 VGMTRNYAIIDLVSNLGQDLAEGELLQLSNVSNPEYSEEVYFDVIRKKTAVLFAACMKAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L GV + + + +G +G+ FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVGVDDEKAEYARLFGEYIGLCFQIKDDIFDYYEN-KEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + +G + + + + +E+ + + +KA L
Sbjct: 243 VLNSTQDKPAQEIAVKVKNGTATADEIARLIEFTKEHGGIEYATKVMVDFKEKALSLLAA 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ D+ K++L+ +D+ ++R
Sbjct: 303 MEDTDVKRALISYLDYVIER 322
>gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
Length = 337
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 8/326 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
LE +E V +L + S ++ ++ ++L +GGKR+RP+LTL A + E
Sbjct: 12 DLESRITPGLEVVERRLLDAVSSSRDLTDELTRHLAVAGGKRMRPLLTLVCAQLGEPERG 71
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A
Sbjct: 72 LDEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARASL 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + L EG+L + + + YL V+ KT L S A
Sbjct: 132 LVASLGPEMVAHHARTFER-LCEGQLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASF 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP-- 237
+L++G + + +G +G+AFQ+ DDVLD + GK G D R G TLP
Sbjct: 191 GALLSGAGQLMADVVSDFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVL 250
Query: 238 --VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ S E L +R + L +T A ++ A
Sbjct: 251 LLRRREAAGTIDEAGARILRELTGDLSSDEALASVVEQLRSHDVLEETRELARTWANDAV 310
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L LP K +L + + RL
Sbjct: 311 AALAPLPKGEAKTALEAFANLMVDRL 336
>gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
Length = 326
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ K++E+ L + S ++ +V+ Y+ GK +RP+L + TA +
Sbjct: 6 IDLIKQPVEKELEEFRGLFEDSLTSTDPLLGEVLAYIKKRSGKMMRPILVMLTAKLFGTL 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ +
Sbjct: 66 NESTFHAALSLELLHTASLVHDDVVDESDKRRGQSSVNAIYNNKVSVLVGDYMLATSLKH 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T E +E ++ + L+EGE+ QL D +EE Y VI+ KTA LF A+ +
Sbjct: 126 AALTGKVELVELVATLGQELSEGEILQLGNIGKEDFSEEAYFDVIRKKTAALFKASSQSG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G G +GIAFQ+ DD+ DY +GK G D GK TLP +
Sbjct: 186 AVSVGAVQEEVMKAGLLGEMIGIAFQIKDDIFDYFESPE-LGKPTGNDMLEGKLTLPALY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ I + S E + ++E + Y + KA +
Sbjct: 245 VLNQTGDDSLKQTALKIRSLEASKEEIAAFVETVKERGGIEYATRIMYEFRDKALALVPA 304
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
DS K++L +D+ ++R
Sbjct: 305 SADSCLKEALTAYIDYVIER 324
>gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
Length = 324
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
DL + + + ++ +D + + ++I +GGKR RP+L + + +
Sbjct: 7 SEFTDLVSAKLALIEDELGRQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVN 66
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + V A +E H A+L HDDV+D+++ RRG +A L WGN +++VGD+L S+A
Sbjct: 67 DADLVRAAVVMELTHVASLYHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLA 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + ++ + L +G++ + YL V+ KT L +A+
Sbjct: 127 VA-ELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ AL+ +G ++G FQL DD++D GK G D R PTLP +L
Sbjct: 186 AMVSHASAENVAALEQFGEDIGEVFQLADDLIDIT--STVTGKTPGTDLREKVPTLPTLL 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + D L +R N + + +A+ L
Sbjct: 244 LRASDDPADAELKEMLDAD-LSDDAVLSDVLDKLRPNHVIDEARVEIQRRADRARTHLTP 302
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD K++L + D + R +
Sbjct: 303 LPDGDAKQALEALCDEVVSRSS 324
>gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH]
gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU]
gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH]
gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU]
gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
Length = 332
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 16 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQ 75
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 76 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 135
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 136 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 195
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 196 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIE 255
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 256 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPS 313
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+E+ + + R +
Sbjct: 314 SNFKESLLELCSYSMSRQS 332
>gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
Length = 330
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 14 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQ 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 74 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 133
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 134 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 194 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIE 253
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 254 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPS 311
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+E+ + + R +
Sbjct: 312 SNFKESLLELCSYSMSRQS 330
>gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 353
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L + ++ + + I + ++L+ +GGKR+RP+L L +A + D +
Sbjct: 38 ILSSLARIEERLGEAIAQTDHLADVASRHLLSAGGKRVRPLLALLSAAVDGEINDEVIEA 97
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+DD+ RRG +A+++WGN ++L GD + S+A +V
Sbjct: 98 AVVVELTHLATLYHDDVMDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVS-ELGT 156
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ S L G+L + + + + Y+ VI+ KT L +AA E SL++G
Sbjct: 157 RPMKIQSQTFERLVLGQLFETTGPREGQDLLDHYIAVIEGKTGSLIAAAGEYGSLLSGAS 216
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245
V +K+YG +G+AFQL DDV+D + GK G D R G PTLP I
Sbjct: 217 EEVISMVKAYGELVGVAFQLADDVIDIVSDGKTSGKTRGTDLREGVPTLPTILLDRAVAA 276
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ ++ S E L+ A + + + AY + +A ++ LP+S+
Sbjct: 277 GDESAVSVRALLDADLSSDEALETAVEALAAHPVTQEAWQIAYDWADRAIAAIAPLPEST 336
Query: 306 WKKSLMEVVDFCLQR 320
K +L + R
Sbjct: 337 AKAALESFAHAVVHR 351
>gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
Length = 329
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 173/315 (54%), Gaps = 1/315 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DL D+ + + S V++I D+ +YLI GGKR+RP+L L +A L + +
Sbjct: 14 DLLRDDLLAIEREFTVQSASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQSRI 73
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
L +E +HTATL+HDD++D++ RRG+ ++ WGN VL GD+L Q+F +E +
Sbjct: 74 RLGAVVEMLHTATLVHDDIIDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFRTALEER 133
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L+ L + + EGEL Q+ + EE+Y +I KTA LF ++++ + I G
Sbjct: 134 NFHVLDLLITLTQQMVEGELLQMEKLG-HLINEEEYFDLIFRKTAFLFKVSMQLGAAIEG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + L YG NLG+AFQ+VDDVLD + +GK + D R GK TL VI A +RG
Sbjct: 193 ASDQTEEKLGEYGRNLGLAFQIVDDVLDLTAAEDVLGKPVASDLREGKATLAVIHALERG 252
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T ++ ++ + D + + + I++ + ++ A +Y + A+ S+ LP +
Sbjct: 253 TGADREAIRTVLADRSFAHVSHVQILEILQRHGSIDYAMDTACAYAEAARLSIADLPATD 312
Query: 306 WKKSLMEVVDFCLQR 320
K++L+ V F R
Sbjct: 313 AKRALLWVPGFVTSR 327
>gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon]
Length = 343
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 159/310 (51%), Gaps = 4/310 (1%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E + + + E+I D + Y+ +GGKRLRP+L L +A + + + A AIE
Sbjct: 19 EVIEQKMQRC---SNEIIHDALSYIRDTGGKRLRPILCLLSAEAVGGSREKAMTTAIAIE 75
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+L+HDD++DD+ +RR + ++G + ++++GDFL + M+ + E +
Sbjct: 76 LLHNASLVHDDIIDDNYVRRKSPSNPAMYGEKKAIVIGDFLFGISCEMLAKCGVPEVVGL 135
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+S +A GE + SL + TE+ Y+ V KTA F A+ E +++ G +
Sbjct: 136 VSSAVSDIAMGEYLEFSLRTLQETTEQSYMEVATLKTASTFMASAEAGAMLGGGSEAEIA 195
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
++YG N+GIAFQ+ DD+LD G+ + GK +G D +NG+ T+ VI A + E+ +
Sbjct: 196 NFRNYGKNVGIAFQIQDDILDICGDPAKTGKPVGLDIKNGERTILVIHALNHSERSEREY 255
Query: 253 WKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ ++ ++ + + ++ ++ + AK S+ L +S K L
Sbjct: 256 ISEIMTGKRELDRFDIDRMRELFIKSGSIDYALQLSNKLVMGAKSSIAGLKESEAKSKLQ 315
Query: 312 EVVDFCLQRL 321
+ D +R+
Sbjct: 316 FITDLTAERI 325
>gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 322
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 163/318 (51%), Gaps = 2/318 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ +ME + + K++ S +E++ + +LI +GGKRLRP L +A
Sbjct: 5 NFFNPISTEMELLEQELSKKLDSRIELLNESAVHLIKAGGKRLRPAFALLSAHFYMDDLT 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +E IH A+L+HDDV+D+S RRG + WGN+ S+ GDF+ ++A ++
Sbjct: 65 EVIPLAVGLELIHMASLVHDDVIDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALSLIA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ ++ L+ + + EGE+ Q+ N+ + ++YL I+ KTA+L S + ++ ++
Sbjct: 125 TYERSNVVDVLAEASMKICEGEIIQMMSCYNVKLGLKNYLRRIERKTALLISVSCQLGAM 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IA +AL++YG LG+AFQ+ DD+LD + +GK G D + G TLP + A
Sbjct: 185 IANAPEQEVRALRNYGYYLGMAFQVTDDILDIIADEQVLGKPTGSDIKQGVITLPTLYAL 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + + K I+ + + + Y + +KA+ L LP
Sbjct: 245 RYS--PRREELAQLLASPEACRNETGKIIDIIIDTDGIDYSYYITRHFARKAQKQLAFLP 302
Query: 303 DSSWKKSLMEVVDFCLQR 320
+ KK+L + DF L R
Sbjct: 303 ELPVKKNLYNIADFILAR 320
>gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 4b H7858]
gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes Clip81459]
gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J2-064]
gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J1-175]
gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes FSL N1-017]
gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 4b H7858]
gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes FSL N1-017]
Length = 321
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFDAVKNASVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KQAEDVATAYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 424
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+L ++ + + + ++V + +Y G GKR RP + L A L++
Sbjct: 88 ELVADELSILGNRLRSMVAAEVPKLESAAEYFFKVGAEGKRFRPTVLLLMASALKFPIPE 147
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + + GN+ S
Sbjct: 148 STDIGVFSILASKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVTSLNCIMGNKLS 207
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + + E + ++ L GE Q+S S+ + E YL
Sbjct: 208 VLAGDFLLSRACVALAALGNTEVVSLMATAVGHLVTGETMQMSTSREQRRSMEYYLQKTY 267
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 268 YKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSL 327
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E ++ G + N++ A ++++R + T+
Sbjct: 328 SDIRHGIITAPMLYAM-----EEFPQLHDVVDQGFDNPANVEIALEYLQKSRGIERTKEL 382
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + A ++ LPDS +++L+++ + R
Sbjct: 383 AQEHVNLAVKAIESLPDSDDEDVLISRRALIDITQRVITRT 423
>gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
DSM 15272]
gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
DSM 15272]
Length = 332
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 136/321 (42%), Gaps = 5/321 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
LE L +++V + + S + + +L+ +GGKR RP++ A +
Sbjct: 13 LEARILAGVDEVERQLAAAVDSPEAFVAEAAAHLLNAGGKRFRPLVVALCAEFGDPAAPG 72
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A +E H ATL HDDV+D++ RRG ++A W N ++LVGD+L +QA +V
Sbjct: 73 VVPSAVVVELTHLATLYHDDVMDEADKRRGALSANARWDNTLAILVGDYLFAQASDIVST 132
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + + V+ KT L + + +++
Sbjct: 133 LGPEAVRIQARTFSRLVRGQIRETIGPGDGDPLQHYLG--VVADKTGSLIATSARFGAMM 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ V AL +G +G AFQL DD++D E E GK G D R G PTLPV+L Q
Sbjct: 191 SAAPVEVEHALTEFGERIGAAFQLRDDIIDVASETGESGKTPGTDLREGVPTLPVLLVQQ 250
Query: 244 R---GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
T + + +A +R + A+ + S A+ L
Sbjct: 251 MSAGSTDPAEVRLLDLLGRPLTDDAEHAEALEALRRHPAMDEARSYVQSEADAARRLLEK 310
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD + +L + D RL
Sbjct: 311 LPDVPARAALAALCDTVATRL 331
>gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
Length = 319
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 161/320 (50%), Gaps = 5/320 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + + + + + SDVE I + L+ +GGKR+RP L L + L
Sbjct: 4 ETLTLDLETSLGRFEARLRELVDSDVEFIRLIQDDLVTAGGKRIRPRLVLLASRALGGVP 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA A+E +H+ATLLHDD+VDD+ RRG+ AA +GN SVL GD+LLS+ ++
Sbjct: 64 -REMELALAVELLHSATLLHDDLVDDAETRRGREAAFRKYGNAVSVLSGDYLLSRVLYLL 122
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
ET E + + VA LAEGE+ Q ++ + ++ +Y +I KTA L A E +
Sbjct: 123 AETGRLELVRLFADVARQLAEGEVFQFQVAALGEYSKANYERIIAGKTAALMRACTEGVA 182
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+A VR+AL+ +G G+ FQ+ DD LD G+ +GK +G D R GK TL +
Sbjct: 183 LLADAAPMVREALRRFGYEYGMVFQMRDDYLDLMGDGQVLGKPVGGDVREGKVTLITLHL 242
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R + + ++ + + A + ++A +L L
Sbjct: 243 LERAAEE----VGPILARRAAKPGDIARLRELAIATGAAEAVVEAITARAEQAVAALDPL 298
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDS K L+E+ ++R+
Sbjct: 299 PDSPAKAQLIELARSEVRRV 318
>gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237]
gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237]
Length = 324
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 149/322 (46%), Gaps = 6/322 (1%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
E+ + ++ + + + + Y++ GGKRLRP+LTL TA +
Sbjct: 2 QRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKKA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A+E H +L+HDD++DD+ LRRGK W T +L GD +L A+ +
Sbjct: 62 LDAALAVEVFHNFSLVHDDIMDDAPLRRGKATVHEKWDINTGILSGDAMLITAYQLFENY 121
Query: 125 KSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + S A + EG+ + DVT +YL +I+ KTAVL AA+++ +
Sbjct: 122 EGEVFRSLAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + ++ +G NLGIAFQL DD LD G+ GK +G D K T + A
Sbjct: 182 IIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGDPKTFGKQVGGDIIENKKTFLYLKA 241
Query: 242 FQRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + + + + E + I E+ A T+ Y +KA D L
Sbjct: 242 LAQSAPEQVSELEHLFSIQPVDATEKIDTVKSIFLESGAAERTQKEIVIYTEKAFDVLAK 301
Query: 301 LPDSSWKKS-LMEVVDFCLQRL 321
L S KK L + +QR
Sbjct: 302 LEISEEKKLVLKNFGESLMQRK 323
>gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
Length = 324
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 165/320 (51%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E + S ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKSPISAELEDFKKHFDSCLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLYNEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ A
Sbjct: 64 CPATLHAAVALELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLTGDYLLATALVE 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T++ ++ +S + LAEGEL QLS N + +E+ Y VI+ KTAVLF+A ++
Sbjct: 124 VGMTRNYAIIDVVSNLGQDLAEGELLQLSNVSNPEYSEDIYFDVIRKKTAVLFAACMKAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G + + + +G +G+ FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVGASDEKAEYARLFGEYIGLCFQIKDDIFDYYES-KEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + +G + + + +E+ + + +KA L
Sbjct: 243 ALNSTHDKQAKEIAVKVKNGTATTGEIARLIEFTKEHGGIEYATKVMVEFKEKALSLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ D+ KK+L+ +D+ ++R
Sbjct: 303 MEDTDVKKALVCYLDYVVER 322
>gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a]
gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a]
gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
Length = 332
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +
Sbjct: 16 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQ 75
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 76 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 135
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 136 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 195
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 196 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIE 255
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 256 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPS 313
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+E+ + R +
Sbjct: 314 SNFKESLLELCSYSTSRQS 332
>gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J]
gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J]
Length = 326
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 149/317 (47%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---H 64
K+++ V LI R+ I + L +GGK LRP + Y+ +
Sbjct: 11 IEKEIKAVTQLIENRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSFGPYQKERKEQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG + +G +V GDFL + F ++
Sbjct: 71 QKIAASLEILHMATLVHDDVIDDSPLRRGNPTIQTQYGKDVAVYTGDFLFTVFFELILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + GEL Q+ L N + DYL I KTA LF A + +
Sbjct: 131 MSNTPYMAINAKSMKKILVGELDQMHLYFNQKQSIRDYLRAISGKTAELFKLASQEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G +V + G ++G+ FQ++DD+LDY + K + ED NG +LP++ A
Sbjct: 191 SGADETVVRLAGRIGYHIGMTFQILDDILDYTADQKAFNKPVLEDISNGVYSLPLLFA-- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ IS + LK+ ++ N+ + + A Y QKA D + LP
Sbjct: 249 -LRENPFALKPLLDKKESISSQELKEVANLVIANKGVDQAKDLARKYTQKAIDDIEKLPK 307
Query: 304 SSWKKSLMEVVDFCLQR 320
S KK L+++ + L+R
Sbjct: 308 SKAKKQLLQLTNHLLKR 324
>gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98]
gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14]
gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91]
gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9]
gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210]
gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894]
gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC
13177]
gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112]
gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215]
gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
Length = 330
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +
Sbjct: 14 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQ 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 74 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 133
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 134 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 194 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIE 253
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 254 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPS 311
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+E+ + R +
Sbjct: 312 SNFKESLLELCSYSTSRQS 330
>gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1]
gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1]
Length = 324
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 12/326 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L D V+ I + + + E + +YL+ +GGKRLRP + + A +
Sbjct: 3 LMTLVDEIKNRSSHVDAAIDELLPVTRPEELYKASRYLVDAGGKRLRPAVLILAAEAVGS 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E +H TL+HDD++D +RRG A + WG ++L GD L S+AF
Sbjct: 63 NLRSVLPAAVAVELVHNFTLIHDDIMDRDDIRRGMPAVHVKWGEAGAILAGDTLYSKAFE 122
Query: 120 MVIETKSQEALEALSLV-----ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++ + +++ + + EG+ + VTE +YL +++ KT+VL++
Sbjct: 123 ILSKVENEPVRVLKCMDVLSKTCTEICEGQWLDMDFETRKKVTESEYLEMVEKKTSVLYA 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA ++ +L+ G + V +AL YG +GI FQ+ DDVLD +GK G D GK
Sbjct: 183 AAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKY 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL VI AF++G K G+ ++E + A + E +L + A SY ++
Sbjct: 243 TLIVINAFEKGVKL------DIFGKGEATLEETEAAVRTLTECGSLDYVKNLAISYIEEG 296
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
K+ L L D K L+++ D+ + R
Sbjct: 297 KEKLDVLRDCPEKTLLLQIADYMISR 322
>gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 319
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 99/308 (32%), Positives = 166/308 (53%), Gaps = 3/308 (0%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
K+N IL+ S +I + V LI GGK+LRP L A +Y + + L IE
Sbjct: 14 KLNENILEITNSKRRIINEAVSDLIKGGGKKLRPFLMFLAASFGDYDQEKLLQLGSGIEL 73
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H ++LLHDDV+D++ LRRGK A+ +G + +V +GDFLLS++F + + + L +
Sbjct: 74 LHMSSLLHDDVIDNAKLRRGKKTAQHKFGKEEAVFIGDFLLSRSFNIFFKYLDKSTLGKM 133
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ L EGE+ Q +L+++ DY I+ KTA+ F+ + + + ++GV+
Sbjct: 134 NKNVSLLCEGEIEQSEKKFDLEISMRDYYRRIRHKTALFFALSSYLGAYVSGVRGKKLNL 193
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L G+ +G+AFQ+ DD+LD+ GE E GK + +D + G TLPVIL F K +
Sbjct: 194 LYKLGLEIGMAFQIKDDLLDFEGEEEETGKILAQDLKEGIITLPVILLF---NKEKYRNK 250
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
N+ K+ E + ++ AL +++ + + K L LP++ KK L ++
Sbjct: 251 YKRYNNKKLEPEVVASIIADLKVAGALDESQDILLRFINRVKKYLEQLPNNKAKKRLKKL 310
Query: 314 VDFCLQRL 321
V+ ++R
Sbjct: 311 VEAQIERK 318
>gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
Length = 346
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 10/318 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ V+ I+ I + + + + +GGKRLRP++ + A ++ D + A ++E
Sbjct: 27 KIVDEFIMNTIRGIPSTLYEAALHYLRAGGKRLRPLIVVLGARIVGGDEDIAIPGAASVE 86
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--------VIET 124
+HT TL+HDD++D LRRG +WG+ +++ GD L + ++ V
Sbjct: 87 VLHTFTLVHDDIIDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRCLLRALERGVPVE 146
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ +A++ L+ A T+AEG+ + L +V+ DY+ ++K KTA LF++++ + + +A
Sbjct: 147 RVNKAIDILTDAAITVAEGQALDMLLPSMQNVSINDYIEMVKKKTAALFASSIAIGATLA 206
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + LK +N GIAFQ+ DD+L G+ +GK I D R GK TL VI A+ +
Sbjct: 207 GGDEKLTAILKESMINAGIAFQIRDDILGLIGDEKTLGKPIYSDLREGKMTLLVIYAYSK 266
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+ K + + ++E+L+ I+R + A+ + A Y KA +
Sbjct: 267 IDDESRARMKRVLGNRNATLEDLQDVANIIRNSGAIEYADSLAEEYALKAIRLSEEIESR 326
Query: 303 DSSWKKSLMEVVDFCLQR 320
D+ + +V+ F ++R
Sbjct: 327 DNEALQMFRDVIKFMVKR 344
>gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 8/321 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L +D+ + + + + + ++ ++L + GKR+RP + L + +
Sbjct: 7 LFSPVEEDLRLLTENLKQLVGARHPILYAAAEHLFGAKGKRVRPAIVLLISRATMPNQEI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVDDS +RRG +GN+ +VL GDFL +Q+
Sbjct: 67 SPKHRRLAEITEMIHTASLVHDDVVDDSDVRRGIPTVHSYFGNRVAVLAGDFLFAQSSWY 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ LS V LAEGE++Q + ++ E YL KTA L + + + +
Sbjct: 127 LANLDNLEVVKLLSEVIMDLAEGEIQQGLNGFDTTLSIEAYLEKSYYKTASLIANSSKAA 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++GV + L +YG ++G+AFQ+VDD+LD+ G +GK G D ++G T PV+
Sbjct: 187 GCLSGVSAQLADDLYNYGRDIGLAFQIVDDILDFTGSTETLGKPAGSDLKSGNLTAPVLF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A EK + ++ I ++++A ++++++ + + A + Q A L
Sbjct: 247 AL-----EEKPYLEALIEREFAQEGDIEQAIALVKDSKGIERSRELAAHHAQAAVVRLAG 301
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S K++L+++ D+ L RL
Sbjct: 302 LPPSESKQALIDLADYVLSRL 322
>gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
Length = 308
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 131/309 (42%), Positives = 191/309 (61%), Gaps = 3/309 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ V+ +I R+ SDV +I + Y++ +GGKR+RP + L A L Y+G NH LLA +
Sbjct: 1 MKAVDAVIRARLNSDVVLIRTIGDYIVGAGGKRMRPAMLLMMANALGYQGGNHHLLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++++ S A+
Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRSTANAVFGNAASVLVGDYLYSRSFEMMVQSGSMPAMS 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE+ QL + DV+ + YL V++ KTA LF AA +V ++I G
Sbjct: 121 VLSAATTVIAEGEVLQLLNVHDPDVSLDRYLQVVRYKTAKLFEAATQVGAIIGGATTEQE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A +YG ++G AFQL+DDVLDY G +GKN+G+D R GKPT+P+I + GT ++K
Sbjct: 181 AAAAAYGRHIGTAFQLIDDVLDYSGGAEALGKNVGDDLREGKPTMPLIRVMEVGTGQQKQ 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G + +++ +AL T A + A+++L LP S +KSL+
Sbjct: 241 LIQDAIRTG---DADFAAVARAIQDTQALDYTRQAAIAEAALAREALAVLPVSVHQKSLL 297
Query: 312 EVVDFCLQR 320
E F ++R
Sbjct: 298 EFCSFAVER 306
>gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1]
gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1]
Length = 326
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 11/326 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ + ++ VN I K I + + + D YL+ +GGKRLRP++T+A++ +
Sbjct: 2 ELDKYFDEIIKNVNEEIEKYIKGEPKELYDASIYLLKAGGKRLRPLITVASSDLFSGDRK 61
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-------LVGDFLLS 115
A A+E +H TL+HDD++D+ LRRG + WG ++ +LS
Sbjct: 62 RAYKAAAAVEILHNFTLIHDDIMDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFEVLS 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A + + L S +AEG+ + DVTEE+YL +IK KTA LFS
Sbjct: 122 EALEGLDSKRFYMGLSEFSKSVIIIAEGQAMDMEFENRQDVTEEEYLEMIKKKTAQLFSC 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + L++G ++ + LK +G+NLGIAFQ++DD+L + E+GK + D R GK T
Sbjct: 182 SAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEKELGKPVYSDIREGKKT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ VI A ++ G E + KA +++ +L A Y QK+
Sbjct: 242 ILVIKALSLASEA--ERKIIIEGLGSKDQEKIIKAAEVVKSL-SLNYAYEVAEEYYQKSM 298
Query: 296 DSLRCLPDSSWK-KSLMEVVDFCLQR 320
+L + D++ K+L + +F ++R
Sbjct: 299 KALSAIGDNNIAGKALKYLAEFTIKR 324
>gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanocaldococcus jannaschii DSM 2661]
gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methanocaldococcus jannaschii DSM 2661]
Length = 327
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++K++ + + D + + + K+L+F+GGKR+RP LT+ T ++ + + + A A+
Sbjct: 18 LQKIDEELKTYVDKDDK-LYNASKHLLFAGGKRIRPYLTVVTYMLKKDDIEEVLPAAAAV 76
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRGK +V+G ++L GD L ++AF V K +
Sbjct: 77 ELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDNKKAH 136
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + +N T E+YL +I+ KT L A++ + +++A
Sbjct: 137 EVLKILSKACVEVCEGQAMDMEFENYYPTMEEYLDMIRKKTGALLEASVGIGAVMADCNE 196
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+ALK Y +G+ FQ+ DDVLD G+ ++GK +G D R GK T+ VI A + +
Sbjct: 197 EEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDED 256
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + E +K+A I++ ++ + ++AK+ L+ + +K
Sbjct: 257 KKKRLLEILGNKNVKDEEIKEAIEILK--PSIEYAKELMKQKTEEAKEYLKIF-NKDRRK 313
Query: 309 SLMEVVDFCLQRL 321
L ++ DF + R+
Sbjct: 314 VLEDLADFIMSRI 326
>gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
Length = 337
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 8/312 (2%)
Query: 17 FLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
I + S E + +Y++ GKR+RP LTL A + D+ + A +
Sbjct: 24 KRINDALAGCFTKSTPETLYAPARYILEGKGKRIRPFLTLLAAESVCNSSDDALNAALGV 83
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-- 129
E +H TL+HDD++D + LR G+ L W ++L GD +++ A+ + TK+
Sbjct: 84 EILHNFTLMHDDIMDQADLRHGRPTVHLKWDENAAILSGDMMIAFAYECALNTKTDRHAE 143
Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L+ T+ EG+ + L + + T DYL +I KT L SAALE ++
Sbjct: 144 LVHILNDANITICEGQALDMELEQRAEATIADYLDMISKKTGRLISAALEAGGVVGNADA 203
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
QAL ++G +G AFQ+ DD LD + + GK G D NGK T ++ + +
Sbjct: 204 LQLQALVTFGEKIGRAFQVQDDYLDIMADDGKSGKIPGGDVINGKKTYLLLRSIELTEGN 263
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E+ +S I + I E + + I + L + ++A ++ LP +
Sbjct: 264 ERKLLQSIIANKGIEPERVPEIRAIFEQCGVLEEARQLINRDTEEALSAIDPLPFGEGRD 323
Query: 309 SLMEVVDFCLQR 320
L ++R
Sbjct: 324 HLKGFALKLMKR 335
>gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 335
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L ++ + + + + + +M+ ++L+ +GGKR+RPML L A + +
Sbjct: 13 EDLATRIVERLGTIEDRLRASVSTSDDMVRWTGRHLMDAGGKRVRPMLVLLAASLGDIDA 72
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D A +E H A+L HDDV+D + RRG +A +WGN ++L GDFL ++A +
Sbjct: 73 DGVQDAAVLVELTHLASLYHDDVMDSAPTRRGTDSAHALWGNNVAILTGDFLFARA-SGL 131
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A+ S L G+L + K D Y+ V+ KTA L + A + +
Sbjct: 132 SARIGTDAVREHSETFERLCLGQLHETVGPKPGDDPFAHYISVLSDKTASLLALAGSLGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G ++ YG +G+AFQL DDVLD + GK G D R G PT+P +L
Sbjct: 192 SLSGAPQGSADVMRRYGEKVGVAFQLADDVLDLESDAATSGKTPGIDLREGVPTMPTLLV 251
Query: 242 FQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+R + + S L + ++RE+ AL +T A ++A + L
Sbjct: 252 RRRAQDHPDSHSLDIVERLDGDLSSSAALDELVDLLREDPALEETRGLASRTAEEAMEIL 311
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LP + + +L + R
Sbjct: 312 SELPAGAARDALKAFTATLVGRS 334
>gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51]
gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 326
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ V + + + I D L+ SGGKRLRP+LTL +A + A A
Sbjct: 17 ELLIVEERLRESFLRAGDTIKDSCLLLLDSGGKRLRPLLTLQSAQCFGPLNSAALDAAVA 76
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IH A+L+HDDV+D S RRG GNQ +VL GD++ ++AF ++ ++
Sbjct: 77 AELIHMASLIHDDVIDHSDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKHLLTSM 136
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L ++ +GE++Q +L V Y I KT +L ++ + AG
Sbjct: 137 SYLVDAIQSMCDGEIQQAEQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQEA 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+AL YGMNLG A+Q++DD+LD+ G GK D NG TLPVI
Sbjct: 197 VEALGQYGMNLGYAYQIIDDILDFTGNPQVTGKPAAADLLNGYITLPVIYLLD--KPLYG 254
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + +S N+++ + + AL + A Q A +L LP S K L
Sbjct: 255 PWAREMLQARDLSPANVQRIIQALISSGALNEAFTTALRCAQTAVQALSSLPPSPSKTFL 314
Query: 311 MEVVDFCLQRL 321
E+ L R
Sbjct: 315 SELTHTILYRQ 325
>gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
Length = 323
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 84/324 (25%), Positives = 162/324 (50%), Gaps = 11/324 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA----LML 57
K L + +D+ + + + + + ++ ++L +GGKR+RP + L A L
Sbjct: 6 KALTN-IEQDLLILENNLKRMVGAKHPILYAAAEHLFKAGGKRIRPTIILLVALSTTQAL 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ H LA E IHTA+L+HDDV+D+ +RRG + + +VL GDFL +Q+
Sbjct: 65 HILPE-HKRLAEITEIIHTASLVHDDVIDECEIRRGVNTVHNAFSTKVAVLAGDFLFAQS 123
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + E ++ +S V AEGE+RQ + ++ +Y+ KTA L +++
Sbjct: 124 SWYLANLNNLEVVKTISKVITDFAEGEIRQGLTCFDETISMNNYIEKSFYKTASLIASSC 183
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++++ + + YG +LG+AFQ+VDD+LD G +GK G D +NG T P
Sbjct: 184 KAAAILSDTTTNTQNQFYLYGKHLGLAFQIVDDILDIVGSTVSLGKPAGSDLKNGNLTAP 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ A + ++ I +++ KA I++ + + A + Q + +
Sbjct: 244 LLFALEENSEL-----YKLIAREFQHNKDIDKAIEIIKSTNGIQKSYDLAQEHMQASVQA 298
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L+ + + +K+L + ++ + RL
Sbjct: 299 LKKIDNQVAQKNLTYINNYVMNRL 322
>gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis 1002]
Length = 339
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L + M V L+ K +C + I + VK+L +GGKR RPM L + ++
Sbjct: 22 ALNEDISAGMTCVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMFALLASQYGDHPVS 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A +E H ATL HDDV+D++A RRG +A W N ++L GD LL A
Sbjct: 82 EDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILL--AHVSR 139
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + ++ E Y+ VI+ KT VL ++A + +
Sbjct: 140 LMADLGTDTVRHFSETFGDLVTGQMRETIGVGEGDPIEHYMAVIREKTGVLIASAGYLGA 199
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ A
Sbjct: 200 LHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVLYA 259
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + + + + ++ ++ + Y +A+ L L
Sbjct: 260 LREQTPIGEELRATLTG-PVTDDTTVARVLDLLTQSTGRDRALADVHHYLNEAEAQLELL 318
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P ++ ++L + F +QR+
Sbjct: 319 PQNATTEALRNLARFTVQRV 338
>gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
Length = 330
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 180/320 (56%), Gaps = 2/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 13 SLLAPIAEDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTG 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++
Sbjct: 73 HRHELAAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMV 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++
Sbjct: 133 GVGKMRVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAV 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I
Sbjct: 193 LAGADAKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLI 252
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+RGT + + I G F + + AL T A Q A ++ P
Sbjct: 253 ERGTPEQSALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECAKQEAQAAAAAVSSFP 310
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 311 HSIFKESLLELCSYSTARQS 330
>gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147]
gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786]
Length = 330
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 14 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQ 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 74 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 133
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 134 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 194 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAASMGKNAGDDLREGKPTLPLIYLIE 253
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 254 RGTPEQSALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPS 311
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 312 SIFKESLLELCSYSTSRQS 330
>gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266]
gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium phaeobacteroides DSM 266]
Length = 332
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 147/310 (47%), Gaps = 4/310 (1%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+N + ++ + + KY++ GKR+RP LTL + + ++ + +A A+E
Sbjct: 21 INEALASCFSAEAPVTLYAPAKYILDGKGKRIRPFLTLLASEAVCGSSEHALKVALAVEI 80
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--- 130
+H TL+HDD++D + LR G+ W ++L GD +++ A+ + +++ S +
Sbjct: 81 LHNFTLMHDDIMDQAELRHGRPTVHKQWNANVAILSGDMMIAYAYELALQSPSSRQIELV 140
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L+ T+ EG+ + L + T DYL +I K+ L SAALE + +
Sbjct: 141 HILNDANITICEGQALDIELEEKKHATIADYLDMIAKKSGRLISAALEAGGVAGNATDEQ 200
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L ++G +G AFQ+ DD LD + + GK G D NGK T ++ + + + +
Sbjct: 201 LNNLVTFGEKIGRAFQIQDDFLDIMADDGKSGKIAGGDVINGKKTYLLLRSIELTSGDDH 260
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+S I + IS E + + I + L +T + A ++ LP + ++ L
Sbjct: 261 RLLQSIIENNGISAERVPEIRSIYQRCGVLDETRLLIRRDTENALSAVDKLPHAEGREYL 320
Query: 311 MEVVDFCLQR 320
+ ++R
Sbjct: 321 KGFANILVKR 330
>gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
Length = 336
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 3/320 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L D +++ + R+ I D + +L +GGKR R + L A
Sbjct: 18 ELNDRITAGLQEAEDFLRWRLSQGESFITDKISHLALAGGKRFRVVFALLAAQYGKNPTA 77
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A +E H ATL HDDV+D++ RRG +A WGN ++L GD+L + A ++
Sbjct: 78 RKVRDAAVVVELTHLATLYHDDVMDEADRRRGAESANARWGNSMAILAGDYLFAVASEIL 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ + + + E Y+ VI+ KT VL ++A + +
Sbjct: 138 SGLGAHTVRHFADTFGE-LVTGQMRETVGAADGEDAIEHYMKVIQEKTGVLIASAGYLGA 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G + AL +G ++G FQ+VDD++D + E GK G D R G TLPV+ A
Sbjct: 197 LHSGAEQEHVDALAQFGRHMGQIFQIVDDIIDIWADPEESGKTPGTDLREGVFTLPVLHA 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + + +++ +++ + E Y A + L L
Sbjct: 257 MRQEDEVGARLRELLTG-PVTDDAVVEECLELIQRSNGRELAEQDVEHYRGLADEELAKL 315
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+ ++L ++ F L RL
Sbjct: 316 PDNEVTEALRHLLAFSLDRL 335
>gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023]
Length = 326
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I I + + VK LI +GGK LRP L +A E+ + V
Sbjct: 13 LSKDLQEVLQTIESNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S +DVT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 APRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ E ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPFLSQKLDMTDEASEQVLALISKYKGVEQAFKLASKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKSILDR 324
>gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related
protein [Thermoplasma acidophilum DSM 1728]
gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related
protein [Thermoplasma acidophilum]
Length = 322
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVL 66
+E+VN +L+ + S+ + + +Y I +GGKR RP+LT+ + +
Sbjct: 7 LHSKVEEVNARLLETVKSEEPDLDRMARYTIEAGGKRFRPLLTILAYESSTDEPYFKILD 66
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA E IHTA+L+HDD++D+S +RRG+ G +++V D+L ++A+ +
Sbjct: 67 LATGYELIHTASLIHDDIIDNSPMRRGRPTLSYKEGVNNAIVVADYLFAKAYELGSRYGP 126
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + LAEG++ + NL+++E+ Y +I++KTA F A +++ A
Sbjct: 127 IVSKVMADASSR-LAEGQILEAVNLGNLNISEDTYYRIIENKTAHFFEACARGATIAANA 185
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ R L + NLG+AFQ+ DD+LD G+ GK D ++ TLP+I A
Sbjct: 186 DLNTRNMLSGFAFNLGMAFQVTDDILDITGDDKYTGKPTFVDIKHDALTLPIIYALHNSD 245
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +++ IN ++L I + A+ + A + A D L+ + S
Sbjct: 246 ENDRDKIVGMINGSIEIDKDL--LKRIFLRSGAIDYSFGIAKRFITSAMDYLKNVTRSPD 303
Query: 307 KKSLMEVVDFCLQRL 321
LME+ + R+
Sbjct: 304 IDLLMELALMVIDRI 318
>gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae
H36B]
gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae
CJB111]
gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae
CJB111]
gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae
H36B]
Length = 326
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
K++++ N LI +RI + I + L +GGK+LRP + +
Sbjct: 11 LKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F ++
Sbjct: 71 KKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + GEL Q+ L N YL I KTA LF A + +
Sbjct: 131 MADTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA +
Sbjct: 191 GGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGVYSLPLLLAIE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ F ++ E+++K ++ +R + + A + +KA + LP
Sbjct: 251 ---ENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQ 307
Query: 304 SSWKKSLMEVVDFCLQRL 321
SS KK L+++ ++ L+R
Sbjct: 308 SSAKKQLLQLTNYLLKRK 325
>gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 331
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ V + + + I D L+ SGGKRLRP+LTL +A + A A
Sbjct: 22 ELLVVEERLRESFLRAGDTIKDSCLLLLDSGGKRLRPLLTLQSAQCFGPLNSAALDAAVA 81
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IH A+L+HDDV+D S RRG GNQ +VL GD++ ++AF ++ ++
Sbjct: 82 AELIHMASLIHDDVIDHSDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKHLLTSM 141
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L ++ +GE++Q +L V Y I KT +L ++ + AG
Sbjct: 142 SYLVDAIQSMCDGEVQQAEQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQKA 201
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+AL YGMNLG A+Q++DD+LD+ G GK D NG TLPVI
Sbjct: 202 VEALGQYGMNLGYAYQIIDDILDFTGNPQVTGKPAAADLVNGYITLPVIYLLD--KPLYG 259
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + +S N+++ + + AL + A + A +L LP S K L
Sbjct: 260 PWARDMLQARDLSPANVQRIIQALISSGALNEAFNTALHCAETAVQALSSLPPSPSKTFL 319
Query: 311 MEVVDFCLQRL 321
E+ L R
Sbjct: 320 SELTQTILYRQ 330
>gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium
genitalium ATCC 33030]
gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium
genitalium ATCC 33030]
Length = 386
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 153/321 (47%), Gaps = 4/321 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YR 60
+ L + ++ V L+ +R+ S + + + V +L +GGKR RPM+ + + + +
Sbjct: 68 QELAERVAAGLDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQ 127
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+N V A +E +H ATL HDDV+D++A RRG +A W N ++L GDFLL++A +
Sbjct: 128 AENVVKGATIVEMVHLATLYHDDVMDEAAKRRGVDSANARWTNTVAILSGDFLLAEASRI 187
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + + + ++ E YL+VI+ KT VL ++A +
Sbjct: 188 MSEIDTATVAHFADTFS--DLVTGQMRETVGPGEGDPVEHYLNVIREKTGVLIASAAFLG 245
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +G ++ + LK G +G+ FQ+VDDV+D + + GK G D R G TLPV+
Sbjct: 246 ATHSGAKDEDVRTLKELGEAVGMIFQIVDDVIDIFSDSTQSGKTPGTDLREGVFTLPVLY 305
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + I ++ +A ++ + Y L
Sbjct: 306 AMRDSSPAGEELRAMLTG-PLIDDADVARALDLIAQTDGRQRALDDVRGYLADVDKHLDA 364
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD +++ ++ + ++R+
Sbjct: 365 LPDIPANRAIRQISRYTVERV 385
>gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 321
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ L ++++V L+ +R +D + + L+ +GGKR+RP+ L L +
Sbjct: 5 DIYLLYRHELDRVERLLDERAHADHADLAKAGRTLLEAGGKRIRPLFALICGLGEREWSE 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E IH ATL+HDDV+D + LRRG+ R +GN ++ GD+L ++A ++
Sbjct: 65 DVAKVAAALEMIHMATLVHDDVIDRADLRRGRPTVRKSYGNLAAMYTGDYLFARAIQLLA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + E ++ L EGE+ Q+ N YL I KTA+L S + ++ ++
Sbjct: 125 EVDNLEVHRLMARGIVLLCEGEIEQIQDFYNWSQGVMTYLRRIHRKTALLISLSCQLGAM 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G AL +G +G+AFQ+VDD+LD+ G +GK +G D R G TLP +LA
Sbjct: 185 VGGAHKREVAALARFGHAVGMAFQIVDDLLDFTGAAEIVGKPVGGDLRQGNLTLPALLA- 243
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + + E+ ++A ++ + AL D E A Y +K++ L+ +
Sbjct: 244 --ASRPGFGERLRALVREGMREEDAEEAIRLVVASGALADAERLAERYLEKSRHLLQAVS 301
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ + LM + F ++R
Sbjct: 302 RETVRAQLMGLTSFIIRRQ 320
>gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2]
gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 324
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 159/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ L + S ++ VV ++ GK +RP+L L A +
Sbjct: 4 ISLIRTPIEAELGDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGAI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A ++E +HTA+L+HDDVVD+S+ RRG+++ ++ N+ +VL GD+LL+ +
Sbjct: 64 CPSTLHAAVSLELLHTASLVHDDVVDESSERRGQLSVNAIFNNKVAVLTGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T S ++ +S + LA+GEL QLS N +EE Y VI+ KTA LF+A + +
Sbjct: 124 AELTNSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ GV + + G +GI FQ+ DD+ DY + E+GK G D GK TLP +
Sbjct: 184 AFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF-DNKEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + +G +++ + ++EN + Y QKA + L
Sbjct: 243 VLNTTKNEEAQEIAIKVKEGTATLDEIAHLISFIKENGGIEYAVQTMNVYKQKAFNLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +L +D+ + R
Sbjct: 303 LPDSDICAALRAYLDYVVDR 322
>gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
ATCC 6940]
gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
ATCC 6940]
Length = 334
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + + V L+ I + + + V +L +GGKR RPM+ L + G
Sbjct: 17 QLSERISAGIAAVEELLHHEIDRGQDFVKEKVSHLSSAGGKRFRPMMALLASEFGARPGS 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 PEVVKAATVVEMVHVATLYHDDVMDEAERRRGVESANFRWTNSVAILAGDVLLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + V Y+ VI+ KTAVL ++A + +
Sbjct: 137 SQLDTHTVEHFSETFEELVTGQMRETIGAGEANAVE--HYMAVIREKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG AL+ G +G+ FQ+VDD++D + E GK G D R G TLPV+ A
Sbjct: 195 YHAGATPEQAAALRQIGGAIGMIFQIVDDIIDIFSDSKESGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + ++++A ++R++ + Y + ++ L L
Sbjct: 255 LEE-EGTVGDELRGLLTGPLGDDASVERAIELLRQSGGREKAMNDVHGYLRVVEEQLSVL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+ + ++L ++ D+ ++R+
Sbjct: 314 PECAASEALRQLADYTVRRV 333
>gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter
atlanticus HTCC2559]
gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter
atlanticus HTCC2559]
Length = 324
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ + E + ++ + + + Y++ GGKRLRP+L L +
Sbjct: 1 MQEISSY----REAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGE 56
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E H +L+HDD++DD+ LRRGK W T +L GD +L A+
Sbjct: 57 DYTKGLDAALAVEVFHNFSLVHDDIMDDAPLRRGKDTVHEKWDLNTGILSGDAMLINAYQ 116
Query: 120 MVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + + A + EG+ + DVT +YL +I+ KTAVL AA
Sbjct: 117 LFENYDGSTFKELAKLFTKTAIEVCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVLVGAA 176
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ +++A ++S + + +G LG+AFQL DD LD G+ GK +G D K T
Sbjct: 177 LQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGDPKTFGKQVGGDIIENKKTF 236
Query: 237 PVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ A + TK + + + K ++ I + A T Y +KA
Sbjct: 237 LYLKAIENSTKEDAKQLEHLYSLSPKRPENKIETVKTIFENSGASELTRQEIEKYTKKAF 296
Query: 296 DSLRCLPDSSWKKS-LMEVVDFCLQRL 321
+ L + S KK L+E + + R
Sbjct: 297 ECLDHISISEDKKKGLIEFGNILMNRT 323
>gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
Length = 324
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 159/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ L + S ++ VV ++ GK +RP+L L A +
Sbjct: 4 ISLIRTPIEAELGDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGAI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A ++E +HTA+L+HDDVVD+S+ RRG+++ ++ N+ +VL GD+LL+ +
Sbjct: 64 CPSTLHAAVSLELLHTASLVHDDVVDESSERRGQLSVNAIFNNKVAVLTGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T S ++ +S + LA+GEL QLS N +EE Y VI+ KTA LF+A + +
Sbjct: 124 AELTTSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ GV + + G +GI FQ+ DD+ DY + E+GK G D GK TLP +
Sbjct: 184 AFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF-DNKEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + +G +++ + ++EN + Y QKA + L
Sbjct: 243 VLNTTKNEEAQEIAIKVKEGTATLDEIAHLISFIKENGGIEYAVQTMNVYKQKAFNLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS +L +D+ + R
Sbjct: 303 LPDSDICAALRAYLDYVVDR 322
>gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 337
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ V + + E+ ++L+ +GGKRLRP+L L TA + E + A +
Sbjct: 23 LAYVEERLRDSVTHADELANTTSRHLVDAGGKRLRPLLALLTAELGESARPEVIDAAVVV 82
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H ATL HDDV+D + LRRG AA VWGN ++L GD L ++A V +
Sbjct: 83 ELTHLATLYHDDVMDSAPLRRGAPAAHEVWGNSVAILTGDLLFARASVTVAGLGPEAVRW 142
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L G+L + + + + YL V+ KTA L + + + AG + +
Sbjct: 143 QAETFER-LCLGQLHETVGPRPDEDPVQHYLQVLSDKTASLIATSARFGARYAGCRPEIV 201
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ + ++G +G+AFQL DDV+D + GK G D R G PT+PV+L ++
Sbjct: 202 EIVANFGEKVGVAFQLADDVIDLTSDGALTGKTPGTDLREGVPTMPVLLLRSHVAASDEP 261
Query: 252 FWKSTI-----NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ S E L A +R++ + +T +A ++ Q A L LPD
Sbjct: 262 SAGDLALLELLDSDLTSDEALAGAVAALRDHPVVAETRAQAVAWAQDAVAELVPLPDGPV 321
Query: 307 KKSLMEVVDFCLQRL 321
K +L+ + + R
Sbjct: 322 KDALVAFAESLVDRT 336
>gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
Length = 334
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 3/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-R 60
+ L M V + + S + + +L+ +GGKR RP+L L A E+
Sbjct: 15 EALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRPLLVLLAAETGEHPD 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + AC +E H A+L HDDV+D++ LRRG V+A W N ++L GDFL S++ +
Sbjct: 75 ADEVITAACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVAILTGDFLFSKSSEL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E L EG++ + + YL V+ KT L + +
Sbjct: 135 TAELGPDAVRVQARTFTR-LVEGQILETVQPGPGEDPLAHYLDVVAGKTGSLIATSAHYG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G V +AL +YG +G AFQL DD+LD + E GK G D R G PTLPV++
Sbjct: 194 ARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGTDLREGVPTLPVLM 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + D + +A ++R + AL + +AK L
Sbjct: 254 ARASTDPADARLLELLGGD-LTDDDRHAEALRLLRAHPALGQARDYVIARAHEAKAHLAV 312
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P + +L D R +
Sbjct: 313 VPPGPVRDALEAFADLVAVRSS 334
>gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae
A909]
gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae
A909]
Length = 326
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
K++++ N LI +RI + I + L +GGK+LRP + +
Sbjct: 11 LKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG + + +G +V D L + F ++
Sbjct: 71 KKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTRDLLFTVFFDLILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + GEL Q+ L N YL I KTA LF A + +
Sbjct: 131 MADTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA +
Sbjct: 191 GGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGVYSLPLLLAIE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ F ++ E+++K ++ +R + + A + +KA + LP
Sbjct: 251 ---ENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQ 307
Query: 304 SSWKKSLMEVVDFCLQRL 321
SS KK L+++ ++ L+R
Sbjct: 308 SSAKKQLLQLTNYLLKRK 325
>gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae
2603V/R]
gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae
COH1]
gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae
2603V/R]
gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae
COH1]
Length = 326
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
K++++ N LI +RI + I + L +GGK+LRP + +
Sbjct: 11 LKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F ++
Sbjct: 71 KKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + GEL Q+ L N YL I KTA LF A + +
Sbjct: 131 MADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA +
Sbjct: 191 GGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGIYSLPLLLAIE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ F ++ E+++K ++ +R + + A + +KA + LP
Sbjct: 251 ---ENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQ 307
Query: 304 SSWKKSLMEVVDFCLQRL 321
SS KK L+++ ++ L+R
Sbjct: 308 SSAKKQLLQLTNYLLKRK 325
>gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott
A]
Length = 324
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 6 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFDAVKNASVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 186 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A Y +KA + L
Sbjct: 245 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KQAEDVATVYLKKAVEIL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 301 DSLPQVPELKPLKQIVRVLDKR 322
>gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes serotype 4b str. F2365]
gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes serotype 4b str. F2365]
gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 220]
Length = 321
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFDAVKNASVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KQAEDVATVYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1]
gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1]
gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
Length = 324
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 7/325 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + + ++ V + + +++ Y++ GGK LRP L++ +A+
Sbjct: 4 LSSIYAPINEGLKGVEDEFKLVSESRKKSFPEMAEMLDYIL-VGGKVLRPALSMLSAMCF 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ LA + E +H ATL+HDD +D + RRG+ VWG + ++L+GDFL + A
Sbjct: 63 GAGIKKVLPLATSSEMLHIATLVHDDAIDKADTRRGRRTVNAVWGLEKAILLGDFLFAHA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
ET + + S +A GEL+Q S N D + E+YL I KTA LF A
Sbjct: 123 AETAAETGNMGIVTLFSQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMAT 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++A S + ++SYG NLG++FQ+VDD+LD+ G +MGK IG D NG TLP
Sbjct: 183 KGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPIGSDLNNGTVTLP 242
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L R D ++ KA ++ + + + A Y A +
Sbjct: 243 ALLLMDRYPDNNPIKDMLNATDRIP---HVAKAVEMINSSDIIDLSYKEAKRYADLACRN 299
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP ++ ++SL ++ +F ++R N
Sbjct: 300 LSQLPKTAARESLYQLAEFIVERKN 324
>gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z]
gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z]
Length = 322
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 158/326 (48%), Gaps = 13/326 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L++ KV+ + + + +L+ SGGKRLRP L L +A + +
Sbjct: 2 KLDEYLKSVAAKVDMEADEYSKAVDSTLQKAASHLLVSGGKRLRPALVLLSAESIRKGAS 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ A A+E+ HT TL+HDD++D +LRRG+ +VW T++L GD L + AF +
Sbjct: 62 EDIFQAALALEWTHTFTLVHDDIMDGDSLRRGRPTVHVVWNEATAILAGDVLYANAFEYL 121
Query: 122 IETKS------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
K+ A++ L+ L EG+ +S DVT E+YL +++ KT VL++A
Sbjct: 122 CRVKNATAESKVIAVQMLAHSCHELCEGQQEDVSFETRSDVTLEEYLSMVRKKTGVLYAA 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + + +AG AL + G+N GIAFQ+ DD++D GK+ D R K +
Sbjct: 182 AAGIGAALAGGDVKQISALYTLGLNTGIAFQIQDDIIDLLAPSEVSGKDQASDLRENKQS 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ ILA G + ++S E + +A ++ + L A +K
Sbjct: 242 ILAILARDGGIDLS------AYHKPELSKEEISEAISLLETSGVLDKARGMAEKLINDSK 295
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
L LPDS K ++E+ DF + R
Sbjct: 296 AGLSVLPDSEAKTLILEMADFFVARK 321
>gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
17982]
gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
17982]
Length = 337
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 8/326 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
LE +E V +L + S ++ ++ ++L +GGKR+RP+LTL A + E
Sbjct: 12 DLESRITPGLEVVERRLLDAVSSSRDLTDELTRHLAVAGGKRMRPLLTLVCAQLGEPERA 71
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A
Sbjct: 72 LDEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARASL 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + L EG+L + + + YL V+ KT L S A
Sbjct: 132 LVASLGPEMVAHHARTFER-LCEGQLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASF 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP-- 237
+L++G + + +G +G+AFQ+ DDVLD + GK G D R G TLP
Sbjct: 191 GALLSGAGKLMADVVSDFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVL 250
Query: 238 --VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ S E L +R + L +T A ++ A
Sbjct: 251 LLRRREAAGTIDEVGARILRELTGDLSSDEALASVVEQLRSHDVLEETRELARTWANDAV 310
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L LP K +L + + RL
Sbjct: 311 ATLAPLPKGEAKTALEAFANLMVDRL 336
>gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 1816]
Length = 312
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 7/314 (2%)
Query: 9 LKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD++ V + K + + E D +L+ +GGKR+RPM +A + D
Sbjct: 2 QKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKN 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 62 ASVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKD 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 122 VAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQ 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 182 SEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP----VFFAM 237
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + + E + +++ A E A +Y +KA + L LP
Sbjct: 238 EDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KQAEDVATAYLKKAVEILDSLPQVPE 296
Query: 307 KKSLMEVVDFCLQR 320
K L ++V +R
Sbjct: 297 LKPLKQIVRVLDKR 310
>gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
Length = 326
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + + + +I SGGK LRP L TA EY D +
Sbjct: 13 LQKDLKEVLVTIEKNIKIRDKNVAENINAMIHSGGKLLRPAFVLLTAQAGPEYNVDRSIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDV+DD+ +RRG +G + +V GD+L F +
Sbjct: 73 VASALEVLHMATLIHDDVIDDADMRRGVPTIHSKFGRKYAVYTGDYLFCVCFKILSAHAD 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E ++ S + GEL Q+ +++VT +DYL I KTA LF+ + ++ +
Sbjct: 133 SVENIDFNSKNIEKILMGELNQMKDLYHMNVTVKDYLTRISGKTAQLFALSCYSGAVSSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
K+ G +G+AFQ++DD+LDY + +GK + D + G +LP+I A Q
Sbjct: 193 APRKTLYTAKNAGHFIGMAFQIIDDILDYTSTDDGLGKPVLNDVKQGNYSLPLIYAMQ-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + F +++ +L+ ++++++ + A Y +KA + LP
Sbjct: 251 -KHQDEFLPLLEKREEMTDTDLQALAVLVKKHNGVEQAFELADKYTKKAIKEIHKLPSGK 309
Query: 306 WKKSLMEVVDFCLQRLN 322
++ ++ + L R N
Sbjct: 310 YRDHMLSITLSVLNRKN 326
>gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 326
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 145/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A E+ + V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S ++VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDAGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ + ++ ++ + + A Y KA ++ LP
Sbjct: 251 -GHLAEFEPLLSQKLDMTDDASEQVLALISKYNGVEQAFKLANKYTNKALREIKKLPAGV 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKSILDR 324
>gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47]
Length = 326
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 16/325 (4%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--------- 60
+ + V+ + + + S E + V+++ GGKRLRP L L + +
Sbjct: 2 ESLAAVDARLHRELQSRYEALVPVLRHGTQLGGKRLRPALLLLSGAAMHADRTSKNPLTT 61
Query: 61 -----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++H+++A +E +HTATL+HDDV+D +A RR W + TS+L+GD+L +
Sbjct: 62 EELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTSILLGDYLFA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
Q+F + S A + A + EGELRQ+ LD+ EE YL +I+ KTA L
Sbjct: 122 QSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIRGKTAELTRV 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ ++ + ++G S +A +G +LGIAFQ+ DD LD G+ +++GK +G D + GK T
Sbjct: 182 SCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGDDDDVGKTLGTDLQQGKIT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP+I + + + L + ++R++ A T A SY + A
Sbjct: 242 LPLIRLLRHEDTAVATAALDALRLPP--EDRLARVMPLLRKSDAAEYTRKVAESYRRSAI 299
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+++ SS +SL + DF + R
Sbjct: 300 EAISGFAPSSALESLKTIADFAVDR 324
>gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
Length = 367
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 153/317 (48%), Gaps = 3/317 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +V + + I + + ++L+ +GGKR+RP+L L A + + V
Sbjct: 52 ITTNLARVEKKLREAIANSDPLADATSRHLVEAGGKRIRPLLALLCAHLGDASRPAVVQA 111
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + RRG A VWGN +VL GD + ++A +V E S+
Sbjct: 112 AVVVELTHLATLYHDDVMDSAPFRRGAPTAHEVWGNSVAVLTGDLIFARASILVSELGSR 171
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G+L + + + E YL VI KT L +A+ ++ ++ AG
Sbjct: 172 ALGIQARTFER-LCLGQLHETVGPRPDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGAD 230
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L YG +G+AFQL DDV+D G + GK+ G D R G PTLPV+L
Sbjct: 231 EAYEPLLVEYGEKIGVAFQLADDVIDVTGIKVKSGKSPGTDLREGVPTLPVLLLRNAAAD 290
Query: 248 REKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+++ + I+ S E L A +R++R ++ A ++ +A +L LP+
Sbjct: 291 GDQSAVELLKLIDGDLSSDEALAAAVAGLRDHRVTAESWVVARAWADEAIAALAPLPEGV 350
Query: 306 WKKSLMEVVDFCLQRLN 322
K SL + R +
Sbjct: 351 VKSSLTSFALAVVDRAS 367
>gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6]
gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6]
Length = 317
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 153/314 (48%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + K + D + + K+L+ +GGKR+RP L++ T L+ + + A ++
Sbjct: 8 LSKIDSELKKYVEKDTK-LYGASKHLLLAGGKRVRPYLSIITYLLKKDDITEILAPALSV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRG ++G ++L GD L ++AF + +
Sbjct: 67 ELIHNYTLVHDDIMDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSNIEDSNKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ V + T +Y +I KT L A +E+ +++A
Sbjct: 127 EVLKVLSKACVEVCEGQTDDMEFEERFPTLYEYFDMISKKTGALIVAPVEIGAVMADCTP 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+AL +Y +G+ FQ+ DDVLD G+ +GK +G D GK T+ VI A + ++
Sbjct: 187 EEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIYAMENLSED 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + + + +A I+ ++ + ++AKD L+ D+ +K
Sbjct: 247 KKERLLQILGNKDATADEVSEAIAIL--ADSIEYAKNTMKKATEEAKDYLKIF-DAEKRK 303
Query: 309 SLMEVVDFCLQRLN 322
+L + DF ++R++
Sbjct: 304 NLESIADFIIERIH 317
>gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262]
gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262]
Length = 326
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I I + + VK LI +GGK LRP L +A E+ + V
Sbjct: 13 LSKDLQEVLQTIESNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S +DVT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 APRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F ++ + ++ ++ + + + A Y KA ++ LP +
Sbjct: 251 -GHLAEFEPLLSQKLDMTDDASEQVLALISKYKGVEQAFKLASKYTNKALREIKKLPAGA 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKSILDR 324
>gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 326
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 144/315 (45%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
D+++V I K I + + VK LI +GGK LRP L +A ++ D V
Sbjct: 13 LSDDLKEVLQTIEKNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPDFDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S +DVT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A +
Sbjct: 193 ASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F +S ++ ++ + + A Y KA ++ LP S
Sbjct: 251 -GHLAEFEPLLSQKLAMSDAASEQVLALISKYNGVEQAFKLANKYTNKALREIKKLPAGS 309
Query: 306 WKKSLMEVVDFCLQR 320
++ + + L R
Sbjct: 310 YRDDMYRLTKSILDR 324
>gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4]
gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4]
gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
Length = 324
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ K+ E+ L + S ++ +V+ Y+ GK +RP+L L A +
Sbjct: 4 LQQIKLPIDKEFEEFRRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ +
Sbjct: 64 NDSTLHAALSLELLHTASLVHDDVVDESDKRRGQSSVNAIYNNKVSVLVGDYMLATSLKH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T+ ++ ++ + L+EGE+ QL+ + +EE Y VI+ KTA LF+A+ E
Sbjct: 124 SAMTREITIVDLVACLGQNLSEGEIIQLANINASEFSEEVYYDVIRKKTAALFTASAEAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ + + + + +G +GIAFQ+ DD+ D +E+GK G D R GK TLP +
Sbjct: 184 AISVHASDEMVKNARLFGEMIGIAFQIKDDIFD-YYSSDEIGKPTGNDMREGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E I S E++ + + + Y KA L
Sbjct: 243 VLNTFDDEEMRKLALCIRSLDASDEDIARFIEYTKVKGGIEYARQAMVDYRNKA---LAL 299
Query: 301 LPDS---SWKKSLMEVVDFCLQR 320
LP S + K +L +D+ ++R
Sbjct: 300 LPQSAGQAVKDALTAYIDYVIER 322
>gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
Length = 465
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 23/336 (6%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC------SDV---------EMIPDVVKYLIFSGGKRLR 46
L + D+ +V IL + SD ++ + KY GKR+R
Sbjct: 136 NELFKIVESDLSQVTRNILDTLSVGAGASSDYAPYLSKKTSPVLVSMSKYYFELKGKRIR 195
Query: 47 PMLTLATALMLEYRGDN-HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105
P + L + L + LA +E IHTA+L+HDDV+D+++ RR ++ + N+
Sbjct: 196 PTIVLLLSKALSANVQKTQIKLAEVVEMIHTASLVHDDVIDEASTRRDVLSINQSYSNKL 255
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
++L GDFLL++A ++ ++ + E +SL L EGE Q S + YL
Sbjct: 256 AILCGDFLLARASLILSTIRNSDVTECMSLALAELVEGEFMQAKSSGVSS--FDHYLKKT 313
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT L + + +++++G ++ +G NLG+AFQ++DD+LDY G + GK +
Sbjct: 314 YLKTGSLITNSCRSAAILSGADQNIVNISTEFGKNLGLAFQIIDDLLDYTGSAEQCGKAV 373
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D G T PV+ A +E + I ++++A ++ +++ + T
Sbjct: 374 SVDLNLGLATAPVLFAT-----QEFPQLEDLIKRKFSKEGDVEEAKRLVAQSQGIEKTRN 428
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y A +SL LP S + L+ + + R
Sbjct: 429 LAIEYVNLAIESLLKLPQSDSRDLLIALSHTVVTRT 464
>gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
Length = 327
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 13/326 (3%)
Query: 10 KDMEKVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
++ ++ + L+ + S V + D V Y++ GGKRLRP+LTL +A M + D
Sbjct: 2 NEISQLRTVFLEALNSRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A+E H TLLHDD++DD+ LRRGK + W T +L GD +L A+ +
Sbjct: 62 MDAAIAVEVFHNFTLLHDDIMDDADLRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSY 121
Query: 125 KSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + T + EG+ + DVT +Y+++IK KT+VL AL++ +
Sbjct: 122 DPETFYWLNQVFSKTALEVCEGQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IAGV +Q + YG+N+G+AFQL+DD LD G+ GK +G D R K T + +
Sbjct: 182 IIAGVNKKEQQLIYDYGINIGLAFQLMDDYLDAFGDPATFGKEVGGDIRENKKTYLYLKS 241
Query: 242 FQRGTKREKNFWKSTINDGKISVENL----KKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + ++ +++ E + + + E+ + T+ SY KA +
Sbjct: 242 VEDQGCATELKEWFAMDYQEMNEEQIETKKETVKVFFEESGGALATQDAIKSYTDKALNI 301
Query: 298 LRCLPDS-SWKKSLMEVVDFCLQRLN 322
+ L S KK L + R++
Sbjct: 302 IEQLAISDDSKKQLTAFSLDLMSRVS 327
>gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
Length = 334
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRG 61
L + M V L+ + + I D V++L +GGKR RPM+ L + E +
Sbjct: 17 QLTERINAGMAAVEDLLNTELDRGQDFIKDKVRHLSLAGGKRFRPMMALLASEFGERSQS 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++
Sbjct: 77 PEVVKAATVVEMVHVATLYHDDVMDEAERRRGVDSANFRWTNSVAILAGDALLAHASRLM 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + V VI+ KTAVL ++A + +
Sbjct: 137 SQLDTHTVEHFAETFEELVTGQMRETIGAGEANAVEHYT--AVIREKTAVLIASAGYLGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG +AL+ G +G+ FQ+VDDV+D + E GK G D R G TLPV+ A
Sbjct: 195 YHAGAGPEQCEALRQIGAAVGMIFQIVDDVIDIFSDSEESGKTPGTDLREGVFTLPVLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +++ A ++ ++ +Y + +D L L
Sbjct: 255 LEEEGEVGDELRALLTG-PLEDDASVQCAIELLWQSGGRDKALADVNAYLRVVEDQLSLL 313
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P+ + ++L ++ D+ +QR+
Sbjct: 314 PECTASEALRQLADYTVQRV 333
>gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
Length = 366
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 4/311 (1%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
K+N + + + + +Y++ GKR+RP LTL + + +N + +A A+E
Sbjct: 54 KINDALGTCFEKQSPVTLYEPARYILEGKGKRIRPFLTLLASEAVSGSSENALNVALAVE 113
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--- 129
+H TL+HDD++D + LR G+ L W ++L GD +++ A+ + ++ KS
Sbjct: 114 VLHNFTLMHDDIMDQADLRHGRPTVHLEWNVNAAILSGDMMIAYAYELALQAKSSRHAEL 173
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ L+ T+ EG+ + L + D T DYL +I KT L SAALE + +
Sbjct: 174 VHILNDANITICEGQALDMELEEKKDATIADYLDMIAKKTGRLISAALEAGGVAGNATDE 233
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++L +G +G AFQ+ DD LD + + GK G D NGK T ++ + + + RE
Sbjct: 234 QLRSLVLFGEKIGRAFQIQDDYLDIMADDGKSGKIAGGDVMNGKKTYLLLRSLELTSGRE 293
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ S + IS + + + I L +T S ++A ++ LP + ++
Sbjct: 294 HDLLHSIFMNKGISADRVPEVKAIYERCGVLEETVALINSITEEALSAIDSLPYAEGREY 353
Query: 310 LMEVVDFCLQR 320
L + ++R
Sbjct: 354 LKGFSNILMKR 364
>gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
49030]
gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
49030]
Length = 345
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + ++ + +++ V ++ + +L+ +GGKR+RPML L + +
Sbjct: 24 EEMTNMLVGELQHVETVLDAAASQTSAFADETSHHLMRAGGKRVRPMLVLLCSQLGGGVS 83
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E +H A+L HDDV+D++ RRG ++A WGN ++L GD L ++A +
Sbjct: 84 PRVHTAAAAVELVHLASLYHDDVMDEAPKRRGALSAHEKWGNNVAILTGDLLFARASQLS 143
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+E ++ L G+L + + D E YL V+ KT L SA+ +
Sbjct: 144 LEVGAEAMRVQAETFER-LVLGQLHEFVGTTESDDPIEHYLSVLADKTGSLISASCQFGV 202
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + + +K YG +G+AFQL DDV+D + + GK G D R G TLPV+LA
Sbjct: 203 IASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVDGKDSGKTPGTDLREGVATLPVLLA 262
Query: 242 FQ--RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + ++ L++A + + L T A ++ +A ++L
Sbjct: 263 RKAAQAGDESAAEVVAKVDADLTEDAALEEARQALAGHEVLEQTRAEARAWADRAVEALA 322
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LPD K +L ++R
Sbjct: 323 PLPDGEIKDALATFAYGTVER 343
>gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB]
gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB]
Length = 317
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + + D + + K+L+F+GGKR+RP L++ T L+ + A ++
Sbjct: 8 LSKIDSELENYVEKDTN-LYNASKHLLFAGGKRIRPYLSVLTYLLKRDDISEVLAPAISV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRGK +V+G T++L GD L ++AF + +
Sbjct: 67 ELIHNYTLIHDDIMDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAFEALSNIGDSKKAL 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ V +N T E+YL +I KT L A +E+ +++A +
Sbjct: 127 EVLKVLSKACVEVCEGQTDDMEFENEFPTLEEYLSMISKKTGALIVAPIEIGAIMAECSS 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+AL +Y +G+ FQ+ DDVLD G+ +GK +G D GK T+ VI A +
Sbjct: 187 EEREALYNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDILEGKKTIIVIHAIENLPND 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + S E + +A +I+ + ++ + + +AK+ L+ DS +K
Sbjct: 247 KKERLLQILGNKNASKEEIAEAIVIL--SDSIEYVKDIMKNATNEAKECLKIF-DSERRK 303
Query: 309 SLMEVVDFCLQRLN 322
+L +V DF ++R++
Sbjct: 304 NLEKVADFIIERIH 317
>gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae
NEM316]
gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
Length = 326
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
K++++ N LI +RI + I + L +GGK+LRP + +
Sbjct: 11 LKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F ++
Sbjct: 71 KKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + GEL Q+ L N YL I KTA LF A + +
Sbjct: 131 MADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA +
Sbjct: 191 GGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLTQGVYSLPLLLAIE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ F ++ E+++K ++ +R + + A + +KA + LP
Sbjct: 251 ---ENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQ 307
Query: 304 SSWKKSLMEVVDFCLQRL 321
+S KK L+++ ++ L+R
Sbjct: 308 NSAKKQLLQLTNYLLKRK 325
>gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265]
gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium phaeovibrioides DSM 265]
Length = 335
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 4/311 (1%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++N + + + + +Y++ GKR+RP LTL + + DN + +A A+E
Sbjct: 23 RINDALGQCFSATTPETLYAPARYILEGKGKRIRPFLTLLASEAVSGSSDNTMKVALAVE 82
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-- 130
+H TL+HDD++D++ LR + W + ++L GD +++ ++ + ++ +S
Sbjct: 83 VLHNFTLMHDDIMDEADLRHNRPTVHRKWDDNVAILSGDMMIAYSYELALQAESHRHCEL 142
Query: 131 -EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L+ T+ EG+ + L D T DYL +I KT L SAALE + A
Sbjct: 143 IHILNHANITICEGQALDMELEDKTDATIADYLDMISKKTGRLISAALEAGGVAADATKE 202
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+L ++G +G AFQ+ DD LD E + GK G D NGK T ++ + + + +
Sbjct: 203 QLMSLVTFGEKIGRAFQIQDDYLDIMAENGKSGKMTGGDVINGKKTYLLLRSLELTSGED 262
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ S + I E + + I L +T + ++A L LP +
Sbjct: 263 HDLLHSIYMNKGIEKERVPEIKAIFERCGVLEETARLINTDTEEALSVLENLPHPEGRDY 322
Query: 310 LMEVVDFCLQR 320
L + ++R
Sbjct: 323 LRGFANILMKR 333
>gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas
sputigena ATCC 35185]
gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas
sputigena ATCC 35185]
gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
Length = 324
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 166/319 (52%), Gaps = 6/319 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHV 65
L KD+ + +L+ + S V+ I ++ +L+ SGGKRLRP L L A ++ +
Sbjct: 9 LIKKDLALLEEELLQAVVSPVDRITEIGTHLVKSGGKRLRPALFLLAARSSKDFDAKKMM 68
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET 124
LA A+E IH A+L+HDDV+D + RRG V A +WGNQ ++L GD+ ++AF +V
Sbjct: 69 PLAVALELIHMASLVHDDVLDHADTRRGAVTANAMWGNQQAILSGDYFFARAFLLIVENG 128
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ ++ + L+ GE+ Q E+Y I KTA + E+ ++
Sbjct: 129 FGERVSGRVAQLIMDLSSGEIIQNKELYRASRDVEEYYERIAKKTANFLAICCELGAIAT 188
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L++YG +G+AFQ+ DD+LD ++GK G D G TLPVI A +
Sbjct: 189 NLGAEAERGLRAYGKYVGMAFQITDDLLDLTSNEKKIGKPAGNDIHEGIVTLPVIRALEV 248
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPD 303
++R S + + ++ E++++A +I+R + + + + +AK++L LPD
Sbjct: 249 SSER--EELLSIVTNPSMTREDVERALVIVRASDGIEYARAKVREFLTEAKEALPAALPD 306
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ + + D+ +R +
Sbjct: 307 -KVRDTFCKAADYIAKRES 324
>gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium amycolatum SK46]
gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium amycolatum SK46]
Length = 351
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YR 60
+ LE + M K L++ + + + + V +L +GGKR RPM T+ A E
Sbjct: 30 EALEATITEGMRKSEDLLITELGRGEDFLAERVSHLAQAGGKRFRPMFTMLAAQFGETPE 89
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A +E H ATL HDDV+D++ RRG +A W N ++L GD+L + A +
Sbjct: 90 SDKVITAATVLELTHLATLYHDDVMDEADKRRGVPSANSRWDNTVAILAGDYLFAVASRL 149
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEV 179
+ E S+ + L+ + VI KT VL ++A +
Sbjct: 150 LAELGSESVAHFAETFGVLVTGQMRECLNDLDLPIEERIERYLKVIAEKTGVLIASAGYL 209
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ AG + AL+ YG +GI FQ+VDD++D ++ GK G D R G TLPV+
Sbjct: 210 GAYHAGASADISNALRRYGELIGIVFQIVDDIIDISSNTDQSGKTPGTDLREGVFTLPVL 269
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q T + + + +A ++ + + + ++ +
Sbjct: 270 YALQEDTPAADRLREILVG-PVSDDVLVDEALELLAQTNGVARAMEKVNELLDESDRVIA 328
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LPD + K++L V + ++R+
Sbjct: 329 DLPDCAAKEALRHVARYTVERV 350
>gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4]
gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
Length = 330
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 14 LLTPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGEHTSQ 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 74 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 133
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 134 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 194 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 253
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ P
Sbjct: 254 RGTPEQSTLAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPP 311
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+E+ + R +
Sbjct: 312 SIFKESLLELCFYSTSRQS 330
>gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
Length = 340
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 88/323 (27%), Positives = 143/323 (44%), Gaps = 4/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE +E+V + S+ + ++++ +GGKR RP+L L A
Sbjct: 18 EALESRVRAGLERVEQALRDSTQSEAPFVTQAAQHVMVAGGKRFRPLLVLLAAEFGPRPT 77
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A +E H ATL HDDV+D++ALRRG A W N ++L GD+L ++A +
Sbjct: 78 ATEVVDAAVVVELTHVATLHHDDVMDEAALRRGSSTANAAWDNSVAILAGDWLFAKASDL 137
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + L EG++R+ YL V+ KT L + +
Sbjct: 138 VASLGPEAVRIQARTFGR-LVEGQIRETLGVGEGQDPLAHYLSVVADKTGSLIATSALFG 196
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG V++AL+++G +G AFQL DD+LD E + GK G D R G PTLPV++
Sbjct: 197 ARFAGAPAEVQEALRAFGEEIGTAFQLADDILDVTSESGQSGKTPGTDLREGVPTLPVLI 256
Query: 241 AFQRGTKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + ++ L + +R + +L E A+ L
Sbjct: 257 FRAQADPAKPEDARLLELLDSDLTDDARLAETLAALRVHPSLQQAEEDVRRRADDARKLL 316
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LP+ + +L + D + R
Sbjct: 317 TDLPEGIARSALESLCDLVVTRS 339
>gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
Length = 326
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 175/301 (58%), Gaps = 3/301 (0%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
+ + + ++I + +I SGGKRLRP + LA A EY + LA ++E IHTAT++
Sbjct: 27 RAVSTKRKLIEKPLMNMISSGGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATII 86
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDD+VDDS +RRG ++ + G +V GD++ + F ++ + LE +S +
Sbjct: 87 HDDIVDDSPIRRGVLSIQSQLGKDVAVYAGDYIFCKVFEILAASTYSNILEQVSKAMSQI 146
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
EGEL+Q + D+T +DYL+ I+ KTA+LF+ + ++ + ++ + + +AL SYG+N
Sbjct: 147 CEGELKQREDLFDTDLTFKDYLYRIQKKTAILFALSAQMGADVSKAPDKIIKALYSYGIN 206
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ++DD+LD+ G+ ++GK G D R G TLPVI A + R + + +
Sbjct: 207 IGMAFQIIDDLLDFTGDYKKLGKPTGSDIREGIITLPVIYALKHSDDR--ERLQEILKNK 264
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + + A I++++ L TE+ A Y QKAK S+ LP++ KK L + + + R
Sbjct: 265 NTNEDEMSIAVEIIQKSGGLKYTEHMAERYVQKAKRSIVILPNTPMKKLLEDAPE-VIAR 323
Query: 321 L 321
Sbjct: 324 K 324
>gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Nocardioidaceae bacterium Broad-1]
gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Nocardioidaceae bacterium Broad-1]
Length = 337
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 144/321 (44%), Gaps = 7/321 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
LE + V + S + + +L+ +GGKR RP+L L A
Sbjct: 21 ELEQRLRARLAIVEEKLAGYARSSSPFVTEAASHLLEAGGKRFRPLLVLLAAE-CGPDTL 79
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + AC +E H A+L HDDV+D++ LRRG+ A + N ++L GDFL +++ +
Sbjct: 80 ADEVITAACIVELTHQASLYHDDVMDEALLRRGEDTANARFDNHVAILTGDFLFARSSSL 139
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + L EG++ + + +L V+ KT VL + +
Sbjct: 140 TAELGPDAVRIQAAT-FAKLVEGQILEGVAPAEGVDPVDHHLEVLAGKTGVLIATSALYG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG ++ AL +YG +G+AFQL DD+LD + + GK G D R G PTLPV+
Sbjct: 199 ALFAGADKEIQDALVAYGDIVGVAFQLSDDILDIASDES--GKTPGTDLREGVPTLPVLF 256
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + D L + ++R + AL + + ++AK +L
Sbjct: 257 VRRSNEPGDARLLELLDGD-LTDDAALAECVALLRAHPALAEARAYVQARAEEAKAALAP 315
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ +K+L D R
Sbjct: 316 LPEGPVRKALEAFADIVAVRS 336
>gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum]
Length = 415
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ + + + ++V + +Y G GKR RP + L A L +
Sbjct: 79 SLVADELSLLTNRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATALNVQIPR 138
Query: 64 -----------------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 139 SAPQVDVDSFSGDLRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLA 198
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ S + + E Y+
Sbjct: 199 VLAGDFLLSRACVALASLKNTEVVCLLATVVEHLVTGETMQMTTSSDERCSMEYYMQKTY 258
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 259 YKTASLISNSCKAIALLAGHSAEVSVLAFDYGKNLGLAFQLIDDVLDFTGTSATLGKGSL 318
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E ++ ++ G N++ A + ++R + T
Sbjct: 319 SDIRHGIVTAPILYAM-----EEFPQLRTLVDRGFDDPVNVEIALDYLGKSRGIQRTREL 373
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + A ++ LP+S +++L+E+ + R
Sbjct: 374 ARKHASLASAAIDSLPESDDEEVQRSRRALVELTHRVITRT 414
>gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5]
gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanococcus maripaludis C5]
Length = 317
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 155/314 (49%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + K + D + + K+L+ +GGKR+RP L++ T L+ + + A ++
Sbjct: 8 LSKIDSELKKYMEKDTK-LYGASKHLLLAGGKRVRPYLSIITYLLKKDDITEILAPALSV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRG ++G ++L GD L ++AF + + +
Sbjct: 67 ELIHNYTLVHDDIMDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSNIEDSKKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ V + T ++Y +I KT L A +E+ +++A
Sbjct: 127 EVLKVLSKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTGALIVAPVEIGAVMANCTP 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+AL +Y +G+ FQ+ DDVLD G+ +GK +G D GK T+ VI A + ++
Sbjct: 187 EERKALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIYAMENLSED 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + + + +A I+ ++ + ++AKD L+ D+ +K
Sbjct: 247 KKERLLQILGNKDATADEVSEAIAIL--ADSIEYAKNTMKKATEEAKDYLKIF-DAEKRK 303
Query: 309 SLMEVVDFCLQRLN 322
+L + DF ++R++
Sbjct: 304 NLESIADFIIERIH 317
>gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
Length = 359
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 131/299 (43%), Positives = 184/299 (61%), Gaps = 2/299 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L L Y G +
Sbjct: 45 ALITDDMREVDHVIAQRLTTTVPLIAQISQYIIAAGGKRLRPALLLMVCNALGYEGRDRH 104
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+LA +E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S++F M++E
Sbjct: 105 VLAAVVELIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHSRSFQMMVEVG 164
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L+ LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++ +++A
Sbjct: 165 SMRVLKILSDATNVIAEGEVQQLINTHDASLDEAGYLHVIRSKTAQLFEASAQLGAVLAD 224
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRG
Sbjct: 225 APREIEQACAIYGQALGTAFQIIDDVLDYTGDTQEMGKNLGDDLREGKCTLPLIAAMQRG 284
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
T + ++ I G S E L I+R AL A++ ++A D++ LP +
Sbjct: 285 TPEQAAIVRNAIEQG--STEQLSAVVDIVRSTGALDVAREAAHAEARRAIDAINVLPSN 341
>gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
Length = 322
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 162/320 (50%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L + I + +I V +++ +GGKRLRP+L + TA YR
Sbjct: 1 MEALHTYFGLHRPAIEDHIQSVLGELDPLIVPVASHVLGAGGKRLRPILCVLTAEAFGYR 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
LA A+E +H+ATL+HDD++D +ALRRG+ +A L +G Q +VL GD LL+ A
Sbjct: 61 DKEVYPLATALELLHSATLIHDDILDGAALRRGQPSAHLAFGVQETVLAGDALLAMANKC 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E + S A GE+ +++ + ++EEDY +I KTAVL A+ E
Sbjct: 121 IAGYGQPELMRIASEAIMATANGEIMEIAQLREPRLSEEDYFQIITGKTAVLIQASCECG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + RQA + G NLGIAFQLVDD LDY V + GK IG D R GK TLP++
Sbjct: 181 AVLAGAKGPQRQAAQDLGRNLGIAFQLVDDALDYTSAVEDSGKPIGGDLREGKLTLPLLF 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E + I G + + + T A Y ++A+ +L+
Sbjct: 241 YLKSLPQEEAERVLAAIKHGTLDEVEQSAIITAIGQAHLAEATREVAAGYLEQARKALQF 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P + L ++++ R
Sbjct: 301 FPAGPCQTLLGSILEYVQYR 320
>gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 357
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 8/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V +L+ + ++ +YL+ +GGKR+RPML L A + E V
Sbjct: 37 IDDGLALVEEQLLREVRFADDVADVTTRYLLAAGGKRVRPMLALLIAQLGEGNTQQVVDA 96
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE H A+L HDDV+D++ +RRG +A+ VWGN ++L GD L ++A +V + +
Sbjct: 97 AVAIEITHLASLYHDDVMDEADMRRGVPSAQAVWGNSVAILAGDLLFARASKIVADLGPR 156
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L G+L + ++ E YL V+ KT L + A ++ + +G
Sbjct: 157 AIRLQAATFER-LVLGQLHETIGPRDDQDPIEHYLDVLADKTGSLIACAAQMGVIYSGAD 215
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-- 245
+ A+ ++G G+AFQLVDDVLD + E GK G D R G TLP++ +
Sbjct: 216 PELESAVLAFGERTGVAFQLVDDVLDLADQPEETGKLAGTDLRAGVATLPLLYLRRLAES 275
Query: 246 -----TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + S +L A +R++ T A+ + +A D+L
Sbjct: 276 DAAAASLLARIQRDVAHEETPESEADLTAAIAELRDHEVTARTIAEAHRWAAEAVDALAP 335
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ KK+L D ++R
Sbjct: 336 LPEGPVKKALTRFADTIVERT 356
>gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_22]
gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22]
gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_22]
gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
XB1A]
gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22]
Length = 324
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ L + S ++ VV ++ GK +RP+L L A +
Sbjct: 4 ISLIRTPIEAELRDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGAV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ +
Sbjct: 64 CPSTLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIFNNKVAVLTGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T S ++ +S + LA+GEL QLS N +EE Y VI+ KTA LF+A + +
Sbjct: 124 AELTNSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ GV + + G +GI FQ+ DD+ DY + E+GK G D GK TLP +
Sbjct: 184 AFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF-DNREIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + +G +++ + ++EN + Y QKA D L
Sbjct: 243 VLNTTKNDEAQELAIKVKEGAATLDEIAHLISFIKENGGIEYAVQTMNIYKQKAFDLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LP+S +L +D+ + R
Sbjct: 303 LPESDICVALRAYLDYVVDR 322
>gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
Length = 335
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + + ++ + V +L +GGKR RP+ T+ +A + E
Sbjct: 17 QFAQDVRDGVARIEALMSEELGRADALMSEAVNHLFQAGGKRFRPLFTVLSAQLGPEPDA 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +
Sbjct: 77 WQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLT 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ + + + + YL V+ KTA L SA+ +
Sbjct: 137 SRLGPEAVRIIADT-FALLVTGQMRETRGAADQVDSVDHYLKVVYEKTACLISASGRFGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A
Sbjct: 196 TFSGSDEAQIERLAKLGGIVGTAFQISDDIIDIDSDADESGKVPGTDLREGVHTLPVLYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++ +A ++R ++ + + Y Q+A+ L L
Sbjct: 256 LRETGPDADRLRELLAG-PVTDDADVAEALRLLRGSQGIRKAKETVIGYAQEAQRELDQL 314
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VD+ + R
Sbjct: 315 PDVPGRQALASLVDYTVNR 333
>gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 329
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + + ++ + V +L +GGKR RP+ T+ +A + E
Sbjct: 11 QFAQDVRDGVARIEALMSEELGRADALMSEAVNHLFQAGGKRFRPLFTVLSAQLGPEPDA 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG +A WGN ++L GD+L + A +
Sbjct: 71 WQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLT 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ + + + + YL V+ KTA L SA+ +
Sbjct: 131 SRLGPEAVRIIADT-FALLVTGQMRETRGAADQVDSVDHYLKVVYEKTACLISASGRFGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A
Sbjct: 190 TFSGSDEAQIERLAKLGGIVGTAFQISDDIIDIDSDADESGKVPGTDLREGVHTLPVLYA 249
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++ +A ++R ++ + + Y Q+A+ L L
Sbjct: 250 LRETGPDADRLRELLAG-PVTDDADVAEALRLLRGSQGIRKAKETVIGYAQEAQRELDQL 308
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VD+ + R
Sbjct: 309 PDVPGRQALASLVDYTVNR 327
>gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
43183]
gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
43183]
Length = 324
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 165/320 (51%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ ++E + S ++ V+ ++ GK +RP+L L A +
Sbjct: 4 ISLIKSPISAELEDFKKHFDSCLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLYNEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +HTA+L+HDDVVD+S RRG+++ V+ N+ +VL GD+LL+ A
Sbjct: 64 CPATLHAAVALELLHTASLVHDDVVDESTERRGQLSVNAVFNNKVAVLTGDYLLATALVE 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T++ ++ +S + LAEGEL QLS N + +E+ Y VI+ KTAVLF+A ++
Sbjct: 124 VGMTRNYGIIDIVSKLGQDLAEGELLQLSNVSNPEYSEDIYFDVIRKKTAVLFAACMKAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G + + + +G +G+ FQ+ DD+ DY E+GK G D GK TLP +
Sbjct: 184 ALSVGAGDEKAEYARLFGEYIGLCFQIKDDIFDYYES-KEIGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + + G + + + + + N + + +KA L
Sbjct: 243 ALNSTRDKQAQEIAAKVKSGTATTDEIARLIEFSKANGGIEYATKVMIEFKEKALSLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ D+ KK+L+ +D+ ++R
Sbjct: 303 MEDTDVKKALVCYLDYVVER 322
>gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis]
Length = 426
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 13/325 (4%)
Query: 5 EDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D++ V I + + + E + + Y GK LRPM+ + A + Y D
Sbjct: 106 YQLLEDDLKNVYEDIRRELVANTSHEELRTIATYYFGGQGKALRPMVAILMARAINYDKD 165
Query: 63 N------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E IH A+L+HDDVVD S RRGK + +W + + GDF+L+
Sbjct: 166 QSGLLASQRQVAMISEMIHNASLVHDDVVDQSDFRRGKPSVNALWSQKKVTMAGDFILAV 225
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ ++ + LS V L +GE QL + + YL KTA L + +
Sbjct: 226 ASMMIARLQNDDVTLTLSQVITDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANS 285
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + + YG N+G+AFQLVDD+LD+ + MGK D + G T
Sbjct: 286 AKAVAMLGGADERLAELAFQYGRNIGLAFQLVDDLLDFVSSSDAMGKPTAADLKLGLATA 345
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A +R + +++KAF ++ +++ L T + A + +A
Sbjct: 346 PVLFACERFPELNPMIM-----RRFQEPGDVEKAFELVHKSQGLEQTRFLAKKHCVEAVR 400
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++KSLM V D + R+
Sbjct: 401 LAQTLAESPYQKSLMVVSDLVINRI 425
>gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
Length = 324
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ ++ K+ E+ L + S ++ +V+ Y+ GK +RP+L L A +
Sbjct: 4 LQQIKLPIDKEFEEFRRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFGEI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ + A ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ +
Sbjct: 64 NDSTLHAALSLELLHTASLVHDDVVDESDKRRGQSSVNAIYNNKVSVLVGDYMLATSLKH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T+ ++ ++ + L+EGE+ QL+ + +EE Y VI+ KTA LF+A+ E
Sbjct: 124 SAMTREITIVDLVACLGQNLSEGEIIQLANINASEFSEEVYYDVIRKKTAALFTASAEAG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ + + + + +G +GIAFQ+ DD+ D +E+GK G D R GK TLP +
Sbjct: 184 AISVHASDEMVKNARLFGEMIGIAFQIKDDIFD-YYSSDEIGKPTGNDMREGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E I S E++ + + + Y KA L
Sbjct: 243 VLNMFDDEEMRKLALRIRALDASDEDIARFIEYTKVKGGIEYARQAMVDYRNKA---LAL 299
Query: 301 LPDS---SWKKSLMEVVDFCLQR 320
LP S + K +L +D+ ++R
Sbjct: 300 LPQSAGQAVKDALTAYIDYVIER 322
>gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
Length = 312
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 1/310 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++E L + S ++ V+ ++ GK +RPML L A + + A A
Sbjct: 2 ELEDFKKLFDSSLSSSNLLLNSVIAHIRQKNGKMMRPMLVLLAAKLYGEICPATLHAAVA 61
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H A+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ A V T++ +
Sbjct: 62 LELLHNASLVHDDVVDESTERRGQLSVNAIFNNKVAVLSGDYLLATALVQVGLTRNHAII 121
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S + LAEGEL QLS NL +E+ Y VI+ KTAVLF+A + +L G
Sbjct: 122 DIVSCLGQDLAEGELLQLSNVSNLQFSEDIYFDVIRKKTAVLFAACTKAGALSVGADGER 181
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ + +G +G+ FQ+ DD+ DY E+GK G D GK TLPV+ A
Sbjct: 182 AEFARLFGEYIGLCFQIKDDIFDYFES-REIGKPTGNDMLEGKLTLPVLYALNSTGDETA 240
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ +G + + + + + + Y+Y +KA L +PD+ + +L
Sbjct: 241 GEIAVKVKNGDATADEIAFLIEFTKRHGGIEYASQMMYAYREKALLLLASMPDTDVRTAL 300
Query: 311 MEVVDFCLQR 320
+D+ ++R
Sbjct: 301 AAYLDYVVER 310
>gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2M]
gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2]
gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2]
gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2M]
Length = 331
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 125/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMDILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A A ++ PD
Sbjct: 255 RGTPEQAALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+ + + R +
Sbjct: 313 STYKESLLALCSYSTSRQS 331
>gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273]
gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium luteolum DSM 273]
Length = 330
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 4/312 (1%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++N + + + +Y++ GKR+RP LTL + + +N + +A A+
Sbjct: 17 KRINDALGACFSATTPATLYAPARYILEGKGKRIRPFLTLLASEAVSGNSENALKVALAV 76
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H TL+HDD++D++ LR + W ++L GD +++ A+ + +E +S
Sbjct: 77 EVLHNFTLMHDDIMDEAELRHNRPTVHREWNANVAILSGDMMIAYAYELALEAESHRHCE 136
Query: 131 --EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L+ T+ EG+ + L + D T DYL +I KT L SAALE + A
Sbjct: 137 LIHILNHANITICEGQALDMELEEKQDATIADYLDMISKKTGRLISAALEAGGVSADATR 196
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
Q+L +G +G AFQ+ DD LD E + GK G D NGK T ++ + + +
Sbjct: 197 EQLQSLVLFGEKIGRAFQIQDDYLDIMAEDGKSGKMAGGDVINGKKTYLLLRSLELTSGA 256
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ +S + I E + + L +T S ++A +L LP++ +
Sbjct: 257 DNELLRSIYMNKGIGKERVPDVRAVFERCGVLKETAALINSDTEEALQALENLPNAEGRD 316
Query: 309 SLMEVVDFCLQR 320
L + ++R
Sbjct: 317 YLRGFANILMKR 328
>gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 338
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + +EK L+++R+ + + I D V +L +GGKR RP++ L + + G
Sbjct: 21 ELTARVAEGLEKSEKLLMERLSTGEDFIVDKVTHLALAGGKRFRPLVALLCSEFGPHPGS 80
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN V A E +H ATL HDDV+D++ +RRG +A W N ++L GD L S A M+
Sbjct: 81 DNAVKGAVITELVHLATLYHDDVMDEADMRRGVESANARWNNTVAILAGDILFSHASLMM 140
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E ++ + S+ + YL VI+ KTAVL ++A + S
Sbjct: 141 SEIDTETVRHFADTFG--QLVTGQMRESVGARGGDPVQHYLTVIREKTAVLIASAAHLGS 198
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG V ++ G +G+ FQ+VDD++D + + GK G D R G TLPV+ A
Sbjct: 199 LHAGASADVVTRCETIGEAIGMIFQIVDDIIDIFSDSEQSGKTPGTDLREGVFTLPVLYA 258
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + E++ A ++ + +A T Y + L L
Sbjct: 259 LEDPSPAGERLRGMLTGPLERD-EDVAYAIELIGQTQARQKTLDTVRHYLSIVDEQLAEL 317
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD + ++L ++ ++R+
Sbjct: 318 PDIAANRALRDLSQSTVERV 337
>gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
Length = 324
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 1/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ ++E L + S ++ V+ ++ GK +RPML L A +
Sbjct: 7 IKAPISVELEDFKKLFDSSLSSSNLLLNSVIAHIRQKNGKMMRPMLVLLAAKLYGEVCPA 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A A+E +H A+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ + V
Sbjct: 67 TLHAAVALELLHNASLVHDDVVDESTERRGQLSVNAIFNNKVAVLSGDYLLATSLVQVGL 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T++ ++ +S + LAEGEL QLS NL +E+ Y VI+ KTAVLF+A + +L
Sbjct: 127 TRNHAIIDIVSCLGQDLAEGELLQLSNVSNLQFSEDVYFDVIRKKTAVLFAACTKAGALS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + + + +G +G+ FQ+ DD+ DY E+GK G D GK TLPV+ A
Sbjct: 187 VGADDEKVEFARLFGEYIGLCFQIKDDIFDYFES-KEIGKPTGNDMMEGKLTLPVLYALN 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I +G+ S + + + N + +++ +KA L +PD
Sbjct: 246 STADKAAEKIALKIKNGEASSDEIAHLIEFTKLNGGIEYANETMFAFREKALSLLASIPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
S K +L +D+ ++R
Sbjct: 306 SDVKTALAVYLDYVVER 322
>gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
Length = 349
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 91/341 (26%), Positives = 166/341 (48%), Gaps = 24/341 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+ + + + E+VN I + + E + + +YL+ +GGKRLRP + L A L
Sbjct: 9 EAVLEAVRERRERVNEAIPEELPIQRPERLYEASRYLLDAGGKRLRPTVLLTVAESLLDV 68
Query: 58 -------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ + A ++E I + TL+HDD++DD LRRG A + +
Sbjct: 69 EPLSTDYREFPTLNGNRIDIMDAAVSVEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDLE 128
Query: 105 TSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
T++L GD L S+AF ++ +S EAL L+ + EG+ ++ + DV+ E
Sbjct: 129 TAILAGDTLYSKAFEIMLETGAKPDRSVEALNVLATTCTKICEGQSLDVTFEERADVSPE 188
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+YL +++ KTAVL++A+ + +++ G AL YG+++G AFQ+ DDVLD
Sbjct: 189 EYLEMVEQKTAVLYAASACLPAILLGADEETIDALYGYGLDIGRAFQIQDDVLDLTVPSE 248
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
++GK G D K TL + A +G + + + ++ + A ++ +
Sbjct: 249 QLGKQRGSDLVENKQTLITVHARDQGVDVDNLVDTNDVEA--VTEAEIDDAVAELQAAGS 306
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A + K+ L LPD+ ++ L ++ D+ ++R
Sbjct: 307 IEYANTTAQDLVAQGKERLEVLPDNEARELLRDIADYLIER 347
>gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD1]
gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD1]
Length = 331
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 126/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A A ++ PD
Sbjct: 255 RGTPEQAALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S++K+SL+ + + R +
Sbjct: 313 STYKESLLALCSYSTSRQS 331
>gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 325
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 8/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V +L+ + ++ +YL+ +GGKR+RPML L A + E V
Sbjct: 5 IDDGLALVEEQLLREVRFADDVADVTTRYLLDAGGKRVRPMLALLIAQLGEGNTQQVVDA 64
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE H A+L HDDV+D++ +RRG +A+ VWGN ++L GD L ++A +V + +
Sbjct: 65 AVAIEITHLASLYHDDVMDEADMRRGVPSAQAVWGNSVAILAGDLLFARASKIVADLGPR 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L G+L + + E YL V+ KT L + A ++ + +G
Sbjct: 125 AIRLQAATFER-LVLGQLHETIGPREGQDPIEHYLDVLADKTGSLIACAAQMGVIYSGAD 183
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ A+ ++G G+AFQLVDDVLD + E GK G D R G TLP++ +
Sbjct: 184 PELESAVLAFGERTGVAFQLVDDVLDLADQPEETGKLAGTDLRAGVATLPLLYLRRLAET 243
Query: 248 R-------EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + S +L A +R++ T A+ + +A ++L
Sbjct: 244 DAAAAALLARIQRDVEHEETPESEADLTAAIAELRDHEVTARTIAEAHRWAAEAVEALAP 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP KK+L D ++R
Sbjct: 304 LPQGPVKKALTRFADTIVERT 324
>gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
Length = 331
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 126/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 SGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQAALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECARQEAQAAAAAIATFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLGLCSYSTSRQS 331
>gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
Length = 406
Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 100/327 (30%), Positives = 171/327 (52%), Gaps = 11/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----- 55
+ L ++ D+ +N + + ++ ++ + + +GGKRLRP L +
Sbjct: 84 VSSLLEVVSDDLLNLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 143
Query: 56 -MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 144 AALSELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 203
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +
Sbjct: 204 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLIA 263
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ +G+ ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G
Sbjct: 264 ASTRSAAIFSGMDTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 323
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PVI A +++ + I+ +L A ++ + + + A G A
Sbjct: 324 TAPVIFAL-----QDEPRLREIIDSEFSEPGSLAAAVELVHRSGGIRRAQELAEEKGALA 378
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
SL+CLP S ++ +L VV + LQR+
Sbjct: 379 IQSLQCLPRSEFRSALERVVHYNLQRI 405
>gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
Length = 575
Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + L L + + + S VE I + + L+ +GGKR RP +T A L
Sbjct: 252 MTGVAALILPG-AAFEARLREVLRSRVEFIELIGEDLVAAGGKRARPTVTFLAAQALGLD 310
Query: 61 GDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
G + LA IE +H+A+LLHDD++DD+ RRG+ AA +GN SV+ GDF+L+
Sbjct: 311 GQDPRWQTVTDLAVCIELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLA 370
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++ AL + Q ++ + YL +I KTA L
Sbjct: 371 RLLTLLAAMPQGPALTRAFGQTASQICEGEVLQFQVAAYAEYGLAPYLDIIHGKTAALIE 430
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A +L+ + R AL ++G G+AFQ+ DD+LD G+ +GK +G D R GK
Sbjct: 431 LAAFSPALLLNAPEAQRAALATFGREYGLAFQIQDDLLDLMGDEAILGKPVGGDLREGKA 490
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TLPV+ + ++ + + ++++ + R A+ T ++A
Sbjct: 491 TLPVLHL---LDGPQHAEVRAVLERRAANPGDVERIRELARTQGAVERTREEIGRRARRA 547
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++L LP S + +L + L+R +
Sbjct: 548 LEALELLPPSEARAALAALPQRELERTH 575
>gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
Length = 274
Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 112/274 (40%), Positives = 161/274 (58%), Gaps = 1/274 (0%)
Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
ML + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SV
Sbjct: 1 MLAVLSAKALGYQGAHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASV 60
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
LVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE Y+ VI S
Sbjct: 61 LVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYS 120
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+
Sbjct: 121 KTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGD 180
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GKPTLP++ A Q G + + I + L + M + +L T +A
Sbjct: 181 DLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKA 239
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
KA L LP+S +K++L+ + + R
Sbjct: 240 QYEADKAIAELAVLPESEYKQALITLAHMAVNRS 273
>gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348]
gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Metallosphaera sedula DSM 5348]
Length = 327
Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 159/327 (48%), Gaps = 12/327 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ + + KVN + + D + + +YLI +GGKRLRP++ + ++ +L
Sbjct: 2 DLDQYFEEIVAKVNATMDSFLHGDTRELYEASRYLISAGGKRLRPLVVVLSSDLLGGERH 61
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+L A+E +H TL+HDD++D RRG + WG T++L GD L ++AF ++
Sbjct: 62 RAILAGAAVEVLHNFTLIHDDIMDQDTTRRGIPTVHVKWGIPTAILAGDLLHAKAFQILT 121
Query: 123 E-------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
E + + L+ S ++EG+ + K D+ E+DYL +I+ KTA LF+
Sbjct: 122 ESIKGLSGDVAYKVLDCFSRSVIVVSEGQAMDMEFEKRWDIREKDYLEMIRRKTAQLFAC 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + ++AG L +G +GIAFQ+VDD+L + E+GK + D R K T
Sbjct: 182 SAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITADEKELGKPLYSDIREAKKT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L VI + +R E+ + +S LK ++ +L A Y ++A
Sbjct: 242 LLVIKSLERANSEERKIIMEGLGSNDMSK--LKATASLITGL-SLDYAYELARKYHEEAL 298
Query: 296 DSLRCL-PDSS-WKKSLMEVVDFCLQR 320
L + P + K L + D ++R
Sbjct: 299 AHLSRVTPRNENAVKGLRSIADIVIKR 325
>gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
Length = 416
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 92/341 (26%), Positives = 153/341 (44%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYR--- 60
L ++ V + + ++V + +Y G GKR RP + L A +
Sbjct: 80 SLVADELSMVANRLRSMVVTEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAMNISILE 139
Query: 61 --------------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 140 PSLRGPGDALTTELRARQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLA 199
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ + + E Y+
Sbjct: 200 VLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMTTTCEQRCSMEYYMQKTY 259
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+ G + V YG NLG+A+QL+DDVLD+ G +GK
Sbjct: 260 YKTASLISNSCKAIALLGGQTSEVAMLAYEYGKNLGLAYQLIDDVLDFTGTSASLGKGSL 319
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ G N+ A + ++R +
Sbjct: 320 SDIRHGIITAPILFAM-----EEFPQLREVVDRGFDDPANVDVALDYLGKSRGIQRAREL 374
Query: 287 AYSYGQKAKDSLRCLPDS------SWKKSLMEVVDFCLQRL 321
A + A +++ LP+S +++L+++ + + R
Sbjct: 375 AKKHANIAAEAIDSLPESNDEDVRKSRRALLDLTERVITRT 415
>gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
Length = 308
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 168/309 (54%), Gaps = 6/309 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E + +L+ + V+++ + +YLI GGKRLRP++T+ + M ++ + L +
Sbjct: 4 LEAIERRLLEELNPKVKLVLETGRYLIDGGGKRLRPLITMLSCGMCGGEPEDALPLGVGL 63
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E+IH A+LLHDDVVD + RRG+ +A L++GN+ +VL GD++ ++A + + + +
Sbjct: 64 EYIHAASLLHDDVVDGAKKRRGRESANLIFGNEVAVLTGDYMYAKALHLFATHGTIDMIR 123
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S +AE ++ +LS +TEE+Y +I KTAVLF A + V L
Sbjct: 124 IVSRAVMDMAEAQVLELSRVG-ELITEEEYFQIIDGKTAVLFGACVSVGGL--AGGCDEE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L G+ +G AFQL+DD+LDY G + GK +G D R GK T P++ ++
Sbjct: 181 GRLYEVGLRMGRAFQLIDDLLDYAGNSEKTGKPVGNDLREGKTTYPLLSV---LDSLDRV 237
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+S + + S E ++ + V T+ RA +AK+ L P++ +K+ ++
Sbjct: 238 RVESLLKEINPSAEEIESLRREVLSLGGDVKTKERAVEELSRAKELLSVFPENQYKEEIL 297
Query: 312 EVVDFCLQR 320
+++DF R
Sbjct: 298 KLMDFVAFR 306
>gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1]
gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
Length = 326
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 9/326 (2%)
Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MK + +E+VN + + + S+ + + KY I +GGKR RP+LT+
Sbjct: 1 MKSFYEWELALHSKIEEVNERLFEVVKSEEPDLDRMAKYTIEAGGKRFRPLLTILAFESS 60
Query: 58 EYRGD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA E IHTA+L+HDD++DDS +RRG+ G +++V D+L ++
Sbjct: 61 TDDPYFKILDLAAGYELIHTASLIHDDIIDDSPMRRGRPTLSYKEGINNAIVVADYLFAK 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A+ + + + LAEG++ + NLD+TE+ Y +I++KTA F A
Sbjct: 121 AYELGSRYGPLVSKVMADASSR-LAEGQILEAVNLGNLDITEDTYYKIIENKTAHFFEAC 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++++A R+ L ++ NLG+AFQ+ DD+LD G+ GK D ++ TL
Sbjct: 180 ALGATIVAEADRPTREILSNFAFNLGMAFQVTDDILDIVGDDRYTGKPTFVDIKHDALTL 239
Query: 237 PVILAFQRGTKREKN-FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P+I A + ++ +I+ LK I ++ ++ + A Y K+
Sbjct: 240 PIIYALRNSNDNDRRAIIDMINGRREINKSLLK---DIFLKSGSIDYSFSVAKQYITKSM 296
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
D L+ S LME+ + R+
Sbjct: 297 DYLKKAKKSPDIDLLMELAFIVIDRI 322
>gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 325
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + S +++ +++ +L +GGKR RP+ T+ +A + +
Sbjct: 7 AFAATVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFRPLFTVLSAQIGPDPDA 66
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V
Sbjct: 67 AEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV 126
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ K E YL V+ KTA L +AA +
Sbjct: 127 SRLGPEAVQLIAET-FAQLVTGQMRETRGRKEGSDPIEHYLKVVYEKTACLIAAAGRFGA 185
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A
Sbjct: 186 MFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYA 245
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + E + +A ++R + + + Y +A L L
Sbjct: 246 LREPGPDAARLRELLVG-PIDDDEVVAEALTLLRASPGMAKAKQSLREYAAQAHRELDQL 304
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VDF + R
Sbjct: 305 PDVPGRRALQTLVDFTISR 323
>gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291]
Length = 335
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + S +++ +++ +L +GGKR RP+ T+ +A + +
Sbjct: 17 AFAATVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFRPLFTVLSAQIGPDPDA 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V
Sbjct: 77 AEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ K E YL V+ KTA L +AA +
Sbjct: 137 SRLGPEAVQLIAET-FAQLVTGQMRETRGRKEGSDPIEHYLKVVYEKTACLIAAAGRFGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A
Sbjct: 196 MFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + E + +A ++R + + + Y +A L L
Sbjct: 256 LREPGPDAARLRELLVG-PIDDDEVVAEALTLLRASPGMAKAKQSLREYAAQAHRELDQL 314
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VDF + R
Sbjct: 315 PDVPGRRALQTLVDFTISR 333
>gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49]
Length = 331
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAIAAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLGLCSYSTSRQS 331
>gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
Length = 329
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + + ++ + V++L +GGKR RP+ T+ +A + E
Sbjct: 11 EFAQDVRDGVARIEALMSEELGKADVLMAEAVQHLFQAGGKRFRPLFTVLSAQLGPEPDA 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG +A W N ++L GD+L + A +V
Sbjct: 71 WQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWSNNIAILAGDYLFATASRLV 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L G++R+ + + + YL V+ KTA L +A+ +
Sbjct: 131 SRLGPDAVRIIADT-FALLVTGQMRETRGAADHVDEVDHYLKVVYEKTACLIAASGRFGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G + + L G +G AFQ+ DD++D + +E GK G D R G TLPV+ A
Sbjct: 190 TFSGADDEQIERLARLGGIVGTAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYA 249
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + +L +A ++R + + + +Y ++A+ L L
Sbjct: 250 LRETGPD-ADRLRELLATPVTDDGDLAEALRLLRASDGITKAKETVAAYAREAEQELGQL 308
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P +++L +V + + R
Sbjct: 309 PAGPGRQALATLVQYTINR 327
>gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 331
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLALCSYSTSRQS 331
>gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
Length = 317
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++K++ + + D + + + K+L+F+GGKR+RP L + T ++ + + + A A+
Sbjct: 8 LQKIDEELKTYVDKDDK-LYNASKHLLFAGGKRIRPYLAVVTYMLKKDDIEEVLPAAAAV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D RRGK +V+G ++L GD L ++AF V + K +
Sbjct: 67 ELIHNYTLIHDDIMDHDDERRGKPTVHVVFGEPMAILAGDLLYAKAFEAVSKIKDNKKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + +N T ++YL +I+ KT L A++E+ +++A
Sbjct: 127 EVLKILSKACVEVCEGQAMDMEFENYYPTMDEYLEMIRKKTGALLEASVEIGAVMADCNE 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R ALK Y +G+ FQ+ DDVLD G+ ++GK +G D R GK T+ VI A + +
Sbjct: 187 EERNALKEYAKRIGLTFQIQDDVLDLIGDEKKLGKPVGSDIREGKKTIIVIHALKTLDED 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + I E +K+A I++ ++ + ++AK+ L+ D +K
Sbjct: 247 KKKRLLNILGNKDIKDEEIKEAIEILK--PSIEYAKELMKQKTEEAKEYLKIF-DKDRRK 303
Query: 309 SLMEVVDFCLQRL 321
L ++ DF + R+
Sbjct: 304 VLEDLADFIISRI 316
>gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
Length = 317
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++K++ + + + + + + K+L+F+GGKR+RP LT+ T ++ + + A A+
Sbjct: 8 LQKIDEELKTYVDKNDK-LYNASKHLLFAGGKRIRPYLTVVTYMLKKDNIREVLPAAAAV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRGK +V+G ++L GD L ++AF V K +
Sbjct: 67 ELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDNKKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + +N T E+YL +I+ KT L A++E+ +++A
Sbjct: 127 EVLKILSKACVEVCEGQAMDMEFENYYPTMEEYLEMIRKKTGALLEASVEIGAVMADCNE 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+ALK Y +G+ FQ+ DDVLD G+ ++GK +G D R GK T+ VI A + +
Sbjct: 187 EEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDEE 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + I + +K+A I++ ++ + ++AK+ L+ D +K
Sbjct: 247 KKKRLLEILGNKDIGDKEIKEAIEILK--PSIEYAKELMKQKTEEAKEYLKIF-DKDRRK 303
Query: 309 SLMEVVDFCLQRL 321
L ++ DF + R+
Sbjct: 304 VLEDLADFIMSRV 316
>gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified
eubacterium SCB49]
gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified
eubacterium SCB49]
Length = 324
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E ++ + + I + + + Y++ GGKRLRP+LTL TA + + A A+
Sbjct: 9 EALSKGLEQAIPVNEPIGLYGPAAYILELGGKRLRPVLTLMTAEFFGSTIEKAMNAALAV 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H +L+HDD++DD+ LRRGKV W T +L GD +L A+ + ++++ +
Sbjct: 69 ELFHNFSLIHDDIMDDAPLRRGKVTVHEKWDLNTGILSGDAMLILAYQLFEGYEAEKFQQ 128
Query: 132 ALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L + T + EG+ + DVT +Y+ +I KTAVL AA+++ +++A +
Sbjct: 129 LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEASD 188
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + + +G NLGIAFQL DD LD G+ GK IG D K T + A +R +
Sbjct: 189 ACKDNIYEFGRNLGIAFQLQDDYLDAFGDPETFGKQIGGDIIVNKKTFLYLTALERCSPS 248
Query: 249 EKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW- 306
E+ + + E +K + A + + Y KA D L + S
Sbjct: 249 EREQLTTLFSQSPEDPSEKIKIVKDLFISTGAAEASMIKMEKYTAKANDFLEKIDFSEDK 308
Query: 307 KKSLMEVVDFCLQRL 321
K++ D+ L+R
Sbjct: 309 KEAFKSFGDWLLKRK 323
>gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 335
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + S +++ + + +L +GGKR RP+ T+ +A + +
Sbjct: 17 AFAATVRDGVGRIEQLMDTELRSADDIMTESLTHLFKAGGKRFRPLFTVLSAQIGPDPDA 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V
Sbjct: 77 AEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G++R+ K E YL V+ KTA L +AA +
Sbjct: 137 SRLGPEAVRLIAET-FAQLVTGQMRETRGRKQGSDPIEHYLKVVYEKTACLIAAAGRFGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A
Sbjct: 196 MFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + E + +A ++R + + + Y +A L L
Sbjct: 256 LREPGPDAARLRELLVG-PIDDDEVVAEALTLLRASPGMAKAKQSLREYAAQAHRELDQL 314
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VDF + R
Sbjct: 315 PDVPGRRALQTLVDFTISR 333
>gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7]
gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7]
Length = 317
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + K + D + K+L+ +GGKR+RP L++ T L+ + + + A ++
Sbjct: 8 LSKIDSELKKYMEKDTN-LYSASKHLLLAGGKRVRPYLSIITYLLKKDDINEIMAPALSV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRG ++G ++L GD L ++AF + +
Sbjct: 67 ELIHNYTLVHDDIMDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSNIGDSKKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ V + T ++Y +I KT L A +E+ +++A
Sbjct: 127 EVLKVLSKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTGALIVAPVEIGAIMAECTP 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R AL +Y +G+ FQ+ DDVLD G+ +GK +G D GK T+ +I A + ++
Sbjct: 187 EERNALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMIIYAMENLSED 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + E + +A I+ ++ + ++AK L+ D+ +K
Sbjct: 247 KKERLLQILGNNNATPEEVSEAIEIL--ADSIEYAKNTMKKATEEAKHYLKIF-DAEKRK 303
Query: 309 SLMEVVDFCLQRLN 322
+L + DF ++R++
Sbjct: 304 NLETIADFIIERIH 317
>gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032]
gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032]
Length = 338
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 8/317 (2%)
Query: 13 EKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+V + + + ++ ++V Y +F+GGKR+RP+LT+ + LA
Sbjct: 21 ARVEAAMRHDLTTALAGCDPLLGEIVHYALFNGGKRIRPLLTVLCSRCCGRDDAELYQLA 80
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
A E++H ATL+HDDV+D + RRG G ++L GD+L + + ++ +
Sbjct: 81 AAFEYLHVATLVHDDVIDRAEQRRGTPTVVARHGLTAAILAGDWLHAHSMHLIGKLAGGR 140
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
LE ++ GE QL L ++ TE+ Y VI+ KT L + + +L AG
Sbjct: 141 GLEIFCQATASMVNGEFAQLRLIGDITGTEQQYFEVIRQKTGNLIRSTCSIGALFAGADE 200
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ R AL +YG +G AFQ+VDD+LD+ G + GK IG DF GK TLP++ A +R +
Sbjct: 201 ARRTALATYGDRIGAAFQVVDDLLDFLGSAHRTGKTIGNDFIEGKLTLPLLHALERADDQ 260
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP----DS 304
+++ + + E ++ ++ A +A +L +
Sbjct: 261 DRHTLNQLLTGDRTRTEAYRQLVDLIGRYAGFDSAAQTARQLVAEAIQALAPFHASGQEG 320
Query: 305 SWKKSLMEVVDFCLQRL 321
L ++ ++ L R
Sbjct: 321 ENVALLKQLAEYILART 337
>gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
Length = 324
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++E L + S ++ VV ++ GK +RP+L L A +
Sbjct: 4 ISIIRTPIESELEAFKELYDSSLSSSNTLLDSVVAHIRQRSGKMMRPILVLLVARLYGVV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +H A+L+HDDVVD+S RRG+++ ++ N+ +VL GD+LL+ +
Sbjct: 64 SPATLHAAVSLELLHNASLVHDDVVDESTERRGQLSVNAIFNNKVAVLTGDYLLATSLVH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
T S + + +S + LA+GEL QLS N +E Y VI+ KTA LF+A +
Sbjct: 124 AELTNSHQIIRLVSSLGQDLADGELLQLSNVSNHSFSETVYFDVIRKKTAALFAACTAAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ GV + + G +GI FQ+ DD+ DY + E+GK G D GK TLPV+
Sbjct: 184 AYSVGVSEEEVKLARLLGEYIGICFQIKDDIFDYF-DSKEIGKPTGNDMLEGKLTLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A R + + +G +++ + + +EN + +Y QKA L
Sbjct: 243 ALNRANDNQATEIALKVKEGTATLDEIARLIAFTKENGGIEYAVRTMNAYKQKAFGLLAS 302
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS+ +L +D+ + R
Sbjct: 303 LPDSAICVALRSYLDYVVDR 322
>gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 298
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 4/296 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
I + ++L+ +GGKR RP+L + +A + V A +E H ATL HDDV+D+
Sbjct: 2 PFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDVMDE 61
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
+A+RRG +A W N +VL GDFL ++A ++ + + L G++ +
Sbjct: 62 AAVRRGVPSANTRWDNSVAVLTGDFLFARASQILADLGPEAVRVQALAFER-LVTGQILE 120
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ ++ + YL V+ KT L + + ++++G +V L YG LG+AFQL
Sbjct: 121 TAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQL 180
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN---DGKISV 264
DDVLD + +E GK G D R G PTLPV+ +R + +
Sbjct: 181 ADDVLDIASDSDESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDLALCELLDSDLSDD 240
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A ++R + AL Y ++A+ +L L + K +L+E+ D + R
Sbjct: 241 ARHAEALRLLRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALVELCDAVVHR 296
>gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis
carolinensis]
Length = 350
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-------E 58
L KD++ + I K + + + ++ +Y GK RPM+ + A
Sbjct: 32 KLGRKDLKNLYEDIQKELRASTTDLREMCEYYFDGKGKAFRPMIVVLMARACNFHHKSSG 91
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A E IHTA+L+HDDV+DD+ RRGK+ VWG + +VL GDF+L+ A
Sbjct: 92 EVQASQRSIALIAEMIHTASLVHDDVIDDANSRRGKLTVNHVWGERKAVLAGDFILAVAS 151
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ L GE QL +N + YL KTA L + + +
Sbjct: 152 QTLARIGNTTIVSVLTRAIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIAHSCK 211
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++A V + YG N+GIAFQL+DDVLD+ ++GK D + G T PV
Sbjct: 212 AVSILACPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTSCSEQLGKPTSADLKLGIATGPV 271
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A Q+ + + G ++++A + ++ + T Y A Y +A +
Sbjct: 272 LFACQQFPEINAMIMRRFNLPG-----DVQRAQEYVLQSGGIQQTTYLAQRYCHEAMREI 326
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L S + +L+++ + L R
Sbjct: 327 SKLRPSPERDALVQLAEIVLAR 348
>gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
Length = 331
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 128/319 (40%), Positives = 178/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G V MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTVEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SVYKESLLALCSYSTSRQS 331
>gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ + + + ++V + +Y G GKR RP + L A L
Sbjct: 86 SLVADELSLLADRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPR 145
Query: 64 -----------------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + ++ GN+ +
Sbjct: 146 PALAEVPETLSTELRTRQQCIAEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVA 205
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ + V+ E YL
Sbjct: 206 VLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTY 265
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 266 YKTASLISNSCKAIALLAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSL 325
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + + G + ++ A + ++R + T
Sbjct: 326 SDIRHGIITAPILFAI-----EEFPQLDAVVKRGLDNPADIDLALDYLGKSRGIQRTREL 380
Query: 287 AYSYGQKAKDSLRCLPDS------SWKKSLMEVVDFCLQRL 321
A + A +++ LP+S +++L+++ + R
Sbjct: 381 AMKHANLAAEAIDSLPESGDEDVLRSRRALIDLTHRVITRT 421
>gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 331
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLGLCSYSTSRQS 331
>gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus]
Length = 513
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 156/333 (46%), Gaps = 21/333 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALMLEYRGDNH 64
+L ++ ++ I I ++ ++ KY GGK++RP + + +
Sbjct: 186 ELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQV 245
Query: 65 ---------------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
+ LA E IH A+L HDDV+D++ RRG + V+GN+ ++L
Sbjct: 246 RPDVQPGTELVNPLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILA 305
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
GDFLL+++ + +S E++E +S L +GE+ Q+ +++ E Y+ KT
Sbjct: 306 GDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKT 365
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + + S+++ V++ YG +G+AFQLVDD+LD+ G +GK D
Sbjct: 366 GSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDL 425
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R G T PV+LA ++ I+ ++ +A ++ + + + A
Sbjct: 426 RQGLATAPVLLA-----AEQQPGLAKLISRKFRGPGDVDEALELVHRSDGIARAKEVAVV 480
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA ++ L DS + +L+++ + R +
Sbjct: 481 QAEKAMSAILTLHDSPAQNALVQLAHKIVNRNH 513
>gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
Length = 331
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRVGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLGLCSYSTSRQS 331
>gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
Length = 324
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
M++V+ L+ + + D I + YL+ +GGKR RP L L + + + V
Sbjct: 13 VASGMQQVDALLAEVVQHDDPFIAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPEVVKA 72
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H A+L HDDV+DD+ LRRG +A +GN TSV+VGD L ++ +V E +
Sbjct: 73 AAAVELVHLASLYHDDVMDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALVAELGPE 132
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G++R + L V+ KT L +AA + +G
Sbjct: 133 AVRLQADTFVR-LCAGQIRDERPVPAGVDPVDHLLGVLADKTGALIAAAACYGAQFSGCD 191
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + + ++G LG+ FQL DD+LD + E GK G D R GK TLPV+ A +
Sbjct: 192 AATVELMGAFGERLGLVFQLADDLLDVASDAEESGKTPGTDLREGKATLPVLFARRSTDA 251
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ G ++ E+L +A ++R + L + +Y ++ + L L D
Sbjct: 252 GSARLRELL--AGPVAEEDLSEALGMLRAHPGLQEAREFTLAYARQTESMLEPLGDGEVP 309
Query: 308 KSLMEVVDFCLQRL 321
+L ++V R+
Sbjct: 310 DALRQLVHAVADRV 323
>gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum]
Length = 446
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 92/325 (28%), Positives = 155/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
L D++ V I + + + + ++ Y GK +RPM+ + A + Y
Sbjct: 126 LLEDDLKDVYVYIRDALRRSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKE 185
Query: 64 -------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E IHTA+L+HDDV+D S RRGK + ++W ++ + GDF+L+
Sbjct: 186 KSGLLTSQREVAMISEMIHTASLVHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGDFILAV 245
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ K+ + LS V L +GE QL + + YL KTA L + +
Sbjct: 246 ASIMIARLKNNDVTLVLSQVVSDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANS 305
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ +++AG + YG NLG+AFQLVDD+LD+ MGK D + G T
Sbjct: 306 VKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVSSSAAMGKPTAADLKLGLATA 365
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++R L T+Y A + Q+A
Sbjct: 366 PVLFACEKFPELNPMIM-----RRFQEPGDVERAFDLVHKSRGLEQTQYLAKQHCQEAVR 420
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L +S ++K L+ D+ L R+
Sbjct: 421 LANLLEESPYQKGLIVAADYVLNRM 445
>gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
Length = 309
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 107/310 (34%), Positives = 154/310 (49%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M V ++ + + S E + +VV Y GGKR+RP L L A D H L I
Sbjct: 1 MAAVEEILNREMSSRYESVNEVVSYGCMLGGKRMRPALLLLAAKACGQVTDAHYTLGAVI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTATL+HDDV+D++ RR W N+TSVL+GDFL S AF + + A
Sbjct: 61 EMIHTATLVHDDVLDEADQRRHLATVNSRWNNETSVLLGDFLFSHAFYLATMLPTTCAAR 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ + EGELRQ++ + + TEE+YL +I +KTA L + A E+ + A
Sbjct: 121 MIGRSTNIVCEGELRQIASRQAFETTEEEYLAIIDAKTAELCACACELGARYAEASEEQI 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
AL+ +G +LGIAFQ+ DD+LD G E GK++G D KPTLP+I A ++
Sbjct: 181 AALEKFGRDLGIAFQIADDLLDVEGNEVETGKSLGTDLEKQKPTLPLIYALHYFQGEQRE 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + + AL RA Y Q A +L LP S + +L
Sbjct: 241 QVLAIVEGPAENRG--PGLRPWLAQCDALGYARRRANEYIQSAIAALSILPHSESRTTLE 298
Query: 312 EVVDFCLQRL 321
++ F R
Sbjct: 299 QLASFVTARS 308
>gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis]
Length = 312
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/327 (23%), Positives = 134/327 (40%), Gaps = 22/327 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
M + ++DM+ +L + M+ + +GGKRLRP++ L A
Sbjct: 1 MGQVSAPVVEDMDICRQNLLNVVGERHPMLLAAANQIFSAGGKRLRPLIVLLVARATFPL 60
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + H LA E +HTA+L+HDDV+D+ +RRGK ++G + +VL GDFL
Sbjct: 61 TGLSDITERHRRLAEISEMLHTASLVHDDVLDECDVRRGKETVNSLYGTRVAVLAGDFLF 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + + E ++ +S V A+GE+ Q + + + YL KTA L +
Sbjct: 121 AQSSWFLANLDNMEVIKLISQVIADFADGEISQAASLFDAYIDLRRYLDKSFWKTASLIA 180
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A+ +++ + R +S + + + + +
Sbjct: 181 ASCRSAAVFSDCDTEARPPNRSCSLPPRLPPPRRVALPAHLAGRCPWPPLLRRVQD---- 236
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ + I +L++A ++ + A G A
Sbjct: 237 ------------EMVGDGLLQLIQGRFKEEGSLQRALELVSLGGGIDKARTLAREQGDLA 284
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
SL CLPD+ K+SL +VD L+RL
Sbjct: 285 LASLACLPDTPAKRSLELMVDLVLERL 311
>gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
Length = 332
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/324 (25%), Positives = 157/324 (48%), Gaps = 4/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ +E + +++N + K D + +Y++ GKR+RP LTL A +
Sbjct: 7 LEQVEQKYRQYHKRINDELGKCFTKDSPRSLYGPARYILDGTGKRIRPFLTLLAAEAVCG 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+N + A A+E +H TL+HDD++D + LR G+ + W + ++L GD +++ A+
Sbjct: 67 SSENAIKTALAVEILHNFTLVHDDIMDQADLRHGRPTVHVKWDSTAAILSGDMMIAFAYE 126
Query: 120 MVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++TK+ L+ T+ EG+ + L + D T DYL +I KT L SA+
Sbjct: 127 CALQTKTARHDELVHILNDANITICEGQAIDMELEQRQDATIADYLDMIAKKTGRLISAS 186
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
LE ++ + + L +G +G AFQ+ DD LD E + GK G D NGK T
Sbjct: 187 LEAGGIVGDADSEQIEKLMLFGDKIGRAFQVQDDYLDIMAENGKSGKVPGGDVINGKKTY 246
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
++ + + T +E++ + I++ IS + + + I + L + + + A
Sbjct: 247 LLLRSLELTTGQERDMLQFVIDNKGISPDRVPEIRAIYEQCGVLDEARDLINTDTEDALS 306
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
++ LP + ++ L ++R
Sbjct: 307 AVDTLPYAEGREYLKGFALKLMKR 330
>gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 353
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 6/325 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + +V + + + S + +YL +GGKR+RPML + TA +
Sbjct: 29 RTLLSTVEAGLGRVESTLEEEVRSADRLADVTARYLYEAGGKRVRPMLAILTAQLGRGTT 88
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A A+E H +L HDDV+D + RRG +A+ VWGN ++L GD L S+A ++
Sbjct: 89 PEVIEVATALELTHLGSLYHDDVMDGADKRRGVPSAQTVWGNNIAILTGDLLFSRASQLM 148
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + A++ + L G++ + + D E YL V+ KT L +AA +
Sbjct: 149 A-RRGERAIQLQADTFERLVLGQMHETVGPQEGDEPVEFYLRVLADKTGSLIAAAAQCGV 207
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G Q + +G G+AFQL+DDV+D + +E GK G D R G PT+P +L
Sbjct: 208 IYSGAPEEFEQPMVVFGEKAGVAFQLLDDVIDLSPDASETGKVPGTDLRAGVPTMPYLLL 267
Query: 242 FQRGTKREKNFWKSTINDGKI-----SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
R + + L +R++ +T A+ + Q+A D
Sbjct: 268 GHRSDAASADLRGRIDEGQERIAAGADPAILDAPLAELRDHDTTHETLRLAHQWSQEAID 327
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L LPD + +++L R
Sbjct: 328 ALAPLPDGAVREALTRFARAVADRS 352
>gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 331
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L
Sbjct: 15 LLAPITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 75 RHVLAAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVG 134
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++
Sbjct: 135 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVL 194
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +
Sbjct: 195 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIE 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
RGT + + I G F + + AL T A Q A ++ PD
Sbjct: 255 RGTPEQSALAREAIEQGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPD 312
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S +K+SL+ + + R +
Sbjct: 313 SIYKESLLGLCSYSTSRQS 331
>gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
Length = 315
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 171/318 (53%), Gaps = 4/318 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ DL +D+ + + + S VE I + + L+ +GGKRLRP L T +L +
Sbjct: 1 MFDLIQQDLSDFEARLTEELYSPVEFIGAIGEDLVHAGGKRLRPSLAFLTGRLLGAEREA 60
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ +A A+E +H+A+LLHDD++DD++ RRG VAA +GN SV+ GDF+L++ ++ E
Sbjct: 61 AMRVALAVELLHSASLLHDDLIDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVLGILAE 120
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ +S A + EGE+ Q ++ + E Y +I+ KTAVL +AA E +L+
Sbjct: 121 ADAPSFTRLMSETAARICEGEVLQFQMASLETYSLEHYNTIIEGKTAVLLAAATEGVALL 180
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG R+AL+++G++ G AFQ+ DD+LD + +GK IG D R GK T V+ +
Sbjct: 181 AGAAPGARRALRAFGLHYGRAFQMRDDLLDLMSDPETLGKPIGGDLREGKATFAVLTLLE 240
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G + ++ + ++++ ++R + A + Q A +L +
Sbjct: 241 AGVEE----ARTILRRHASEPGDVERMLELVRAHGAEARAAAQIALEAQAAMRALEPFEE 296
Query: 304 SSWKKSLMEVVDFCLQRL 321
K++L+ + + L+R+
Sbjct: 297 GPAKRALVSLAERELERV 314
>gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
CBDB1]
gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
CBDB1]
Length = 326
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 162/325 (49%), Gaps = 7/325 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + + ++ V + + +++ Y++ GGK LR L++ +A+
Sbjct: 6 LSSIYAPINEGLKGVEDEFKLVSESRKKSFPEMAEMLDYIL-VGGKVLRSALSMLSAMCF 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ LA + E +H ATL+HDD +D + RRG+ VWG + ++L+GDFL + A
Sbjct: 65 GAGIKKVLPLATSSEMLHIATLVHDDAIDKADTRRGRRTVNAVWGLEKAILLGDFLFAHA 124
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
ET + + S +A GEL+Q S N D + E+YL I KTA LF A
Sbjct: 125 AETAAETGNMGIVTLFSQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMAT 184
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++A +S + ++SYG NLG++FQ+VDD+LD+ G +MGK +G D NG TLP
Sbjct: 185 KGGAILADASSSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLP 244
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L R D ++ KA ++ + + + A Y A +
Sbjct: 245 ALLLMDRYPDNNPIKDMLNATDRIP---HVAKAVEMINSSDIIDLSYKEAKRYADLACRN 301
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP ++ ++SL ++ +F ++R N
Sbjct: 302 LSQLPKTAARESLYQLAEFIVERKN 326
>gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 163/327 (49%), Gaps = 16/327 (4%)
Query: 6 DLTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYR- 60
LT +++K++ I + + +D ++ Y + GGK++RPM+ L + L ++
Sbjct: 3 ALTQLELDKLSKSIREDLLGTDHPVLSKAASYFFKATSDGGKKVRPMMVLLLSRALNWQR 62
Query: 61 ---GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
LA E IHTA+L HDDV+D + RRG + +V+GN+ ++L GD+LL++A
Sbjct: 63 SDLPQAQRRLAEISEMIHTASLFHDDVIDGAETRRGAPSVHMVFGNKMAILAGDYLLARA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQ---LSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++ E +E +S + L GE+ Q + S+ YL KT L +
Sbjct: 123 SICLARLRNVEVVETMSTIIEHLVRGEVMQLRGSTSSERSGERLVYYLRKNFYKTGSLMA 182
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + ++L+ N + A +G ++G+AFQLVDDVLD+ G ++ +GK D G
Sbjct: 183 NSCKSAALLGEYPNELVDASYRFGKHVGMAFQLVDDVLDFEGSLSSLGKPALADLTAGLA 242
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PV+ A + E I+ + ++++A + ++ + T+ A + + A
Sbjct: 243 TAPVLFAAEECCDLEP-----LIDRKFRNTGDIERAVEYVFQSSGIERTKELARVHAESA 297
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
D++ L S + SL+ + + + R
Sbjct: 298 MDAILELDSSLHRDSLVHLANKVVART 324
>gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum]
Length = 339
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 92/325 (28%), Positives = 155/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
L D++ V I + + + + ++ Y GK +RPM+ + A + Y
Sbjct: 19 LLEDDLKDVYVYIRDALRRSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKE 78
Query: 64 -------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E IHTA+L+HDDV+D S RRGK + ++W ++ + GDF+L+
Sbjct: 79 KSGLLTSQREVAMISEMIHTASLVHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGDFILAV 138
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ K+ + LS V L +GE QL + + YL KTA L + +
Sbjct: 139 ASIMIARLKNNDVTLVLSQVVSDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANS 198
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ +++AG + YG NLG+AFQLVDD+LD+ MGK D + G T
Sbjct: 199 VKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVSSSAAMGKPTAADLKLGLATA 258
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++R L T+Y A + Q+A
Sbjct: 259 PVLFACEKFPELNPMIM-----RRFQEPGDVERAFDLVHKSRGLEQTQYLAKQHCQEAVR 313
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L +S ++K L+ D+ L R+
Sbjct: 314 LANLLEESPYQKGLIVAADYVLNRM 338
>gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 320
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 163/310 (52%), Gaps = 3/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K+ + + S ++ ++ KYL+ + GKR+RP L + + + H+ +A A+
Sbjct: 11 LAKLEEELSLILTSQEPVVQEINKYLLETPGKRIRPALFFLSLALWKEEPQEHLSVAVAL 70
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH+ATL+HDDVVD S +RRGK + WGN T+VL GD+L ++AF ++ E + ++
Sbjct: 71 ELIHSATLVHDDVVDASKVRRGKPSINEAWGNHTAVLTGDYLFARAFELLTEYGNISLIK 130
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSV 190
+S + ++EGE++Q + D+ ++YL I KTA F + ++
Sbjct: 131 EMSALVRDMSEGEIQQQAQRFCTDLDIKNYLQRIAKKTARFFMVCAKSGGIVARPQDTEA 190
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
AL++YG N+G+AFQL+DD+LD G + +GK +GED R G TLP++ Q +
Sbjct: 191 ICALENYGYNVGMAFQLIDDLLDVTGNEDTIGKPLGEDLRQGVITLPILHVLQVSPHGRE 250
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ +I L M + + A+ Y + A+ +L LP + +++L
Sbjct: 251 FSAQIA--SRQIDDSLLSTLTTEMERHGCAEFVKNYAWQYVKAAQRALEPLPRNPCRQTL 308
Query: 311 MEVVDFCLQR 320
F ++R
Sbjct: 309 DTASRFIVER 318
>gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu]
Length = 426
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 93/340 (27%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
L ++ + + + ++V + +Y G GKR RP + L A L R
Sbjct: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPE 149
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 150 PLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLA 209
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ S + + + Y+
Sbjct: 210 VLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTY 269
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+AG V YG NLG+A+QL+DDVLD+ G +GK
Sbjct: 270 YKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSL 329
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D ++G T P++ A E ++ + G N+ A + ++R + T
Sbjct: 330 SDIQHGIITAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTREL 384
Query: 287 AYSYGQKAKDSLRCLPDS------SWKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 385 AVKHANLAAAAIDSLPENNDEDVRKSRRALLDLTHRVITR 424
>gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL F2-208]
Length = 324
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 6 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 186 LGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 245 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKTGA-KQAEDIATAYLKKAVEIL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 301 DSLPQVPELKPLKQIVRVLDKR 322
>gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
Length = 370
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L + ++ + + I ++ ++L+ +GGKR+RP+LTL A + D+ +
Sbjct: 55 ILTSLARIEERLAEAISYTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEA 114
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+DD+ RRG A+ +WGN ++L GD + S+A +V
Sbjct: 115 AVVVELTHLATLYHDDVMDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVS-DLGT 173
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ + L G+L + + + + Y+ VI+ KT L +AA E SL+AG
Sbjct: 174 RPMKIQAQTFERLVLGQLYETTGVRENQDILDHYIAVIEGKTGSLIAAAGEYGSLLAGAS 233
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245
V Q L +YG +G+AFQL DDV+D + GK G D R G PTLP I
Sbjct: 234 EEVIQMLATYGELVGVAFQLADDVIDIVSDGASSGKTQGTDLREGVPTLPTILLNRAAEA 293
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ I S + L A + + + AY + +A ++ LPDS+
Sbjct: 294 GDESARQVRTLIEADLSSDDALAAAVSALAAHPVTQEAWQIAYDWADRAIAAIAPLPDST 353
Query: 306 WKKSLMEVVDFCLQR 320
K +L + R
Sbjct: 354 AKAALESFAHAVVHR 368
>gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
Length = 319
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 160/314 (50%), Gaps = 8/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + K + D + + K+L+F+GGKR+RP L T ++ + D + A A+
Sbjct: 9 LSKIDNELNKYVEKDN-TLYNASKHLLFAGGKRIRPYLATLTYMLKKDNLDEILPPAVAV 67
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRG+ + +G ++L GD L ++AF + K +
Sbjct: 68 ELIHNYTLIHDDIMDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAFEAISNIKDPKKAH 127
Query: 132 AL----SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ S + EG+ + ++ +DY +I KT L A +E+ +++A
Sbjct: 128 EVLKALSKACVEVCEGQAMDMEFEDRDKISLDDYFEMISKKTGALIIAPIEIGAIMAECT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ R AL Y +G+ FQ+ DDVLD G+ ++GK +G D R GK T+ V+ A +
Sbjct: 188 DEERNALYEYAKRIGMTFQIQDDVLDLIGDNKKIGKPVGSDIREGKKTVIVLHALENLPN 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+K + + + E +K+A I+ ++ + + + ++AK+ L+ D+ +
Sbjct: 248 NKKERLLKILGNNNATDEEIKEAIDILGDS--INYAKNIMKNATEEAKNYLKIF-DAEKR 304
Query: 308 KSLMEVVDFCLQRL 321
K L + DF + R+
Sbjct: 305 KRLEAIADFIMDRV 318
>gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
Length = 321
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKTGA-KQAEDVATTYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
5a2]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 163/321 (50%), Gaps = 4/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L K++ KVN I + + ++ +I V++Y GK+LRP L L A +L
Sbjct: 2 LTDISLLVSKELSKVNDYINRCLYTENPVIQQVIQYSFQQQGKQLRPQLVLIVASVLGND 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A + +H A+L+HDDVVD++ RR K WGN+ +VL GD++L+ +
Sbjct: 62 ITEKTRRGAALVSLLHHASLIHDDVVDEATYRRHKETVNARWGNKLAVLFGDYVLANSLQ 121
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ IE + + L L++ T++EGE+ QL ++ + +E YL +I+ KTA L +A+ +
Sbjct: 122 IAIENQDYDFLPMLTITTQTMSEGEILQLKQAQEIMASEATYLEIIQKKTASLLAASCAM 181
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + + + G +G+AFQL DD++DY N GK D + TLP+I
Sbjct: 182 GAMSVSASQEQIEIMYAIGEQIGMAFQLSDDLIDYGVTTN-AGKATFMDLKAHTLTLPLI 240
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A Q+ + E + S + ++ ++ + + T + Y QKA + +
Sbjct: 241 YALQQASASETQYILSLVKSYNTDDTKFTQEILSLINKVGGIKYTLQKINFYQQKALELI 300
Query: 299 R-CLPDSSWKKSLMEVVDFCL 318
+ L S++ +L+ ++ +
Sbjct: 301 KTHLRPSAYTDALVALIHKMI 321
>gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
blandensis MED217]
gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
blandensis MED217]
Length = 324
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 17 FLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ ++ + + + Y++ GGKRLRP+LTL + E + A A+E H
Sbjct: 13 AYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKALDAALAVEVFH 72
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EA 132
+L+HDD++DD+ LRRG+ W T +L GD +L +A+ + + + +
Sbjct: 73 NFSLVHDDIMDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAYQLFENYEGETFRALAKL 132
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
S A + EG+ + DVT +YL +I+ KTAVL AAL++ +++A
Sbjct: 133 FSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAALKMGAIVANASAENAN 192
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ YG +LGIAFQL DD LD G+ GK +G D K T + A +R +
Sbjct: 193 RIYEYGRDLGIAFQLQDDYLDAFGDPKTFGKQVGGDIIENKKTFLYLTALERLDEVHSKQ 252
Query: 253 WKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
+ + E ++ + ++ A T+ Y A + L CL K L
Sbjct: 253 LQHLFSINPQDPSEKIETVKQLFIDSGAAEATQQEIEKYTNTALEHLDCLDVKEENKTIL 312
Query: 311 MEVVDFCLQRL 321
E ++R
Sbjct: 313 KEFAQALMRRK 323
>gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42]
gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42]
Length = 327
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+
Sbjct: 13 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRF 72
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E
Sbjct: 73 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHTRSFQMMVEAG 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG
Sbjct: 133 SMRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG
Sbjct: 193 STPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRG 252
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ ++ ++ I G S + L+ I+RE AL T A + + A D+ LP +
Sbjct: 253 SQAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANP 310
Query: 306 WKK 308
+ K
Sbjct: 311 YTK 313
>gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 338
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + M +V + + D ++ + +L +GGKRLRP L L TA +
Sbjct: 14 NLVEELTSRMGEVEAQLRLAVQVDDLVVDEATSHLAKAGGKRLRPALCLLTAQLGPRPAS 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A +E H ATL HDDV+D++ LRRG +A+ V+GN +++L GD L ++A +
Sbjct: 74 PDVLDSAVVVELTHLATLYHDDVMDEAPLRRGVPSAQYVYGNSSAILAGDVLFARA-SGI 132
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ EA+ + L G+L + + + + ++ V+ KT L +A+
Sbjct: 133 VAKLGPEAVLLHAETFERLCMGQLHETIGPREGEDPIQHHIQVLADKTGSLIAASGRYGV 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +G ++ + + +G +G+AFQ+ DDV+D + GK G D G PT+P +L
Sbjct: 193 LYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSDPEVTGKTPGTDLLEGVPTMPTLLL 252
Query: 242 FQRG-----TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ + + + NL ++R + + +T A+ + A
Sbjct: 253 RKHAAEGTLDETGQRILTFLDHTDLTEGNNLDTVVELLRNHSVVDETRTLAHQWVNDALT 312
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L +P + +L + RL
Sbjct: 313 HLSAIPQGPVRNALETFARAMVDRL 337
>gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus]
Length = 398
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-- 63
L +D++ + I K + + ++ +Y GK RP++ + A DN
Sbjct: 80 KLGRRDLKNLYEDIKKELLVSTTELKEMCEYYFDGKGKAFRPIIVVLMARACNVHHDNSR 139
Query: 64 -----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GDF+LS A
Sbjct: 140 DVQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNQIWGEKKAVLAGDFILSAAS 199
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 200 VALARIGNTTIVSVLTQVLEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK 259
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++ V + YG N+GIAFQL+DDVLD+ +++GK D + G T PV
Sbjct: 260 AVSILGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTACTDQLGKPTAADLKLGLATGPV 319
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A Q+ + + G ++++A + ++ + T Y A Y +A +
Sbjct: 320 LFACQQFPEMNAMIMRRFSLPG-----DVERARQYVLQSDGVQQTTYLAQRYCHEAIREI 374
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L S +++L+++ + L R
Sbjct: 375 SKLRPSPEREALIQLTEVVLTR 396
>gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
Length = 338
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 27/342 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRI----CSDVEMIPDVVKYLI---------FSGGKRLRPML 49
ML + + + ++ + + I + + +++Y + + GKR+RP+L
Sbjct: 2 MLNQVVQEMLPRIEEELRQVIEATSSPNTPQLSAMLRYHLGWEGEGTGQEAQGKRIRPLL 61
Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
L +A + + + + A A+E +H +L+HDD+ D S LRRG+ + WG ++
Sbjct: 62 VLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDIQDQSTLRRGRPTVWVKWGIAQAINA 121
Query: 110 GDFLLSQAFC-------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
GD + +QAF + + EA L V L EG+ L+ K + E Y
Sbjct: 122 GDAMFTQAFWALNRLEQTISSQTALEASRILHQVCLRLTEGQYLDLAYEKVDTLPLEAYW 181
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
++ KTA L +E+ L + R AL+ +G NLG+AFQ++DD L G+ G
Sbjct: 182 PMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQVLDDWLGIWGDAALTG 241
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K+ D +GK +LPV+ + GKI+ E + ++++ A
Sbjct: 242 KSTESDLVSGKKSLPVLYGLANSETFAQR-----WRRGKITSEEVHDIAGLLQDCGAEAF 296
Query: 283 TEYRAYSYGQKAKDSLR-CLPDSSWKKSLM-EVVDFCLQRLN 322
T A QKA D+L + + L+ E+ L R +
Sbjct: 297 TLNTAEELTQKALDALNRAFEQNRERSLLLSELAKKLLSRKS 338
>gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14]
gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14]
Length = 325
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +++ D++ L + + ++ V+ ++ GKR+RPML L A
Sbjct: 4 LSLIKSSISIDLDDFVALFNQSLSHTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD+LLS A
Sbjct: 64 SDVSLNAAVGLELLHTASLVHDDVVDESDERRGQASVNASYNNKVAVLVGDYLLSTALLY 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V T S+ + LS + TL+ GE+ QLS +N ++E+ Y VI KTA LF A +
Sbjct: 124 VSYTHSEVIVRYLSELGRTLSNGEILQLSNIQNRTISEDAYYDVISMKTAALFEACAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ AG + A + +G LG+ FQ+ DD+ D + E+GK D GK TLPVI
Sbjct: 184 AESAGASHEDTMAAREFGKKLGLIFQIRDDIFD-YYDSKEIGKPTSNDMVEGKLTLPVIY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +E + D ++ E + + +EN + ++ +
Sbjct: 243 ALNSTDNKEMLELAYKVKDHTVTDEEVAQLVQFTKENGGINYAYKIMDRLHEECMIFIDE 302
Query: 301 L-PDSSWKKSLMEVVDFCLQRL 321
+ KKS+ +D+ +R
Sbjct: 303 YVTNPEIKKSITAYLDYVSERS 324
>gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
Length = 325
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 123/320 (38%), Positives = 198/320 (61%), Gaps = 5/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L +D++++ LIL + ++ +I +++++LI SGGKR+RP++ ML Y
Sbjct: 9 LTELKSLIQQDLDEMEHLILYQDNKNITLITEIIQHLIKSGGKRIRPIIFFIICKMLNYN 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ V +A AIEFIH ATLLHDDV+D+S LRRG+ + +WGN+ S+LVGDFLL+ +F
Sbjct: 69 KNDKVYIAAAIEFIHNATLLHDDVIDESELRRGEKTSNFLWGNKASILVGDFLLAVSFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+I+ K+ L LS + T+ GE+ Q+ S N+++++E Y+ +I +KTA LF A E +
Sbjct: 129 LIQCKNLTILSILSKTSNTIIIGEVEQMVASYNINISQEKYIDIISAKTASLFEATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A V N ALK +G NLGI+FQ++DD+LDY + GK +G D GK TLP+I+
Sbjct: 189 ANLAEVNNEKIHALKQFGYNLGISFQILDDILDYTASETQFGKKLGNDLLTGKITLPIII 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+Q +EK FW + ++ KA ++ + A+ A +Y KAK SL
Sbjct: 249 AYQNANHQEKKFWTQLSTNP-----DINKAMFYIKSHSAIEQALNIASTYIDKAKSSLNI 303
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+S +K+ L ++++ L R
Sbjct: 304 FANSDYKQILDKLLNSILYR 323
>gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514]
gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514]
Length = 350
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 2/316 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K + + +E V + K++ I +Y + GK+LRP L +A
Sbjct: 26 KHIAEPVEPFLEAVAQRLEKQVREFDPAIVPYAEYALTGQGKQLRPALVALSANASGTLN 85
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+HV +A IE +H ATL+HDDV+D++ +RRG++ WGN+ +VL GD L + A +
Sbjct: 86 DSHVTIAVIIEMVHLATLVHDDVMDEAEIRRGRLTLAANWGNEIAVLFGDCLFAHALKLA 145
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ E A+++ T+ GE+ Q +N ++ +Y V++ KTA LF+ + ++ +
Sbjct: 146 ASFPTPEICRAVAMATNTVCSGEILQTQQRRNFQFSQPEYFKVLEMKTAELFALSCDLGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G R L+ +GM LG A+QL DD LD G GK++G D GK TLP++LA
Sbjct: 206 CLTGAPAVQRNGLRQFGMALGTAYQLYDDCLDLFGSEAAAGKSLGTDLAKGKLTLPILLA 265
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+++ T EK + I + ++R+ + + Y +K++ +L+ L
Sbjct: 266 WEQATVEEKATLQGNILK--WEPGHFAPVIELLRKYKTFAKSVEIINQYLEKSRQTLKVL 323
Query: 302 PDSSWKKSLMEVVDFC 317
P+S+ + L+ + +F
Sbjct: 324 PESANQAGLIGLTEFL 339
>gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
Length = 253
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 119/245 (48%), Positives = 155/245 (63%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L D+E VN LI KR+ SDV +I + Y+I SGGKRLRP++ L A R
Sbjct: 3 LDPIRALVAHDIEAVNELIRKRLSSDVVLINRLGSYIINSGGKRLRPLVVLLAARACSCR 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H+LLA +E IHTATLLHDDVVD+S +RRG+ AR +WGN SVLVGDFL ++AF M
Sbjct: 63 DHQHILLAAIVEMIHTATLLHDDVVDESDMRRGRETARQIWGNGASVLVGDFLYTRAFEM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E + + S T+AEGE+ QL + DVTEE Y VI KTA LF A ++
Sbjct: 123 MVELQQTAVMGIFSRATNTIAEGEVLQLLNIHDPDVTEERYREVIFRKTAALFEAGCRLA 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+ + A+ +YG +LG AFQL+DD LDY G E+GKNIG+D GKPT+P I
Sbjct: 183 ALLGARSVQDQAAMAAYGRHLGTAFQLIDDALDYDGNAQEIGKNIGDDLAEGKPTMPFIY 242
Query: 241 AFQRG 245
A Q G
Sbjct: 243 AMQNG 247
>gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
Length = 323
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +DL E + + ++ + + + + Y+I GGKRLRP++ L +
Sbjct: 4 LDRYQDLVA---EAIEKH---QFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGS 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A AIEF H TL+HDD++D + LRR K + G +L GD LL +A+
Sbjct: 58 LEKAMKPALAIEFFHNFTLIHDDIMDGAPLRRNKPTIHTLHGINVGILSGDALLIKAYQF 117
Query: 121 VIETKSQEALEALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + + ++L + T EG+ ++ N +VT EDY+ +I KT VL +A+
Sbjct: 118 FEDLEPELFKKCITLFSETGAVLCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASF 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++IAG +AL +G ++GIAFQ++DD LD G + GK D K T+
Sbjct: 178 KIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKKTVL 237
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+LA + T+ E+ + +++ + I R + + Q +D
Sbjct: 238 YLLAMENATEEERKELNYWYSKKTDNIDKIYCVEKIFRRTKVDEKVLRLIQKHNQIGQDC 297
Query: 298 LR--CLPDSSWKKSLMEVVDFCLQRLN 322
L+ LP+ K+ +E+ ++ L+R +
Sbjct: 298 LKTINLPE-DKKQPFIELANYLLKRES 323
>gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
pombe 972h-]
gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1
gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces
pombe]
gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
pombe]
Length = 378
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 37/347 (10%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--------- 57
L ++E+++ I + + S+ E + + KY + GK++RP L L +
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKATSLCHGIDRS 95
Query: 58 -----------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ + LA E IH A+LLHDDV+D + +RRG ++ +
Sbjct: 96 VVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSNVA 155
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEAL------EALSLVACTLAEGELRQLSLSKNL 154
+GN+ S+L G+F+L++A + ++ + A + L S +
Sbjct: 156 FGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIK 215
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ Y+ KTA L S + + S+++ +V A YG +G AFQL+DDVLDY
Sbjct: 216 QSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDY 275
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ + +GK G D + G T PV+ A+++ + + ++++A ++
Sbjct: 276 TSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNH-----PSDIQRARSLV 330
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A+ T A Y +KAKDSL CLPDS +K+L + D + R
Sbjct: 331 ECTDAIEQTITWAKEYIKKAKDSLLCLPDSPARKALFALADKVITRK 377
>gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 323
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 89/327 (27%), Positives = 161/327 (49%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +DL E + + ++ + + + + Y+I GGKRLRP++ L +
Sbjct: 4 LDRYQDLVA---EAIEKH---QFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGS 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A AIEF H TL+HDD++DD+ LRR K + G +L GD LL +A+
Sbjct: 58 LEKAMKPALAIEFFHNFTLIHDDIMDDAPLRRNKPTIHTLHGINVGILSGDALLIKAYQF 117
Query: 121 VIETKSQEALEALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + + ++L + T EG+ ++ N +VT EDY+ +I KT VL +A+
Sbjct: 118 FEDLEPELFKKCITLFSETGAVLCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASF 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++IAG +AL +G ++GIAFQ++DD LD G + GK D K T+
Sbjct: 178 KIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKKTVL 237
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+LA + T+ E+ + +++ + I R + + Q +D
Sbjct: 238 YLLAMENATEEERKELNYWYSKKTDNIDKIYCVEKIFRRTKVDEKVLRLIQKHNQIGQDC 297
Query: 298 LR--CLPDSSWKKSLMEVVDFCLQRLN 322
L+ LP+ K+ +E+ ++ L+R +
Sbjct: 298 LKTINLPE-DKKQPFIELANYLLKRES 323
>gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
K601]
gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
K601]
Length = 349
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+
Sbjct: 35 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRF 94
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E
Sbjct: 95 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAG 154
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG
Sbjct: 155 SMRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAG 214
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG
Sbjct: 215 STPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRG 274
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ ++ ++ I G S + L+ I+RE AL T A + + A D+ LP +
Sbjct: 275 SQAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANP 332
Query: 306 WKK 308
+ K
Sbjct: 333 YTK 335
>gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Rothia dentocariosa M567]
gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Rothia dentocariosa M567]
Length = 353
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L + ++ + + I ++ ++L+ +GGKR+RP+LTL A + D+ +
Sbjct: 38 ILTSLARIEERLAEAISYTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEA 97
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+DD+ RRG A+ +WGN ++L GD + S+A +V
Sbjct: 98 AVVVELTHLATLYHDDVMDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVS-DLGT 156
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ + L G+L + + + + Y+ VI+ KT L +AA E SL+AG
Sbjct: 157 RPMKIQAQTFERLVLGQLYETTGVRENQDILDHYISVIEGKTGSLIAAAGEYGSLLAGAS 216
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245
V Q L +YG +G+AFQL DDV+D + GK G D R G PTLP I
Sbjct: 217 EEVIQMLATYGELVGVAFQLADDVIDIVSDGASSGKTQGTDLREGVPTLPTILLNRAAEA 276
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ I S + L A + + + AY + +A ++ LP+S+
Sbjct: 277 GDESARQVRTLIEADLSSDDALAAAVSALAAHPVTQEAWQIAYDWADRAIAAIAPLPEST 336
Query: 306 WKKSLMEVVDFCLQR 320
K +L + R
Sbjct: 337 AKAALESFAHAVVHR 351
>gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
18170]
gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
18170]
Length = 324
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+++++ +++ + L + S M+ DV+ Y+ GK +RPML + A +
Sbjct: 4 IEIIKRPIERELSEFKMLFDATLTSTAPMLGDVLGYIRNRNGKMMRPMLVMLMAKLYGVV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E +HTA+L+HDDVVD S RRG+ + ++ N+ SVLVGD++L+ +
Sbjct: 64 NPATLHSALSLELLHTASLVHDDVVDKSDKRRGQASVNALYDNRVSVLVGDYMLATSLRH 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
TK E ++ ++ + L+EGE+ QL+ + N D +EE Y VI+ KTA LF+A+ E
Sbjct: 124 AAYTKEIELVDLVARLGQNLSEGEIVQLANTNNTDFSEEIYFDVIRKKTAALFTASAESG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L +G +GIAFQ+ DD+ DY +GK G D GK TLP +
Sbjct: 184 ALSVKASAEDVDNAALFGEMIGIAFQIKDDIFDYFENEE-LGKPTGNDMLEGKLTLPALY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
+EK I K S E + +++ + + + Y KA L
Sbjct: 243 VLNEKADKEKRELALRIRSLKASHEEIASFVSYVKQEGGIEHADKVMHDYRNKALALLPE 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ DS + +L VD+ ++R
Sbjct: 303 QMDDS-LRMALTAYVDYVVERK 323
>gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
33277]
gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
33277]
Length = 324
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLT-LATALML 57
++ ++ ++ + + S E + +K I +G GK +RP+LT L A+
Sbjct: 4 LEAIQAPINGFVKDFHHSFEHALDSQSEWMTKAIK--ILNGSTGKHVRPLLTGLVAAVCA 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A +E IHTATL+HDDV+D ++ RRG + N+ +VL+GDF+LS A
Sbjct: 62 GKTNSTTLEAAVLLEMIHTATLIHDDVIDMASTRRGVPTLNAFFDNRVAVLMGDFVLSSA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
I + +S + L+EGE+RQ + + + E+ Y+ VI+ KTA+LFSA
Sbjct: 122 LMRAIALNDIRIITIISQLGRELSEGEIRQFETADKVIIDEDIYMGVIRQKTAMLFSACA 181
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
EV ++ + + +K G LG AFQ+ DD+ DY GK G D R GK TLP
Sbjct: 182 EVGAITVQAPVEIVEKVKRVGELLGYAFQIRDDIFDYYRNDV--GKPTGNDIREGKITLP 239
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ A + ++ + ++ S E+L+ E+ +V E + + KAK
Sbjct: 240 LLFALKNEQSALRDHCLTILDQKAFSEEDLQLLTSFAIEHGGIVYAERKMAEFIDKAKAE 299
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L PDS +SL+ + DF +QR
Sbjct: 300 LAVFPDSDALQSLLALADFIVQR 322
>gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 337
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 5 EDLTLKD----MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++L + ++N + + + + +Y++ GKR+RP LTL + +
Sbjct: 12 QELVENKYRLYLSRINSALGNCFVRESPITLYAPARYILEGKGKRIRPFLTLLASEAVCG 71
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ + +A A+E +H TL+HDD++D + LR G+ W ++L GD +++ A+
Sbjct: 72 SSEHALNVALAVEILHNFTLIHDDIMDQAELRHGRPTVHRRWNTNAAILTGDMMIAYAYE 131
Query: 120 MVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +E +S+ + L+ T+ EG+ + L + D T DYL +I KT L SAA
Sbjct: 132 LALEAQSERHGELVHILNDANITICEGQALDIELEEKNDATIADYLDMIAKKTGRLISAA 191
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
LE + + ++L +G +G AFQ+ DD LD E + GK G D NGK T
Sbjct: 192 LEAGGVAGDATDEQLRSLVLFGEKIGQAFQIQDDYLDIMAEDGKSGKMAGGDIINGKKTY 251
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
++ + + + +E++ I++ I + + + I ++ L +T ++A
Sbjct: 252 LLLRSLELTSGKERDLLNFIISNKGIEAQRVPEVRAIYQQCGVLEETASLINRTTEEALS 311
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
++ LP + ++ L + ++R
Sbjct: 312 AIDGLPYAEGREYLKGFANILMKR 335
>gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
Length = 332
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 8/324 (2%)
Query: 5 EDLTLKDMEKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++L + + + I + E + +Y+I GKR+RP LTL + +
Sbjct: 7 QELVEEKYRRYHKRINDALAGCFSADKPETLYAPARYIIEGKGKRIRPFLTLLASESVCG 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+N + A A+E +H TL+HDD++D + LR G+ A W ++L GD +++ A+
Sbjct: 67 SSENALNAALAVEILHNFTLMHDDIMDAADLRHGRPAVHKQWNTNVAILSGDMMIAYAYE 126
Query: 120 ---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +E + L+ T+ EG+ + L + T DYL +I KT L SAA
Sbjct: 127 LALQSKTERHRELIHILNHANITICEGQALDMELELKKNATISDYLDMIAKKTGRLISAA 186
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
LE + AL ++G +G AFQ+ DD LD E + GK G D NGK T
Sbjct: 187 LEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLDIMAEDGKSGKIPGGDVINGKKTY 246
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
++ + + + +K +S I++ I + + + I L + + A
Sbjct: 247 LLLRSIELTSATDKELLQSVIDNNGIGADRVSEVKEIYERCGVLDEARAMINQDTEDALA 306
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L LP + ++ L ++R
Sbjct: 307 ALESLPYAEGREYLSGFAGILMKR 330
>gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 349
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+
Sbjct: 35 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRF 94
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E
Sbjct: 95 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAG 154
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG
Sbjct: 155 SMRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAG 214
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG
Sbjct: 215 STPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRG 274
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ ++ ++ I G S + L+ I+RE AL T A + + A D+ LP +
Sbjct: 275 SQAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANP 332
Query: 306 WKK 308
+ K
Sbjct: 333 YTK 335
>gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
Length = 300
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 164/310 (52%), Gaps = 14/310 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ I + + +V+ + ++ Y+ +GGKR+RP+L L TA ML + + LA I
Sbjct: 4 LEQLERSITEFLMPEVKTVLEIGNYIASAGGKRVRPILMLETARMLGGDTERLIPLAVGI 63
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E+IH A+LLHDDVVD + +RRG+ +A V+GN VL GD++ ++A + + +++E
Sbjct: 64 EYIHMASLLHDDVVDGADVRRGRPSANRVFGNPIVVLTGDYMYARALWLYSLYGNMKSIE 123
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S +AEG++ +L + EE YL ++ KT LF A++ V +L++
Sbjct: 124 IVSRAVMQMAEGQVLELLHIG-KIIDEETYLRIVDGKTGALFGASMGVGALMS--GYPGF 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ +G AFQ+VDD LDY G+ MGK G D R GK T P++ +
Sbjct: 181 EEFYRMGVKVGRAFQMVDDALDYIGDQKVMGKPAGNDLREGKCTYPLL--------SVLH 232
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + ++++ + E + T+ RA ++ L+ P S L+
Sbjct: 233 TMDRSKLEESLRKGDVEEIRSKVVELGGVEKTKSRAKKEIEEVISYLKSFPQS---DKLI 289
Query: 312 EVVDFCLQRL 321
E++ ++R+
Sbjct: 290 ELLVSLVERV 299
>gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 334
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 90/337 (26%), Positives = 168/337 (49%), Gaps = 20/337 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +L L K +++ + + + D + + V Y + +GGKRLRP+LTLATA +
Sbjct: 1 MDVLTALHAKYGQEIEKALERYLAIDLADDFHEAVLYQLKTGGKRLRPLLTLATAEAVSG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL------ 113
R + + A +E IH +L++DD++D +RRG R +G+ ++L+G +
Sbjct: 61 RWEPALPAAAIVELIHNYSLIYDDIIDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIEE 120
Query: 114 --------LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
L A + K+ + E L ++ + + ++ +VT +DY+ ++
Sbjct: 121 AVLETPKPLVFAREVAKVIKAIDEGERLDILFECAGRSDPY-FAKARWKEVTLDDYVKMV 179
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT VL +AA + L + +A ++G+N GIAFQ++DDVLD G+ + GK I
Sbjct: 180 SLKTGVLIAAAAKWGVLSVSDDGDLAEAAWNFGLNAGIAFQIIDDVLDIYGDPKKFGKEI 239
Query: 226 GEDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D + K V +A + ++ S + + +K+A I+ E +A +
Sbjct: 240 GKDIKEHKRGNAVVAIALSKLPPHKRERLLSILRIDSMRDAEVKEAVEILDEAKAKEEAL 299
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y ++A+ L +P++ K+L ++++F L+R
Sbjct: 300 RLADRYREEAERHLAKIPNN---KTLRDLLNFILKRQ 333
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 84/334 (25%), Positives = 139/334 (41%), Gaps = 50/334 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEM---IPDVVKYLIFSGGKRLRPMLTLATALM 56
M LE + +N + + + SD + I + + Y + +GGKRLRP+L L TA
Sbjct: 1 MNSLEQSLQHAIPLINQRLEELLSPSDEPLLTTIHEAMLYSVRAGGKRLRPLLCLLTAGA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + +ACAIE IHT +L+HDD+ D+ LRRGK V+G ++L GD LL
Sbjct: 61 LRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSK 168
++AF ++ + L + + G S+ + ++ ++K
Sbjct: 121 NRAFEVLCQLPLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHENK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + + L S++ + YG N+G+AFQ+ DD+LD G+ MGK +G D
Sbjct: 181 TGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T P ++ +
Sbjct: 241 LQNRKSTWPALV--------------------------------------GMNGARKAMQ 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L L DS +L ++ F ++R N
Sbjct: 263 EMIDEANRALDPLGDSPAVTALRDLARFIIERKN 296
>gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 342
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 2/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D + +E+VN + + D ++ + +L+ +GGKR RPMLTL T+++ D
Sbjct: 25 ELSDRLVDGLERVNARLDVVVDHDSPLVREASHHLVDAGGKRFRPMLTLLTSMLGTGISD 84
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A +E H A+L HDDV+D++ +RRG +A V+GN T++L+GD L +A ++
Sbjct: 85 EVVDAAAGVELTHLASLYHDDVMDEADIRRGVPSANAVYGNSTAILIGDLLFGKASELIA 144
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + A + D E YL V+ KT VL +AA + ++
Sbjct: 145 HLGPEAVILQARTFVRLCAGQIEDERQTPDGADPMEY-YLKVLADKTGVLIAAAAQYGAM 203
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G + L YG +G+ FQL DD+LD E GK G D R G TLP
Sbjct: 204 FSGCDERTVEVLGRYGELVGLVFQLSDDILDIASEAETSGKTPGTDLREGVATLPTFYVN 263
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K+ + +A ++R + A+ + +KA + L
Sbjct: 264 ASSDPA-DARLKALLARPLTDDAEHAEALELLRAHPAMEQARAHTLTTARKAAALIDELG 322
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ + +L EV R
Sbjct: 323 EGEVQDALKEVPLSVATRS 341
>gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
Length = 325
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 4/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ L+ K I +D E + + +I SGGK LRP L ++ + + +
Sbjct: 12 LIKHELGLTLALMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA AIE +H ATL+HDDV+D+S RRG + + +G T+V GD+L F ++ E S
Sbjct: 72 LAAAIEILHMATLIHDDVIDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYAS 131
Query: 127 QEALEALS-LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ GE+ Q+ +L+++ + Y I KT LFS A + + +G
Sbjct: 132 DFRGIQQYGHHMNAILNGEMTQMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESG 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + + G+N+G++FQL+DD+LDY ++GK + D R G + P+ILA +
Sbjct: 192 NKIKFAKNAEKIGLNIGVSFQLMDDILDYTDNSQQIGKPVHNDMREGVYSAPLILAMAQH 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F K++ ++ ++ ++ E + + A +Y +KA + LPD
Sbjct: 252 KDLFFPF---LKKKNKMTDQDTEEIAKLVIEFDGIKKAKKYAETYTKKALIQINDLPDKP 308
Query: 306 WKKSLMEVVDFCLQRLN 322
KK+L+++ L R +
Sbjct: 309 AKKALIDITRELLDRQS 325
>gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
ATCC BAA-1163]
gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
ATCC BAA-1163]
Length = 325
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 4/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ L+ K I +D E + + +I SGGK LRP L ++ + + +
Sbjct: 12 LIKHELGLTLALMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA AIE +H ATL+HDDV+D+S RRG + + +G T+V GD+L F ++ E S
Sbjct: 72 LAAAIEILHMATLIHDDVIDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYAS 131
Query: 127 QEALEALS-LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ GE+ Q+ +L+++ + Y I KT LFS A + + +G
Sbjct: 132 DFRGIQQYGHHMNAILNGEMTQMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESG 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + + G+N+G++FQL+DD+LDY ++GK + + R G + P+ILA +
Sbjct: 192 NKIKFAKNAEKIGLNIGVSFQLMDDILDYTDNSQQIGKPVHNNMREGVYSAPLILAMAQH 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
F K++ ++ ++ ++ E + + A +Y +KA + LPD
Sbjct: 252 KDLFFPF---LKKKNKMTDQDTEEIAKLVIEFDGIKKAKKYAETYTKKALIQINDLPDKP 308
Query: 306 WKKSLMEVVDFCLQRLN 322
KK+L+++ L R +
Sbjct: 309 AKKALIDITRELLDRQS 325
>gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63
L KD++ + I K + E + + Y GK +RPM+ + A L +
Sbjct: 101 LAQKDLKSLYEDIRKELFVSKEELKFLCDYYFDGKGKAIRPMIVVLMARALNIHSNRSGD 160
Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A E IHTA+L+HDDV+D S RRGK +WG + ++L GDF+LS A
Sbjct: 161 LLPGQRAIAMISEMIHTASLVHDDVIDGSDQRRGKTTINEIWGERKAILAGDFILSAASM 220
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + ++ LS V L GE QL +N + YL KTA L + + +
Sbjct: 221 ALARIGNITVVKVLSQVIEDLVRGEFMQLGSKENEKERFKHYLEKTFKKTASLIANSCKA 280
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S++ V + YG N+GIAFQLVDDVLD+ N++GK D + G T PV+
Sbjct: 281 VSILVNSDPEVHEIAFQYGKNVGIAFQLVDDVLDFTSGANQLGKPSAADLKLGLATGPVL 340
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q+ + S ++ +A+ + ++ + T Y A Y Q+A +
Sbjct: 341 FACQQFPELHAMIM-----RRFSSKGDVDRAWQYVLQSDGVEQTNYLARRYCQEAIRQIS 395
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L S+ + +L+ + + L R
Sbjct: 396 LLRPSAERDALIRLTEMVLTR 416
>gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1]
gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1]
Length = 324
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 6/311 (1%)
Query: 17 FLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ +++ S+ + + + + Y++ GGKRLRP+LTL TA + + A A+E H
Sbjct: 13 SYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAVEVFH 72
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EA 132
+L+HDD++DD+ LRRGK W T +L GD +L A+ + K + E
Sbjct: 73 NFSLVHDDIMDDAPLRRGKETVHEKWDINTGILSGDAMLILAYQLFENYKGKTFRALAEL 132
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
S A + EG+ + DVT +YL +I+ KTAVL AA+++ +L+A Q
Sbjct: 133 FSKTAIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGALVAEASEKDAQ 192
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ +G LG+AFQL DD LD G+ GK +G D K T + A Q + K
Sbjct: 193 GIYDFGRYLGLAFQLQDDYLDAYGDPETFGKQVGGDIIENKKTYLYLKALQNASDANKEK 252
Query: 253 WKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSL 310
+ + E ++ I E+ A + Y KA L+ L K+ L
Sbjct: 253 LTQLFSVQPDDTTEKVQAVMEIFNESNAPEAIKTAIEDYTSKAFQLLQTLNIGAKEKQLL 312
Query: 311 MEVVDFCLQRL 321
+ + R
Sbjct: 313 QTFGEQLMNRT 323
>gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
Length = 330
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 8/325 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ +E + + I + + Y++ GGKRLRP+LTL TA +
Sbjct: 7 MQNIEQYQKSFLNYLEDF---AIDKQPNNLYAPINYILKLGGKRLRPVLTLMTAEVFGEE 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N + A ++E H +L+HDD++D++ LRRGK W T +L GD +L A+ +
Sbjct: 64 AKNAMNAALSVEVFHNFSLVHDDIMDEAPLRRGKKTVHEKWNLNTGILSGDAMLILAYQL 123
Query: 121 VIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + S A + EG+ + DVT +YL +I+ KTAVL AA+
Sbjct: 124 FENYEPETFLALAKLFSKTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAM 183
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ +++A + A+ +G LG+AFQL DD LD G GK +G D K T
Sbjct: 184 KMGAIVAKASAEDQNAIYDFGSYLGVAFQLQDDYLDAFGNPETFGKQVGGDILENKKTYL 243
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ + G+ EK ++ IS + ++ + + A T+ Y KA
Sbjct: 244 YLKTIELGSGIEKTSLVEKMSSKSISDNDKVESVKALFNNSGASEATQNAVKKYTNKAFK 303
Query: 297 SLRCLPDSSWKKSLMEV-VDFCLQR 320
L L S KK L+ + + + R
Sbjct: 304 VLETLNISEDKKQLLRLFGEQLMNR 328
>gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 325
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L ++ ++N + + I + +Y + +GGKRLRP+LT+ A +L Y
Sbjct: 1 MITLRTFIEQEQPRINAALAEAAAELPVSIMPIAQYAMGNGGKRLRPLLTVLVARLLGYA 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ LA A+E H ATLLHDDV+D++ +RRG A V+G ++L GD LL++ +
Sbjct: 61 DNDIYPLAAAMEMFHVATLLHDDVMDNAEMRRGSTATHKVFGVTETILAGDALLAKGNQI 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V A S A GE+ +++ Y +I KTA + + +
Sbjct: 121 VAGFGDPRLTAATSDAIAQTANGEILEIANQGKNAPDLLIYNQIIAGKTAWMIRTSCNIG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A YG NLG+AFQ+VDD LD + GK G D R GK T P+
Sbjct: 181 AVRANGTPEQVAGATDYGFNLGMAFQIVDDALD-FAPSSLTGKPEGGDVREGKLTPPIFF 239
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E++ + + + + E+++ +R T A +Y +KA+++L
Sbjct: 240 YANSLAPAERDAFFARFAEQSFTDEDVRHVIDTVRAQGFDDKTRGIADTYLRKAQENLDA 299
Query: 301 ----LPDSSWKKSLMEVVDFCLQR 320
LP S + + L + + R
Sbjct: 300 LTAGLPASPYGEILTSFIGYVRNR 323
>gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 316
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 7/316 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACA 70
ME V + + + D + +L+ +GGKRLRP L L A + G + + A A
Sbjct: 1 MEAVERRLGEEVRLDDLQVDPATTHLVGAGGKRLRPALVLLAAELGPRPGAEAVLDSAVA 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H A+L HDDV+DD+ +RRG + + ++GN ++L GD L ++A + + Q
Sbjct: 61 VELTHLASLYHDDVMDDAPMRRGVPSVQSLFGNSVAILAGDVLFARASLVTSKLGPQAVK 120
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ L +G+L + + + Y+ V++ KT L + + L +G +
Sbjct: 121 LHATTFER-LCQGQLHETIGPRASVSPRDHYIRVLEDKTGSLIATSARYGVLFSGGSWEL 179
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
AL YG +G+AFQL DDV+D + GK G D R G T+P +L + G K
Sbjct: 180 ADALAQYGECIGVAFQLADDVIDIESDGAVTGKTPGTDLREGVDTMPTLLLRELGEKGAL 239
Query: 251 NFW-----KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ N E L +R + L +T A + +A +S+R LP+
Sbjct: 240 DAEGAAILDLLDNADLSGDEALADVVARLRRHSVLEETREMAQDWVSRAIESIRFLPEGE 299
Query: 306 WKKSLMEVVDFCLQRL 321
++ L+ + R
Sbjct: 300 IREELVRFARLTVDRS 315
>gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 324
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 11/322 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ L +++V + + + + D + GGKRLRP + L
Sbjct: 10 ELQSL--PGLKQVEARLRELSRGEDSWTPLFSD----SVIRGGKRLRPAMVLLCGSFYAS 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
V +A AIE IHTA+L+HDDV+D +A RRG WG+ +VL GDFL ++AF
Sbjct: 64 PQTELVDMATAIELIHTASLVHDDVIDHAASRRGHPTVSAKWGDHQAVLYGDFLFARAFS 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + LE ++ + EGE+ Q + N +VTE DY+ I KTA SA
Sbjct: 124 LLTKHGQVGVLENMTRAISLMCEGEIEQAASRFNPNVTEADYISYIHKKTAYFISACCLA 183
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + ++AL ++G+ LG AFQ++DD+LDY +GK +D + G TLPVI
Sbjct: 184 GAEACDMPPAEKKALATFGLQLGYAFQMIDDLLDYTANPGALGKPTLQDLKEGYLTLPVI 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ R + I + + N++ ++E L T+ RA + +AK +L
Sbjct: 244 RLLK--EPRFALHVRKIIENRDFTANNMEFISRALQECGILQQTQERARTLIDRAKRNLE 301
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP K L + D+ ++R
Sbjct: 302 KLPQKPPKIILSRLADYVVRRT 323
>gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 337
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 92/326 (28%), Positives = 144/326 (44%), Gaps = 8/326 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
LE +E V +L+ + S ++ ++ +L +GGKR+RP+LTL A + E
Sbjct: 12 DLESRITPGLEVVERRLLEAVSSSRDLTDELTSHLAVAGGKRMRPLLTLVCAQLGESDRR 71
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A
Sbjct: 72 LDDAVLTAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARASL 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + L +G+L + + + YL V+ KT L S A
Sbjct: 132 LVASLGPEIVAHHARTFER-LCQGQLNETFGPTHGADRVDFYLQVLADKTGSLVSTAASF 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP-- 237
+L++G V + +G +G+AFQ+ DDVLD + GK G D R G TLP
Sbjct: 191 GALLSGAGRLVADVVADFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVL 250
Query: 238 --VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ S E L +R + L +T A + A
Sbjct: 251 LLRRRQEAGTIDEAGARILRDLAGDLSSDEALAGVVEQLRTHDVLEETRELARRWASDAV 310
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
D+L LP K +L+ + + RL
Sbjct: 311 DTLEALPKGEAKTALVAFANLMVDRL 336
>gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1]
gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase) [Halobacterium salinarum R1]
gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1]
gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Halobacterium salinarum R1]
Length = 347
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 23/329 (6%)
Query: 13 EKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--------- 62
++VN I + ++ E + + +Y++ +GGKRLRP + L TA L D
Sbjct: 19 QQVNDAIDDDLPVAEPERLYEASRYILEAGGKRLRPAVLLLTAEALADTSDTPPYREFPD 78
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A +IE I + TL+HDD++DD LRRG A + +T++L GD L S+
Sbjct: 79 CIGGHVDVMSAAVSIEVIQSFTLIHDDIMDDDDLRRGSPAVHREYDTETAILAGDTLYSK 138
Query: 117 AFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
AF ++ + A+ L+ + EG+ + DV ++YL +++ KTAV
Sbjct: 139 AFEIMLETGAPPERGLRAMRTLAETCTHICEGQAMDIDFETRGDVVTDEYLEMVELKTAV 198
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L++AA + L+ +AL +YG+ +G AFQ+ DDVLD E+GK G D
Sbjct: 199 LYAAAATLPGLLLSADEETVEALYNYGLRVGQAFQIQDDVLDLTVPSAELGKQRGSDLVE 258
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T+ + A + G + + ++ ++ A +++ ++ A
Sbjct: 259 DKTTIITLHAAEHGVDVDGLLD--AEDPADVTEAAVQAAVQALQDAGSIQYASDLAEDLV 316
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ K L LP++ + L ++ D+ ++R
Sbjct: 317 EEGKAHLEVLPENEARHRLEQIADYLIER 345
>gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246]
Length = 348
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
D+ + + + + +V++L GKRLRP L L TA H
Sbjct: 36 PIASDIAEAERIFDRTLAPHKGPFGPLVEHLRHYRGKRLRPALLLLTAEACGGVAPAHHT 95
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA A+E IHTATL+HDDV+D++ +RR R WGN+ S+L+GD L + AF + T
Sbjct: 96 LAAAMEMIHTATLVHDDVLDEADVRRHAPTFRAGWGNKVSILLGDMLFTHAF-HLTSTVD 154
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + V + GELRQ++ NL+++E DY VI KTA L + +L AG
Sbjct: 155 GRACQITGEVTNRVCAGELRQVTERGNLELSEADYFAVIDGKTAALTECCGRLGALYAGA 214
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
V + SYG ++G+AFQ+ DD+LD G GK +G D K TLPVI R
Sbjct: 215 SEEVAAKMASYGRSVGLAFQIADDLLDLTGTEEAAGKTLGTDLEQQKLTLPVIHCLNRLP 274
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
E + I G + + + + +++ + RA + A+ L CLP
Sbjct: 275 AGEAAKLRDLIRAGGEGLG--ARVLQALEKTQSVTYAKRRAEELSRSARQELECLPRGDA 332
Query: 307 KKSLMEVVDFCLQR 320
+ L V ++ ++R
Sbjct: 333 RSILEAVTEWSIRR 346
>gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
J1-023]
Length = 321
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 7/314 (2%)
Query: 9 LKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD++ V + K + + E D +L+ +GGKR+RPM +A + +
Sbjct: 11 QKDIDLVEKELKKALTGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLSPNADFEAVKN 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 71 AGVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKD 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 131 VAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQ 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L +G +G+AFQ+ DDVLD+ G E+GK GED G TLP
Sbjct: 191 SEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLSQGNVTLP----VFFAM 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + E + ++++ A E A +Y +KA +L LP
Sbjct: 247 EDPFLKKRISQVTEDTEAEEIAALVEEIKKSGA-KKAEDVATAYLKKAVATLDSLPQVPE 305
Query: 307 KKSLMEVVDFCLQR 320
K L ++V +R
Sbjct: 306 LKPLKQIVRVLDKR 319
>gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
Length = 321
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 7/314 (2%)
Query: 9 LKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD++ V + K + + E D +L+ +GGKR+RPM +A + D
Sbjct: 11 QKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKN 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 71 ASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKD 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 131 VAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQ 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 191 SEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP----VFFAM 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + + E + +++ A E A +Y +KA + L LP
Sbjct: 247 EDPFLKKRISQITEETPAEEIAVLVEEVKKTGA-KQAEDVATTYLKKAVEILDSLPQVPE 305
Query: 307 KKSLMEVVDFCLQR 320
K L ++V +R
Sbjct: 306 LKPLKQIVRVLDKR 319
>gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanococcus maripaludis S2]
gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanococcus maripaludis S2]
Length = 317
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 81/314 (25%), Positives = 157/314 (50%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ K++ + K + D + + K+L+ +GGKR+RP L++ T L+ + + A ++
Sbjct: 8 LSKIDSELKKYMEKDTK-LYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRG V+G ++L GD L ++AF + +
Sbjct: 67 ELIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ V + + T ++YL +I KT L A +E+ +++A
Sbjct: 127 EVLKVLSKACVEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCTP 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R+AL +Y +G+ FQ+ DDVLD G+ +GK +G D GK T+ VI A + ++
Sbjct: 187 EEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSED 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + + + + +A ++ ++ + + ++AKD L+ D+ +K
Sbjct: 247 KKERLLQILGNQDANQQEVAEAIELL--ADSINYAKDTMKNATEEAKDYLKIF-DAEKRK 303
Query: 309 SLMEVVDFCLQRLN 322
+L + DF ++R++
Sbjct: 304 NLENIADFIIERIH 317
>gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
Agy99]
gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
Agy99]
gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
Length = 335
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
+ + L+ + E++ D + +L +GGKR RP+ T+ +A + G
Sbjct: 17 EFATTVRDGVASIERLMDAELRGADEVMTDSLLHLFLAGGKRFRPLFTVLSAQVGPNPGA 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D V+ IE IH ATL HDDV+D++ +RRG +A WGN ++L GD+LL+ A +V
Sbjct: 77 DEVVIAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANARWGNNVAILAGDYLLATASRLV 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L G++R+ + E YL V+ KT L AA
Sbjct: 137 SRLGPDAVRIVADT-FAQLVTGQMRETRGAPEGVDMIEQYLKVVHEKTGCLIGAAGRFGG 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G + L G +G AFQ+ DD++D + + GK G D R G TLP++ A
Sbjct: 196 MFSGADGEQVERLNRLGGIVGTAFQIADDIIDIDSDTEQSGKLPGTDLREGVRTLPMLYA 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + +A ++R + + + Y +A+ L L
Sbjct: 256 LRQTGSDGARLRTLLAG-PIRDDAEVFEALALLRASPGMDQAKEVLGQYAARARHELDLL 314
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD +++L +VD+ + R
Sbjct: 315 PDVPGRQALAALVDYTVNR 333
>gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis]
gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis]
Length = 427
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 12/312 (3%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-------A 70
I + + VE + V Y GK +RP + L A Y ++
Sbjct: 121 RIKHELNTSVETLQRVSHYYFDGKGKYIRPRIVLLMAAATNYHSHRSRVILHDQETAAMI 180
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IHTA+L+HDDV+D + RRGKVA L++G++ +L GD++LS+ + + EA+
Sbjct: 181 SEMIHTASLIHDDVIDRADTRRGKVAINLMYGDKNCILAGDYILSRVSLAIARFGNVEAV 240
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ L+ + L GE QL +N D YL KTA L + + + L+ +
Sbjct: 241 KLLAEIVDELVRGEFMQLGSKENPDERFTHYLKKTYKKTASLIACCCKTAVLLGDSPPDI 300
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ YG N+GIAFQLVDDVLD+ EMGK D + G T PV+ A ++
Sbjct: 301 QDIAFQYGRNVGIAFQLVDDVLDFVSSKQEMGKATAADLKLGLATAPVLFACEKFPDLNS 360
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ ++++AF + ++ + T A Y ++A + L S ++++
Sbjct: 361 -----LVMRRFKEPGDVEQAFDAVYQSDGISRTYDLANQYAKEALRQVNKLDSSPERQAI 415
Query: 311 MEVVDFCLQRLN 322
+ + L R N
Sbjct: 416 INITHKILNRRN 427
>gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
Length = 319
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E + + SDVE I + LI +GGKR+RP L L + L + LA A+E
Sbjct: 15 EAFERRLRALLRSDVEFIQLIEDDLIAAGGKRIRPRLALLASRALGGVPHE-MELALAVE 73
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H+ATLLHDD+VDD+ RRG+ AA +GN SVL GD+LLS+ ++ ET E +
Sbjct: 74 LLHSATLLHDDLVDDAETRRGREAAFRKYGNAVSVLSGDYLLSRVLFLLAETGRIELVHL 133
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ A LAEGE+ Q + + +E Y +I+SKTA L AA E ++L+ ++R
Sbjct: 134 FAEAARQLAEGEVLQFQAAAYQEYSEAQYYRIIESKTAALMRAATEGAALLGRAPETLRM 193
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL +YG G+AFQ+ DD LD G +GK +G D R GK TL + E
Sbjct: 194 ALVTYGREYGMAFQMRDDYLDLMGASERLGKPVGGDVREGKVTLITLWL----LDAEPER 249
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ +++ + ++A +L LP S K +L
Sbjct: 250 VGKVLLRRGREPDDVAFLRELAVRTGVAERVVEVIGERIRRALAALEVLPGSEAKSALEG 309
Query: 313 VVDFCLQRL 321
+ L+RL
Sbjct: 310 LALAELERL 318
>gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
Length = 320
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 86/324 (26%), Positives = 149/324 (45%), Gaps = 13/324 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + K +V+ LI + V + +L+ +GGKRLRP + + A + +
Sbjct: 2 ELIEYLEKVGNQVDRLIDRYFGDPVGELNKASAHLLTAGGKRLRPAVMMLAADAVRKGSS 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ + A A+E H+ TL+HDD++D +RRG W T++L GD L ++AF +
Sbjct: 62 DDLMPAAIALELTHSFTLIHDDIMDGDEVRRGVPTVNKKWDEPTAILAGDVLYARAFAFI 121
Query: 122 IETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + A+ L++ + G+ ++ DV+EE+YL ++ KT L++A+
Sbjct: 122 CQALAMDAAKLRAVSMLAVTCEEICAGQHLDMAFEDRDDVSEEEYLEMVGKKTGALYAAS 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ ++AG AL YGMN+G+AFQ+ DD++D GK+ D R GK TL
Sbjct: 182 TAMGGVLAGGSQPQVDALYRYGMNIGVAFQIQDDLIDLLASPERSGKDRASDIREGKQTL 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I A + G ++ + + +N + + + A A
Sbjct: 242 INIKAREHGFDLAPY-------RRRLDDAEIDDLIQQLTDNGVIGEVKATAEGLVTSAGK 294
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
L L S K L+ + F ++R
Sbjct: 295 ILAILKPSDEKDLLISIGTFFVER 318
>gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
DMIN]
gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
DMIN]
Length = 326
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + + ++E L S + +I ++ Y GK +RP+ ML
Sbjct: 6 LEKINFIIKNEIEIFETLFRNNFYSKIPLIQEINNYFFKIKGKYIRPIFVFLITKMLGNI 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
LA IE IHTA+L+HDDV+D S RRG ++ +W N+T+V+ GD++ S++ +
Sbjct: 66 SKKTYDLAILIELIHTASLIHDDVIDFSNTRRGFLSINAIWQNKTAVIFGDYIFSKSLNI 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
I+ + L +S ++EGE+ Q+ N + E Y +I KTA+L SA E
Sbjct: 126 AIKNNYIDYLNLISKTIEQMSEGEILQMKYFNNFFIKEYIYNIIIFKKTAILISACCEGC 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + +K +G G+AFQ+ DD+LD +N R K TLP I
Sbjct: 186 AKSLNKKKKIVLNIKKFGELAGMAFQIKDDLLD-YKNHINDNENYFLLLREFKITLPFIY 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ +K+ KN+ + N+ I+ +L K ++ + + + Y+ + KA L
Sbjct: 245 ALKKTSKKYKNWLFNEFNNKNINKYSLIKILNFIKNSGGIEYSIYKIKLFTNKALLLLNN 304
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
P++ KSL ++ F +RL
Sbjct: 305 YPNNKANKSLKYLILFNKERL 325
>gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
Length = 317
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E+++ + K + D + K+L F+GGKR+RP L++ T + + + + A ++
Sbjct: 9 LEEIDKELKKYLDKDNN-LYKAAKHLTFAGGKRIRPYLSILTYNLKKDNINEILPAAVSV 67
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ LRRGK + +G + ++L GD L ++AF + K ++
Sbjct: 68 ELIHNYTLIHDDIMDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAFEAIGNIKDEKKAY 127
Query: 132 ALSL---VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ AC ++ T E+YL +IK KT L A+ E+ ++A
Sbjct: 128 KVLKVLSKACVDVCEGQAMDMEFESYWPTLEEYLEMIKKKTGALLEASAEIGGIMAEFNE 187
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+A+KSY +G+ FQ+ DD+LD G+ ++GK +G D R GK T+ +I A +
Sbjct: 188 EEMKAIKSYAEKIGLTFQIQDDILDIIGDEKKIGKPVGSDIREGKKTIIIIHAINTLNEE 247
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
EK S + + K S E++++A I+ ++ + ++A SL D +K
Sbjct: 248 EKEKLLSILGNVK-SEEDIREAIKILE--PSINYAKELLNKLTEEAIKSLEIF-DKYRRK 303
Query: 309 SLMEVVDFCLQRL 321
L E+ F R+
Sbjct: 304 ELEELAKFIANRI 316
>gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Coenzyme Q biosynthesis protein 1;
AltName: Full=Decaprenyl pyrophosphate synthase;
AltName: Full=Trans-prenyltransferase; Short=TPT
gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
Length = 456
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 85/336 (25%), Positives = 156/336 (46%), Gaps = 23/336 (6%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI---------------CSDVEMIPDVVKYLIFSGGKRLR 46
+ + D+ + I+K I ++ + Y GKR+R
Sbjct: 127 NEIFKVVENDLSNMTHNIMKTITDGVSANSTYSPSPSKKTHPILSSISSYYFELKGKRIR 186
Query: 47 PMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105
P + L + L + + LA +E IHTA+L+HDDV+D+++ RR ++ + N+
Sbjct: 187 PTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKL 246
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
++L GD+LL++A ++ ++ + E +S L EGE Q + V+ ++YL
Sbjct: 247 AILCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGEFMQAKSNGV--VSFDNYLQKT 304
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT L + + +++++G +++ +G NLG+AFQ+VDD+LDY G E GK
Sbjct: 305 YLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKAT 364
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D G T PV+ A +E + I + ++++A ++ ++ + T
Sbjct: 365 SVDLTLGLATAPVLYAT-----QEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRN 419
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y +A SL LP S + L+ + + R
Sbjct: 420 LAIEYCNRAIQSLLKLPQSESRDLLITLSHIVVTRT 455
>gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
Length = 324
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 5/301 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ + + + Y++ GGKRLRP+LTL TA + Y + A +IE H +L+HDD++
Sbjct: 23 EPKNLYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEVFHNFSLVHDDIM 82
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE 142
DD+ LRRG+ W T++L GD +L A+ + S+ + S A + E
Sbjct: 83 DDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQLFENYDSKTFQALAKLFSKTALEVCE 142
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ + DVT +YL +I+ KTAVL AA+++ +++A N + + ++G LG
Sbjct: 143 GQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAIVAKASNEDQDGIYNFGRLLG 202
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGK 261
IAFQL DD LD G GK +G D K T + A + EK + + + +
Sbjct: 203 IAFQLQDDYLDAFGNPETFGKQVGGDIIENKKTYLYLKAIENLETSEKKQIEQLFSVNLQ 262
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK-SLMEVVDFCLQR 320
+ + ++ ++ A T+ +Y KA L L S KK L + + + R
Sbjct: 263 DNDDKIETVKEFFVKSEAAKATQAEIENYTNKAFAVLETLNISEEKKTILKQFGNTLMTR 322
Query: 321 L 321
Sbjct: 323 K 323
>gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus]
Length = 418
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 104 RDLKGLYEDIRKELFISTAELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQA 163
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDD++DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 164 SQRAIALIAEMIHTASLVHDDIIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 223
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 224 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 283
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +V + YG N+GIAFQL+DDVLD+ +MGK D + G T PV+ A
Sbjct: 284 LGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFAC 343
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + S ++ +A + ++ + T Y A Y KA + L
Sbjct: 344 QQFPEMNAMIM-----RRFGSPGDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLR 398
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 399 PSPERDALIQLSEMVLTR 416
>gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus]
gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus]
Length = 418
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 104 RDLKGLYEDIRKELFISTAELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQA 163
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDD++DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 164 SQRAIALIAEMIHTASLVHDDIIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 223
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 224 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 283
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +V + YG N+GIAFQL+DDVLD+ +MGK D + G T PV+ A
Sbjct: 284 LGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFAC 343
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + S ++ +A + ++ + T Y A Y KA + L
Sbjct: 344 QQFPEMNAMIM-----RRFGSPGDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLR 398
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 399 PSPERDALIQLSEMVLTR 416
>gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG2H5]
Length = 575
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 153/317 (48%), Gaps = 9/317 (2%)
Query: 13 EKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++V +I+ + E + + +L GGKRLR ++ + D H L +I
Sbjct: 261 KRVEGIIMDSLGKMQQERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGHYTLGASI 320
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D +RRG A + + + T++ GD +L+ F ++ E+ +A +
Sbjct: 321 EIIHNFTLVHDDIIDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEILAESPEIDADK 380
Query: 132 ------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + +AEG+ + + VTEEDY+ +I KT+ +F +++AG
Sbjct: 381 LAFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFETCATTGAILAG 440
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + + +G+NLG+ FQL+DD++D G+ +GK G D GK TL I A G
Sbjct: 441 ASDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTETLGKPAGSDVVQGKRTLIAIHALASG 500
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
G S ++L A ++E+ + RA + A SL L D+
Sbjct: 501 LDLPNFRQ--VYGAGNCSDDDLAAAIRELQESGSTAYARDRAMHHHSLAHRSLELLDDNP 558
Query: 306 WKKSLMEVVDFCLQRLN 322
+ L E+ DF L R+N
Sbjct: 559 AVQVLKELTDFQLIRIN 575
>gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl
diphosphate synthase (SelF-HepPS) [Synechococcus
elongatus]
Length = 324
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 144/317 (45%), Gaps = 10/317 (3%)
Query: 13 EKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ + I + + ++ + V+Y + SGGKRLRP++TL A + +A A
Sbjct: 7 DTIEQAIARALDRTELPPILDEPVRYALASGGKRLRPLITLLAAEACGSSPADAAPVAAA 66
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H TL+HDD++D S LRRG+ W + T++L GD ++ A+ ++ E E
Sbjct: 67 VEILHNFTLIHDDIMDRSPLRRGRPTVYRAWDDATAILAGDTMMGIAYRLLSEHYPAEVC 126
Query: 131 EA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ S + G+ L+ VT +DYL +I KTA LF+ A ++A
Sbjct: 127 QHLVAECSSAFVDVCIGQAEDLAFRTMPSVTMDDYLRMIGRKTARLFATAAVAGGIVARA 186
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ V AL++YG LG+AFQ+ DDVLD G GK +G+D R GK T P + A T
Sbjct: 187 PHDVLAALRTYGTALGMAFQIRDDVLDLFGSPE-FGKELGQDLREGKKTFPTLSAAAHAT 245
Query: 247 KREK--NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPD 303
F E + + R AL E Y A +L LP
Sbjct: 246 DPNDLATFAAYFAGTPPTDSEEIAQMRERCRRLGALEHAESLIAHYLSTANAALESHLPS 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+S + L + R
Sbjct: 306 TSARDRLCALARATRNR 322
>gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
Length = 325
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 6/319 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + + K + + + + Y++ GGKR+RP+L L +A + +N +
Sbjct: 5 IEQYRQSFDDYLQKILQFGEPAGLYEPIGYIMDLGGKRMRPVLVLLSAELFGAPAENALP 64
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E H +L+HDD++D + LRRG+ W T++L GD +L +A+ +
Sbjct: 65 AAAAVEIFHNFSLVHDDIMDAAPLRRGRPTVHRKWDPNTAILSGDAMLIRAYQQLDGYPP 124
Query: 127 QEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ L + T + EG+ + DV +YL +I+ KTAVL AL++ ++I
Sbjct: 125 ELFQPLTRLFSRTALEVCEGQQYDMDFESRDDVGIPEYLRMIEFKTAVLLGCALQMGAII 184
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + + ++A+ +G+ LG+AFQL DD LD G GK +G D K T + A +
Sbjct: 185 GGAEVAEQEAVYDFGIRLGLAFQLQDDYLDVFGNPETFGKQVGGDIIENKKTYLYLQALE 244
Query: 244 RGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
R + + + + + + + I A T + Y ++A L L
Sbjct: 245 RCGADDARELRDLYSVRPTNPQSKVDRVRQIFETCGADRQTRNQIGGYTREAFARLDTLT 304
Query: 303 DSS-WKKSLMEVVDFCLQR 320
+ K +L + ++ L+R
Sbjct: 305 GNPRAKAALRDFGEWLLRR 323
>gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
lyrata]
gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
lyrata]
Length = 865
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 92/307 (29%), Positives = 161/307 (52%), Gaps = 11/307 (3%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFI 74
+ ++ ++ + + +GGKR+RP L + L+ H L IE I
Sbjct: 563 DIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMI 622
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA + ++ + ++ +S
Sbjct: 623 HTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLQVIKLIS 682
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
V A GE++Q S + DV +DYL KTA L +A+ + +++ + V++ V + +
Sbjct: 683 QVIKDFASGEIKQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQM 742
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G NLG++FQ+VDD+LD+ ++GK D G T PVI A + + +
Sbjct: 743 YQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIES 802
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
G L++A I+R + + A G+ A +L CLP S ++ +L ++V
Sbjct: 803 EFCEPGS-----LEEAIEIVRNRGGIKKAQELAKEKGELALKNLNCLPRSGFRSALEDMV 857
Query: 315 DFCLQRL 321
F L+R+
Sbjct: 858 MFNLERI 864
>gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 339
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 8/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66
+ +++V L++ + S +++ + +L +GGKR RPM + ++ G D +
Sbjct: 19 VQESLQRVEDLLISELSSGDDILVEAATHLAKAGGKRFRPMFAILSSHFGAKPGADEVIT 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A IE H ATL HDDV+D++ALRRG +A W N ++L GDFL ++A ++ T
Sbjct: 79 SATVIEMTHLATLYHDDVMDEAALRRGAPSANARWSNSIAILAGDFLFARA-SHLVSTLG 137
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA+ ++ L G++R+ D E YL V+ KT L + A + AG
Sbjct: 138 PEAVRIIADTFAELVTGQMRETVGVSAGDDPIEHYLKVVWEKTGSLIATAGRFGAYTAGA 197
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L G +G AFQ+ DD++D + GK G D R G TLPV+LA +
Sbjct: 198 DETTVDTLARLGDVVGTAFQVSDDIIDIASVTGDSGKTPGTDLREGVHTLPVLLALRGDG 257
Query: 247 KREKNFWKSTINDGKIS------VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ + + +A ++ ++ + + R + +A L
Sbjct: 258 PDAARLTELLVDPATGAPRALTVDAEVDEALHLLVDSNGMKEARARLEAMADEANGLLAG 317
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD + +V + + R+
Sbjct: 318 LPDGPANAAFSSLVRYTVDRV 338
>gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
Length = 334
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 84/336 (25%), Positives = 153/336 (45%), Gaps = 18/336 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +L L K E V + + + D D V Y + +GGKRLRP+LTLATA +
Sbjct: 1 MDVLSKLHAKYGEAVEQALERYLSIDLAPDFRDAVMYQVKTGGKRLRPLLTLATAEAISG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A +E IH +L++DD++D LRRG R +G+ ++L+G +
Sbjct: 61 QWKPALPAAAIVELIHNYSLIYDDIIDRGDLRRGMPTVRKAYGDNAAILIGIWYREAIEE 120
Query: 120 MVIETKSQEALEALSLVACT-----------LAEGELRQLSL--SKNLDVTEEDYLHVIK 166
V++T ++ +VT +DY+ ++
Sbjct: 121 AVLDTPKPTLFAREVAKVIKAIDEGERLDILFEYAGREDPYFVKARWREVTLDDYIKMVS 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT VL AA + +L + A ++G+N G+AFQ++DDVLD G+ + GK IG
Sbjct: 181 LKTGVLIGAAAKWGALSVSDDAEIADAAWNFGLNAGVAFQVIDDVLDIYGDPKKFGKEIG 240
Query: 227 EDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+D + K V + + +++ ++ + +++A ++ A +
Sbjct: 241 KDIKEHKRGNAVVAVGLSKLPPDKRDRLLHILSLQNVGEAEVREAVSLLDSVGAREEALK 300
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A+ Y ++A+ L +P++ +L E++ F L+R
Sbjct: 301 IAHKYREEAERHLARIPNNE---TLRELLYFILERQ 333
>gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
Length = 309
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA +
Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E
Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG
Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT +
Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I G F + + AL T A Q A ++ P S +K+SL+
Sbjct: 241 LAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSIFKESLL 298
Query: 312 EVVDFCLQRLN 322
E+ + R +
Sbjct: 299 ELCSYSTSRQS 309
>gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
Length = 322
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 6/321 (1%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ E + ++ + + ++Y++ GGKRLRP+LTL + +
Sbjct: 2 KTVEQYREAFLDHLNSKLFVKEPRNLYEPMRYILQLGGKRLRPILTLIATDLFDADYHKA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A AIE H +L+HDD++D ++LRRG+ W ++L GD +L +A+ ++ +
Sbjct: 62 LNAAMAIEMFHNFSLVHDDIMDKASLRRGETTVHKKWNTNIAILSGDAMLVKAYQLLDDY 121
Query: 125 KSQEALEALSLVAC---TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S +++ + EG+ + +V+ DYL +I+ KTAVL AAL++
Sbjct: 122 PSDVFSLLTKILSRTALKVCEGQQWDMDFETQTEVSIPDYLQMIRYKTAVLIGAALQMGV 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA + + ++G LG+AFQL DD LD G+ + GK IG D K T+ + A
Sbjct: 182 IIANASPENQMPIYTFGEELGLAFQLQDDYLDAFGDES-FGKRIGGDIIENKKTILYLTA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++++ + S + + + A ++A +L L
Sbjct: 241 LKLADEQQRKTLLQHYATTEDSQQKINTVKALFEATGATTAVRQEIEHTTRRALSTLSEL 300
Query: 302 PDSSWKK-SLMEVVDFCLQRL 321
S K+ L E + R
Sbjct: 301 TISDEKRHYLKEFALKLMDRK 321
>gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
Length = 344
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 23/329 (6%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALML-------------- 57
E+VN I + + D + + +YL+ +GGKRLRP + L A L
Sbjct: 16 EQVNDAIERELPVDEPEELYEASRYLMDAGGKRLRPTMLLLAAESLADVAPQSTDYRSFP 75
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + A IE I + TL+HDD++DD LRRG A + T++L GD L S
Sbjct: 76 TVEGDEIDVMRAAVGIETIQSFTLIHDDIMDDDDLRRGVPAVHREYDLSTAILAGDTLFS 135
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE----EDYLHVIKSKTAV 171
+AF +++T ++ + E+ + + D +
Sbjct: 136 KAFEYMLDTGAKAERSVAATKRLAQTCTEICEGQSFDIDFESRAEVTTDEYLDMVELKTA 195
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ AA + L YG+++G AFQ+ DD+LD ++GK G D
Sbjct: 196 VLYAASASIPAQLMGAEDAVEPLYGYGLDVGRAFQIQDDLLDLTTPSEKLGKQRGSDLVE 255
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T+ + A Q+G E ++ ++ + A + ++ A+
Sbjct: 256 EKQTIVTLHARQQGVDIEGLVETDSVEA--VTESEIDDAVAELEAAGSIEFARETAHDLI 313
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KD L LPD+ ++ L + D+ ++R
Sbjct: 314 ASGKDRLEVLPDNEPRQLLAGIADYLVER 342
>gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan
troglodytes]
Length = 415
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 281 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 341 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 395
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 396 PSPERDALIQLSEIVLTR 413
>gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens]
Length = 414
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 100 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 159
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 160 SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 219
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 220 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 279
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 280 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 339
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 340 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 394
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 395 PSPERDALIQLSEIVLTR 412
>gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
[Equus caballus]
Length = 379
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D++ + I K + + ++ +Y GK RP++ + A DN
Sbjct: 65 RDLKGLYEDIRKELLISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNSHHDNSRDVQA 124
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD+ RRGK +WG + +VL GD +LS A +
Sbjct: 125 SQRSIALIAEMIHTASLVHDDVIDDARSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 184
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 185 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 244
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 245 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 304
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 305 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAVREISKLR 359
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 360 PSPERDALIQLSEIVLTR 377
>gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 447
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 96/372 (25%), Positives = 152/372 (40%), Gaps = 63/372 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV- 65
+ K+++ + I + + S + V KY S GK +RPML L + H
Sbjct: 79 MVGKELKFLTKNIRQLLGSGHPALDKVAKYYTHSEGKHMRPMLVLLMSQATALDPRKHHS 138
Query: 66 --------------------------------------------------LLACAIEFIH 75
LA E IH
Sbjct: 139 YTDKPSPVDSSFSAPSILEDANPEMNPLVAPNADSKYDIAGDDYILPSQRRLAEITELIH 198
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+LLHDDV+D++ RR +A L +GN+ +VL GDF+L +A + + E E ++
Sbjct: 199 TASLLHDDVIDNAVTRRANSSANLAFGNKMAVLAGDFMLGRASVALARLRDPEVTELMAT 258
Query: 136 VAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
V + + S D T YL KTA L S + ++++
Sbjct: 259 VIANLVEGEFMQLKNTAQDESKPVYTDETLSYYLQKTYLKTASLISKSCRSAAVLGRSAP 318
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V +A +YG NLG+AFQLVDD+LDY EMGK +G D G T P++ A++ +
Sbjct: 319 EVIEASYAYGRNLGLAFQLVDDMLDYTVTEAEMGKPVGADLELGLATAPLLFAWKSNPEL 378
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ ++++A ++ + + T A Y KA ++ PDS K
Sbjct: 379 GP-----LVGRKFREEGDVQRARELVYRSDGVEQTRALAREYADKAIAAISDFPDSDAKA 433
Query: 309 SLMEVVDFCLQR 320
SL+E+ + + R
Sbjct: 434 SLIEMCEKTMNR 445
>gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo
abelii]
Length = 415
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 221 RIGNTTVICILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 281 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 341 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIRQISKLR 395
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 396 PSPERDALIQLSETVLTR 413
>gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
Length = 327
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 113/329 (34%), Positives = 183/329 (55%), Gaps = 13/329 (3%)
Query: 1 MKMLED---LTLKD----MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
MK + D ++KVN +I + S+V +I V K++I GGK++RP +
Sbjct: 1 MKTISQKNITLNSDQHDHLQKVNDVIRSSLDSEVPLINQVGKHIIDGGGKKMRPQCLINL 60
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
A + D H LA +EFIHTATLLHDDVVDDS RR A + +GN S+LVGDF+
Sbjct: 61 AGLAGGVKDIHYQLAAIVEFIHTATLLHDDVVDDSDTRRSSPTANIQFGNSASILVGDFI 120
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
S++F M++E + E ++ L+ +AEGE+ QL N D+++++Y VIK+KT VLF
Sbjct: 121 YSRSFQMMVELDNIEIMDILAYTTNKIAEGEVLQLINKNNFDISQDNYFKVIKAKTGVLF 180
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A +++ + + + +L G G +QL+DDVLDY G+V ++GKN+G+D ++GK
Sbjct: 181 EACGKLACIANKCTLNQKTSLSLIGKIFGEIYQLIDDVLDYSGDVAKIGKNLGDDLKDGK 240
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TLP+I A ++ ++ K+ IN G +S L + I+ + ++ + +
Sbjct: 241 MTLPLIFAAEKANINDREIIKNAINHGDLS--QLTRIISIIDKTNSIDSVKKIIK--AKL 296
Query: 294 AKDSLRC--LPDSSWKKSLMEVVDFCLQR 320
A L D+ +K +M + ++R
Sbjct: 297 ADLELEMSYFKDNIYKDRMMTFISSSIKR 325
>gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 394
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 7/322 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + ++ IL + I + +Y++ S GKR+RP+L L +A G
Sbjct: 68 QSLTSQLKDYLAWIDREILNQAEEFDAGIVPLFRYVLASEGKRIRPLLVLLSAKGSGGIG 127
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+NH+ LA +E IH ATL+HDD++D +++RRG + WG++ SVL+GD L +QA +
Sbjct: 128 ENHLYLAVVVEMIHLATLVHDDILDGASMRRGIPSVTSRWGSEISVLLGDNLFAQALKVC 187
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ V + GE+ Q + ++ EE+YL +I+ KT LF E+++
Sbjct: 188 CRLHPDIIQSVANGVCVVCS-GEILQTRRRFDWNLLEEEYLKIIQMKTGELFRIPCELAA 246
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +V +AL +G LG ++Q+ DD LD G +GK +G D GK TLP++
Sbjct: 247 RLNSASRTVSEALGRFGQALGSSYQIYDDCLDLFGSEENVGKTLGTDLGGGKLTLPILYL 306
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+Q+G++ K +G + KK + + L T A S+ +K + L L
Sbjct: 307 YQQGSEEIKRTLVEIFENGVS--ADWKKIQFWIVKEGILKKTFQTAMSFLEKGEKELALL 364
Query: 302 PDSSWKKSLME----VVDFCLQ 319
P+S K L++ + + L+
Sbjct: 365 PESDEKDCLLDVGKILANHLLE 386
>gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 322
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E+ + I + + + Y++ GGKRLRP+LTL A + + A A+
Sbjct: 9 EEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALPAAAAV 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-- 129
E H +L+HDD++D+++LRRGK W + ++L GD +L A+C++
Sbjct: 69 EVFHNFSLVHDDIMDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLLDSYPPDTFAA 128
Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ S A + EG+ + V+ YL +I+ KTAVL AAL++ ++IAG
Sbjct: 129 LAKLFSKTALEVCEGQQWDMDFETQAQVSIPQYLQMIRYKTAVLVGAALQMGAIIAGASI 188
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
++ + +G+ +G+AFQL DD LD G+ GK IG D K T+ + A +
Sbjct: 189 ENQRLIYDFGVTIGLAFQLQDDYLDTFGDEA-FGKKIGGDILENKKTILYLKALDLADEA 247
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++N + + + + + R+ A +A + L + S K+
Sbjct: 248 QRNTLIAQYTTSEENDAKIAIVTQLFRQTGAAEAVRDEITRTTDEALNLLEHITISDEKR 307
Query: 309 S-LMEVVDFCLQRL 321
+ L + + R
Sbjct: 308 AYLKQFALELMNRK 321
>gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium
HF0200_05J13]
Length = 339
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 152/321 (47%), Gaps = 1/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+ + I+ + ++ +L+ GKR+RP+ + A
Sbjct: 17 LIEIRTWLQDDLATLEREIIAPLPEVTDLGQRAAVHLLGLPGKRVRPLCVVLAARAGGAP 76
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ LA A E +H+ATLLHDDV+D+ + RRG VAARL +GN SVL GD+LL A
Sbjct: 77 FNEAVKQLAIACELVHSATLLHDDVLDEGSERRGAVAARLAYGNSASVLGGDYLLVDALR 136
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V +T L L V + + E+ QL D + YL +I KTA +F L
Sbjct: 137 RVYKTGEHGLLSDLMDVIDGMVKAEVAQLERRGKFDADRDAYLEIIYGKTAAIFEWGLRA 196
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ G+ Q L YG +G+AFQ+VDD+LD GE +GK+ D + GK T P+I
Sbjct: 197 GGIAGGLSEEAAQGLGKYGAAIGMAFQVVDDILDLAGESEVIGKDSLVDIKEGKLTWPLI 256
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+A +R E + + K + + AL + RA ++A+ +L
Sbjct: 257 IACEREPSIEVCLREIACTPEALDETYAKSLRQRILDTGALDEARRRARLCAEQAQQALD 316
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+P S + +L V++ + R
Sbjct: 317 SVPASKSRDALSTVIEAVVNR 337
>gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
Length = 323
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 13 EKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ V I K + + + Y+I GGKRLRP++ L M + A AI
Sbjct: 9 QIVADAITKYTFKDKPSELYEPMNYIISHGGKRLRPIMVLMACEMFGGDLKEAIKPALAI 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EF H TL+HDD++D++ LRR K + G +L GD L+ +A+ + + +
Sbjct: 69 EFFHNFTLIHDDIMDEAPLRRNKPTIHTLHGLNVGILSGDGLMLKAYKFFEDLEPEIFKA 128
Query: 132 ALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + T EG+ ++ DVT +DY+ +I KT VL +++ E+ +LIA
Sbjct: 129 CIRIFTHTGLLLCEGQQYDINFETQKDVTFDDYIRMITYKTGVLSASSFEIGALIAKADF 188
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+A+ ++G ++GIAFQ++DD LD G+ + GK D K T+ +LA + T
Sbjct: 189 KDAKAIFNFGKHIGIAFQIMDDYLDVFGDQAQFGKKHAGDIYENKKTVLYLLAREHATDE 248
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWK 307
E+ + +V+ + I R + + + + L+ + K
Sbjct: 249 ERKELDYWYSKKTENVDKVYGVEKIFRRTKVDEKALRLIEKHNEIGQSYLQKIDVPEEKK 308
Query: 308 KSLMEVVDFCLQRLN 322
K +E+ ++ L+R +
Sbjct: 309 KPFIELANYLLRRES 323
>gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens]
gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1; AltName: Full=Trans-prenyltransferase 1;
Short=TPT 1
gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens]
gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens]
gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a
[Homo sapiens]
Length = 415
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 281 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 341 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 395
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 396 PSPERDALIQLSEIVLTR 413
>gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
Length = 334
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/337 (27%), Positives = 166/337 (49%), Gaps = 20/337 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++ L K V + + + D + V Y + +GGKRLRP+LTLATA +
Sbjct: 1 MDVVTKLHKKYGAAVEKALERYLSIDLAPDFREEVLYQVKTGGKRLRPLLTLATAEAVSG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL------ 113
R + V A +E IH +L++DD++D +RRG R +G+ ++L+G +
Sbjct: 61 RWEPAVPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILIGIWYREAIEE 120
Query: 114 --------LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
L+ A + K+ + E L ++ + ++ +VT EDY+H++
Sbjct: 121 AVLDTPKPLAFAKEVAKVIKAIDEGERLDILFEYAGREDPY-FIKARKAEVTLEDYIHMV 179
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT L +AA + ++ + + ++G+ G+AFQ++DDVLD G+ + GK I
Sbjct: 180 SLKTGALIAAAAKWGAMSVSDDGKLAEEAWNFGLKAGVAFQIIDDVLDIYGDPKKFGKEI 239
Query: 226 GEDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D + K V +A R +E+ S ++ +I+ E +K+A +M +A +
Sbjct: 240 GKDIKEHKRGNAVVAIALTRLQPQERRRLLSILSKAEIAEEEVKEAVALMDSVKAREEAL 299
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y ++A+ L +P++ +L E++ F L+R
Sbjct: 300 ALAERYRREAEQHLAEIPNNE---ALRELLAFILERQ 333
>gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950]
Length = 338
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + S E++ + + +L +GGKR RP+ T+ +A +
Sbjct: 17 AFAATVRDGVGRIEQLMDTELRSADEIMTESLTHLFKAGGKRFRPLFTVLSAQLGPNPDA 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V
Sbjct: 77 ADVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV 136
Query: 122 IE--TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + T E R L+ + E YL V+ KTA L +AA
Sbjct: 137 SRLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPIEHYLKVVYEKTACLIAAAGRF 196
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ +G + L G +G AFQ+ DD++D + E GK G D R G TLP++
Sbjct: 197 GAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSRESGKLPGTDVREGVHTLPMV 256
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + + + E + +A ++R + + + Y +A L
Sbjct: 257 YALREPGPDAARLRELLVG-PIDDDETVAEALALLRASEGMAKAKRSLQDYAAQAHQELA 315
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LPD + +L +VD+ + R
Sbjct: 316 LLPDVPGRHALQTLVDYTISR 336
>gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax]
Length = 422
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K L KD++ + I K + E + + Y GK +RP++ + A L
Sbjct: 99 LKDPFTLANKDLQSLFDDIRKELFVTKEELKSLCDYYFDGKGKAIRPIIVILMARALNIH 158
Query: 61 GDNH-------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ LA E IHTA+L+HDDV+D S RRGK +WG + ++L GD +
Sbjct: 159 SNRAGDLLPGQRALAMISEMIHTASLVHDDVIDGSDKRRGKRTINDMWGERKAILAGDLI 218
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
LS A ++ + ++ +S V L GE QL +N + + YL KTA L
Sbjct: 219 LSAASVLLARIGNNAVVKVMSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFKKTASLI 278
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + + S++ V + YG N+GIAFQLVDDVLD+ + +GK D + G
Sbjct: 279 ANSCKAVSILVTSDPEVHEIAYQYGKNVGIAFQLVDDVLDFTSGASHLGKPTAADLKLGL 338
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T PV+ A Q+ + S ++ +A+ + ++ + T Y A Y Q+
Sbjct: 339 ATGPVLFACQQFPELHAMII-----RRFSSKGDVDRAWQYVLQSDGVQQTNYLAQRYCQE 393
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + L S+ + +L+ + + L R
Sbjct: 394 AIRQINRLRPSAERDALIRLTEMVLTR 420
>gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 321
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ L ++++V L+ +R +D + + L+ +GGKR+RP+ L L +
Sbjct: 5 EIYLLYRHELDRVERLLDERAHADHVDLAKAGRTLLEAGGKRIRPLFALICGLGEREWSE 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E IH ATL+HDDV+D + LRRGK R +GN ++ GD+L ++A ++
Sbjct: 65 DVAKIAAALEMIHMATLVHDDVIDRADLRRGKPTVRKSYGNLAAMYTGDYLFARAIQLLA 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + E ++ L EGE+ Q+ N YL I KTA+L S + ++ ++
Sbjct: 125 EVDNLEVHRLMARGIVLLCEGEIEQIEDFYNWSQGVMTYLRRIHRKTALLISLSCQLGAM 184
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G AL +G +G+AFQ+VDD+LD+ G +GK +G D R G TLP +LA
Sbjct: 185 VGGAPEREVAALARFGHAVGMAFQIVDDLLDFTGAAEIVGKPVGGDLRQGNLTLPALLA- 243
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + + E ++A ++ + AL D E A Y +K++ L+ +
Sbjct: 244 --ASRPGFGERLRALVREGMREEEAEEAIRLVVASGALADAERLAERYLEKSRHLLQAVN 301
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ ++ LM + F ++R
Sbjct: 302 RETVREQLMGLTSFIIRRQ 320
>gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3]
gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Chlorobium chlorochromatii CaD3]
Length = 331
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 4/311 (1%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++N + + +Y++ GKR+RP LTL + D+ + +A A+E
Sbjct: 19 RINNALTACFSKQTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVE 78
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-- 130
+H TL+HDD++D + LR G+ W ++L GD +++ A+ + +++K
Sbjct: 79 ILHNFTLIHDDIMDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYELALQSKGSRQTEL 138
Query: 131 -EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L+ T+ EG+ + L + D + DYL +I KT L SAALE + +
Sbjct: 139 VHILNDANITICEGQALDMELEEMPDASMSDYLDMIAKKTGRLISAALEAGGVAGNATDE 198
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++L +G +G AFQ+ DD LD E + GK G D NGK T ++ + + + +
Sbjct: 199 QLRSLVLFGEKIGQAFQIQDDYLDIMAEAGKSGKMAGGDIINGKKTCLLLRSIELSSGTD 258
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
++ S I + IS E + + I + L + S ++A ++ LP + +
Sbjct: 259 RDLLLSIIANKGISAERVGEVKAIYQRCGVLDEIAALINSATEEALSAVDNLPYAEGRDH 318
Query: 310 LMEVVDFCLQR 320
L + ++R
Sbjct: 319 LKGFANILMKR 329
>gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG1C9]
Length = 575
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 9/316 (2%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+V +I+ + E + + +L GGKRLR ++ + D H L +IE
Sbjct: 262 QVEGIIMDSLGKMQQERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGHYTLGASIE 321
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE- 131
IH TL+HDD++D +RRG A + + + T++ GD +L+ F ++ E+ +A +
Sbjct: 322 IIHNFTLVHDDIIDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEILAESPEIDADKL 381
Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + +AEG+ + + VTEEDY+ +I KT+ +F +++AG
Sbjct: 382 AFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFETCATTGAILAGA 441
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + +G+NLG+ FQL+DD++D G+ +GK G D GK TL I A +
Sbjct: 442 SDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTETLGKPAGSDVVQGKRTLIAIHAL--AS 499
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++ G S ++L A ++E+ + RA + A SL L D+
Sbjct: 500 DLDLPNFRQVYGAGNCSDDDLAAAIRELQESGSTAYARDRAMHHHSLAHRSLELLDDNPA 559
Query: 307 KKSLMEVVDFCLQRLN 322
+ L E+ DF L R+N
Sbjct: 560 VQVLKELTDFQLIRIN 575
>gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
Length = 529
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 36/347 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---------------VEMIPDVVKYLIFSGGKRLRP 47
+ L +D+ ++ I+ + + ++ + Y GKR+RP
Sbjct: 190 DIYKLVDQDLNQMTKNIIDTVTNGISGSGEHAGGPSKLTHPVLKSIAAYYFDLKGKRIRP 249
Query: 48 MLTLATALMLEY-------------RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
+ L A L + LA +E IHTA+L+HDDV+DD+ RR
Sbjct: 250 TILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLVHDDVIDDADTRRDV 309
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ + N+ ++L GDFLLS+A ++ K+ E E +S V L EGE Q+ S +
Sbjct: 310 PSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMSTVISDLVEGEFMQIKASGSS 369
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
KTA L + + +++++G V +G NLG+AFQ+VDD+LD+
Sbjct: 370 FDIYI---RKTYLKTASLIANSCRSTAILSGSDRQVIDIATDFGKNLGLAFQIVDDLLDF 426
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+GK D G T PV+ A Q + E I ++ +A ++
Sbjct: 427 TSSTESLGKPASVDLSLGLATAPVLFAAQEFPELET-----LIERKFSMPGDVDEARRLV 481
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + T A Y KA SL LP S + L+ + + R
Sbjct: 482 FQSNGIEKTRSLAIDYCNKAIQSLMLLPPSEPRDLLITLTHTVVTRK 528
>gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 330
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 132/299 (44%), Positives = 186/299 (62%), Gaps = 2/299 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DL DM +V+ +I +R+ + V ++ V +Y+I +GGKRLRP L L + L Y G+
Sbjct: 16 DLIAGDMVEVDRVIARRLDTGVPLVSQVSQYIISAGGKRLRPALLLLMSGALGYTGEQRF 75
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++
Sbjct: 76 NLAAVVEFIHTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDAN 135
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG
Sbjct: 136 NIRVMEILAEATNVIAEGEVLQLMNMHDASLDETAYLRVIRSKTAKLFEASTRLAAVLAG 195
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A QRG
Sbjct: 196 VTPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMQRG 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
T + ++ I G L K I+RE AL + A + ++A D+LR P +
Sbjct: 256 TPEQSGLVRAAIEAG--DTAQLGKVVEIVRETGALDASRAAAAAEAKRAIDALRDFPSN 312
>gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes HCC23]
gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes HCC23]
gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes L99]
Length = 321
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KPAEDIATAYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136]
Length = 336
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 2/312 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+L ++E+V L++++ + + + Y+ + GKR+RP L + H
Sbjct: 16 ELVKPEIERVEELLMEQARAFDPNVEGYISYVCNTSGKRIRPALAVLAGGATGGVTHEHR 75
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
L+ +E IH A+L+HDD++D + +RR A WGN SVL+GD L + A + +
Sbjct: 76 QLSIILEMIHIASLVHDDIMDGATIRREMPTAAAKWGNALSVLLGDSLFAYALELATQFD 135
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
++ + +A GE+ Q + ++ E+Y +I+ KTA LF++A E+ + + G
Sbjct: 136 ESSICRKIARASRDVACGEILQTQRRFDFTLSMEEYFKIIEMKTAALFASATELGARLNG 195
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+SV ++ +YG LG A+Q+ DD +D G+ E+GK +G D GK TLP++ +
Sbjct: 196 CSDSVVASMYNYGNRLGTAYQIYDDCIDLVGDEKEIGKTLGTDLAKGKLTLPMLFLLRDA 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T ++ + G+ + I A+ A ++A+ L CL S
Sbjct: 256 TDAQRTKLHRMVLKGEPMDTTI--LAGIADYAGAIEHAVNTAKDMLEEARKDLVCLDASP 313
Query: 306 WKKSLMEVVDFC 317
K++L+ + +
Sbjct: 314 HKEALVTITQYL 325
>gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium
dendrobatidis JAM81]
Length = 356
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 89/347 (25%), Positives = 147/347 (42%), Gaps = 36/347 (10%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61
+L D+ + I K + S ++ + Y GK +RP++ L A
Sbjct: 14 NLLGGDLSLLTENIRKLLGSGHPVLNTISSYYFSKQGKHIRPLVVLLMAQATSITAKMPG 73
Query: 62 ------------------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
LA E IHTA+LLHDDV+D S RR + +GN
Sbjct: 74 SDPFTNSGATILPEAVILPTQRRLAEITEMIHTASLLHDDVIDISMTRRNTPSVNAEFGN 133
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ---------LSLSKNL 154
+ ++L GDFLL++A + + +E LS V L EGE Q S +
Sbjct: 134 KMAILAGDFLLARASVALARLRDPRVVELLSTVISNLVEGEFMQLRNSALGGSKSAYSAV 193
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ Y+ KTA L + + S+++ G + V ++ YG NLG+AFQLVDD++D+
Sbjct: 194 HDRFQYYMEKTYMKTASLIAISCRSSAVLGGCTDDVIESAYLYGRNLGLAFQLVDDMMDF 253
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ GK + D + G T PV+ A + I + + A ++
Sbjct: 254 TVSSADFGKPVNIDLKLGLATAPVLYA-----AAKFPELYPLIERKFEKKGDAELALKLV 308
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
E+ + T A +Y Q+A ++ P S + +L+++ + R
Sbjct: 309 HESNGVAQTRDLARAYCQEAISAISAFPPSLAQTALIQLTQAVITRK 355
>gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
43049]
gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
43049]
Length = 346
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 24/341 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEY 59
+ +ED + ++VN + + + + + + +YL+ +GGKRLRP + L A +L+
Sbjct: 6 QQVEDAIVARRDRVNDALPEDLPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAESLLDV 65
Query: 60 RG---------------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ + A AIE I T TL+HDD++DD ALRRG A +
Sbjct: 66 DPLTADYRDFPTLEGGQADMMSAALAIEVIQTFTLIHDDIMDDDALRRGVPAVHKEYDLS 125
Query: 105 TSVLVGDFLLSQAFCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
T++L GD L S+AF ++ +A + L+ + EG+ + + VT E
Sbjct: 126 TAILAGDTLYSKAFEFLLETGAAHERTVDANKRLATTCTRICEGQSLDIEFEQRDVVTPE 185
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+YL +++ KTAVL+ AA + + + G AL +YG+++G AFQ+ DD+LD
Sbjct: 186 EYLEMVELKTAVLYGAAASIPATLLGADEQTVDALYNYGLDVGRAFQIQDDLLDLTTPSE 245
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
++GK G D K TL + A Q+G ++ +S + A +RE +
Sbjct: 246 KLGKQRGSDLVENKQTLVTLHARQQGVDVGDLVDTDSVEA--VSEAEIDDAVERLREVGS 303
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ K +L LPD+ + L + ++ ++R
Sbjct: 304 IEYARQTGQDLIASGKQNLEVLPDNEARYLLEGIANYLVER 344
>gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 334
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 5/323 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + + +V + + S + ++L+ +GGKR+RP L L TA + D
Sbjct: 12 ALERVVADGLVEVERRLAAAVSSTEILADAPSRHLVNAGGKRMRPALALLTAQLGSGTSD 71
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E H ATL HDDV+D + RRG +A VWGN ++L GD L ++A +V
Sbjct: 72 AVLEAAVAVELTHLATLYHDDVMDSAPTRRGAPSAHEVWGNSVAILTGDLLFARASRLVS 131
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L G+L + ++ + E YL V+ KT L +A+ + ++
Sbjct: 132 ELGPDAVRVQAETFER-LCLGQLHETIGPQDGEDAVEHYLDVLAGKTGSLIAASAQYGAM 190
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP----V 238
+GV + YG +G+AFQL DDV+D + + GK G D R G T+P
Sbjct: 191 FSGVGADALGTVVRYGEKVGVAFQLADDVIDLLSDADVTGKTPGTDLREGVATMPVLLLR 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A + ++ L +R + L + A ++ A L
Sbjct: 251 ARADRGAVDDAGRAVLERLDGDLSDDAALDAVLAELRAHDVLDEARDLARAWAADAVAEL 310
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
LPDS K++L + RL
Sbjct: 311 DGLPDSPVKRALAVFASLVVDRL 333
>gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus
leucogenys]
Length = 397
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 83 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 142
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 143 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 202
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N YL KTA L + + + S+
Sbjct: 203 RIGNTTVISILTQVIEDLVRGEFLQLGSKENESERFAHYLEKTFKKTASLIANSCKAVSV 262
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 263 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 322
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 323 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 377
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 378 PSPERDALIQLSEIVLTR 395
>gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
Length = 329
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 3/322 (0%)
Query: 3 MLEDLTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + M+ + + + +V +L +GGKRLRP+L L A +
Sbjct: 9 ALTTRLERGMDASEEQLRALATEARDPWVAEVAGHLFGNGGKRLRPLLALVGAEFGDRDP 68
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A E +H A+L HDDV+D + RRG + WGN T+VL G++LLS+A +
Sbjct: 69 SAAVRAATLAELVHVASLYHDDVMDQARTRRGVPSVNARWGNTTAVLAGNWLLSKAAQLA 128
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + + L G++R+L + D Y V+ K+A L + AL++ +
Sbjct: 129 AELGPEAIRLQSKVTNR-LIMGQIRELVGPSDDDDPLSHYFTVVAGKSASLIAMALQLGA 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G QAL YG +LGIAFQ+ DD+LD GK G+D G +LPV+LA
Sbjct: 188 VRTGAPEPAVQALAEYGEHLGIAFQISDDILDITSTSEVSGKEQGKDLAIGVASLPVLLA 247
Query: 242 FQRGTKREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L +A ++ AL + ++ +A+ ++
Sbjct: 248 LADERPEAGELRTLLTAAAAGPEGAGLPRAVALLHRCGALAEARTVMHARLLRARTAVNG 307
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LPD + L + DF +R +
Sbjct: 308 LPDGPATRVLHALCDFVARRDH 329
>gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
Length = 345
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 126/299 (42%), Positives = 181/299 (60%), Gaps = 2/299 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DL DM +V+ +I +R+ + V ++ V KY+I +GGKRLRP L L + L Y G+
Sbjct: 31 DLIAGDMVEVDRVIAQRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRF 90
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++
Sbjct: 91 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDAN 150
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG
Sbjct: 151 NMRIMQILAEATNVIAEGEVLQLMNMHDATLDESAYLRVIRSKTAKLFEASTRLAAVLAG 210
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A +RG
Sbjct: 211 ATPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMRRG 270
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++ I G L K I+ AL + A ++A +LR P +
Sbjct: 271 SPAQATLVRAAIEAG--DTAQLGKIVEIVHATGALEASRAAAADEAKRAIHALRDFPSN 327
>gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980]
gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980]
Length = 328
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
K++ + + + + + + +K I +GGK LRP L + E D +
Sbjct: 13 LSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
LA +IE +HTATL+HDD+VD++ LRRG+ R +GN SV GD+L F + +
Sbjct: 73 LAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYST 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S + GEL Q+ N +++ ++YL I KTA LF + V + +G
Sbjct: 133 SLKSLQLNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+++G+AFQ++DD+LDY E E+GK + ED R G +LP
Sbjct: 193 TSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLP---LIYSL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K +++ +++ E+++ I+ + + + A +Y +KA ++ LPD+S
Sbjct: 250 QKNKQSLLPYLEKKTEMTEEDVEAVRKIVERTGGVGEAKKLAAAYTEKALKEIKKLPDTS 309
Query: 306 --WKKSLMEVVDFCLQRL 321
+++L + L R
Sbjct: 310 LRTRENLFSLTQLILDRK 327
>gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii
ATCC 12478]
Length = 335
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ L+ + S ++ D + +L +GGKR RP+ T+ +A + + + ++
Sbjct: 22 VRAGVARIEQLMDTELRSADVVMIDSLLHLFKAGGKRFRPLFTVLSAQVGPDPEAEEVII 81
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+E IH ATL HDDV+D++ +RRG +A WGN ++L GD+LL+ A +V
Sbjct: 82 AGAVVELIHLATLYHDDVMDEAEVRRGAPSANARWGNNVAILAGDYLLATASRLVSRLGP 141
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L G++R+ + E YL V+ KT L AA ++ +G
Sbjct: 142 AAVRIVADT-FAALVTGQMRETRGAPEGADLIEQYLTVVHEKTGSLIGAAGRFGAMFSGA 200
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L G +G AFQ+ DD++D E +E GK G D R G TLP++ A +
Sbjct: 201 DGDQVERLSRLGGIVGTAFQIADDIIDIDSESDESGKVPGTDLREGVRTLPMLYALRDTG 260
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + +A ++R + + + Y +A+D L LPD +
Sbjct: 261 PDGARLRALLAG-PIHDDDAVLEALALLRASPGMAKAKDVLAKYAAQARDELDLLPDVAG 319
Query: 307 KKSLMEVVDFCLQR 320
+++L +VD+ + R
Sbjct: 320 RRALAALVDYTVSR 333
>gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
Length = 324
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 90/326 (27%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + + T +E +N + + + + + + Y++ GGKRLRP+LTL + E
Sbjct: 1 MHSIPEYTSIFLEYLNKH---ALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A A+E H +L+HDD++DD+ LRRG+ W T +L GD +L +A+ +
Sbjct: 58 YKDALDAALAVEIFHNFSLVHDDIMDDAPLRRGEETVHEKWDINTGILSGDAMLIRAYQL 117
Query: 121 VIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + S A + EG+ + DVT +Y+ +I+ KTAVL AAL
Sbjct: 118 FENYEGATFKELAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAAL 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ +++AG S ++ + +YG +LG+AFQL DD LD G+ GK +G D K T
Sbjct: 178 KMGAIVAGASKSCQEGIYNYGRDLGLAFQLQDDYLDAFGDPESFGKQVGGDIIENKKTFL 237
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A K + + + + ++ ++ A TE Y QKA
Sbjct: 238 YLTALANSNKDDAQQLEHFFSISPADPTDKIETVKQQFLDSGAAKATEEEIAKYTQKAFT 297
Query: 297 SLRCLPDSSW-KKSLMEVVDFCLQRL 321
+L + S K++L ++R
Sbjct: 298 ALDNVDISEDKKETLRLFGQGLMKRT 323
>gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex]
Length = 391
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 153/322 (47%), Gaps = 13/322 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------ 61
+D+ + I + + + + +Y GK +RP++TL A + Y
Sbjct: 74 IRRDLTGLYDDIRELLSKTQATLVPIAQYYFDGKGKAIRPVITLLMAKAINYHLGENSRN 133
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + +A +E IHTA+L+HDDVVD + RR K + VWG + S+L G++++ ++
Sbjct: 134 VVEKQMKIAQIVEMIHTASLVHDDVVDAADSRRNKSSVNKVWGQKKSILAGNYVVGRSIE 193
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ +S E L ++ + L GEL QL + N + + YL KTA L + +
Sbjct: 194 ICTAIESHEVLNLITKIFSELISGELMQLDGTANKEEWFDHYLEKTFKKTASLIANGCQA 253
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S++AG ++ + +G LG+AFQLVDD+LD+ ++GK D R G T PV+
Sbjct: 254 VSVVAGASSATQTNAFQFGRQLGMAFQLVDDLLDFVSTSAQLGKPAAADLRLGLATAPVL 313
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A ++ + I +++ AF ++ + L T+ A Y A L
Sbjct: 314 YAARKFPELNV-----LILRRFKEPGDVETAFDLVLRSDGLQRTKELAGQYCDDAVTQLA 368
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L S ++++L + L R+
Sbjct: 369 QLSPSPYQQALFTLTHELLNRM 390
>gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1
[Macaca mulatta]
Length = 415
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 281 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 341 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 395
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 396 PSPERDALIQLSEIVLTR 413
>gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 1816]
Length = 302
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 140/302 (46%), Gaps = 5/302 (1%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATL 79
K I + + VK LI +GGK LRP L +A +Y + V +A A+E +H ATL
Sbjct: 2 KNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATL 61
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVAC 138
+HDDVVDDS LRRG +G +V GD+L F + S E +E S
Sbjct: 62 IHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIE 121
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
+ GEL Q+ S ++VT +YL I KTA LF+ + + + + G
Sbjct: 122 KILMGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIG 181
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LG+AFQ++DDVLDY +GK + D + G +LP+I A + F
Sbjct: 182 HYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK---GHLAEFEPLLSQ 238
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
++ E ++ ++ + + + A Y KA ++ LP +++ + + L
Sbjct: 239 KLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGAYRDDMYRLTKNIL 298
Query: 319 QR 320
R
Sbjct: 299 DR 300
>gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 337
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--- 60
LE +E V + + S +++ ++ +L +GGKRLRP+LTL A +
Sbjct: 13 LESRISPGLEAVERQLAGAVSSSRDLVDELTAHLSAAGGKRLRPLLTLVCAQLGRPELAL 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ + A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A +
Sbjct: 73 GERVITGATAVELTHLASLYHDDVMDSAPTRRGVPSAQRLWGNNRAILAGDVLFARASAL 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + L G+L + + E YL V+ KT L S+A
Sbjct: 133 VAALGPEMVTRHAVTFER-LCTGQLNETFGPAPGEDPVEFYLRVLADKTGSLVSSAAAFG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--- 237
+L++ V + +G +G+AFQ+ DDVLD + GK G D R G TLP
Sbjct: 192 ALLSDAGAFVGDVVAEFGERVGVAFQIADDVLDLASSGGQSGKTPGTDLREGVDTLPVLL 251
Query: 238 -VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ G + S E L ++R + L +T A ++ A D
Sbjct: 252 LRRREAEGGLDDAGRRILEGLGSDLSSDEALGDVVSMLRVHDVLDETRSLARAWAAGAID 311
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L LP K +L+ + RL
Sbjct: 312 CLEALPKGEPKTALVAFAHLMVDRL 336
>gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
Length = 328
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
K++ + + + + + + +K I +GGK LRP L + E D +
Sbjct: 13 LSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
LA +IE +HTATL+HDD+VD++ LRRG+ R +GN SV GD+L F + +
Sbjct: 73 LAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYST 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S + GEL Q+ N +++ ++YL I KTA LF + V + +G
Sbjct: 133 SLKSLQLNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+++G+AFQ++DD+LDY E E+GK + ED R G +LP
Sbjct: 193 TSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLP---LIYSL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K +++ +++ E+++ I+ + + + A +Y +KA ++ LPD+S
Sbjct: 250 QKNKQSLLPYLEKKTEMTEEDIEAVRKIVERTGGVGEAKKLAAAYTEKALKEIKKLPDTS 309
Query: 306 --WKKSLMEVVDFCLQRL 321
+++L + L R
Sbjct: 310 LRTRENLFSLTQLILDRK 327
>gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
TX1330]
gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
TX1330]
gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
Length = 328
Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
K++ + + + + + + +K I +GGK LRP L + E D +
Sbjct: 13 LSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
LA +IE +HTATL+HDD+VD++ LRRG+ R +GN SV GD+L F + +
Sbjct: 73 LAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYST 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S + GEL Q+ N +++ ++YL I KTA LF + V + +G
Sbjct: 133 SLKSLQLNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+++G+AFQ++DD+LDY E E+GK + ED R G +LP
Sbjct: 193 TSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLP---LIYSL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K +++ K++ E+++ I+ + + + A +Y +KA ++ LPD+S
Sbjct: 250 QKNKQSLLPYLEKKTKMTEEDIEAVRKIVERTGGVGEAKKLAAAYTEKALKEIKKLPDTS 309
Query: 306 --WKKSLMEVVDFCLQRL 321
+++L + L R
Sbjct: 310 LRTRENLFSLTQLILDRK 327
>gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens]
Length = 415
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD + RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRAIALIAEMIHTASLVHDDVIDDVSSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG ++GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 281 LGCPDPVVHEIAYQYGKDVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 341 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLR 395
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 396 PSPERDALIQLSEIVLTR 413
>gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 11/324 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ L ++ +N D + + + + Y++ GGKR+RP+L L + +
Sbjct: 5 SDLKSLVNNYLKSLNE------KKDPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDDL 58
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-- 119
+ + ACAIE H TLLHDD++D S LRR K VW T++L GD +L ++
Sbjct: 59 EKTLPAACAIEVYHNFTLLHDDLMDKSDLRRNKPTVHNVWNANTAILSGDAMLILSYHLL 118
Query: 120 -MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ L + V + EG+ + V EDYL +I+ KTAVL +++++
Sbjct: 119 AKAPQENLSAVLNEFNKVTLEICEGQQYDIEFETKNSVKAEDYLDMIRLKTAVLLASSIK 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++IAG + L +G+N+G+AFQL DD LD G+ GK G+D + K T +
Sbjct: 179 MGAIIAGASDEDTNLLYDFGLNVGLAFQLQDDYLDVYGDPKVFGKQTGDDIVSNKKTYML 238
Query: 239 ILAFQRGT-KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A R T K +++ S + +K I E + + Y KA +S
Sbjct: 239 IQACNRATGKVKEDLEIWIDTKEFNSEKKIKAITEIYNELGIDEICKQKMNEYYDKALNS 298
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQR 320
L + S KK L ++ + R
Sbjct: 299 LSLVSVSDDKKKLLQDLAAKLMIR 322
>gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
Length = 321
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 7/318 (2%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ +N L+ +R+ + +LI GGKR RP + + + L + + + A
Sbjct: 3 ASEAAAINALLRQRLRGRPSRLYAAAAHLIEHGGKRFRPYMLIKSCQALGGKKSDAMPAA 62
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
AIE IH TLLHDD++D+ ++R G +G ++L GD L S+A+ ++ + E
Sbjct: 63 TAIEMIHNFTLLHDDIMDNDSIRHGVPTVHKKFGVPVAILAGDVLFSKAYQVISGPRVPE 122
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
A A ++ + L T +Y+ +I KTA LF AA + ++
Sbjct: 123 KRAARLTSRLAAACVDVCEGQLYDMDMAEGAKLPTRSEYIMMIGKKTASLFGAACAMGAI 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G + ++G LG+AFQ+ DD++ G+ K +G D R GK +LPV++A
Sbjct: 183 CSGADEKDARRFAAFGTGLGVAFQITDDLIGITGDPKVTKKPVGNDIREGKKSLPVLMAL 242
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ +++ ++ + + + L+ A ++ D A SY +KA +L P
Sbjct: 243 KKARGKDRAAIRAAFGNARATSVQLRAAVSAVKSLGIEDDVRREAGSYAKKASSALDRYP 302
Query: 303 DSSWKKSLMEVVDFCLQR 320
+ L+ ++D + R
Sbjct: 303 -GRHRDDLLSLLDCVVWR 319
>gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase) [Haloquadratum walsbyi DSM
16790]
gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Haloquadratum walsbyi DSM
16790]
Length = 348
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 31/338 (9%)
Query: 12 MEKVNF---LILKRICSDVE-----MIPDVVKYLIFSGGKRLRPMLTLATAL-------- 55
+E V L+ + +DV + + +YL+ +GGKRLRP + L TA
Sbjct: 11 LEAVRARRTLVNDALDTDVPMQSPERLYEATRYLLEAGGKRLRPTVALLTAESLADVDPL 70
Query: 56 --------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
L+ + + A +IE I + TL+HDD++DD LRRG A + +T++
Sbjct: 71 TADYRSFPALDGSEVDVMSAATSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDTETAI 130
Query: 108 LVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
L GD L ++AF ++ T + A L+ + EG+ + V E+YL
Sbjct: 131 LAGDTLYAKAFELLSNTGADPANGVAAVSRLATTCTQICEGQALDVEFEHRDAVLPEEYL 190
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+++ KTAVL+ AA ++L+ V AL YG++ G AFQ+ DDVLD ++G
Sbjct: 191 EMVELKTAVLYGAATSTTALLLDADADVVDALYQYGIDAGRAFQIQDDVLDLTVPSEQLG 250
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G D K TL + A Q+G E + I+ +S ++ A + E ++
Sbjct: 251 KQRGSDLIENKETLITLHARQQGIDVESLLESTDIDA--VSEAAVENAVATLDEAGSIEY 308
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A ++AK+ L LPD+ + L ++ D+ + R
Sbjct: 309 ASNTATDLVERAKNHLEVLPDNDARSLLCDIADYLITR 346
>gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior]
Length = 337
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 87/323 (26%), Positives = 152/323 (47%), Gaps = 13/323 (4%)
Query: 7 LTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
L D++ + I R+ + +E + + Y GK +RPM T+ A + Y
Sbjct: 19 LVEDDLKDIFVDIRTRLIKNTSLEELQPISTYYFDGQGKAVRPMFTILMARAINYHKGRN 78
Query: 64 -----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A E IH A+LLHDDV+D S RRGK + ++W + + G+++LS A
Sbjct: 79 DLLYSQRQIAMISEMIHNASLLHDDVIDQSDFRRGKPSVNVLWSQKKVAMAGNYILSIAC 138
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M+ E S + ++S + L +GE QL + + YL KTA L + ++
Sbjct: 139 MMLSEIHSDDVTISISQLISDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCMK 198
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++++ V + YG N+G+AFQLVDD+LD+ MGK D + G T PV
Sbjct: 199 GVAILSNVDERTIEMAFQYGRNVGLAFQLVDDLLDFVASTTAMGKPTAADLKLGLATAPV 258
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A +R + + +++KAF ++ ++ L T + A + +A
Sbjct: 259 LFACERYPELNAMIMRRFQEPR-----DVEKAFELVHKSNGLEQTRFLAKKHCAEASKIA 313
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ S ++K+L+ + D + R+
Sbjct: 314 QSFTKSPYQKALIIMADLVINRM 336
>gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
RC-I]
gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
RC-I]
Length = 340
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 21/324 (6%)
Query: 16 NFLILKRICS--DVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGD 62
N I + + S V ++ D++ Y + GGK+LR + L + + D
Sbjct: 17 NQEIKRILDSRRKVGLLGDMMMYHLGWRDEELNPCEAKGGKQLRSTMCLLACEAISGKFD 76
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--- 119
N + A A+E +H +L+HDD+ D RR + +WG ++ GD + ++
Sbjct: 77 NALPGAAAVELVHNFSLIHDDIEDGDETRRHRPTVWKLWGVPQAINTGDAMDVVSYIAIL 136
Query: 120 --MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
V + L + L EG+ + VT E+Y+ +I KTA L A+
Sbjct: 137 ELKVKPETMIKVLRVFNDTIMQLCEGQYLDMDFQTRKTVTVEEYIEMITGKTAALIEAST 196
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ A V K++G +GI FQ+ DD+L G+ ++ GK+ D RN K TLP
Sbjct: 197 AIGAMAATDDQKVIDHFKAFGHKIGIGFQIQDDLLGIWGDPSKTGKSARNDIRNKKKTLP 256
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A Q ++K K + S ++ + F I+ E A T A+ Y +A
Sbjct: 257 VLYALQYS--KQKEELKQLYAKEQFSEADIDRVFQILTEAGAYEYTMKTAHRYRDEALAE 314
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L P S L+ + F + R
Sbjct: 315 LEGLCPGSRAMDDLIAIGRFLVDR 338
>gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
Length = 321
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++E V L+ + ++I +K +I S GK +RP ++ A EY + +L
Sbjct: 11 IKKELEVVIDLMDENAYCKDKVIESSIKDMIHSNGKMIRPGFSIIAAKFGEYEEERTRVL 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +EF H ATL+HDDV+DD+ LRRGK + +G +V +GD+L F ++ T S
Sbjct: 71 AAVMEFFHMATLVHDDVIDDAKLRRGKETVQSKYGKDYAVYIGDYLFCICFKLLASTASL 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++++ S + GE+ QL+ + +V+ ++YL + KTA LFS +L + + +
Sbjct: 131 QSIQIDSKAMSRICLGEVEQLNSRFDKNVSVKNYLKRVSGKTAELFSLSLYIGAAESNCD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + + G N+G+AFQ++DD+LDY + N +GK+ D ++G TLP+I +
Sbjct: 191 KKLSRLFWNIGHNIGMAFQIIDDILDYVSDTNTLGKDSANDLKDGLYTLPLIYV----LE 246
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ + ++ E++ F + E + A Y KA + LPD+ +K
Sbjct: 247 KQPKELLTILDKEIYEDEDIAAIFKLTHELGGIESARNLAKKYTDKAYKLIGQLPDNEYK 306
Query: 308 KSLMEVVDFCLQR 320
L E+ L+R
Sbjct: 307 SMLKEMSRVLLER 319
>gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 335
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 84/313 (26%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
Query: 14 KVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++N + + + + + + + Y++ GKR+RP+L L A + D+ + LA ++E
Sbjct: 23 RINEELQQCLLGKEPKSLYEPATYILTGKGKRVRPVLVLLGAESICGTSDHALNLALSVE 82
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H TL+HDD++D++ALR G+ L W ++L GD +L+ A+ + ++T S +
Sbjct: 83 VLHNFTLIHDDIMDNAALRHGRETVHLKWNENAAILSGDMMLAFAYELALKTNSSRLTKI 142
Query: 133 ---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++ + EG+ + K DVT +YL +I KT L +A+LE+ L A +
Sbjct: 143 LDVITQSTIVICEGQTYDMDFEKRTDVTMSEYLDMISKKTGRLIAASLELGGLAAEATDE 202
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
L YG +G AFQ+ DD+LD + + GK G D GK T ++ A + T +
Sbjct: 203 QLAILTEYGELIGQAFQVQDDLLDIMADDKKFGKVPGGDLMEGKKTFLLLRALELTTGED 262
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+S I++ I+ E + + I L + + S +KA LP+ + +++
Sbjct: 263 HLLLQSVIDNHGIAQERIPEIKDIYERCGILNEAQELINSNFEKAVTLSEKLPNEAGREA 322
Query: 310 LMEVVDFCLQRLN 322
L+ ++R +
Sbjct: 323 LVGFTAMVMKRDS 335
>gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a]
gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Frankia alni ACN14a]
Length = 296
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 5/296 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + ++L+ +GGKR RP++ L A + V A AIE H +TL HDDV+D++
Sbjct: 1 MTETSRHLVDAGGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDVMDEAP 60
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
RRG +A W N ++L GD+L ++A + + TL EG++R+
Sbjct: 61 RRRGAASANARWTNTVAILTGDYLFARASDITADLGPAATRILART-IATLCEGQIRETV 119
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
E YL V+ KTA L + + + +++AG L ++G G+AFQL D
Sbjct: 120 GPAPDQDPVEHYLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFGELFGVAFQLSD 179
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND----GKISVE 265
D++D + + GK G D R G PTLPV+ A Q + + +D G E
Sbjct: 180 DIIDVASDPADSGKTPGTDLREGIPTLPVLYALQADDRPAARLRELINSDFAAGGGNPEE 239
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +A ++R + + ++ +A++ L L D+ K +L + DF + R
Sbjct: 240 GVAEAIELLRAHEGMARARQELVTWSTRARECLAPLSDNGAKAALESLADFVIDRT 295
>gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus]
Length = 337
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 13/323 (4%)
Query: 7 LTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---- 60
L D++ + I + ++ E + + Y + GK +RP+LT+ A + Y
Sbjct: 19 LAEDDLKDMFDDIRLELITNTTQEELQPISTYYLDGQGKAIRPILTILMARAINYHKGRN 78
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A E IH+++LLHDDV+D S +RRGK + +VW + + GD++L+ A
Sbjct: 79 VLSHSQRQIAMISEMIHSSSLLHDDVIDQSDIRRGKPSVNVVWSQKKVAMAGDYILAVAC 138
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M+ ++ E +S + L +GE QL + + YL KTA L + +
Sbjct: 139 RMLSRLQNDEVTITISQIVTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCSK 198
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++A V + + + YG N+G+AFQLVDD+LD+ +GK D + G T PV
Sbjct: 199 AVAILAEVDDHMIEMAFQYGRNVGLAFQLVDDLLDFVASSEALGKPTAADLKLGLATAPV 258
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A +R + + G ++K+AF ++ ++ L T + A + +A +
Sbjct: 259 LFACERYPELNAMIMRRFQEHG-----DVKRAFELVHKSNGLEQTRFLAKKHCAEANKIV 313
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ S ++K+L+ + D + R+
Sbjct: 314 QSFAKSPYQKALIIMADLVINRM 336
>gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 353
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 96/326 (29%), Positives = 169/326 (51%), Gaps = 13/326 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V + + + + +YL+ +GGKR+RPMLTL TA + + +
Sbjct: 30 VDDGLALVEEALHREVRFADNLADVTTRYLLEAGGKRVRPMLTLLTAQLGKGNTPEVLQA 89
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E H A+L HDDV+DDS +RRG A+ VWGN +VL GD L ++A ++ + +
Sbjct: 90 AQAVEITHLASLYHDDVMDDSQMRRGVPTAQFVWGNSVAVLTGDLLFARA-SKLVSSLGE 148
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A++ + L G+L + ++ + Y+ V++ KT L + A ++ + +G
Sbjct: 149 RAIQLQADTFERLCLGQLHETIGPQDGEDAVAHYIRVLEDKTGSLIAVAAQMGIVFSGAD 208
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEV-NEMGKNIGEDFRNGKPTLPVILAFQRG- 245
+S + + ++G +G+AFQL+DDV+D E E GK G D R G TLPV+ +R
Sbjct: 209 SSYEEPVVTFGEKIGVAFQLIDDVIDLSSEGVAETGKTPGNDLRAGVATLPVLRLRERAL 268
Query: 246 ---------TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ +++ ST +DG+++ E A +RE+ T A+ + ++A +
Sbjct: 269 RDPEAAALLDRLDRDVMGSTADDGEVTPEATA-AISALREHEVTRQTLEEAHRWAREAFE 327
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L LP+ KK+L+ D ++R +
Sbjct: 328 ALEPLPEGPVKKALVRFADTIVERSS 353
>gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca]
Length = 363
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D+ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 49 RDLNGLYEDIRKELLISTAELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDVQA 108
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 109 SQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 168
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 169 RIGNTAVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 228
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ +EMGK D + G T PV+ A
Sbjct: 229 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDEMGKPTSADLKLGLATGPVLFAC 288
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 289 QQFPEMNAMIMRRFSVPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAVREISKLR 343
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 344 PSPERDALIQLSEIVLTR 361
>gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262]
gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262]
Length = 321
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 7/314 (2%)
Query: 9 LKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD++ V + + + + E D +L+ +GGKR+RPM +A + + +
Sbjct: 11 QKDIDLVEKELKRALTGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLSPDADFEAVKN 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 71 AGVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKD 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 131 VAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQ 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L +G +G+AFQ+ DDVLD+ G E+GK GED G TLP
Sbjct: 191 SEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLSQGNVTLP----VFFAM 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + E + ++++ A E A +Y +KA +L LP
Sbjct: 247 EDPFLKKRISQVTEDTQAEEIAVLVEEIKKSGA-KKAEDVATAYLKKAVATLDSLPQVPE 305
Query: 307 KKSLMEVVDFCLQR 320
K L ++V +R
Sbjct: 306 LKPLKQIVRVLDKR 319
>gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase ) [Natronomonas pharaonis DSM
2160]
gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Natronomonas pharaonis DSM
2160]
Length = 341
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 28/342 (8%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+E + E VN + +++ E + +YL+ +GGKRLRP + L A L
Sbjct: 5 DHVESAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADV 64
Query: 58 -------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ + A +IE I + TL+HDD++DD LRRG A + +
Sbjct: 65 EPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLE 124
Query: 105 TSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
T++L GD L S+AF + +S EAL+ L+ + EG+ + DVT E
Sbjct: 125 TAILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDVTTE 184
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+YL +++ KTAVL++AA + +++ G + +AL YG+++G AFQ+ DD+LD +
Sbjct: 185 EYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSD 244
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
E+GK G D K T+ + A +G E S ++ A + + +
Sbjct: 245 ELGKQRGSDLVENKRTVITLHARDQGIDVEGLV------SDDPSDAEIEAAVQTLEDAGS 298
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A K+ L LP++ ++ L ++ DF ++R
Sbjct: 299 IDFAREMALDLVTSGKERLDVLPENEARQLLEDIADFLVERS 340
>gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118]
gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118]
Length = 327
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 126/303 (41%), Positives = 177/303 (58%), Gaps = 2/303 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ +DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L L ++G
Sbjct: 13 SVIAQDMREVDQVIAHRLDSGVPLVGQVARYIIAAGGKRLRPALLLLICGALGFKGAQRF 72
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +EFIHT+TLLHDDVVDDS+LRRG A +GN SVLVGDFL S+ F M+++ +
Sbjct: 73 NLAAVVEFIHTSTLLHDDVVDDSSLRRGNPTANETFGNPASVLVGDFLYSRCFQMMVDAQ 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ L+ +AEGE++QL N ++ E YL VI+SKTA LF A+ V +++AG
Sbjct: 133 NMRIMQVLADATNVIAEGEVQQLMNMHNAELDEAGYLQVIRSKTAKLFEASARVGAILAG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + YG LG AFQ++DDVLDY GE MGKN+G+D R GK TLP+I A QRG
Sbjct: 193 SSPELEEICAEYGQALGTAFQVIDDVLDYTGEAAVMGKNLGDDLREGKTTLPLIAAMQRG 252
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
T + K I G + L + I++ AL A Q+A + R LP
Sbjct: 253 TASQSALIKEAIETGGV--AMLDQVIDIVKTTGALDVAHLAATQEAQRAIAAARQLPAGP 310
Query: 306 WKK 308
+
Sbjct: 311 HTE 313
>gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2
[Sus scrofa]
Length = 421
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D++ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 107 RDLKGLYEDIRKELFISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQA 166
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 167 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 226
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 227 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 286
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 287 LGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 346
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 347 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLR 401
Query: 303 DSSWKKSLMEVVDFCLQR 320
S +++L+++ + L R
Sbjct: 402 PSPEREALIQLSEIVLTR 419
>gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
43160]
gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
43160]
Length = 352
Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 2/315 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ +V + + S+ + + + +L+ +GGKR RP+L L A + + G
Sbjct: 40 LAAGLGRVEEALRTAVGSEHQFVREAAGHLVAAGGKRFRPLLALLAAELGDPHGQGVTEA 99
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A E H ATL HDDV+D++ +RRG +A W N ++L GDFL ++A ++ + +
Sbjct: 100 AVVCELTHLATLYHDDVMDEAVVRRGAPSANSRWSNSIAILTGDFLFARASDLLADLGPE 159
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L G++R+ ++ D + YL V+ KT L + + + AGV
Sbjct: 160 AVRIQARTFER-LVTGQIRETVGAQPGDDPVDHYLDVLADKTGSLVATSARFGASFAGVD 218
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ AL ++G +G+AFQL DD+LD GK G D R G TLP + A G
Sbjct: 219 AELVTALTAFGEEVGVAFQLSDDLLDIVSRDGASGKAPGTDLREGIATLPALFA-LAGDD 277
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + ++ +A ++R + AL Y +A+ L +P+ +
Sbjct: 278 PAEQRLRELVSGPITDDGEHAEALELLRSSAALQRATGVLREYADRAQARLSGVPEGPVR 337
Query: 308 KSLMEVVDFCLQRLN 322
+L + D+ + R +
Sbjct: 338 DALSALCDYVVTRTS 352
>gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
S4-378]
Length = 321
Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 7/314 (2%)
Query: 9 LKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD++ + + K + + E D +L+ +GGKR+RPM +A + + +
Sbjct: 11 QKDIDLIEKELKKALTGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLSPDADFEAVKN 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 71 AGVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKD 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 131 VAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQ 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L +G +G+AFQ+ DDVLD+ G E+GK GED G TLP
Sbjct: 191 SEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLSQGNVTLP----VFFAM 246
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + E + ++++ A E A +Y +KA +L LP
Sbjct: 247 EDPFLKKRISQVTEDTQAEEIAVLVEEIKKSGA-KKAEDVATAYLKKAVATLDSLPQVPE 305
Query: 307 KKSLMEVVDFCLQR 320
K L ++V +R
Sbjct: 306 LKPLKQIVRVLDKR 319
>gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 309
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALMLEYRGDNH 64
L K+++ + I + + SD ++ K+ GKR RP + A
Sbjct: 2 KLVEKELQPFSDSIKELVSSDQPILSMAAKHFFEKRHGKRFRPTIVQLMAK--------T 53
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
L +E IH A+L+HDDV+D++ RRG A ++ N+ +VL GD+LL++A ++
Sbjct: 54 AQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARL 113
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS--L 182
++ ++ ++ +L GE+ QL + E YL KTA L A ++
Sbjct: 114 ENTAVVQVMATALESLVAGEIMQLKSPAESLLEMESYLRKSYYKTASLICYACRSTALLG 173
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++V A + +G +LG+A+Q+ DD+LD+ +GK D G T P++ A
Sbjct: 174 GHAYGSTVATACEEFGFHLGLAYQIQDDILDFTAAATVLGKPALADMDLGLSTAPILYA- 232
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDSLRCL 301
+E K + + + A + ++ A+ A + Q+A D+L L
Sbjct: 233 ----AQEFPHLKPLVMRRFKEKGDKQAALEALYKSDVAMDKARALARFHAQRAVDALLRL 288
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P S + +L+ + + R
Sbjct: 289 PPSESRNALVRLTHAVITRK 308
>gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
Length = 320
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 83/326 (25%), Positives = 164/326 (50%), Gaps = 12/326 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M++ + + K+ + +++ + + + K+L+F+GGKR+RP L++ T L+ +
Sbjct: 1 MELFDKTI---LLKIEEELNRQVNKE-GKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDD 56
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A ++E IH +L+HDD++D+ + RRGK +V+G ++L GD L + AF
Sbjct: 57 IDEVLTPAVSVELIHGYSLIHDDIMDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFNA 116
Query: 121 VIETKSQEALEALSLV-----ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + ++ E + + + + T ++Y +I KT L A
Sbjct: 117 ISQMENLEKAHEILKIVSKASVKVCEGQATDMEFEEREVIPTIDEYFDMISKKTGALIVA 176
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+E+ +++A R+A+ Y +G+ FQ+ DDVLD G+ N +GK +G D GK T
Sbjct: 177 PIEIGAVMADFTEEERKAICEYAKRIGMTFQIQDDVLDLIGDKNTIGKPVGSDIVEGKKT 236
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ V+ A Q + EK + + + + E +K+A ++ ++ + + +AK
Sbjct: 237 IMVLHALQTLPEPEKQRFLKILGNSNATDEEIKEAIEML--GPSINYAKDIMKTATIEAK 294
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
D L+ D +K L + +F ++R+
Sbjct: 295 DYLKIF-DEEKRKRLENIAEFIIERV 319
>gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecium DO]
gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162]
gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071]
gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636]
gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679]
gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317]
gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082]
gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071]
gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636]
gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679]
gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317]
gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162]
gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082]
Length = 328
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 154/318 (48%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
K++ + + + + + + +K I +GGK LRP L + E D +
Sbjct: 13 LSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
LA +IE +HTATL+HDD+VD++ LRRG+ R +GN SV GD+L F + +
Sbjct: 73 LAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYST 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S + GEL Q+ N +++ ++YL I KTA LF + V + +G
Sbjct: 133 SLKSLQLNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+++G+AFQ++DD+LDY E E+GK + ED R G +LP
Sbjct: 193 TSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLP---LIYSL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + ++ E++ I+ + + A SY +KA ++ LP +S
Sbjct: 250 QKNKPKLLPYLEKKAAMTEEDVDAVRKIVEHTGGVEEARKLAASYTEKALKEIKKLPATS 309
Query: 306 --WKKSLMEVVDFCLQRL 321
K++L + L R
Sbjct: 310 LRTKENLFSLTQLILDRK 327
>gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 326
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
++ V LI + + + + L+ SGGK LRP +L + + + + V
Sbjct: 13 LKTNLSSVLSLIESHVRVRDKTVAATINNLVHSGGKLLRPAYSLLCSQIGPDSEKEKAVA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A AIE IH A+L+HDDV+DD+ R + GN+ ++ GD+L +F ++ + S
Sbjct: 73 VAAAIEAIHMASLVHDDVIDDADTRHNHATIHTMHGNKFAIYSGDYLFCISFQILAQHAS 132
Query: 127 QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
A + + + GEL QL+ ++ + YL + KTA LF+ + ++ G
Sbjct: 133 SLAHLDFNTRGMEKILAGELDQLNSRFKPSLSVKSYLSRVAGKTAQLFAISCYSGAMEGG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G +G+ FQ++DD+LD++G + +GK + D + G TLP+I A Q+
Sbjct: 193 ATRKQAMNAWNMGHYIGMTFQIMDDILDFKGSSHCLGKPVMSDLQQGIYTLPLIYAMQQ- 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ F ++ +L ++ + + + + A Y KA L LP
Sbjct: 252 --KPNAFKPFLEKKDMLTENDLTVIAELIDQYKGVEKAQALADKYTAKALKQLSKLPSGD 309
Query: 306 WKKSLMEVVDFCLQRLN 322
+K+ L EV L+R +
Sbjct: 310 YKEILEEVTTKLLKRKS 326
>gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
JV-V03]
gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
JV-V03]
Length = 338
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 154/320 (48%), Gaps = 9/320 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---- 63
KD+ ++N +ILK + S ++ ++ GK LRP + D
Sbjct: 21 VQKDIIEINQIILKHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFG-AFGPDADQKQDE 79
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVI 122
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 80 LKKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSE 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S ++ A + GE Q + + N++++E++YL+ IK KT VLF A + +
Sbjct: 140 NAQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLNQIKGKTGVLFGLACFIGAY 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A
Sbjct: 200 ESGIKVTKALKAKQFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFAL 259
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-L 301
Q + + ++ + L + ++ + + A Y +KA SL+
Sbjct: 260 Q--NDNNNHLHELVKMGKDLTQDQLHEIENLVNHLGGVERAQKLADQYTEKALASLKKHW 317
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+ + + ++ L+R
Sbjct: 318 PDNENRALIEQLTGRLLKRQ 337
>gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
Length = 342
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++ + + + D V++++ +GGKR+RP+L L A D + A A+
Sbjct: 29 ARIDEALPAVVDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAV 88
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIETKSQE 128
E H TL+HDD++D+ RRG W T++L GD ++ ++ V T ++
Sbjct: 89 EVFHNFTLVHDDLMDEDDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQVEGTDAEA 148
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L G+ S + VT E YL +I KT L SAA E+ S+I G +
Sbjct: 149 LYAVYHPMVERLCAGQALDASFETDDAVTVEAYLDMIDRKTGALLSAAFELGSVIGGAPS 208
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R L + G +G AFQ+ DD+LD + G+ +G D GK T + A +R
Sbjct: 209 PERDRLGTAGRLVGRAFQIQDDLLDLTADDEAWGRGVGGDLVQGKKTFLTLRALERAEGA 268
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E +++ + DG + +++ +A M + + ++Y +KA D L LP+++ +
Sbjct: 269 EHDWFARLVTDGGLPRDDVPEARERMADLGIFEEAREAVHTYTEKAHDHLHLLPETAAAE 328
Query: 309 SLMEVVDFCLQRLN 322
+L ++D R +
Sbjct: 329 TLHWLLDRLQARGH 342
>gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens]
Length = 320
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 10/319 (3%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLI---FSGGKRLRPMLTLATALMLE---YRGDNH 64
D ++ + + +V ++ + +L SGGK++R + L TA R
Sbjct: 1 DRSSLSRHMRDLVQVEVPVLGEAATHLFAGSNSGGKKIRATMVLLTARAFRKGRGRSLRQ 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
LA IE IHTA+L HDDV+D + +RRG ++ +G++ +VL GDFLL++A + +
Sbjct: 61 RKLAEIIEIIHTASLFHDDVIDGADVRRGCLSVSAKFGDKIAVLAGDFLLARACVALAKL 120
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI- 183
++ +E +S+V L GE+ Q+ + T + S
Sbjct: 121 ENLAVVELISVVIEHLVRGEIVQMRPESHSSDTHTLLEAYLHKSFYKTGSLMANACRAAA 180
Query: 184 --AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ A +YG ++G+AFQLVDD LD+ E+GK D + G T
Sbjct: 181 LLEDETQANCDAAFAYGRHVGLAFQLVDDALDFEASDLELGKPALADLQMGLVTASTCAP 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++ A I+ + + T A + A D+L L
Sbjct: 241 TIFAARTSPALETILKRKFER-AGDVDTAIEIVSRSEGVQQTRDLALVQAELAVDALSKL 299
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PDS +++L + R
Sbjct: 300 PDSDAQRALTALAHKVATR 318
>gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8]
gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8]
Length = 343
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++ + + + D V++++ +GGKR+RP+L L A D + A A+
Sbjct: 30 ARIDEALPAVVDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAV 89
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIETKSQE 128
E H TL+HDD++D+ RRG W T++L GD ++ ++ V T ++
Sbjct: 90 EVFHNFTLVHDDLMDEDDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQVEGTDAEA 149
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L G+ S + VT E YL +I KT L SAA E+ S+I G +
Sbjct: 150 LYAVYHPMVERLCAGQALDASFETDDAVTVEAYLDMIDRKTGALLSAAFELGSVIGGAPS 209
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
R L + G +G AFQ+ DD+LD + G+ +G D GK T + A +R
Sbjct: 210 PERDRLGTAGRLVGRAFQIQDDLLDLTADDEAWGRGVGGDLVQGKKTFLTLRALERAEGA 269
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E +++ + DG + +++ +A M + + ++Y +KA D L LP+++ +
Sbjct: 270 EHDWFARLVTDGGLPRDDVPEARERMADLGIFEEAREAVHTYTEKAHDHLHLLPETAAAE 329
Query: 309 SLMEVVDFCLQRLN 322
+L ++D R +
Sbjct: 330 TLHWLLDRLQARGH 343
>gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
Length = 325
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 125/320 (39%), Positives = 195/320 (60%), Gaps = 5/320 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L +D++ + LI + + +I +++ +LI SGGKR+RP++ ML
Sbjct: 9 LLQLKSLIQQDLDAMEILISQHSDKHIALITEIIHHLIKSGGKRIRPIIFFIICKMLNCT 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+N +L+A AIEFIH ATLLHDDV+D+S LRRGK + +WGN+ S+LVGDFLL+ +F
Sbjct: 69 NENKILIAAAIEFIHNATLLHDDVIDESDLRRGKKTSNFIWGNKASILVGDFLLAISFQW 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+IE K+ L LS + T+ GE++Q+ S N+++++E Y+ +I +KTA LF A E +
Sbjct: 129 LIECKNLNILSILSQTSNTIVVGEIQQMLSSHNINISKEKYIEIISAKTASLFGATCESA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A V +ALKS+G N GIAFQ++DD+LDY + GK +G D GK TLPVI+
Sbjct: 189 AHLAQVNLQESKALKSFGNNFGIAFQIMDDILDYTASNAQFGKKLGNDLSTGKTTLPVII 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+Q T EK FW + L++A ++ + A+ + A +Y +AK L
Sbjct: 249 AYQNATPEEKKFWDQISVNQN-----LEQAISYIKSHNAIEKSLEIATAYIDQAKACLTI 303
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+S++K L +++D L R
Sbjct: 304 FSESNYKMCLNKLLDCILYR 323
>gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
Length = 340
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 19/338 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ +L +L K E VN I + + V + V Y + +GGKR+RP++ + +AL
Sbjct: 2 VDVLSELHEKYGELVNKAIERYLTIGVDPSFRETVLYQVATGGKRIRPLMVIESALACGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ + A +E IH +L++DD++D++ LRR R +G+ ++LVG +
Sbjct: 62 SLESALPYAAIVELIHNYSLIYDDIIDEADLRRNMPTVRRKYGDYAAILVGIWYREAIEE 121
Query: 120 MVIETKSQEA-----------LEALSLVACTLAEGELRQLSLSKNLDVTEED------YL 162
V++T++ ++ + + R +N V E Y+
Sbjct: 122 AVLDTRNPSEVARVVAETIKAIDEGERLDILMEYSGRRDPYFIENRLVREITPALRDLYI 181
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+I KTA LF ++ + A N +AL ++G N+G+AFQ++DDVLD G++ + G
Sbjct: 182 RMISLKTAALFKTSMWLGGYSAKCGNEQLEALSNFGYNVGVAFQIIDDVLDIFGDLRKFG 241
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K IG+D + K VIL +K + +++K+A ++ +A +
Sbjct: 242 KEIGKDLKEHKVGNLVILLSLLESKEANKLLNVLSKQRP-TQDDVKEAVEVISATKAREE 300
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A Y KA L +P + L E+ F + R
Sbjct: 301 AIRMANEYMSKAISELSKVPRNEHTMKLEELAKFIVYR 338
>gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 323
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + V +L I I +++ +F+GGKR+RP L L + + + +
Sbjct: 12 ISRGLVCVENELLHAIGESDYRIRNMLS-GLFNGGKRIRPRLVLLSGMCFGELDEKMIHA 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A E IHTA+L+HDD++D S RR + GN +VL GDFL ++AF ++ E +
Sbjct: 71 AVAAELIHTASLVHDDIIDMSDYRRNNPTINSISGNHVAVLAGDFLFAKAFEILSEHELI 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ + GE+ Q ++ VTE+DY+ I KTA L A + AG
Sbjct: 131 NSMLYFVNAIQNMCSGEIVQSYRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAG 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + S+G +G AFQ+ DD+LD G +GK++ +D G +LP I
Sbjct: 191 SHEINLMGSFGYKIGRAFQITDDILDVTGNKKTLGKSVAQDITEGDISLPFIYL--LAES 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + +N ++ + + + A+ + +A Y +A + L +P S ++
Sbjct: 249 DNSDRYADKLNKESLNEDLKQILINEAICSGAVDKAQSKARQYVDEAVELLYEIPYSIYR 308
Query: 308 KSLMEVVDFCLQRL 321
++L+ + + R
Sbjct: 309 QALIALTLNLIGRQ 322
>gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
HTCC2170]
gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
HTCC2170]
Length = 334
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 152/313 (48%), Gaps = 6/313 (1%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + K + + + + Y++ GGKRLRP+LTL T + N + A AIE
Sbjct: 20 EFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMDAALAIE 79
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
H +L+HDD++DD+ LRRGK W T +L GD +L +A+ + +S E
Sbjct: 80 IFHNFSLVHDDIMDDAPLRRGKPTVHEKWDLNTGILSGDAMLIRAYQLFENYESDTFREL 139
Query: 133 LSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L + T + EG+ + DVT +YL +I+ KTAVL +AA+++ +IA ++
Sbjct: 140 AQLFSKTALEVCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAAAMKMGGIIANASST 199
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ + +G NLG+AFQL DD LD G+ GK +G D K T+ + A + G + +
Sbjct: 200 DQDCIYDFGKNLGLAFQLQDDYLDAFGDPKTFGKQVGGDIIENKKTVLYLAALENGDEEQ 259
Query: 250 KNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWK 307
KN + E ++ + A+ T+ + Y +KA L L S K
Sbjct: 260 KNELLDLYSIQPKDPSEKVEAIKEMFHSTGAVKHTKSQIEFYTKKAFGKLNSLDISNEKK 319
Query: 308 KSLMEVVDFCLQR 320
+ L + +QR
Sbjct: 320 ELLRGFGESLMQR 332
>gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris]
Length = 365
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D+ + I K + + ++ +Y GK RP++ + A N
Sbjct: 51 RDLNGLYEDIRKELLISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQA 110
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 111 SQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALA 170
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 171 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 230
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 231 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 290
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 291 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLR 345
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 346 PSAERDALIQLSEIVLTR 363
>gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Ailuropoda melanoleuca]
Length = 467
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D+ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 153 RDLNGLYEDIRKELLISTAELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDVQA 212
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 213 SQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 272
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 273 RIGNTAVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 332
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ +EMGK D + G T PV+ A
Sbjct: 333 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDEMGKPTSADLKLGLATGPVLFAC 392
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 393 QQFPEMNAMIMRRFSVPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAVREISKLR 447
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 448 PSPERDALIQLSEIVLTR 465
>gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 321
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A + +
Sbjct: 3 LNFLYANMQKDIDLVEKELKKALSGAAAETTSDTALHLLEAGGKRIRPMFVCLSARLSPD 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFGAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGIVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGSEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + E + ++++ A E A +Y +KA L
Sbjct: 242 ---VFFAMEDPFLKKRICQVTEETPAEEIAALVEEVKKSGA-KKAEDIATAYLKKAVGML 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase
[Rhodococcus erythropolis SK121]
gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase
[Rhodococcus erythropolis SK121]
Length = 359
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + + V L++ + + + + +L +GGKR RP+ T+ TA +
Sbjct: 40 EQLAAVVRGGLSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPN 99
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + + A E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +
Sbjct: 100 DPSIITAATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRL 159
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + L G++R+ K E YL V+ KT L +A+
Sbjct: 160 VSTLGPEAVRIIAET-FAELVTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFG 218
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G + + L+ G +G AFQ+ DD++D + GK G D R G TLPV+
Sbjct: 219 GTFSGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLY 278
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+ + + + + +++A ++ + +V + + Y AK L
Sbjct: 279 AFRE-EGADADRLRELLAGPVTEDALVEEALELLERSPGMVKAKAKLGEYAVAAKAQLAE 337
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP ++L+ +VD+ ++R+
Sbjct: 338 LPQGPANEALVRLVDYTIERV 358
>gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
Length = 328
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/320 (26%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGD 62
++++V LI +R+ I V+ L +GGK LRP + +
Sbjct: 11 LQANIKQVQALIDQRVVVANPQITQAVQALNAAGGKFLRPAFFFLFTEFGPRVKDHTQKE 70
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV- 121
+ +A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L + F ++
Sbjct: 71 KLLKVAASLEILHIATLIHDDIIDDSPLRRSQVTIQAKFGKDVAVYTGDLLFTIFFELIL 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + + + + GEL Q+ L D T +DYL I KTA LF+ A + +
Sbjct: 131 ETMQTSDYMAINAQAMKKILMGELDQMQLYYKQDQTIDDYLQAIAGKTAALFALAAQEGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
G N V ++ G +G+AFQ++DD+LDY K + ED G +LP+++A
Sbjct: 191 YFGGADNHVVALAETIGHKIGMAFQILDDILDYSASAETFTKPVLEDLAQGIYSLPLLIA 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ F ++ +++ + + L A SY Q+A ++ L
Sbjct: 251 IDQHPD---YFGPLLSKKQTMTQADMEAVAKGVVDYGGLDGARQMARSYTQEALAAIDSL 307
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+ K++L ++ + L+R
Sbjct: 308 PDNKSKQTLKQLTQYLLKRK 327
>gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
Length = 324
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 6/314 (1%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+K+ + + + + + ++Y++ GGKR+RP+LTL + + + V A AI
Sbjct: 9 DKIANHFSQIVANKEPKNLYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAI 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H +L+HDD++DD+ LRRG W T +L GD +L A+ + + +
Sbjct: 69 EVFHNFSLIHDDIMDDAPLRRGNQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKTFQK 128
Query: 132 ALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L + T + EG+ + DVT +YL +I+ KTAVL AA+++ +++A +
Sbjct: 129 LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAETSD 188
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ +G+NLGIAFQL DD LD G GK +G D K T + A + +
Sbjct: 189 ENADLIYDFGLNLGIAFQLQDDYLDAFGNPETFGKQVGGDIIENKKTYLYLKAMEFANEE 248
Query: 249 EKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSW 306
+K + + + ++ I + A T+ + KA ++L + D+
Sbjct: 249 DKQQLLHLFSIQPSENKDKIESVNTIFNGSGASEATKKAIQDFTFKAFETLEKMDIDNEK 308
Query: 307 KKSLMEVVDFCLQR 320
K L + + R
Sbjct: 309 KAILKAFGENLMGR 322
>gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
Length = 324
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 8/326 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ +E++N + + + + + + Y++ GGKRLRP+L L TA + E
Sbjct: 1 MHTIDQYRESFLEELNKI---TTEKEPKNLYEPINYILQLGGKRLRPILALMTADVFETD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-- 118
+ A A+E H +L+HDD++DD+ LRRGK W T +L GD +L +A+
Sbjct: 58 FKKAIPAAMAVEVFHNFSLVHDDIMDDAPLRRGKATVHEKWDINTGILSGDAMLIEAYRL 117
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ ++ S A + EG+ + DVT +YL +I+ KTAVL +AA+
Sbjct: 118 LEQYDGEQYKKLNVLFSTTALQVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVAAAM 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++IA + +G NLGIAFQL DD LD G+ GK +G D K T
Sbjct: 178 KMGAIIAETTVENEDLIYDFGKNLGIAFQLQDDYLDAFGDPKTFGKQVGGDIIENKKTYL 237
Query: 238 VILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A + + E+N + + + + +I E++A V T+ Y QKA +
Sbjct: 238 YLKALELSSNAEQNSLDQLFSIQPTNNNDKIATVKVIFEESKADVATKQAIEDYTQKAFN 297
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQRL 321
L L ++ K++L + + + R
Sbjct: 298 VLDKLEIPATNKEALKQFGLWLMTRK 323
>gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
Length = 328
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 14/325 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61
L +M + I + + ++ D+ Y GK RPM+ L + +
Sbjct: 8 QLVSTEMSTLYNDIKMELATYGSLLRDMSHYYFDGQGKAFRPMVVLLMSRACNFHHGAAE 67
Query: 62 -----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ ++ E IHTA+L+HDDV+D++ RRGK + G + ++L GD++L+
Sbjct: 68 NSLALPSQRRISMIAEMIHTASLVHDDVIDEADTRRGKACVSYLHGQRKAILTGDYILTV 127
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +++ + LS V L GE QL ++ D YL KTA L + +
Sbjct: 128 SSMALAAIGNKDVVILLSQVIEDLVRGEFMQLGTKEDEDERFAHYLKKTFKKTASLLAHS 187
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++++G V++ YG NLGIAFQLVDD+LD+ MGK D + G T
Sbjct: 188 CRAVAVLSGSSKDVQEVAYQYGKNLGIAFQLVDDMLDFMSTEELMGKPTAADLKLGLATA 247
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + +++ A + + +L A Y ++A
Sbjct: 248 PVLFAAEKYPELNAMIM-----RRFSEPGDVELAREAVTKTDSLQQARILAEQYCREAVR 302
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ L S +++L+ + L R
Sbjct: 303 QIQQLAPSPEREALVTLTQKVLNRK 327
>gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1
[Sus scrofa]
Length = 410
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D++ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 96 RDLKGLYEDIRKELFISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQA 155
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 156 SQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 215
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 216 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 275
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 276 LGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 335
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 336 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLR 390
Query: 303 DSSWKKSLMEVVDFCLQR 320
S +++L+++ + L R
Sbjct: 391 PSPEREALIQLSEIVLTR 408
>gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 336
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 12/331 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++L+ E++N +I + + + ++++ + +GGKR+RP+LTL A +++
Sbjct: 4 EVLKQQLAAAAEQINQVIKDDLAAVTNPRLAAILEHALLAGGKRIRPLLTLLAAQLVQGH 63
Query: 61 ----------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
LA + E++HTA+LLHDDV+D +ALRRG+ W N +++L G
Sbjct: 64 KGTENPQAGTATPWQQLAISFEYLHTASLLHDDVIDHAALRRGRETVNTRWDNGSAILAG 123
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
DFL ++A + LE + + + E Q + + D EE Y V+ KTA
Sbjct: 124 DFLHARALLLAGRAGGVPCLELIGTATQAMVDSEFIQQEAAASRDWREETYFAVLDGKTA 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L +AA E + AG + R+AL +YG NLG AFQ++DD+LDY GE GK +G D +
Sbjct: 184 ALIAAACEAGGVAAGGNPAQRRALHTYGGNLGRAFQIIDDLLDYLGEPGATGKAVGNDLQ 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYS 289
GK TLP+++A QR + ++ ++ I + E + ++ + AL RA
Sbjct: 244 EGKMTLPLLIARQRASAEQQAELEAIITAPAQRRREQFTRVRTLLEQTGALAACRQRAEE 303
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+L + + L + + LQR
Sbjct: 304 LIAAGDQALAVFAATPQRDLLHALGQYVLQR 334
>gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
Length = 328
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 158/318 (49%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
K++ + + + + + + +K I +GGK LRP L + E D +
Sbjct: 13 LSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
LA +IE +HTATL+HDD+VD++ LRR + R +GN SV GD+L F + +
Sbjct: 73 LAASIEMLHTATLIHDDIVDEADLRRSQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYST 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S + GEL Q+ N +++ ++YL I KTA LF + V + +G
Sbjct: 133 SLKSLQLNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+++G+AFQ++DD+LDY E E+GK + ED R G +LP
Sbjct: 193 TSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLP---LIYSL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K ++ +++ ++++ I+ + + + A +Y ++A ++ LPD+S
Sbjct: 250 QKNKQTLLPYLEKKTEMTEKDVEAVRKIVERTGGVGEAKKLAAAYTERALKEIKKLPDTS 309
Query: 306 --WKKSLMEVVDFCLQRL 321
+++L + L R
Sbjct: 310 LRTRENLFSLTQLILDRK 327
>gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4]
gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis
PR4]
Length = 349
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L + + V L++ + + + + +L +GGKR RP+ T+ TA +
Sbjct: 30 EQLAAVVRGGLSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPN 89
Query: 62 D-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + + A E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +
Sbjct: 90 DPSIITAATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRL 149
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + L G++R+ K E YL V+ KT L +A+
Sbjct: 150 VSTLGPEAVRIIAET-FAELVTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFG 208
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G + + L+ G +G AFQ+ DD++D + GK G D R G TLPV+
Sbjct: 209 GTFSGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLY 268
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
AF+ + + + + +++A ++ + +V + + Y AK L
Sbjct: 269 AFRE-EGADADRLRELLAGPVTEDALVEEALELLERSPGMVKAKAKLGEYAVSAKAQLAE 327
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP ++L+ +VD+ ++R+
Sbjct: 328 LPQGPANEALVRLVDYTIERV 348
>gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
Length = 320
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +I K+I ++ + + +I GGK LRP L + + + + L
Sbjct: 8 LAPELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIAL 67
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S RR +V + +G T+V GD+L F ++ S
Sbjct: 68 AAAIETLHTATLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASS 127
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ S + +GEL Q++ +T +DYL + KT LF+ + + + +G
Sbjct: 128 LRSIQQDSGSMEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGS 187
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR
Sbjct: 188 SPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQR-- 245
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F +I+ + + ++ ++ + A ++A L+ LP +
Sbjct: 246 -NRQAFLPLLAKKDQITDAEMNELRQLVIHHQGVEQAYAMAQKRTEQAIAGLQKLPAGAA 304
Query: 307 KKSLMEVVDFCLQRL 321
+ L+ + L R
Sbjct: 305 QDDLIRLTQSLLNRK 319
>gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
FSL F6-596]
gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
FSL F6-596]
Length = 324
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 6 LNFLYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLSPN 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFEMVRDASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDIAAHKMLSRVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 186 LGGIVSGQSQADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + K + +++ A E A +Y +KA +L
Sbjct: 245 ---VFFAMEDSFLKKRISQITEKTESVEMAALVAEVKKTGA-KKAEDVATAYLKKALATL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 301 DSLPQVPELKPLKQIVRVLDKR 322
>gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2]
Length = 336
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 143/321 (44%), Gaps = 3/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +E V + + ++ K+L+ +GGKR RP L L TA + E D
Sbjct: 16 QLAADISTQLEAVERRLYEVTEQTRKLPDTTSKHLLAAGGKRARPNLLLLTARLGEANRD 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E IH A+L HDDV+DD+ +RRG AA VWGN ++L GD L S+A V
Sbjct: 76 AIIDAAVAVELIHLASLYHDDVMDDAPVRRGAPAAHEVWGNSVAILTGDLLFSKA-SGVT 134
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
EA+ + L G+L + + E Y+ V+ KT L + + + +
Sbjct: 135 AKLGPEAVRVQAETFERLVLGQLNEFAGPPEDADAIEHYIQVLADKTGSLIATSAQFGVM 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--VIL 240
+ S+ + ++ +G +GIAFQL DD++D + GK G D R PTLP +
Sbjct: 195 FSQADQSLAEPVRIFGERVGIAFQLADDIIDLTTTSSVSGKTPGTDLRERVPTLPVLYVR 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ S E L+ A + + A + AK +L
Sbjct: 255 AAAADGDATAAEVVELLDADLSSDEALESARAALAAHPVTARARAEAVRWADDAKAALAP 314
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LPD K+SL D + R
Sbjct: 315 LPDGVVKESLFTFADSVVTRS 335
>gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
Length = 324
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 5/304 (1%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ + + + D + Y++ GGKRLRP+LTL + E + A AIE H +L+HD
Sbjct: 20 LEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEIFHNFSLVHD 79
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACT 139
D++DD+ LRRGK W T +L GD +L +A+ + + + S A
Sbjct: 80 DIMDDAPLRRGKETVHEKWDINTGILSGDAMLIRAYQLFENYEGDTFKELAKLFSKTAIE 139
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ EG+ + DVT +Y+ +I+ KTAVL AAL++ +++AG + ++A+ +YG
Sbjct: 140 VCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASKTCQEAIYNYGR 199
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+LG+AFQL DD LD G+ GK +G D K T + A K + + +
Sbjct: 200 DLGLAFQLQDDYLDAFGDPESFGKQVGGDIIENKKTFLYLTALINSDKDDAQQLEHFFSI 259
Query: 260 GKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFC 317
E ++ ++ A TE Y QKA +L + S KK L +
Sbjct: 260 SPADPAEKIETVKQQFLDSGAAKATEQEIAKYTQKAFTALDNVDISEDKKEVLRLFGESL 319
Query: 318 LQRL 321
++R
Sbjct: 320 MKRT 323
>gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus]
Length = 383
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 69 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 128
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 129 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 188
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 189 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 248
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 249 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 308
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 309 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 363
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 364 PSTERDALIQLSESVLTR 381
>gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum]
Length = 485
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 28/339 (8%)
Query: 3 MLEDLTLKDMEKVNFLILKR--------------ICSDVEMIPDVVKYLIFSGGKRLRPM 48
+ + D++K+ I++ + ++ + Y GKR+RP
Sbjct: 154 DIFKMVDSDLQKLTNNIVEHIKNHLSGNSSIGSGLQKPHPILVSISSYYFQLKGKRIRPT 213
Query: 49 LTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ L + L + + LA +E IHTATL+HDDV+D++ RR + +
Sbjct: 214 IILLLSRCLLQQKNITEPIASQIKLAEIVEMIHTATLVHDDVIDEATTRRDVPSVNKSFS 273
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
N+ S+L GD+LL++A ++ + ++ + E +S L EGE Q K+ + + E YL
Sbjct: 274 NKLSILCGDYLLARASVLLSQLRNPDVSELISTSLADLVEGEFMQ---VKSNESSFEQYL 330
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
KTA L S + + ++L+ G +G NLG+AFQL+DD+LDY +G
Sbjct: 331 RKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKNLGLAFQLIDDLLDYTSTTEVLG 390
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K D G T PV+ A E I+ + ++++A ++ ++R +
Sbjct: 391 KQAFADLAQGLATAPVLYA-----SIEHPQLLDMISRKFSADGDVEEARSLVFKSRGIEM 445
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
T A Y KA + L P S + L+ + + R
Sbjct: 446 TRALATEYINKAIEILIQFPKSEARDVLILLCHTIVTRK 484
>gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
S4-120]
gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
S4-120]
Length = 288
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 34 VKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
+K LI +GGK LRP L +A ++ + V +A A+E +H ATL+HDDVVDDS LRR
Sbjct: 1 MKDLIHAGGKLLRPAFALLSAQAGPDFDKERAVSIAAALEVLHMATLIHDDVVDDSPLRR 60
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVACTLAEGELRQLSLS 151
G +G +V GD+L F + S E +E S + GEL Q+ S
Sbjct: 61 GIPTIHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMRTS 120
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
++VT +YL I KTA LF+ + + + + G LG+AFQ++DDV
Sbjct: 121 YKMNVTVREYLTRISGKTAQLFALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQIIDDV 180
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
LDY +GK + D + G +LP+I A + F ++ + ++
Sbjct: 181 LDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK---GHLAEFEPLLSQKLDMTDDASEQVL 237
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ + + A Y KA ++ LP +++ + + L R
Sbjct: 238 ALISKYNGVEQAFKLANKYTNKALREIKKLPAGAYRDDMYRLTKSILDR 286
>gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus]
Length = 385
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 71 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 130
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 131 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 190
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 191 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 250
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 251 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 310
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 311 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 365
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 366 PSTERDALIQLSESVLTR 383
>gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 332
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62
+ ++ L+ +CS E++ D + +L +GGKR RP+ T+ +A +
Sbjct: 12 FAATVRDGVGRIEQLMDTELCSADEVMTDSLTHLFKAGGKRFRPLFTVLSAQIGPNPDAH 71
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V
Sbjct: 72 EVTIAGAVIELVHLATLYHDDVMDEAEVRRGAPTANVRWGNNVAILAGDYLFATASRLVS 131
Query: 123 --ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + T E R L+ + E YL V+ KTA L +AA
Sbjct: 132 LLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPVEHYLKVVYEKTACLIAAAGRFG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++
Sbjct: 192 AMFSGADAEQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDIREGVHTLPMLY 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + + +A ++R + + + +A+D L
Sbjct: 252 ALREPGPAAARLAELLAG-PTDDDDAVAEALALLRASPGMARAKQTLAECAAQARDELAL 310
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPD +++L +VD+ + R
Sbjct: 311 LPDLPGRRALQTLVDYTISR 330
>gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS]
gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS]
Length = 332
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 4/312 (1%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
K+N + + + D +Y++ GKR+RP LTL A + + DN + +A I
Sbjct: 19 AKINEALAACFPKEKPATLYDPARYILEGKGKRIRPFLTLLAAEAVSGKSDNALGVALGI 78
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-- 129
E +H TL+HDD++D + LR G+ W ++L GD +++ A+ + ++ S
Sbjct: 79 EVLHNFTLMHDDIMDQADLRHGRPTVHKQWNVNAAILSGDMMIAYAYELALKAISSRHAE 138
Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + T+ EG+ + L + DVT DYL +I KT L SAALE +
Sbjct: 139 IIHIFNDANITICEGQALDMELEQRKDVTIADYLDMISKKTGRLISAALEAGGVAGDGTP 198
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
AL ++G +G AFQ+ DD LD + GK G D NGK T ++ + +
Sbjct: 199 EQIAALVTFGEKIGRAFQIQDDYLDIMAGDGKSGKVPGGDVINGKKTWLLLRSLELAEGA 258
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ +S ++ S +N+ I + L +T + + A +L LP +
Sbjct: 259 DRELLQSIFDNNGTSPDNVPAVKAIFEKCGVLNETRAKINEDTEAALAALDALPFEEGRG 318
Query: 309 SLMEVVDFCLQR 320
L + ++R
Sbjct: 319 YLRGFANILMKR 330
>gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
Length = 316
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 13/317 (4%)
Query: 15 VNFLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
N IL + ++E + + K+L+ +GGKR+RP L++ + + D +
Sbjct: 2 FNEEILNSMSKELEKYFEKDSNLYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAP 61
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A ++E IH TL+HDD++D+ RRGK V+G ++L GD L ++AF +
Sbjct: 62 ALSVELIHNYTLVHDDIMDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALSTIDDS 121
Query: 128 EALEALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + + T E Y+++I KT L A + + +++A
Sbjct: 122 IKAHKVLKILSKACVEVCEGQTDDMEFETTFPTMEQYVNMISKKTGALIEAPILIGAIMA 181
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+AL Y +GI FQ+ DD+LD G+ +GK +G D +GK T+ VI A
Sbjct: 182 DCTMEETEALYQYSKRIGINFQIQDDILDLIGDQKTIGKPVGSDILSGKKTMMVIHALDT 241
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ +K + + E + +A ++ + ++ + +AK+ L+ ++
Sbjct: 242 LSNDKKERLLQILGNENAKSEEITEAIGLL--SNSIEYAKNLMNESTIEAKEFLKIFDEN 299
Query: 305 SWKKSLMEVVDFCLQRL 321
+K L ++ DF + R+
Sbjct: 300 R-RKPLEDIADFIVSRI 315
>gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 226
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 149/224 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M
Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S
Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
++AG + L+ YG LG AFQL+DD+LDY E + GKN
Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSAEASIYGKN 226
>gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1]
gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanospirillum hungatei JF-1]
Length = 320
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 154/324 (47%), Gaps = 13/324 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRG 61
LE K ++VN L+ + +L+F+GGKRLRP L A +
Sbjct: 2 ELETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLFAGGKRLRPALFKLAADAVTPGAS 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A+E H TL+HDD++D RRG+ +WG ++L GD L ++AF ++
Sbjct: 62 QKIMQAGLALEVTHNFTLIHDDIMDKDVYRRGQKTVHTLWGEPAAILAGDVLYARAFFLI 121
Query: 122 IETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ E + + + EG+ + +S + DVT ++YL +I KT VL+ AA
Sbjct: 122 CNAEAPEGAKVRAISLLARTCEEICEGQQQDMSFEEREDVTRDEYLDMITKKTGVLYGAA 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ SL+AG + AL +YG +G AFQ+ DD++D + GK+ D R GK TL
Sbjct: 182 AAIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLIDLLASSEKSGKDQASDIREGKQTL 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I A ++G + +S +++ ++ E + E A A +
Sbjct: 242 IAITAREKGIDLKPW-------RRSLSKDDIVSLIALLNEKGVIHSVEQEANDMISSAIN 294
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
L LPD++ KK L ++ + ++R
Sbjct: 295 GLSVLPDTTEKKLLADLAWYFIKR 318
>gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus]
gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus]
Length = 336
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 22 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 81
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 82 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 141
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 142 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 201
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 202 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 261
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 262 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 316
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 317 PSTERDALIQLSESVLTR 334
>gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Meleagris gallopavo]
Length = 336
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L KD++ + I K + + ++ +Y GK RPM+ + A N
Sbjct: 18 QLGRKDLKNLYEDIKKELLVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSR 77
Query: 66 LLACAI-------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + E IHTA+L+HDDV+DD+ RRGK+ +WG + +VL GDF+LS A
Sbjct: 78 EVQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAAS 137
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 138 LALARIGNTTIISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK 197
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S+++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV
Sbjct: 198 AVSILSCPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPV 257
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + + G ++++A + ++ + T Y A Y +A +
Sbjct: 258 LFACRQFPEMNAMIMRRFSKPG-----DVERARKYVLQSDGVQQTTYLAQRYCHEATREI 312
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
R L S +++L+++ + L R
Sbjct: 313 RKLRPSPEREALIQLTEMVLVR 334
>gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
Length = 317
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 166/314 (52%), Gaps = 7/314 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++K++ + K + + E + + K+L+F+GGKRLRP LT+ T + + + + A A+
Sbjct: 8 LKKIDEELKKYVDKNDE-LYNASKHLLFAGGKRLRPYLTVITYNLKKDNMEEILPAAAAV 66
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH TL+HDD++D+ RRGK +V+G ++L GD L ++AF V K +
Sbjct: 67 ELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFEAVSNIKDSKKAH 126
Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ + +N + T E+YL +I+ KT L A++E+ +++A
Sbjct: 127 DVLKILSKACVEVCEGQAMDMKFENYNPTMEEYLEMIRKKTGALLEASVEIGAIMADCSE 186
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ ALK Y +G+ FQ+ DDVLD G+ N++GK +G D R GK T+ VI A + +
Sbjct: 187 EEKTALKEYAKRIGLTFQIQDDVLDLIGDKNKIGKPVGSDIREGKKTIIVIHALKTLDEE 246
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+K + + I E +K+A I++ ++ + ++AK+ L+ D +K
Sbjct: 247 KKRRLLEILGNKNIGEEEIKEAIEILK--PSIEYAKELMKIKTEEAKNYLKIF-DEERRK 303
Query: 309 SLMEVVDFCLQRLN 322
L ++ DF + R++
Sbjct: 304 VLEDLADFIISRIH 317
>gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
ATCC 33200]
gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
ATCC 33200]
Length = 350
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 159/319 (49%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
T KDM +N +ILK + + ++ D +K S GK LRP + + +
Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIE 123
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSEN 152
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+S ++ A + GE Q + + N++++E++YL IK KT VLF A + +
Sbjct: 153 AQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGAYE 212
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q
Sbjct: 213 SGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 272
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LP 302
+ + D ++ E L++ ++ + + + A + KA +L+ P
Sbjct: 273 NDSTGCLHELVKLGKD--LTKEQLQEIEKMVNDLGGVKRAQKLADKFTDKALHNLQKHWP 330
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D+ ++ L E+ L+R
Sbjct: 331 DNKTRQQLEELTSILLKRS 349
>gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 313
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 92/304 (30%), Positives = 154/304 (50%), Gaps = 7/304 (2%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ + + ++ YL+ S GK LRP L A + + A+E IH A+L+HD
Sbjct: 1 MSTGNPQVEPIIDYLLESSGKMLRPRLLYLAASPYPHDPLMVRDMGVAVELIHLASLVHD 60
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
DV+D + RRG+ + + N+TSVL GD L + AF ++ + + ++ ++ + +
Sbjct: 61 DVIDQALTRRGQESINSRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQLMCQ 120
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
GE++QLSL+ NLDV+EE+Y SKTA LF+ + V + I+ + L+ YG+ LG
Sbjct: 121 GEIKQLSLAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYGLYLG 180
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
A+Q++DD+LD + +GK G D + G TLP+I A + G++
Sbjct: 181 YAYQIIDDILDLVADSQALGKPAGNDLKEGNITLPIIYALKTKEYGSLLRKILAGETGQL 240
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ--- 319
LK I+ ++ A+ + + QKA SL P S K + + F ++
Sbjct: 241 DTRELK---NILLDSGAIEYARSISRQFLQKALASLELFPVSPAIKEMKNIALFIMEEYY 297
Query: 320 -RLN 322
RL+
Sbjct: 298 ARLS 301
>gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 354
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 15/330 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR----- 60
++ L +E+V + + D +L+ +GGKR+RP+LT+ +L+ +
Sbjct: 25 EVVLTALEQVEEQLDSALGFDDLFSDTAAHHLMAAGGKRVRPVLTVLASLLGDPALASGE 84
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
A +E H ATL HDDV+D++ +RRG AA +WGN ++L GD + ++
Sbjct: 85 VADVDAPARQAAVVMELTHLATLYHDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIFAR 144
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A ++ ++ + L +G+L + E Y V+ KT L +AA
Sbjct: 145 ASQLMA-ELGTRPVQIQADTFERLVQGQLWETRGPAEGTDPIEHYYAVLSGKTGSLIAAA 203
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +L+ G + Q +++YG +G+AFQL DD++D G+ +GK G D R PTL
Sbjct: 204 GMLGALLGGADEAAVQVMRAYGEKVGLAFQLADDLIDLTGDTERIGKVPGTDLRERVPTL 263
Query: 237 PVILAFQRGTKREK-----NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+L + ++ ++ + + L A + + A+ + +
Sbjct: 264 TTLLLARAAQGEGPEAEDARRVRALVDGPLDTDDQLAAAVAALTGHPAIDEAWAITRGWA 323
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++AK +L LPDS+ K +L D+ + R
Sbjct: 324 EQAKQALTPLPDSAVKTALEAFADYVVGRS 353
>gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
Length = 328
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 14/325 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61
L +M + I + + ++ D+ Y GK RPM+ L + +
Sbjct: 8 QLVSTEMSTLYNDIKMELATYGTILRDMSHYYFDGQGKAFRPMVVLLMSRACNFHNGAAE 67
Query: 62 -----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ ++ E IHTA+L+HDDV+D++ RRGK + G + ++L GD++L+
Sbjct: 68 NSLALPSQRRISMIAEMIHTASLVHDDVIDEADTRRGKACVSYLHGQRKAILTGDYILTV 127
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +++ + LS V L GE QL ++ D YL KTA L + +
Sbjct: 128 SSMALAAIGNKDVVILLSQVIEDLVRGEFMQLGTKEDEDERFAHYLKKTFKKTASLLAHS 187
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++++G V++ YG NLGIAFQLVDD+LD+ MGK D + G T
Sbjct: 188 CRAVAVLSGSSKDVQEVAYQYGKNLGIAFQLVDDMLDFMSTEELMGKPTAADLKLGLATA 247
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + +++ A + + +L A Y ++A
Sbjct: 248 PVLFAAEKYPELNAMIM-----RRFSEPGDVELAREAVTKTDSLQQARILAEQYCREAVR 302
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ L S +++L+ + L R
Sbjct: 303 QIQQLAPSPEREALVTLTQKVLNRK 327
>gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026]
Length = 350
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/319 (27%), Positives = 160/319 (50%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
T KDM +N +ILK + + ++ D +K S GK LRP + + +
Sbjct: 33 TQKDMIAINLIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIE 123
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSEN 152
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+S ++ A + GE Q + + N++++E++YL IK KT VLF A + +
Sbjct: 153 AQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGAYE 212
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q
Sbjct: 213 SGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 272
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LP 302
+ + D ++ E L++ ++ + + + A Y KA +L+ P
Sbjct: 273 NDSTGRLHELVKLGQD--LTKEQLQEIEKMVNDLGGVKRAQKLADKYTDKALHNLQKHWP 330
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D+ ++ L E+ + L+R
Sbjct: 331 DNKTRQQLEELTNILLKRS 349
>gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
FSL N1-067]
Length = 324
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A ++
Sbjct: 6 LNFLYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLVPT 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFEMVRDASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDVAAHKMLSNVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G S + L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 186 LGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA +L
Sbjct: 245 ---VFFAMEDPFLKKRISQVTEETETEEIAALVAEVKKTGA-KKAEDVATAYLKKALATL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 301 DSLPQVPELKPLKQIVRVLDKR 322
>gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica]
Length = 412
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L +D+ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 94 KLGRRDLTDLYEDIKKELLVSTTELKEMCEYYFDGRGKAFRPIVVVLMARACNVHHNNCR 153
Query: 66 L-------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A E IHTA+L+HDD++DD++ RRGK +WG + +VL GDF+LS A
Sbjct: 154 DMQASQRSIALIAEMIHTASLVHDDIIDDASSRRGKHTVNQIWGEKKAVLAGDFILSAAS 213
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ V L GE QL +N + Y+ KTA L + + +
Sbjct: 214 VALARIGNTTIVSVLTQVIEDLVRGEFLQLGSKENENERFAHYIEKTFKKTASLLANSCK 273
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++ V + YG N+GIAFQL+DDVLD+ +++GK D + G T PV
Sbjct: 274 AVSILGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFTSCTDQLGKPTAADLKLGLATGPV 333
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A Q+ + + G ++++A + ++ + T Y A Y KA +
Sbjct: 334 LFACQQFPEMNAMIMRRFNLPG-----DVERAQQYVLQSDGVQQTTYLAQQYCHKAIREI 388
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L S + +L+++ + L R
Sbjct: 389 SKLRPSPERDALIQLTEIVLTR 410
>gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8]
gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8]
Length = 325
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/327 (27%), Positives = 160/327 (48%), Gaps = 13/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59
M L ++++ +I K + +L+ +GGKRLRP + + +A +
Sbjct: 5 MSDLSAYLKSVAQQIDGMIEKNFTHAGGELDRASAHLLSAGGKRLRPAVVMLSADAIRHG 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E HT TL+HDD++D +LRRG W T +L GD L ++AF
Sbjct: 65 SSKDVMPAALALEVTHTFTLIHDDIMDGDSLRRGVPTVHTKWDMPTGILAGDVLYARAFE 124
Query: 120 MVIETKSQEALEAL-----SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++K+ E + + + EG+ + +S DVTEE+Y+ ++ KT VL++
Sbjct: 125 FICQSKADEGPKVQAVALLARACADICEGQHQDMSFEHRADVTEEEYMAMVAKKTGVLYA 184
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA + +AG +AL +G+N GIAFQ+ DD++D + GK+ G D R GK
Sbjct: 185 AAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLIDLLTPTEKSGKDQGSDLREGKQ 244
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL +I+A Q+G ++S ++K A + + + + +A +
Sbjct: 245 TLVMIIARQKGVDL-------LKYRHELSPADIKAAIQELTDAGVIDAVKKKAADLVADS 297
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L LP + ++ +M+V +F + R
Sbjct: 298 NRLLMVLPPTKERQLIMDVGEFFVTRS 324
>gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN]
gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
Br4923]
gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae]
gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
Br4923]
Length = 330
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 3/319 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ L+ + E++ + V +L +GGKR RP+ T+ +A +
Sbjct: 12 AFAATVQDRVVRIEQLMDAELRDTDEVMTESVLHLFAAGGKRFRPLFTVLSAQIGPRPDA 71
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ IE +H A+L HDDV+D++ +RRG +A L W N ++L GD+L + A +V
Sbjct: 72 PEVIIAGAVIELVHLASLYHDDVMDEAEVRRGAPSANLRWSNSVAILAGDYLFATASRLV 131
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+A+ ++ L G++R+ + E YL V+ KT L +A +
Sbjct: 132 S-QLGLDAVRIIADTFAQLVTGQMRETRGVPEGADSIEQYLKVVYEKTGCLIGSAGRLGG 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG + L G +G AFQ+ DD++D + + GK G D R G TLP++ A
Sbjct: 191 LFAGAHAEQVERLSRLGSIVGTAFQISDDIIDIDSDYTKSGKLPGTDVREGVRTLPILYA 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + +A ++R + + Y +A L L
Sbjct: 251 LRETGPDSERLRALLAGPVD-NDAEVVEALALLRASPGMARARQVLAHYADQASGELAQL 309
Query: 302 PDSSWKKSLMEVVDFCLQR 320
PD + +L +VD+ R
Sbjct: 310 PDGPSRDALATLVDYTTNR 328
>gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
Length = 328
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGKIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKETLTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
[Taeniopygia guttata]
Length = 677
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-- 63
L KD++ + I K + + ++ Y GK RPM+ + A +N
Sbjct: 359 QLGRKDLKNLYEDIKKELLVSAAELKEMCDYYFDGKGKAFRPMIVVLMARACNIHHNNSK 418
Query: 64 -----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A E IHTA+L+HDDV+DD+ RRGK +WG + +VL GDF+LS A
Sbjct: 419 EVQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKRTLNQIWGERKAVLAGDFILSAAS 478
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 479 VALARIGNTTIVSVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK 538
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV
Sbjct: 539 AVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPTAADLKLGLATGPV 598
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + + G ++++A+ + ++ + T Y A Y A +
Sbjct: 599 LFACRQFPEMNAMIMRRFSKPG-----DVERAWKYVLQSDGVQQTTYLAQRYCHAATREI 653
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
R L S +++L+ + + L R
Sbjct: 654 RKLRPSPEREALVHLTEMVLMR 675
>gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
Length = 323
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 8 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 67
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 68 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 127
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 128 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 187
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 188 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 245 EANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 304
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 305 AQAKEQLYEITQTILTREN 323
>gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 325
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +I K+I ++ + + +I GGK LRP L + + + + L
Sbjct: 13 LAPELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIAL 72
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S RR +V + +G T+V GD+L F ++ S
Sbjct: 73 AAAIETLHTATLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASS 132
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ S + +GEL Q++ +T +DYL + KT LF+ + + + +G
Sbjct: 133 LRSIQQDSGSMEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGS 192
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR
Sbjct: 193 SPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQR-- 250
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F +I+ + + ++ ++ + A ++A L+ LP +
Sbjct: 251 -NRQAFLPLLAKKDQITDAEMNELRQLVIHHQGVEQAYAMAQKRTEQAIAGLQKLPAGAA 309
Query: 307 KKSLMEVVDFCLQRL 321
+ L+ + L R
Sbjct: 310 QDDLIRLTQSLLNRK 324
>gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis]
gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis]
Length = 435
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+T+ A L Y +
Sbjct: 115 ILDDELKYFYDDVRDLLQSGTSQPELDTIACYYFDGQGKALRPMVTMLMAKALNYHLNNE 174
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 175 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 234
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 235 ASIMISRLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 294
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 295 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 354
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 355 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 409
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 410 LAQELTESPYQKGLQVVADLVINRM 434
>gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae]
gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae]
Length = 441
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
+ +++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 121 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNKE 180
Query: 64 -------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 181 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSV 240
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 241 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 300
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA +++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 301 LKATAVIAQAEDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 360
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 361 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 415
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 416 LAQELTESPYQKGLQVVADLVINRM 440
>gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
Length = 321
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 159/314 (50%), Gaps = 4/314 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++ V L+ K + + I + + LI SGGK LRP L + + +
Sbjct: 11 IKRELVDVLDLMKKNVKCKDKKIENSIIELIESGGKLLRPAFVLIGSKFGTNDTEKSIPT 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A IE +H ATL+HDDV+DDS LRRG+ + +G +V +GD+L F ++ + S
Sbjct: 71 AAVIEMLHMATLVHDDVIDDSKLRRGRETIQSKYGKDYAVYIGDYLFCVCFKILATSASL 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+A++ S + GE+ QL+ ++ ++ +DYL+ I KTA LFS +L + +
Sbjct: 131 QAIKVDSRAMSKICMGEVNQLNSRFSMKLSVKDYLNRISGKTAELFSISLYLGAAECNAD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ V + L G NLG+AFQ++DD+LDY G N + K+ D + G T+P K
Sbjct: 191 DKVSKELGKIGHNLGMAFQIIDDILDYEGNDNSIKKSAANDLKQGIYTIP----LIYAYK 246
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
K+ + + + + ++ +++EN + + A Y +K + LP++ +K
Sbjct: 247 NNKSAFDDVLGKDFYTEDEVRNIVNLVKENNGIKMAKELAEKYMKKCFKGIDMLPNNEYK 306
Query: 308 KSLMEVVDFCLQRL 321
L E+ ++ L R
Sbjct: 307 NILREIAEWLLLRT 320
>gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF]
Length = 328
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKETLTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
Length = 323
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 12/327 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ K V + D + Y+I GGKRLRP++ L M
Sbjct: 4 LEEYQEIVTK---AVEKY---TFKDKPTELYDPMNYIISHGGKRLRPIMVLMANDMFGGD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A AIEF H TL+HDD++D++ LRR K + G +L GD LL +++
Sbjct: 58 IQKAIKPALAIEFFHNFTLIHDDIMDEAPLRRNKPTIHTLHGLNAGILSGDALLLKSYKF 117
Query: 121 VIETKSQEALEALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + + + T EG+ ++ DVT DY+ +I KT VL +++
Sbjct: 118 FEDLEPELFKACIRVFTHTGLLLCEGQQYDINFETLGDVTFNDYIRMITYKTGVLTASSF 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
E+ +LIAG +A+ ++G NLGIAFQ++DD LD G+ + GK D K T+
Sbjct: 178 EIGALIAGSDFKDAKAIFNFGKNLGIAFQIMDDYLDVFGDQEQFGKKHAGDIYENKKTVL 237
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+LA + GT+ E+ +V+ + I R + T + Y + A+
Sbjct: 238 YLLAKEHGTEEEQKELDYWYAKKTDNVDKVYSVEKIFRRTKVDEKTLHLIQKYNEIAQGY 297
Query: 298 LRCL--PDSSWKKSLMEVVDFCLQRLN 322
L + PD KK +E+ ++ L+R +
Sbjct: 298 LNRINVPD-EKKKPFVELANYLLRRES 323
>gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 349
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 155/313 (49%), Gaps = 4/313 (1%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + ++ + + + ++L+ +GGKR+RPM+TL V A
Sbjct: 37 ESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPYAV 96
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E H+ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V ++ A
Sbjct: 97 AAELTHSATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSA 156
Query: 130 L-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG
Sbjct: 157 ALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVG 216
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ AL +G +G+AFQLVDD LDY + +GK +G D GK TLP+I A +
Sbjct: 217 EIPAALVRFGEGIGVAFQLVDDALDYAADPGLLGKRLGTDLIEGKATLPLIRACEAEPSL 276
Query: 249 EKNFWKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
DG VE + + +++ + A + + A ++L +PD +
Sbjct: 277 RARLGGVV--DGTADVEAVAREVIEVVKRVGGVDAARALAREHTRSALEALEQVPDGVHR 334
Query: 308 KSLMEVVDFCLQR 320
++L +R
Sbjct: 335 RALHAAALQLTER 347
>gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
str. F0108]
gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
str. F0108]
Length = 325
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 14/329 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +++ L + + ++ ++++ GGKR+RP+L L
Sbjct: 4 LSTIRTPIHTELKDFIALFDESLTHKDGLLGQALEHVRAKGGKRMRPILILLMTKSFGKV 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A
Sbjct: 64 TSVAQYAAVGLELLHTASLVHDDVVDESGERRGQASVNASYNNKVAVLVGDYILSTALLN 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ T + + L+ + TL+ GE+ QL+ N + +EE Y VI+ KTA LF A +
Sbjct: 124 IARTNDCDIVCDLAELGRTLSNGEILQLTNIANTNFSEEVYFEVIRQKTAALFEACAVIG 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G +A +++G N+G+ FQ+ DD+ DY + +GK G D GK TLPV+
Sbjct: 184 AKAGGADRQAVEAARAFGRNVGVIFQIRDDIFDYYQSAD-LGKPTGNDMAEGKLTLPVLY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS-------YGQK 293
A + + +S E + + + N + E + + +
Sbjct: 243 ALNTTGDTQMAALARKVKARNVSAEEIAQLVEFTKNNGGIAYAEQKMAQCKVLTDGFINQ 302
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +L V F + R N
Sbjct: 303 YIA------QPQLQDALKAYVSFIIDRNN 325
>gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 354
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 15/330 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR----- 60
++ L +E+V + + D +L+ +GGKR+RP+LT+ +L+ +
Sbjct: 25 EVVLTALEQVEEQLDGALGFDDLFSDTAAHHLLAAGGKRVRPVLTVLASLLGDPALASGE 84
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
A +E H ATL HDDV+D++ +RRG AA +WGN ++L GD + ++
Sbjct: 85 VADVDAPARQAAVVMELTHLATLYHDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIFAR 144
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A ++ E + L +G+L + E Y V+ KT L +AA
Sbjct: 145 ASQLMAELGPRPVQIQADTFER-LVQGQLWETRGPAEGADPIEHYYAVLSGKTGSLIAAA 203
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +L+ G + Q + +YG +G+AFQL DD++D G+ +GK G D R PTL
Sbjct: 204 GMLGALLGGADEAAVQVMSAYGEKVGLAFQLADDLIDLTGDAERIGKVPGTDLRERVPTL 263
Query: 237 PVILAFQRGTKREK-----NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+L + ++ ++ + E L A + + A+ + +
Sbjct: 264 TTLLLARAAQGEGPEAEDARRVRALVDGPLDTDEQLTAAVAALTGHPAIDEAWAITRDWA 323
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++AK +L LPDS+ K +L D+ + R
Sbjct: 324 EQAKQALTPLPDSAVKTALEAFADYVVGRS 353
>gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
Length = 328
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 331
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 94/340 (27%), Positives = 160/340 (47%), Gaps = 31/340 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK----------------- 43
M L+ ++ ++N + + ++ V ++++ +GGK
Sbjct: 1 MLKLKAYLATELPRINKTLDAEVAVLHPLVRPVAEHVLRAGGKRLRPLLTLLTARALGAE 60
Query: 44 ---RLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
R + G + LAC++E +H+ATLLHDD++D + LRRG AA +
Sbjct: 61 GGGLFR-----------KSSGPDLYPLACSVELLHSATLLHDDILDGADLRRGLPAAHTM 109
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+G +VL GD LL+ A +V E ++ A GE+ +++ ++ D +
Sbjct: 110 FGQTETVLAGDALLALANRIVARYGDARLTETIAEAIVQTATGEIVEIAHQRSTDHGHDT 169
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
Y+ +I KTA + A+ E+ +L A + QA +G+NLGIAFQ+VDD LD+ +
Sbjct: 170 YIDIITGKTAWMLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKD 229
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK +G D R GK T P+I + T +E++ + + G + + +R
Sbjct: 230 TGKPVGGDLREGKLTPPLIYYLETLTPQERDAFVTRFRQGTFDDATVAEVAADLRARGCD 289
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
T A SY KA L LPD+ ++ L + +D+ L R
Sbjct: 290 AKTRQLAASYLDKASACLDALPDTPERRILRQSIDYVLNR 329
>gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus]
Length = 366
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L KD++ + I K + + ++ +Y GK RPM+ + A N
Sbjct: 48 QLGRKDLKNLYEDIKKELLVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSR 107
Query: 66 LLACAI-------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + E IHTA+L+HDDV+DD+ RRGK+ +WG + +VL GDF+LS A
Sbjct: 108 EVQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAAS 167
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 168 LALARIGNTTIISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK 227
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV
Sbjct: 228 AVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPV 287
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + + G ++++A + ++ + T Y A Y +A +
Sbjct: 288 LFACRQFPEMNAMIMRRFSKPG-----DVERARKYVLQSDGVQQTTYLAQRYCHEATREI 342
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L S +++L+++ + L R
Sbjct: 343 SKLRPSPEREALIQLTEMVLMR 364
>gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii]
gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii]
Length = 342
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 91/331 (27%), Positives = 153/331 (46%), Gaps = 25/331 (7%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------------ 57
M ++ + + ++V + +Y G GKR RPM+ L + L
Sbjct: 1 MAQLGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAATS 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + H LA E IH A+LLHDDV+D + RRG + + GN+ +VL GDFLL++A
Sbjct: 61 DEKNWRHHKLAEITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAGDFLLARA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ ++ E + +S V L GE+ Q ++ + + YL KTA L + +
Sbjct: 121 AFSLSTLQNDEVVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTFYKTASLIANSC 180
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++AG V YG +LG+A+QLVDD+LD+ G +GK D R G T P
Sbjct: 181 KCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGKPALSDLREGIATAP 240
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A E + I+ ++ A ++ + + T+ A + KA D+
Sbjct: 241 VLYAL-----EEHPALQELIDRKFKDPGDVDSALKMVLASSGIRKTKELAREHASKAADA 295
Query: 298 LRCLPD------SSWKKSLMEVVDFCLQRLN 322
+ P S +++L E+ + + R N
Sbjct: 296 VAGFPPTTSEKASLCRRALTELTEQVITRSN 326
>gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
Length = 334
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
+ ++ V +I + + + I DV+ +SGGK LRP L A + + + D
Sbjct: 19 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 78
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+
Sbjct: 79 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 138
Query: 125 KSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + L GEL Q+ N+ + +DYL I KTA LF A +
Sbjct: 139 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A +
Sbjct: 199 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + +S+ ++ ++ + A +Y QKA D + LP+
Sbjct: 259 QAPAAFAPY---LNKKAALSLAEAQEVADLVVRYGGVEKARAFAVTYTQKALDDIDLLPE 315
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K + + + LQR
Sbjct: 316 APSKAKIRSLTELLLQR 332
>gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
Length = 326
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
+ ++ V +I + + + I DV+ +SGGK LRP L A + + + D
Sbjct: 11 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 125 KSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + L GEL Q+ N+ + +DYL I KTA LF A +
Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A +
Sbjct: 191 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + +S+ ++ ++ + A +Y QKA D + LP+
Sbjct: 251 QAPAAFAPY---LNKKAALSLAEAQEVADLVVRYGGVEKARAFAVTYTQKALDDIDLLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K + + + LQR
Sbjct: 308 APSKAKIRSLTELLLQR 324
>gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
Length = 326
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
+ ++ V +I + + + I DV+ +SGGK LRP L A + + + D
Sbjct: 11 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 125 KSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + L GEL Q+ N+ + +DYL I KTA LF A +
Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A +
Sbjct: 191 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + +S+ ++ ++ + A +Y QKA D + LP+
Sbjct: 251 QAPAAFAPY---LNKKAALSLAEAQEVADLVVRYGGVEKARDFAVTYTQKALDDIDLLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K + + + LQR
Sbjct: 308 APSKAKIRSLTELLLQR 324
>gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
Length = 328
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 VQAKEQLYEITQTILTREN 328
>gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
Length = 335
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 3/306 (0%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFI 74
L+ + E++ D + +L +GGKR RP+ T+ +A + + + IE I
Sbjct: 30 EQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMI 89
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H ATL HDDV+D++ +RRG +A WGN ++L GD+LL+ A +V +
Sbjct: 90 HLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIAD 149
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
L G++R+ + + + YL V++ KT L AA + + +G + + L
Sbjct: 150 T-FAQLVTGQMRETRGTSENVDSIKQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERL 208
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
G +G AFQ+ DD++D E +E GK G D R G TLP++ A +
Sbjct: 209 SRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRA 268
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+++A ++R + + + Y +A+ L LPD +++L +V
Sbjct: 269 LLNGPVD-DDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALV 327
Query: 315 DFCLQR 320
D+ + R
Sbjct: 328 DYTVSR 333
>gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
tuberculosis H37Ra]
gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
F11]
gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
H37Ra]
gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
02_1987]
gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 1435]
gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
C]
gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
str. Haarlem]
gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 605]
gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
02_1987]
gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
210]
gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 4207]
gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN R506]
gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu001]
gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu002]
gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu003]
gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu004]
gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu005]
gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu006]
gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu008]
gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu007]
gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu009]
gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu010]
gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu011]
gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu012]
gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN V2475]
gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
H37Rv]
gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
AF2122/97]
gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
C]
gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
str. Haarlem]
gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
tuberculosis H37Ra]
gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
F11]
gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 1435]
gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 605]
gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
02_1987]
gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu001]
gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu002]
gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu003]
gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu004]
gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu005]
gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu006]
gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu007]
gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu008]
gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu009]
gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu010]
gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu011]
gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu012]
gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CDC1551A]
gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
W-148]
gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 4207]
Length = 335
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 3/306 (0%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFI 74
L+ + E++ D + +L +GGKR RP+ T+ +A + + + IE I
Sbjct: 30 EQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMI 89
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H ATL HDDV+D++ +RRG +A WGN ++L GD+LL+ A +V +
Sbjct: 90 HLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIAD 149
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
L G++R+ + + E YL V++ KT L AA + + +G + + L
Sbjct: 150 T-FAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERL 208
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
G +G AFQ+ DD++D E +E GK G D R G TLP++ A +
Sbjct: 209 SRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRA 268
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+++A ++R + + + Y +A+ L LPD +++L +V
Sbjct: 269 LLNGPVD-DDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALV 327
Query: 315 DFCLQR 320
D+ + R
Sbjct: 328 DYTVSR 333
>gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785]
gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 350
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 161/319 (50%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
T KDM +N +ILK + + ++ D +K S GK LRP + + +
Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIE 123
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSEN 152
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+S ++ A + GE Q + + N++++E++YL IK KT VLF A + +
Sbjct: 153 AQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGAYE 212
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G++ + K +G LG AFQL DD+LDY + + K + D ++G + P+I A Q
Sbjct: 213 SGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTLKKPVLLDVKDGIYSGPLIFALQ 272
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LP 302
+ + D ++ E L++ ++ + + + A + KA +L+ P
Sbjct: 273 NDSTGRLHELVKLGKD--LTKEQLQEIEKMVNDLGGVKRAQKLADKFTDKALHNLQKHWP 330
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D+ ++ L E+ + L+R
Sbjct: 331 DNKTRQQLEELTNILLKRS 349
>gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 443
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 95/370 (25%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----------- 56
K+M+ + I K + S + KY + GK +RP++ L +
Sbjct: 78 VAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATYLCPKAPPTA 137
Query: 57 -----------------------------------LEYRGD---NHVLLACAIEFIHTAT 78
L+ D + LA E IHTA+
Sbjct: 138 PTPTSRGIDTSISPVQILADVNPSAQPISAVETEVLDANSDILPSQRRLAEITELIHTAS 197
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALE 131
LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ +
Sbjct: 198 LLHDDVIDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNPEVVELLATVIA 257
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + R K + T YL KTA L S + ++L+
Sbjct: 258 NLVEGEFMQLKNTERDERNPKWSEETVSYYLQKTYLKTASLISKSCRAAALLGNSDPVTV 317
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ A+++ +
Sbjct: 318 DAAYSYGRNLGLAFQLVDDLLDYTQSGTDLGKPAGADLELGLATAPLLFAWKQMPELGA- 376
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ ++++A ++ ++ + T A Y KA S+ P+S K L+
Sbjct: 377 ----LVGRKFEKEGDVERARELVLQSDGIEQTRALAQEYVDKAIASIAEFPESEAKDGLI 432
Query: 312 EVVDFCLQRL 321
E+ L+R
Sbjct: 433 EMAHKSLKRQ 442
>gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
Length = 323
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/309 (22%), Positives = 143/309 (46%), Gaps = 8/309 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+ + + + D +++ GGKR+RP+L++ + + + + A+E H TL
Sbjct: 17 KEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFHVGTAVELFHNFTL 76
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC- 138
+HDD++D + LRR + ++G+ ++L GD +L + + + + + + ++
Sbjct: 77 VHDDIMDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKVQPHYKQKLITAFNKA 136
Query: 139 ----TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ + V +DY+ +I KT+VL +A+L++ ++I G + +Q +
Sbjct: 137 AIEVCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLLAASLQMGAIIGGGSDYNQQHI 196
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G N+GIAFQ+ DD LD G+ + GK G D K T ++ A + + K
Sbjct: 197 YEFGKNIGIAFQIQDDYLDAFGDPEKFGKQQGGDILVNKKTFLLLKALELCNPAQHQKLK 256
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEV 313
+ + + + + + + E + Q A + L + SS K L+E+
Sbjct: 257 ELLATSP--DDKVNQVLELFHDCKVDAWAEKEKDRFQQLAFEHLESIAVLSSRKAPLVEL 314
Query: 314 VDFCLQRLN 322
+F L R +
Sbjct: 315 ANFLLNREH 323
>gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote
Alv-FOS1]
Length = 352
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/345 (17%), Positives = 127/345 (36%), Gaps = 26/345 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALML 57
M + + + K+ + ++ + ++ GGKR+R +L + M
Sbjct: 9 MDKYKSKIEDTLSEFFE--KKKTEVNHPLLREAVEIIEEYTLRGGKRVRALLMILGYRMY 66
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--------SVLV 109
+ D + A +E + + L+HDD++D+S LRRGK ++ +
Sbjct: 67 GGKDDEIIKAAATLELVQSYFLIHDDIMDESDLRRGKKTVHKIYEEEHLHRGFPGNPARF 126
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
G+ L A + + E + + + D + +
Sbjct: 127 GENLGIIAGDLANVYAFEIFAETEFDSDRKERALQELERIMEYTGYGQLIDVYSSMLPEF 186
Query: 170 AVLFSAALEVSSLIAGVQNSV-----------RQALKSYGMNLGIAFQLVDDVLDYRGEV 218
L ++L+ + + +GIAFQL DD+L G+
Sbjct: 187 GEKDLLLLHEYKTANYTIYGPLALGAILAGAEPESLRDFAIPIGIAFQLQDDILGLFGDE 246
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
++GK + D GK TL +I A + E+ + + +++E L + I+
Sbjct: 247 KKIGKPVTSDLAEGKKTLLIIKALENANDEERKEILEALGNPAVTIEQLMRVREIVEHTG 306
Query: 279 ALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLMEVVDFCLQRL 321
+L + A + +L + P+ ++ L+ + ++ ++R
Sbjct: 307 SLEYSRSMAEKLVNEGIAALEKIAVPNREYRDILVGMAEYMIRRT 351
>gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 989
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ L L M ++ L + +D ++ VV+ ++ GKR+R + +A +
Sbjct: 665 MRTLRVLLEDGMSVLDQNFQLDQTVADPALVQQVVRQILSLPGKRIRALCVYLSACVGRR 724
Query: 60 R-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A A+E +H A+LLHDDV+D + RR + ++ +V+GN S+L G+FL+ QA
Sbjct: 725 SYPQAAENIALAVELVHAASLLHDDVIDLAPQRRHQPSSNMVYGNAASILGGNFLVVQAA 784
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+++ T L + E QL + + E YL++I+ KTA LF +
Sbjct: 785 QLLLNTGRPGLAADLLRAVEAMILSESEQLENRGQVILNPEQYLNIIRGKTATLFRWGCQ 844
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ I+ +V +AL YG NLG+AFQL+DD+LD GE +GK++ D +G T P
Sbjct: 845 AGASISNHPAAVVEALARYGENLGMAFQLIDDLLDVIGEGTLLGKDLYRDLADGVITYPF 904
Query: 239 ILAFQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++A Q K + N + S K ++ + +A+ +T A +Y ++A+
Sbjct: 905 LVATQENPKICSELKMALSNPEHLQSASTQLKIKELVMQTQAIAETRALAAAYIEQAQAE 964
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L +P + +L + + L+RL
Sbjct: 965 LDRVPWGPARDTLNALAEVSLERL 988
>gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
Length = 328
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
Length = 319
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 5/310 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E + + + S+VE + + + L+ +GGKR+RP L + L + LA A+
Sbjct: 14 LEAFELRLREVVRSEVEFVRLIEEDLVTAGGKRVRPRLVFLASNALGGVP-YAMELALAV 72
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H+A+LLHDD+VDD+ RRGK AA +GN SVL GD+LLS+ ++ +T E +
Sbjct: 73 ELLHSASLLHDDLVDDAETRRGKEAAFRKYGNAVSVLSGDYLLSRLMALLAQTGRMELVA 132
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ A L+E E+ Q ++ D + E+Y +I KTA + A E ++++ + R
Sbjct: 133 MFAETARQLSEAEVLQFQVAALHDYSLENYERIIDGKTASVMRVACEGAAVLGDAPPAER 192
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL +G G AFQ+ DD LD G +GK G D R GK TL + +
Sbjct: 193 EALARFGSFYGQAFQMRDDYLDLMGTAEVLGKPAGGDVREGKVTLITLRL----LEAYPE 248
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ ++ + + + A ++ + +A +LR LP S+++ L
Sbjct: 249 EVGAIFKRRAAKPGDIARLQELAVRSGADLEVTEAIAARVDRAIAALRALPHSAYRDELE 308
Query: 312 EVVDFCLQRL 321
+ L R+
Sbjct: 309 ALARRELVRI 318
>gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG]
gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG]
gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
Length = 328
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 452
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 151/375 (40%), Gaps = 60/375 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
+ L + K+M+ + I K + S + KY + GK +RP++ L +
Sbjct: 83 IDPLR-IVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATSLC 141
Query: 59 ---------------------------------------------YRGDNHVLLACAIEF 73
+ LA E
Sbjct: 142 PKAPQRQQATAQVSAAIDTSISPPSILSDFNPSAGTESEPVLADAGILPSQRRLAEITEL 201
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-- 131
IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + E +E
Sbjct: 202 IHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELL 261
Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L + R + + + YL KTA L S + ++L+ G
Sbjct: 262 ATVIANLVEGEFMQLKNTARDETNPQWSEDALTYYLQKTYLKTASLISKSCRAAALLGGA 321
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 322 DAQTVDAAYSYGRNLGLAFQLVDDLLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMP 381
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + ++ +A ++ ++ + T A Y +KA SL PDS
Sbjct: 382 ELGA-----LVGRKFANDGDVARARDLVMQSDGIQQTRTLAEDYAEKAIASLSLFPDSEA 436
Query: 307 KKSLMEVVDFCLQRL 321
K L+E+ LQR
Sbjct: 437 KDGLVEMAVKTLQRK 451
>gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
Length = 323
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E+V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ L
Sbjct: 128 EMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
G K + +N+G + + + +T A Y + A +L +
Sbjct: 248 NDGNKDKLLEDIKGLNNGGNEQD----IIDYVIAQGGIDNTLAVADKYCKDALAALAAVR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V+ R
Sbjct: 304 DFPGKEFLVMAVENLADRK 322
>gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54]
gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 336
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
Query: 14 KVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+VN I + I S ++ D+++Y + SGGKR+RP+L L A + G LA
Sbjct: 17 QVNRYIAEDIALLRGSMEPLLCDILEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLAT 76
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E++H ATL HDD++D S LRRG+ + +G + ++L GDFL ++A V E E
Sbjct: 77 GFEYLHAATLFHDDIIDHSDLRRGQESIAKKFGMEAAILAGDFLHTRAMIFVGEMVGAEG 136
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L + +GE QL ++ +++E DY + KT VL +AA E+ +L G +
Sbjct: 137 LRRFGKATSAMVDGEFLQLRNAQEYNISELDYYRAVMGKTGVLIAAACELGALYGGGSEA 196
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LAFQRG 245
AL+SYG LG AFQ+VDD+LDY+G+ GK +G D GK TLP+I A +RG
Sbjct: 197 EIAALRSYGEKLGSAFQIVDDLLDYQGDTALTGKAVGNDLAEGKMTLPLILALSQAKKRG 256
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + D + E+ + + + + A + A L
Sbjct: 257 DTPAVCRVEKILADENLRAESFTEISAFIEKYNGFAEARDHAEADISFACQQLHIFKSRD 316
Query: 306 WKK---SLMEVVDFCLQRL 321
+ L+ + + L R
Sbjct: 317 IQDEMNLLVGLGHYILSRK 335
>gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
Length = 330
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 10/331 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M++ + ++ L+ + + + + + V+Y++ GKR+RP+L + A
Sbjct: 1 MEVTRQEAAAQVARLRRLVEQALPGLVEATREPAELYEPVRYVLSGTGKRMRPVLLMLAA 60
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ ++ + A A+E H TL+HDD++D +A RRG+ + W T++L GD+L+
Sbjct: 61 ELYGRPAESVLPAALAVEVFHAFTLVHDDIMDHAAERRGRPTVHVQWDEATALLCGDYLM 120
Query: 115 SQAFCMVIETKSQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ ++ + ++ + L EG+ + V+ +YL ++ KT+
Sbjct: 121 GLSYALLGQVENAPLARVLAMFHRMVERLCEGQALDKAFETRAHVSVAEYLQMVDGKTSA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L L++ L+ G + QAL+ G NLG AFQ+ DD+LD + GK IG D
Sbjct: 181 LLELCLQLGGLLGGAGEADLQALEQLGRNLGRAFQIQDDLLDLTATSPQWGKPIGADLME 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T PV+ A ++ + E+ +++ + E + +A + L Y
Sbjct: 241 GKKTFPVLAALEQASDGERVWFEERLRRRFR-PEEVPEARQRLERLGGLEAARRAVDRYL 299
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A+ +L LPD ++L +D QR +
Sbjct: 300 QEARAALAQLPDRPPAQALAWFLDQLAQRRH 330
>gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi]
gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi]
Length = 449
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+TL A L Y +
Sbjct: 129 ILDDELKYFYDDVRDLLQSGTSQPELDTIACYYFDGQGKALRPMVTLLMAKALNYHLNNE 188
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 189 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 248
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 249 ASIMISRLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 308
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 309 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 368
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 369 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 423
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 424 LAQELTESPYQKGLQVVADLVINRM 448
>gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803]
gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803]
Length = 324
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 145/321 (45%), Gaps = 8/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ E + + ++I + + + Y++ GGKRLRP+L L + + +
Sbjct: 4 ISQYREAIIDYLHEKIKVKEPANLYEPMVYILEQGGKRLRPVLVLMATEIFDCNYKKALD 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A AIE H +L+HDD++DD+ LRRGK W T +L GD +L A+ + +
Sbjct: 64 AALAIEIFHNFSLVHDDIMDDAPLRRGKETVHEKWDINTGILSGDAMLINAYQLFESYEG 123
Query: 127 QEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + A + EG+ + +V+ E+YL +I+ KTAVL A+L++ +++
Sbjct: 124 DTFKELSKLFTKTAIEVCEGQQYDIDFETRDNVSIENYLKMIEYKTAVLVGASLQMGAIV 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + ++A+ YG LGIAFQL DD LD G+ GK +G D K T + +
Sbjct: 184 AQTSTACKEAIYQYGRLLGIAFQLQDDYLDAFGDPETFGKQLGGDIIENKKTFLYLKTLE 243
Query: 244 RGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-- 300
T+ E + + + ++ + + A T Y KA L
Sbjct: 244 LATRNEALQLEHLYSISPIENSGKIEAVKSLFESSGAAELTRKEIQVYTDKAFKILEKIQ 303
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP+ K L + ++R
Sbjct: 304 LPE-EKKGPLRNFGEMLMERQ 323
>gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta
2897]
Length = 347
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 4 LEDLTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
D T + M+ V ++ S + ++ +L SGGKR+RP+L L A E D
Sbjct: 22 FRDRTAQRMQAVEKRLVDVAADSPDPRVGELTGHLAVSGGKRMRPLLVLLGAEFGEEWRD 81
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A E +H ++L HDDV+D +ALR G +A WG + +V GD+LL++ +
Sbjct: 82 GVVDAAVIAELVHISSLYHDDVMDGAALRHGVPSANARWGERLAVAGGDWLLAR-AARLA 140
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + VA L EG+L +++ + + + V KTA L + AL +L
Sbjct: 141 AALGPDMVRFNADVAGDLVEGQLLEMTGPAEGEDPVQHFFRVTSGKTAALLAMALGAGAL 200
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG ++L YG LGIAFQ+ DD+LD E GK G+D G +LPV+LA
Sbjct: 201 QAGAPAGQGRSLMEYGHQLGIAFQISDDLLDLVAPAEETGKEQGKDLAAGVLSLPVLLAV 260
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + ++A + R + A E A+ +L LP
Sbjct: 261 SGTGPADAELRDLLEAGPLDDLARRRRALELFRSSGAPAAAEQHLRERLALARSALHDLP 320
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ +++L + D+ R++
Sbjct: 321 VCAGRRALDALCDYVGTRVS 340
>gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus
torquis ATCC 700755]
gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus
torquis ATCC 700755]
Length = 324
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 10/321 (3%)
Query: 11 DMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
D+E L+ + + V + + ++Y++ GGKRLRP+L L +A + + +
Sbjct: 3 DLEAYKLSFLEYMEAQVPKKEPRNLYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAM 62
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE H +L+HDD++DD+ LRRG+ W T +L GD +L A+ +
Sbjct: 63 DAALAIEIFHNFSLVHDDIMDDAPLRRGQQTVHEKWNINTGILSGDAMLINAYQLFENYP 122
Query: 126 SQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ + A + EG+ + + DVT E+YL +I+ KTAVL AAL++ ++
Sbjct: 123 AEHFKPLAELFTKTAIEVCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGAALKMGAI 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++ V +V+ + +G LGIAFQ+ DD LD GE GK IG D K T + A
Sbjct: 183 LSDVSQNVQNKIYEFGRLLGIAFQIQDDYLDTFGEQAVFGKQIGGDIIENKKTYLYLRAL 242
Query: 243 QRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + K + ++ A I ++ A T + Y + A L +
Sbjct: 243 ELADQSSAEQLKHLYTISPENPSNKIETAKQIFEDSGAGKATTAKIKEYTEIAFGRLDDI 302
Query: 302 P-DSSWKKSLMEVVDFCLQRL 321
K L++ + R
Sbjct: 303 EVPQKGKDFLIQFGTNLMNRK 323
>gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1]
Length = 444
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 94/377 (24%), Positives = 149/377 (39%), Gaps = 62/377 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+ L K+M+ + I K + S + KY + GK +RP++ L +
Sbjct: 73 IDPLRS-VAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATYLC 131
Query: 58 -------------EYRG---------------------------------DNHVLLACAI 71
+ LA
Sbjct: 132 PKTPATVPTVTHRGVDTSLSPAQILADVNPAAHPLSSPEQEIADANSDILPSQRRLAEIA 191
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---- 127
E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++
Sbjct: 192 ELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNPEVVE 251
Query: 128 ---EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ L + R K + T YL KTA L S + ++L+
Sbjct: 252 LLATVIANLVEGEFMQLKNTERDERNPKWSEETVTYYLQKTYLKTASLISKSCRAAALLG 311
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
A SYG NLG+AFQLVDD+LDY +++GK G D G T P++ A+++
Sbjct: 312 NTDAVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGSDLGKPAGADLELGLATAPLLFAWKQ 371
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++++A ++ ++ + T A Y KA S+ P+S
Sbjct: 372 MPELGA-----LVGRKFAQEGDVQRARELVLQSDGIEQTRALAQDYVDKAIASIADFPES 426
Query: 305 SWKKSLMEVVDFCLQRL 321
K L+E+ L+R
Sbjct: 427 EAKDGLIEMAHKSLKRQ 443
>gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 349
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 155/313 (49%), Gaps = 4/313 (1%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + ++ + + + ++L+ +GGKR+RPM+TL V A
Sbjct: 37 ESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPYAV 96
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E H+ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V ++ A
Sbjct: 97 AAELTHSATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSA 156
Query: 130 L-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG
Sbjct: 157 ALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVG 216
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ AL +G +G+AFQLVDD LDY + +GK +G D GK TLP+I A +
Sbjct: 217 EIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKRLGTDLIEGKATLPLIRACEAEPAL 276
Query: 249 EKNFWKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
DG VE + + +++ + A + + A ++L +PD +
Sbjct: 277 RGRLGGVV--DGTADVEAVAGEVIAVVKRVGGVDAARALAREHTRTALEALEQVPDGVHR 334
Query: 308 KSLMEVVDFCLQR 320
++L +R
Sbjct: 335 RALHAAALQLTER 347
>gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens]
Length = 376
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 14/319 (4%)
Query: 10 KDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-- 66
+D++ + I K + S E + ++ +Y GK RP++ + A +N
Sbjct: 62 RDLKGLYEGIRKEPLISTTE-LKEISEYYFDVKGKAFRPIIVVLMARACNIHHNNSRHVQ 120
Query: 67 -----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 121 ASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIAL 180
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L+ V L GE QL +N + YL KTA L + + + S
Sbjct: 181 ARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVS 240
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 241 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 300
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 301 CQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKL 355
Query: 302 PDSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 356 RPSPERDALIQLSEIVLTR 374
>gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
Length = 335
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 3/306 (0%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFI 74
L+ + E++ D + +L +GGKR RP+ T+ +A + + + IE I
Sbjct: 30 EQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMI 89
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H ATL HDDV+D++ +RRG +A WGN ++L GD+LL+ A +V +
Sbjct: 90 HLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIAD 149
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
L G++R+ + + E YL V++ KT L AA + + +G + + L
Sbjct: 150 T-VAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERL 208
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
G +G AFQ+ DD++D E +E GK G D R G TLP++ A +
Sbjct: 209 SRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRA 268
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+++A ++R + + + Y +A+ L LPD +++L +V
Sbjct: 269 LLNGPVD-DDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALV 327
Query: 315 DFCLQR 320
D+ + R
Sbjct: 328 DYTVSR 333
>gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
Length = 349
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + ++ + + + ++L+ +GGKR+RPM+TL V A
Sbjct: 37 ESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPYAV 96
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E H+ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V ++ A
Sbjct: 97 AAELTHSATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSA 156
Query: 130 L-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG
Sbjct: 157 ALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVG 216
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ AL +G +G+AFQLVDD LDY + +GK +G D GK TLP+I A +
Sbjct: 217 EIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKRLGTDLIEGKATLPLIRACEAEPAL 276
Query: 249 EKNFWKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ DG VE + + +++ + A + + A ++L +PD +
Sbjct: 277 RERLGGVV--DGTADVETVAGEVIAVVKRVGGVDAARALAREHTRTALEALEQVPDGVHR 334
Query: 308 KSLMEVVDFCLQR 320
++L +R
Sbjct: 335 RALHAAALQLTER 347
>gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+]
gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+]
Length = 454
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 97/371 (26%), Positives = 151/371 (40%), Gaps = 61/371 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+M+ + I K + S + KY + GK +RP++ L +
Sbjct: 88 IVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATSLCPKAPQR 147
Query: 57 --------LEYRG-------------------------------DNHVLLACAIEFIHTA 77
+ + LA E IHTA
Sbjct: 148 QQATLQASMGIDSSISPLSVLSDFNPSATAVAPEAETNDHPDILPSQRRLAEITELIHTA 207
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE------ 131
+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + E +E
Sbjct: 208 SLLHDDVIDHSESRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELLATVI 267
Query: 132 -ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L + R + + T YL KTA L S + ++L+ G +
Sbjct: 268 ANLVEGEFMQLKNTARDERNPQWSEETLTYYLQKTYLKTASLISKSCRAAALLGGSDAAT 327
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++ +
Sbjct: 328 VDAAYAYGKNLGLAFQLVDDMLDYTRSEQELGKPAGADLELGLATAPLLFAWKTMPELGA 387
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ ++ +A ++ ++ + T A Y QKA D++ PDS K L
Sbjct: 388 -----LVGRKFEKEGDVVRARDLVAQSDGIEQTRALAEDYAQKAIDAIAPFPDSEAKDGL 442
Query: 311 MEVVDFCLQRL 321
+E+ L+R
Sbjct: 443 IEMAVKTLKRK 453
>gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus]
Length = 407
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 93 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 152
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 153 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 212
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 213 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 272
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 273 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 332
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 333 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 387
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 388 PSTERDALIQLSESVLTR 405
>gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
Length = 347
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 18/336 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +L+ L+ K ++ + K + + D V Y I +GGKRLRP+LTLA A +
Sbjct: 14 MDVLDRLSEKYGPRIEEALAKYLLRDAADDFKDAVLYQISTGGKRLRPILTLAVAEAVSG 73
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A +E IH +L++DD++D +RR K R +G+ ++L+G +
Sbjct: 74 NYERALPAAAIVELIHNYSLIYDDIIDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIEE 133
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQ-------------LSLSKNLDVTEEDYLHVIK 166
V++T + R ++ V +DY+ ++
Sbjct: 134 AVLDTPKPSEFAREVAKVIKAIDEGERLDILFELAGRDDPYFVKARWPSVKLDDYIRMVG 193
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L +AA + ++ + A +GMN GIAFQ+VDDVLD G+ + GK IG
Sbjct: 194 LKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFGDPKKFGKEIG 253
Query: 227 EDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+D + K + V+L + +R + S ++ +S E+ ++ I+ A
Sbjct: 254 KDIKEHKRGNIVVLLGLEELDERLRGELLSILSKPTVSDEDARRGVRILEGTNAKERALA 313
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y ++A SL +P S K L E+ F +QR
Sbjct: 314 LADKYRERALASLSKMPHS---KDLEELAAFIVQRQ 346
>gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
Length = 325
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 4/316 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ LI K+I ++ + + +I GGK LRP L + + + + L
Sbjct: 13 LAPELASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIAL 72
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S RR +V + +G T+V GD+L F ++ S
Sbjct: 73 AAAIETLHTATLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASS 132
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ S + +GEL Q++ +T DYL + KT LF+ + + + +G
Sbjct: 133 LRSIQQDSGSMEKILKGELDQMATRYQTQITINDYLKQVSGKTGQLFALSCFIGAYESGG 192
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + GMN+GIAFQL+DD+LDY + +GK + ED R+G + P+ILA QR
Sbjct: 193 TTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGKPVYEDVRSGVYSAPLILAMQR-- 250
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F + IS + + ++ + + A A L+ LP +
Sbjct: 251 -DRQAFLPLLVKKEHISDTEMIQLRDLVIKYEGVKQAYTMAQQRTDLATAGLQKLPAGAA 309
Query: 307 KKSLMEVVDFCLQRLN 322
+ L+ + + L+R +
Sbjct: 310 RDDLIRLTESLLKRKS 325
>gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e]
gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes FSL R2-561]
gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes 10403S]
gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes J0161]
gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes J2818]
gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J2-003]
gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e]
gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes J2818]
Length = 321
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATAL-MLE 58
+ L KD++ V + K + +L+ +GGKR+RPM +A
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAAN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKTGA-KQAEDVATTYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 323
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E+V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ L
Sbjct: 128 EMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMIKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
G K + +N+G + + + +T A Y + A +L +
Sbjct: 248 NDGNKDKLLEDIKGLNNGGNEQD----IIDYVIAQGGIDNTLAVADKYCKDALAALAAVR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V+ R
Sbjct: 304 DFPGKEFLVMAVENLADRK 322
>gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
Length = 338
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 87/326 (26%), Positives = 157/326 (48%), Gaps = 9/326 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
+ +++V +I+ + S +E + V ++L +GGKR RPM T+ + + R
Sbjct: 15 DAFTESVRASLDRVESIIIAEVESGIEAMAAVAEHLAKAGGKRFRPMFTVVAGQLGADER 74
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A A+E IH ATL HDDV+D++ +RRG +A + WGNQ ++L GD+L ++A +
Sbjct: 75 RGDVEIAASALELIHLATLYHDDVMDEATMRRGVPSANVQWGNQIAILAGDYLFARACGL 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + S+ L G+L+++ ++ E YL VI KTA L A ++
Sbjct: 135 IAKLGSEATSIVAQTFGE-LVTGQLQEVLGAQGERDKIEHYLTVIFGKTASLLGACGRLA 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L V+ L G +G+AFQ+ DD++D + GK G D R G TLP++
Sbjct: 194 GLAIRADRQVQDQLAVIGELVGMAFQIADDIIDIGSGSADSGKTPGTDLREGVLTLPMLY 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + + + +A ++ + + + + Y ++A + +
Sbjct: 254 ALEAQGED--RLNEILSSGPVADEAVVAEALGLLAVSSGMARAKEKVADYARRADEEIGK 311
Query: 301 LPDS-----SWKKSLMEVVDFCLQRL 321
LPDS K +L +V + R+
Sbjct: 312 LPDSFERAAEVKTALRALVRAAVDRV 337
>gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
705]
gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
705]
gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
Length = 325
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 4/316 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ LI K+I ++ + + +I GGK LRP L + + + + L
Sbjct: 13 LAPELASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIAL 72
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S RR +V + +G T+V GD+L F ++ S
Sbjct: 73 AAAIETLHTATLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASS 132
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ S + +GEL Q++ +T DYL + KT LF+ + V + +G
Sbjct: 133 LRSIQQDSGSMEKILKGELDQMATRYQTQITINDYLKQVSGKTGQLFALSCFVGAYESGG 192
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + GMN+GIAFQL+DD+LDY + +GK + ED R+G + P+ILA QR
Sbjct: 193 TTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGKPVYEDVRSGVYSAPLILAMQR-- 250
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F IS + + ++ + + A + A L+ LP +
Sbjct: 251 -DRQAFLPLLAKKEHISDTEMIQLRDLVIKYEGVKQAYTMAQQRTELATAGLQKLPAGAA 309
Query: 307 KKSLMEVVDFCLQRLN 322
+ L+ + + L+R +
Sbjct: 310 RDDLIRLTESLLKRKS 325
>gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 325
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 2/322 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEY 59
++ + + ++ ++ ++ + + GK +RP+L L +L +
Sbjct: 4 IEQIVQPIEDYRLAFEEEYAQAFVTESSIVAQSIEKITATRGKHIRPILMGLLVSLQGKE 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +E +H A+L+HDDV+D + LRRGK +GN ++VLVGD++LS AF
Sbjct: 64 PNQRTISCAVLLEMLHMASLIHDDVIDQAPLRRGKPTLNAFYGNHSAVLVGDYILSIAFL 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
E + ++ + L+EGEL Q+ ++ + E++Y +I+ KTA LF A +
Sbjct: 124 RAAEIGGSSLIRTVANLGKHLSEGELLQIQVATERIIDEKNYFSIIEKKTATLFEACAAL 183
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + G +LGIAFQL DD+ DY E GK +G D + GK TLP+I
Sbjct: 184 GMYSIDAKPEELLKMTQLGKHLGIAFQLRDDIFDYTKESEV-GKPVGNDLKEGKITLPLI 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + K K+ ++ + + + + + + + R KA LR
Sbjct: 243 YVYNQADANLKEQIKNLLDKVESDEKAIADLLQMAHQFGGIDYAQKRLEEELSKALTILR 302
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
P+S SL+ + ++ +R
Sbjct: 303 SFPNSPANNSLVLLTEYLGKRT 324
>gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta]
gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta]
Length = 436
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ D++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 175
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 176 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 235
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 236 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 295
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 296 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 355
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 356 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 410
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 411 LAQELTESPYQKGLQVVADLVINRM 435
>gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 346
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 78/328 (23%), Positives = 137/328 (41%), Gaps = 24/328 (7%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATAL----------------M 56
+VN I + + + + + + +YL+ +GGKRLRP + L A
Sbjct: 20 QVNDAIPENLPVVEPKKLYEASRYLLDAGGKRLRPTILLLVAESIADVLPRSEPYREFPA 79
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
E D + A +IE I + TL+HDD++DD +RRG A + T++L GD L ++
Sbjct: 80 AEGPID-MMSAAVSIEIIQSFTLIHDDIMDDDDMRRGVPAVHREFDLSTAILAGDTLYAK 138
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE----EDYLHVIKSKTAVL 172
AF ++ET S +L ++ + T+ + + +
Sbjct: 139 AFENMLETGSTGDRSVRALSELATTCTQICEGQSMDIEFETDETVTTEDYLEMVELKTAV 198
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA I ++ L YG+N+G FQ+ DD+LD ++GK G D
Sbjct: 199 LYAAAASIPPILMGEDDYVDPLYQYGLNIGRGFQIQDDLLDLTTPSEKLGKQRGSDLVEN 258
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T+ + A +G E ++ + + +A + E ++ A +
Sbjct: 259 KRTIITVHARNQGVDVENLVPTDDVDA--VDEATIDEAVAELEEAGSIDFARETAEGLIR 316
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K +L LPD+ + L + DF ++R
Sbjct: 317 DGKRNLEVLPDNESRDLLEGIADFLIER 344
>gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
Length = 445
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 125 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 184
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 185 SHQLVHKQRQVALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 244
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 245 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 304
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 305 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 364
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 365 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 419
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + RL
Sbjct: 420 LAQELTESPYQKGLQVVADLVINRL 444
>gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus]
gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1; AltName: Full=Solanesyl-diphosphate synthase
subunit 1; AltName: Full=Trans-prenyltransferase 1;
Short=TPT 1
gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus]
gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
Length = 409
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 95 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 154
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 155 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 214
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 215 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 274
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 275 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 334
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 335 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 389
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 390 PSTERDALIQLSESVLTR 407
>gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 321
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 166/322 (51%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A ++
Sbjct: 3 LNFLYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLVPT 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFEMVRDASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSNVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G S + L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV
Sbjct: 183 LGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPV 242
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A + +++ + + + + + +++ A E A +Y +KA +L
Sbjct: 243 FFAMEDSFLKKRISQVTEETEAEEIAALVAE----VKKTGA-KKAEDVATAYLKKALATL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi]
gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi]
Length = 437
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 87/329 (26%), Positives = 153/329 (46%), Gaps = 15/329 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K + D++ + IL + SD ++ KY + GK RPML L T + +
Sbjct: 112 KTISLQVDGDLKLIGEEILDSVKSDHPVLDAAAKYFFNTPGKLFRPMLVLMTGRAVNEQT 171
Query: 62 D---------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ LA E IH A+L+HDD+VDD+ RRG A GN+ +VL GDF
Sbjct: 172 EISDLETIMRKQRKLAETTELIHVASLIHDDIVDDADTRRGIPALNKNVGNKVAVLAGDF 231
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL +A + + E+++ +S V LA GE+ Q++ + + Y+ I KT+ L
Sbjct: 232 LLGRASINLARIGNIESIDLISTVIEHLAYGEVLQMAGKG--KLDFDYYMKTIFFKTSSL 289
Query: 173 FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + + S++++G N A ++G ++GIA+QL DD LD+ N++GK
Sbjct: 290 IANSCKASAVLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGKPSQGADMK 349
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T I+ + K I+ +++ A + ++ A+ T+ A ++
Sbjct: 350 LGLTTCPIIFAAQAFPE---QMKPIIDRKFSGEGDIEMARNFVIKSNAVQSTKDLADTHT 406
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A D++ S + L+E++ R
Sbjct: 407 RMAYDAVMKFKPSPVRSVLLELLYKISLR 435
>gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 243
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 143/220 (65%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ DME VN +I +++ S+V ++ + +Y+I +GGKR+RP L L A Y G +H
Sbjct: 14 TQVIASDMEAVNLVIRRQLHSEVALVNQIAEYIISAGGKRIRPALVLLMARAFGYNGTHH 73
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
LA +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDF+ S+AF M++
Sbjct: 74 HDLAAVVEFIHTATLLHDDVVDESSLRRGRQTANALFGNAASVLVGDFVYSRAFQMMVSV 133
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ LS +AEGE+ QL + DVTE YL VI+SKTA LF AA ++ +L+A
Sbjct: 134 DDMRVMRILSDATNVIAEGEVLQLLNMHDPDVTEARYLQVIRSKTAKLFEAAAQLGALVA 193
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
G +A YG +LG AFQL+DDVLDY G +++GKN
Sbjct: 194 GASAEDVEAAAEYGRSLGTAFQLIDDVLDYSGNASDIGKN 233
>gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
21211]
gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
21211]
Length = 316
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 5/310 (1%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71
+ + + + S VE I + L+ +GGKR RP LT L +A A+
Sbjct: 10 DAFEARLREVLRSQVEFIELIGDDLVTAGGKRTRPALTYLAFRALGLDAHPQEHDVAVAV 69
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H+A+LLHDD++DD+ RRG A +GN SV+ GD++LS+ +++ + + +
Sbjct: 70 ELLHSASLLHDDLIDDADTRRGAPTAFRRFGNVVSVMSGDYMLSK-LLVLLASTTPGLVR 128
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A A + EGE+ Q ++ + + E YL+VI KTA L A +L+ G ++ +
Sbjct: 129 AFGETAAHVCEGEVLQFQVAAYGEYSHEHYLNVIYGKTAALVELAASAPALLVGASDAHQ 188
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL +G G+AFQ+ DD+LD G +GK +G D R GK TLP++ + +
Sbjct: 189 RALADFGREYGMAFQMQDDLLDLAGTEALIGKPVGGDLREGKATLPILYL---LEGPDGD 245
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ + ++ + + A+ T +A +LR LP S + L
Sbjct: 246 EVRAILERRAAHEGDVDRVRALAFAQGAVDRTRAAIQDRALRAVTALRALPASPARDRLE 305
Query: 312 EVVDFCLQRL 321
R+
Sbjct: 306 AFAAQAADRV 315
>gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
Length = 274
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 108/273 (39%), Positives = 165/273 (60%), Gaps = 1/273 (0%)
Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
M+ + A L + G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SV
Sbjct: 1 MIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASV 60
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
LVGDF+ ++AF +V + +S + L ++ LAEGE++QL + + +E +Y+ VI S
Sbjct: 61 LVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYS 120
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA LF A + ++++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+
Sbjct: 121 KTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGD 180
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GKPTLP++ A + G ++ + I G E + + IM E+++L RA
Sbjct: 181 DLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGGK-REAIDEVLAIMTEHKSLDYAMNRA 239
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
QKA D++ LP+S +K++L+ + + R
Sbjct: 240 KEEAQKAVDAIEILPESEYKQALISLAYLSVDR 272
>gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
VaMs.102]
gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
VaMs.102]
Length = 451
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 91/369 (24%), Positives = 145/369 (39%), Gaps = 60/369 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----------- 56
K+M+ + I + S + V KY + GK +RP++ L A
Sbjct: 87 VAKEMKFLTGNIRNLLGSGHPALEKVAKYYTHAEGKHIRPLVVLLMARATALCPKAERQA 146
Query: 57 --------------------------LEYRG-----------DNHVLLACAIEFIHTATL 79
+ LA E IHT++L
Sbjct: 147 PTQTYAGINSPISPDGILSDVNPTSPFTGPPLDPQQSNSDILPSQRRLAEITELIHTSSL 206
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------A 132
L DDV+D S RRG +A L + N+ +VL GDFLL +A + + E +E
Sbjct: 207 LRDDVIDHSVSRRGSPSANLEFSNKMAVLAGDFLLGRASVALARLRDAEVIELLATVIAN 266
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L + + + YL KTA L S + S+L+ + +
Sbjct: 267 LVEGEFMQLKNTAQDERNPAWSQEAVDYYLRKTYLKTASLISKSCRASALLGNADAATVE 326
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A +YG NLG+AFQLVDD+LDY ++GK G D G T P++ A++ +
Sbjct: 327 AAYAYGKNLGLAFQLVDDMLDYTRSEKDLGKPAGADLELGLATAPLLYAWKANPELGA-- 384
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ ++ +A ++ ++ + T A Y +KA +++ PDS K L+E
Sbjct: 385 ---LVGRKFEGEGDVARARELVLQSNGIEQTRALAQEYSEKAIEAISGFPDSEAKDGLIE 441
Query: 313 VVDFCLQRL 321
+ LQR
Sbjct: 442 MAMKALQRQ 450
>gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
subunit 1 [Ciona intestinalis]
Length = 400
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 16/319 (5%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------D 62
DM ++ I K + ++V+ + + Y GK RP + + + G +
Sbjct: 90 DDMSHLHSDIKKILHTNVKPLQTMCSYYFDGNGKHFRPKVVSLVSKLCNEHGGIERKVSE 149
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
N ++ E IH +L+HDDVVD S +RRGK + + G+ +V+VG+++++ A ++
Sbjct: 150 NQRKISLIAEMIHVGSLIHDDVVDFSNVRRGKRSVNALCGDHNAVMVGNYVVANASKLLS 209
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ E +S + + GE Q + YL KTA L + + +
Sbjct: 210 SIGNPEITIIISQIIDDIVRGEFMQQDNK----DQFKHYLKKTYKKTASLIANCCKAVAC 265
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
++ N V +A YG N+G+AFQLVDD+LD+ +GK D + G T PV+ A
Sbjct: 266 LSSNNNEVIEAAYQYGSNIGMAFQLVDDLLDFVASSKTLGKPSVADLKLGLATAPVLFAC 325
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ I +++ A + + AL +T A Y + A+ +L
Sbjct: 326 DKHPDLHS-----LILRRFNETGDVEWALEAVYNSSALEETRLLAEQYCKDARLALSMFH 380
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+S+ K +L+++ D L R
Sbjct: 381 ESTNKTALLQLTDVVLNRS 399
>gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
Length = 324
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ E + ++I + + + Y++ GGKRLRP+L L + + +
Sbjct: 4 ISEYREVFLKYLKEKITIKEPANLYEPMVYILGLGGKRLRPVLVLMATEIFDKDYKKALD 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ AIE H +L+HDD++DD+ LRRGK W T +L GD +L A+ + +
Sbjct: 64 ASLAIEIFHNFSLVHDDIMDDAPLRRGKATVHEKWDVNTGILSGDAMLINAYQLFENYEG 123
Query: 127 QEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + A + EG+ + DV+ +DYL +I+ KTAVL A+L++ +++
Sbjct: 124 DTFKELAQLFTKTAIEVCEGQQYDIDFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAIV 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A V ++A+ +G LGIAFQL DD LD G+ GK +G D K T + + +
Sbjct: 184 AEVDEECKKAIYQFGRLLGIAFQLQDDFLDAFGDPKTFGKQVGGDIIENKKTFLYLKSLE 243
Query: 244 RGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + + + + ++ I +++ A T+ Y A D L +
Sbjct: 244 VSAEDDARQLEYLYSISPEDNSGKIETVKSIFQKSGAAKLTKEEIEKYTIMAFDVLENIS 303
Query: 303 DSSW-KKSLMEVVDFCLQRL 321
+ KK L + + ++R
Sbjct: 304 IAEEKKKPLRDFGNMLMKRT 323
>gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis]
gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis]
Length = 445
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 125 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 184
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 185 SHQLVHKQRQVALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 244
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 245 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 304
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 305 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 364
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 365 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 419
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + RL
Sbjct: 420 LAQELTESPYQKGLQVVADLVINRL 444
>gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba]
gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba]
Length = 470
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ D++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 150 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 209
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 210 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 269
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 270 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 329
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 330 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 389
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 390 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 444
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 445 LAQELTESPYQKGLQVVADLVINRM 469
>gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5]
gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5]
Length = 337
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 16/323 (4%)
Query: 13 EKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V+ ++ K + D V Y + GGKR+RP LT+A+ L + + +N + A A+
Sbjct: 14 ALVDPVMEKYLLRGASPEFQDAVLYQVRMGGKRVRPALTIASTLAVGGKEENALPAAAAV 73
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H +L+ DD++D S LRRGK +G T++L+ + +T
Sbjct: 74 ELAHNYSLILDDIIDHSELRRGKPTVWKKYGISTAILIAVHYRESITEALNDTPEPPVFH 133
Query: 132 ALSLVACTLAEGELRQLS--------------LSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A+ L R + V +DYL +I+ KTA L +
Sbjct: 134 AIMAETIKLLTDGERLDILFEQSGRSDEPYVVEQRYRAVRLDDYLRMIERKTAKLIETSC 193
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+L AG + + +AL+ YG NLG+AFQ+ DD++D GE + GK +G D + K
Sbjct: 194 VFGALSAGQRGEILEALREYGYNLGMAFQVGDDIIDIFGEEEKTGKRVGGDIKEHKLGNV 253
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+L R+K + + +S E +K+A I+ E A E Y +A +
Sbjct: 254 VVLLALE-ETRDKERLLAILRKEDVSWEEVKEAISIISETNAREKAEVLRRDYVSRALKA 312
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L LP S ++ L E+ F +R
Sbjct: 313 LEKLPRSEYRDMLEELAVFIEKR 335
>gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
Arkansas]
gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
Arkansas]
Length = 325
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 122/318 (38%), Positives = 197/318 (61%), Gaps = 5/318 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ L +D++ + LIL + + +I ++V++LI SGGKR+RP++ ML +
Sbjct: 11 QLKSLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFFIICKMLNCNNE 70
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
N V +A AIE IH ATLLHDDV+D+S LRRG+ + ++WGN+ S+LVGDFLL+ +F +I
Sbjct: 71 NKVPIAAAIELIHNATLLHDDVIDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLI 130
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ K+ L LS + + GE++Q+ S N+++++E Y+ +I +KTA LFSA E ++
Sbjct: 131 KCKNLNILSILSQASKDVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAAN 190
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+A N ++ALK++G N GI+FQ++DD+LDY + GK +G D GK TLPVI+A+
Sbjct: 191 LAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAY 250
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q T +EK FW + L++A ++ + A+ + A +Y +AK L
Sbjct: 251 QNATSKEKKFWDQISVNPN-----LEQAISYIKVHNAIEKSISIATTYINQAKSCLNIFA 305
Query: 303 DSSWKKSLMEVVDFCLQR 320
+S++K L +++D L R
Sbjct: 306 ESNYKTHLNKLLDCILYR 323
>gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
Length = 326
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 7/311 (2%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAI 71
V LI KR+ + I + + L +GGK LRP + + +A ++
Sbjct: 18 VCQLIEKRVQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSFGQREKQNSEQLTKIAASL 77
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEAL 130
E +H ATL+HDDV+DDS LRRG+V + +G +V GDFL + F ++ + +
Sbjct: 78 EILHMATLIHDDVIDDSPLRRGQVTIQTQFGKDIAVYTGDFLFTIFFELILETMQDSPYM 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GEL Q+ L N + DYL I KTA LF A + G V
Sbjct: 138 KVNAKAMKKILVGELDQMHLYFNQKQSIRDYLRSISGKTAELFRLASSEGAYFGGASPEV 197
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
G ++G+ FQ++DD+LDY + + K I ED NG +LP++ A + K
Sbjct: 198 VSKAGRIGYHIGMTFQILDDILDYTAKEKDFNKPILEDITNGVYSLPLLFAIKHNPDAFK 257
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+++ L+K ++ EN + + A Y QKA D + LP +K L
Sbjct: 258 EL---LDKKDQLTAAELRKIAELVLENGGVEKAQKLARQYTQKAIDDINELPKIKAQKQL 314
Query: 311 MEVVDFCLQRL 321
+++ + L+R
Sbjct: 315 LQLTNHLLKRK 325
>gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster]
gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster]
gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster]
Length = 436
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ D++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 175
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 176 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 235
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 236 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 295
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 296 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 355
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 356 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 410
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 411 LAQELTESPYQKGLQVVADLVINRM 435
>gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712]
gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712]
gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
Length = 328
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
K++ L+ + + D + I V +I SGGK LRP L + E
Sbjct: 13 LSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTATL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S
Sbjct: 73 LAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS 132
Query: 127 QEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + GEL Q+ N +VT + YL I KTA LF+ + V + +G
Sbjct: 133 SLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G N+G+AFQ++DD+LDY + +GK + ED R G +LP
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYAL 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++ E ++ + ++ E + + A Y +KA + LP++
Sbjct: 250 EANREVLLPLLMKKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETK 309
Query: 306 --WKKSLMEVVDFCLQRLN 322
K+ L E+ L R N
Sbjct: 310 AQAKEQLYEITQTILTREN 328
>gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
Length = 323
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSVER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIRIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHMHKGNKVAILSGDYLFAKAFQIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D + Y+ + KTA +E+ L
Sbjct: 128 EMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGGWSESEIVELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K + +++G + + + + +T A Y + A +L +
Sbjct: 248 NDDNKDKLLADIKALHNG----GDEQTIIDYVISQGGIDNTLAVADQYCKDALAALDAVR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V+ R
Sbjct: 304 DFPGKEFLVMAVENLADRK 322
>gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase,
mitochondrial; Short=HPS; Flags: Precursor
gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
Length = 449
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 96/373 (25%), Positives = 147/373 (39%), Gaps = 59/373 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L L +M+ + I K + S + KY + GK +RP++ L +
Sbjct: 81 IDPLR-LVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALC 139
Query: 57 -----------------------------LEYRG-------------DNHVLLACAIEFI 74
+ LA E I
Sbjct: 140 PKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELI 199
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------- 127
HTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + +
Sbjct: 200 HTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLA 259
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L + R K + T YL KTA L S + S+L+ G
Sbjct: 260 TVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGAD 319
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++ +
Sbjct: 320 AATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPE 379
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + +A ++ ++ + T A Y +KA +++ PDS K
Sbjct: 380 LGP-----LVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAK 434
Query: 308 KSLMEVVDFCLQR 320
L+E+ L+R
Sbjct: 435 DGLIEMAVKTLKR 447
>gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302]
gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302]
Length = 323
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ KVN + + D VKY++ GGKR+RP+L L + + + ++ ++ ACA
Sbjct: 7 LVKVNDFLDNLKYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMPACA 66
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ +RRG W T++L GD +L A+ + +
Sbjct: 67 LETYHNYTLLHDDLMDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCNPVYLS 126
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L T + EG+ + DVTE++Y+ +I+ KT+VL + A ++ +++AG
Sbjct: 127 DVLHTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLACAQKIGAILAGAS 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK +G D K T +I A+ R
Sbjct: 187 KQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKVGGDIICNKKTYMLINAYNRADA 246
Query: 248 REKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ + + S E + I + + Y +++K L + S
Sbjct: 247 EQRRELQHWMEAETFNSDEKVAAVTAIYNKVGVDKLAIEKIAYYFEESKKYLDAVQVSDE 306
Query: 307 KKS-LMEVVDFCLQRLN 322
+K+ L + R N
Sbjct: 307 RKAELRLYAQKMMHRKN 323
>gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria
KACC 11862]
Length = 329
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 75/314 (23%), Positives = 133/314 (42%), Gaps = 5/314 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K+++ V I + ++ + + + GGK LRP T+ + + L
Sbjct: 18 IRKELQGVLDRIEANLDANDADVEAALIDMFSHGGKLLRPAFTILIGRFFPAEREPLLNL 77
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E +HTA+L+HDD++DDS RR + + +G + GD+L + F + + +
Sbjct: 78 AATVEMLHTASLVHDDIIDDSPKRRHAESVQSRFGKDVAAYTGDYLFAVTFRTLADNTND 137
Query: 128 EALEALSLVA-CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ ++ + GEL Q + D+T +Y I KTA LF A + +
Sbjct: 138 INVVRMATRYLERILSGELTQRTNHYKRDMTIANYEDQIAGKTAALFVLAANLGIAASHA 197
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ N+G+AFQ++DD+LDY + +GK D R G + P
Sbjct: 198 PKDFADLATDFAYNVGMAFQILDDLLDYSADSTTLGKPTLNDVREGVYSAP----LIIAM 253
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + IS + ++R + AL E A +Y A + L +P+
Sbjct: 254 QDNEEIQALLAKGATISDDEAVHLGELVRASGALAIAEDMAVAYTNTALERLSDMPEHES 313
Query: 307 KKSLMEVVDFCLQR 320
K+ L+ + L R
Sbjct: 314 KRILLSISQTLLTR 327
>gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
17-4]
gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
17-4]
Length = 326
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 5/316 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
++ + LI RI + I + ++ +GGK +RP TL + + +
Sbjct: 13 LQSELIQTIELIDSRIHLRNKSIEHALVDMMNTGGKLVRPAYTLLFSTFGEDQDPNRARA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETK 125
A AIE +H ATL+HDDV+DDS RRG+ + +G +V GD+L + +F + +
Sbjct: 73 FAAAIEVLHMATLIHDDVIDDSPKRRGQQTIQSKYGKDIAVYAGDYLFTVSFKLITDYSN 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + ++ + + GE+ Q+ L N +T +YL I KTA LF+ + +L +G
Sbjct: 133 SMKQMQINTKGMEKILMGEIDQMHLRYNQKITIRNYLTQISGKTAQLFALSCYSGALESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G ++G+AFQ+ DD+LDY + GK + ED + G + P+I A +
Sbjct: 193 QTERFARNCYYIGSHIGMAFQIKDDILDYTQTTDVFGKPVLEDVKQGIYSAPLIYAMR-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K+ F + +++ E +K ++ L + + A Y KA + LPDSS
Sbjct: 251 -KQNATFKELLEKKEQLTNEETQKIQQLVINTGGLDEAKRLAGKYTDKALKLIGQLPDSS 309
Query: 306 WKKSLMEVVDFCLQRL 321
K+ + + L+R
Sbjct: 310 EKEIIRNLTLSLLERT 325
>gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
Length = 315
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 6/308 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + + S+V + + + L+ +GGKR+RP L + + +
Sbjct: 6 PLEAKLAAFEEALSELVRSEVLFVRLIHQDLVTAGGKRIRPRLVFLASGAVGG-APFELE 64
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA A+E +H+ATLLHDD++D++ LRRGK AA +GN SVL GDFLLS+ +V +T S
Sbjct: 65 LALAVELLHSATLLHDDLIDEAELRRGKEAAYRRYGNAVSVLSGDFLLSRLLHVVAKTGS 124
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E +EA + A LAEGE+ Q ++ D + E+Y +I +KTA L + A E +L+ G+
Sbjct: 125 LELVEAFAETARVLAEGEVLQFQVAALEDYSLENYERIITAKTAALMALATEGPALLKGL 184
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + R+AL+ +G+ G AFQ+ DD LD G +GK +G D R GK TL +L +R
Sbjct: 185 KGAWREALRRFGLLYGQAFQMRDDYLDLMGSPEALGKPVGGDVREGKATLLTLLLMERFP 244
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++ + +L++ + RE+ + E R A ++L LPDS +
Sbjct: 245 EV-----RAILKRRGGEAGDLERLRALARESGVAEEVEARIRERALLAAEALDPLPDSPY 299
Query: 307 KKSLMEVV 314
K++L ++
Sbjct: 300 KEALKDLA 307
>gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus]
Length = 407
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D++ + I K + + D+ +Y GK RP++ + A +N +
Sbjct: 93 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQA 152
Query: 70 -------AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A +
Sbjct: 153 RQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALA 212
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 213 RIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 272
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 273 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 332
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 333 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 387
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 388 PSTERDALIQLSESVLTR 405
>gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
S4-120]
gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
S4-120]
Length = 324
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATAL-MLE 58
+ L KD++ V + K + +L+ +GGKR+RPM +A E
Sbjct: 6 LNFLYANMQKDIDSVEKELKKALSGAAADTTSDAALHLLEAGGKRIRPMFVCLSARLAAE 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 186 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 244
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA L
Sbjct: 245 ---VFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKAGA-QKAEDIATAYLKKAVAIL 300
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 301 DSLPQVPELKPLKQIVRVLDKR 322
>gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
Length = 339
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 12/333 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
+ LE+ + +E+V +++ + E ++V +L +GGKR+RP+L L + +
Sbjct: 8 VDALEEKLTEALERVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGKAG 67
Query: 59 YR---GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + +
Sbjct: 68 GDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A +V + + L G++ + D + YLHV++ KT L
Sbjct: 128 RASLIVSDFGRKLMKHHARTFQR-LCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGT 186
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G T
Sbjct: 187 AALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKT 246
Query: 236 LPVILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
LPV+L + ++ + L + + E+R +T A +
Sbjct: 247 LPVLLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAET 306
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A L LP+ + K +L E + RL+
Sbjct: 307 WVERALGHLAVLPEGAVKSALTEFSRQQINRLH 339
>gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus]
Length = 288
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + D+ + + + + +++ + +L+ +GGKR+RP+ L A Y
Sbjct: 10 LADIYMQFQSDITIIEQELEASVQARHDVLKNASTHLLKAGGKRIRPVFVLLAAKFGTYD 69
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+A +E +H A+L+HDDV+DD+ LRRGK + W N+ ++ G+++ ++A
Sbjct: 70 IHVLKNIAVPLELVHMASLVHDDVIDDAELRRGKRTVKSQWDNKVAMYTGNYIFAKAVEA 129
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ LS + GE+ Q+ N YL IK KTA+L + + E+
Sbjct: 130 SAYFDHPRVHQVLSNTLVEMCIGEVEQIRDQYNWGQNLRVYLRRIKRKTALLIAVSCELG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L A +++ L ++G N+G++FQ+ DD+LD+ G ++GK G D R G TLP +
Sbjct: 190 ALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVGTEKQLGKPAGGDLRQGNVTLPALY 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
A + N+ ++ +++ ++E+ +
Sbjct: 250 AMHHDEEISHLIKNMLKNEFPENI-DMQPILKAVKESGGI 288
>gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator]
Length = 337
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 13/323 (4%)
Query: 7 LTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---- 60
L D++ + I + + + + + + Y + GK LRPML++ A ++ Y
Sbjct: 19 LVEDDLKYLFENIQEELINATTQKELQPIATYYMDGQGKALRPMLSILMARVINYHKGSD 78
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A E IH A+LLHDDV+D S RRGK + ++W + + GD++L+ A
Sbjct: 79 VLSYSQRRIAMISEMIHVASLLHDDVIDQSDSRRGKPSVNIIWSQKKVAMAGDYILAVAG 138
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M+ ++ + ++ + L +GE QL + + Y KTA L + +
Sbjct: 139 TMLARIQNDDVTIVINQIITDLVQGEFMQLGSKETENERFAHYFTKTYLKTASLMANCSK 198
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +A V + + + YG N+G+AFQLVDD LD+ +GK G D + G T PV
Sbjct: 199 AVATLAEVDDRMVEMAYQYGRNVGLAFQLVDDFLDFVASSEAIGKPAGADLKLGLATAPV 258
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + +++KAF ++ ++ L T++ A + +A
Sbjct: 259 LFACEQYPELNAMIM-----RRFQEPGDVEKAFDLVHKSNGLQQTKFMAKKHCVEAIRIA 313
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ S ++K+L + D L R+
Sbjct: 314 QSFAKSPYQKALTVLADLVLNRM 336
>gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
Length = 322
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 173/320 (54%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + D+ +++ +N + + M+ VV++++ +GGKRLRP+LT+ TA + YR
Sbjct: 1 MSDIADIVSREVPAINRYLESATETLNPMVQPVVRHVLLAGGKRLRPLLTILTARAMGYR 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ LAC++EF+H+ATLLHDD++D + LRRG+ +A + +G+ ++L GD LL+ A +
Sbjct: 61 ADDVYPLACSLEFLHSATLLHDDILDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRL 120
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E + E + LS A GE+ +++ +++D+ + Y +I KTA L A+ +
Sbjct: 121 VAEYDNPELTKLLSEALLQTATGEILEIAHLRDVDLPLDTYFSIITGKTAYLIQASCQCG 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + QA G ++G+AFQLVDD LDY GK G D + GK TLP++L
Sbjct: 181 AVLAGASPRLIQAAADLGHHIGVAFQLVDDALDYTSPATVSGKPTGGDLKEGKVTLPLLL 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q E+ ++S E+++ + T A KA+ +L
Sbjct: 241 YLQGLPFEERRRLAEDFRQDQLSAEDIEYLRGNVVAGGHAEKTREMAGESLAKAQAALAK 300
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P S + + +V+ L R
Sbjct: 301 FPPSPEAELIGDVLAPMLAR 320
>gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533]
gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533]
Length = 350
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 85/319 (26%), Positives = 157/319 (49%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH 64
T KDM +N +ILK + + ++ D +K S GK LRP + +
Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNGHEKRKEL 92
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIE 123
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSEN 152
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+S ++ A + GE Q + + ++++E++YL IK KT VLF A + +
Sbjct: 153 AQSLHSVIADGKTMQNILVGETEQYNNAYKINISEKEYLDQIKGKTGVLFGLACFIGAYE 212
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q
Sbjct: 213 SGLKVTKALKAKKFGDYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 272
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LP 302
+ D ++ E L++ ++ + + + A + KA +L+ P
Sbjct: 273 NDHTGRLHKLVKLGQD--LTKEQLQEIEKMVNDLDGVKRAQKLADKFTDKALHNLQKHWP 330
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D+ ++ L ++ D L+R
Sbjct: 331 DNKTRQQLEKLTDILLKRS 349
>gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 334
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 18/335 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++ L K +V +++ + E + V Y + +GGKRLRP+LTLA A +
Sbjct: 1 MDVVSRLHQKYGAEVEKALVRYLSIGLAEDFREAVLYQVKTGGKRLRPLLTLAAAEAVSG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A +E IH +L++DD++D +RRG R +G+ ++LVG +
Sbjct: 61 QWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEE 120
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQ-------------LSLSKNLDVTEEDYLHVIK 166
V++T + R ++ +VT +DY+ ++
Sbjct: 121 AVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVS 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L +AA + L + +A ++GM G+AFQ++DDVLD G+ + GK IG
Sbjct: 181 LKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKKFGKEIG 240
Query: 227 EDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+D + K V +A + E+ + + ++++A ++ A +
Sbjct: 241 KDIKEHKRGNAVVAVALSHLGEGERRRLLEILAREVVEEADVREAVALLDSVGAREEALR 300
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A Y ++A+ L +P++ +L E++DF + R
Sbjct: 301 LAARYREEAERHLAKIPNN---GTLKELLDFIVAR 332
>gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative /
dimethylallyltransferase, putative / prenyl transferase,
putative [Arabidopsis thaliana]
gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana]
gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 422
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L R
Sbjct: 86 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPE 145
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 146 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 205
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 206 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTY 265
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 266 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 325
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ + N+ A + +++ +
Sbjct: 326 SDIRHGVITAPILFAM-----EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRAREL 380
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 381 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 420
>gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana]
Length = 423
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L R
Sbjct: 87 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPE 146
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 147 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 206
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 207 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTY 266
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 267 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 326
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ + N+ A + +++ +
Sbjct: 327 SDIRHGVITAPILFAM-----EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRAREL 381
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 382 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 421
>gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
Length = 309
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 2/295 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ +I +R+ S V ++ + +Y+I +GGKRLRP L L L YRG++ LA +
Sbjct: 1 MGEVDHVIAQRLTSSVPLVAQISQYIIAAGGKRLRPALLLLICGALGYRGNHRFSLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL +++F M++E + +E
Sbjct: 61 ELIHTATLLHDDVVDASTLRRGRATANQTFGNPASVLVGDFLHTRSFQMMVEAGNMRIME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE+ QL + + E YL VI+SKTA LF A+ + +++A +
Sbjct: 121 VLSEATNVIAEGEVLQLMNMHDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+A +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A QRG +
Sbjct: 181 EACATYGQALGTAFQIIDDVLDYDGNTAEMGKNLGDDLREGKSTLPLIVAMQRGNAEQAA 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ I +G S + L I+R AL A++ ++A + LP S++
Sbjct: 241 IVRHAIEEG--STDRLDDVVAIVRNTGALEAARMAAFAEARRAMTAAEQLPASNY 293
>gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri
FSL N1-067]
Length = 291
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 5/289 (1%)
Query: 34 VKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
VK LI +GGK LRP L +A ++ D V +A A+E +H ATL+HDDVVDDS LRR
Sbjct: 4 VKDLIHAGGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRR 63
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVACTLAEGELRQLSLS 151
G +G +V GD+L F + S E +E S + GEL Q+ S
Sbjct: 64 GIPTIHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMRTS 123
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+DVT +YL I KTA LF+ + + + + G LG+AFQ++DDV
Sbjct: 124 YKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDV 183
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
LDY +GK + D + G +LP+I A + F +S ++
Sbjct: 184 LDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK---GHLAEFEPLLSQKLAMSDAASEQVL 240
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ + + A Y KA ++ LP S++ + + L R
Sbjct: 241 ALISKYNGVEQAFKLANKYTNKALREIKKLPAGSYRDDMYRLTKSILDR 289
>gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
Length = 325
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 134/314 (42%), Positives = 179/314 (57%), Gaps = 1/314 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L DM+ V+ I + + SD+ MIP + Y++ SGGKRLRP+LTL TA + Y+G HV
Sbjct: 11 LCKADMQLVDTCIHENLQSDIMMIPAIGHYIVNSGGKRLRPLLTLLTARLFGYQGKRHVP 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L+ +EFIHTA+LLHDDVVD S RRG +A VWGNQ SVLVGD+L S+AF M++
Sbjct: 71 LSVVVEFIHTASLLHDDVVDSSDQRRGAPSANGVWGNQASVLVGDYLFSRAFQMMVSDGD 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L+ +S V LAEGE+ QLS + +L++TE + L VI+ KTAVLF AA EV + +AG
Sbjct: 131 MVMLKLMSDVTNALAEGEVLQLSRTFHLEMTEAECLEVIERKTAVLFKAATEVGAHVAGQ 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
A+ YGM LG+AFQL+DD LDY E + GK +G D GK TLP+I A QR
Sbjct: 191 SAQTIAAMAEYGMCLGVAFQLMDDALDYLAEAEDAGKPVGHDLEEGKITLPLIHAMQR-D 249
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++ G + + + A Y +AK L D
Sbjct: 250 EALAERVEAVSERGGYEPGDREWVRERVAAQGGAEYAMQCAREYAGRAKKLLPEHADPEM 309
Query: 307 KKSLMEVVDFCLQR 320
K L ++ DF R
Sbjct: 310 KGLLADLADFSAHR 323
>gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 364
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 12/303 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + YL+ GGKR+RP++TL L +++ + E +HTATL+HDD+ D S
Sbjct: 60 IIEPSWYLVEKGGKRIRPIITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIEDGSE 119
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLVACT 139
RRG + +G ++ +GDFL + V + + + +
Sbjct: 120 TRRGAQSVYKKYGMDIALNLGDFLFFFPIKVLLDSKKLDDAVKYRILKAHEKHMIRIGLG 179
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
A +L+ +TEE+Y+ V KT VL A E+ ++I G +++ + L +
Sbjct: 180 QATDIAWHRALTDIGKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFAS 239
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+L+ K IG+D + GK TL V+ A K++++ +
Sbjct: 240 MIGVAFQIEDDILNITKSELSDNKGGIGDDIQEGKVTLIVVHALNHAGKKDRDRLIEILK 299
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFC 317
S +K+A IM ++ ++ + S +A L LPDS K + +
Sbjct: 300 SHTKSKIEIKEAISIMEKSGSIEYARSVSKSIVDEALRLLDKSLPDSKGKNMMRMLASTL 359
Query: 318 LQR 320
+ R
Sbjct: 360 INR 362
>gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus]
gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus]
Length = 409
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D++ + I K + + D+ +Y GK RP++ + A +N +
Sbjct: 95 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQA 154
Query: 70 -------AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A +
Sbjct: 155 RQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALA 214
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 215 RIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 274
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 275 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 334
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 335 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 389
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 390 PSTERDALIQLSESVLTR 407
>gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 330
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 154/316 (48%), Gaps = 3/316 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++++V L+ I I D + +I GGK LRP L + V L
Sbjct: 17 LQPELQQVMQLMTANINIQDADINDAILEMIHGGGKLLRPAYCLLFSQFTTTDRQRMVAL 76
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KS 126
A ++E +HTATL+HDD+VDD+ALRR V + +G T+V GD+L F ++ S
Sbjct: 77 AASLETLHTATLIHDDIVDDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSS 136
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
++++ S + GE++Q +LD+T +YL I+ KTA LF+ + + + +G
Sbjct: 137 FKSIQMNSENMEKILVGEVQQKDRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQ 196
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ Q + G+ +G+AFQ++DD+LDY+ E GK I ED G T P+I A Q
Sbjct: 197 SSHFAQRARKAGLAIGMAFQILDDILDYQEVSQETGKPILEDVAEGVYTSPLIFALQTEA 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K + G IS ++ ++ +V + A Y Q A +R LPD
Sbjct: 257 KHDLLPLMRL--QGAISDTQRQEVQRLVINAGGVVQAQELATKYTQDALAIMRKLPDQPA 314
Query: 307 KKSLMEVVDFCLQRLN 322
K L+ + L R N
Sbjct: 315 KTDLISLTKRLLDRHN 330
>gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40]
gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
flavus NRRL3357]
gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae]
gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
flavus NRRL3357]
Length = 451
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 92/372 (24%), Positives = 148/372 (39%), Gaps = 63/372 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 83 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTKSEGKHMRPLLVLLMSQATALTPRHGRW 142
Query: 57 --------------------------------------LEYRG---DNHVLLACAIEFIH 75
LA E IH
Sbjct: 143 SSSPSYTVNDPISSPSVLADTNPDLNPLVSSSAEAKYDFAGDENILPTQRRLAEITELIH 202
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E L+
Sbjct: 203 TASLLHDDVIDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLAT 262
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-------QN 188
V L EGE QL + + + I + + S
Sbjct: 263 VIANLVEGEFMQLKNTASDEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGDSTP 322
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V +A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A+++ +
Sbjct: 323 QVVEAAYAYGRNLGLAFQLVDDMLDYTVSDAELGKPSGADLELGLATAPLLFAWKQNPEL 382
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ ++++A ++ ++ + T A Y KAK ++ PDS K
Sbjct: 383 GP-----LVGRKFSREGDVQRARELVYQSNGVEKTRVLAQEYADKAKAAISSFPDSEAKD 437
Query: 309 SLMEVVDFCLQR 320
L+++ + + R
Sbjct: 438 GLLQMCEKTMNR 449
>gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
Length = 344
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 7/325 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + ++ V + + + + ++L+ +GGKR+RPMLTL A + +
Sbjct: 20 ALETALREALDVVEARLRLAVGNADPIADAASRHLVEAGGKRVRPMLTLLGAHLAGSAPE 79
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +E H A+L HDDV+D + RRG AA+LV+GN ++L GD L ++A
Sbjct: 80 VPSAVLDAAVVVELTHLASLYHDDVMDSAPTRRGAAAAQLVYGNNVAILTGDLLFARA-S 138
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V+ EA+ + L G+L + K + E YL V+ KTA L + A
Sbjct: 139 NVVAGLGPEAVRLQAETFERLCLGQLHETVGPKPGEDPVEHYLDVLSDKTASLIATAGRF 198
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ AG A+ YG ++G+AFQL DDVLD +V++ GK G D R G PTLPV+
Sbjct: 199 GAMFAGGSGETVTAMVRYGEDVGVAFQLADDVLDLTSDVDDSGKRPGTDLREGVPTLPVL 258
Query: 240 LAFQRGTKREKNFWKS---TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
LA + + + + + L +A +R++ A + +A
Sbjct: 259 LARRAAAAGDVAARRVVALLDSGRLADDDVLAEAVSALRDHPVTEAARASAREWAHRAAT 318
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L LPD+ +++L R+
Sbjct: 319 HLLALPDTPARRALEIYAATVADRV 343
>gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
Pyrophosphate Synthase
gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
Pyrophosphate Synthase
Length = 348
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L+ R
Sbjct: 12 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPE 71
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 72 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 131
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 132 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTY 191
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 192 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 251
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ + N+ A + +++ +
Sbjct: 252 SDIRHGVITAPILFAM-----EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRAREL 306
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 307 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 346
>gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 146/322 (45%), Gaps = 12/322 (3%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALM---LEYRGD 62
+ K+++ I + + +D ++ K+ GKR RP + A
Sbjct: 1 MVEKELQPFADSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKANHQGSEVWR 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
L +E IH A+L+HDDV+D++ RRG A ++ N+ +VL GD+LL++A ++
Sbjct: 61 KQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLA 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS- 181
++ ++ ++ +L GE+ QL S + + YL KTA L A ++
Sbjct: 121 RLENTAVVQIMATALESLVAGEIMQLKASPEELLQMQSYLKKSYYKTASLICYACRSTAL 180
Query: 182 -LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++V A + +G ++G+AFQ+ DD+LD+ + +GK D G T P++
Sbjct: 181 LGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTAAADILGKPALADMSLGLSTAPILY 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDSLR 299
A E + + + + A + ++ A+ + A + Q+A D+L
Sbjct: 241 A-----AEEYPHLRPLVKRRFKEKGDKQTALEALYKSEVAMDKAKRLAEFHAQRAVDALL 295
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP S + +L+ + + R
Sbjct: 296 RLPQSEARDALLRLTYVVITRK 317
>gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana]
Length = 422
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L+ R
Sbjct: 86 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPE 145
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 146 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 205
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 206 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTY 265
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 266 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 325
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ + N+ A + +++ +
Sbjct: 326 SDIRHGVITAPILFAM-----EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRAREL 380
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 381 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 420
>gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni]
gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni]
Length = 449
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 129 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 188
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 189 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 248
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 249 ASIMIARLRSDDVTIVLSKILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 308
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 309 LKATAVIAQADDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 368
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 369 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 423
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 424 LAQELTESPYQKGLQVVADLVINRM 448
>gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group]
gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group]
Length = 399
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 26/337 (7%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------ 57
L ++ +++ + + ++V + Y +G GKR P + L A +
Sbjct: 67 ALIKDEVSEISNRLRSMVVAEVPELTLAAGYFFRAGAEGKRTCPTVLLLMASSISMDMAD 126
Query: 58 ------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ ++ LA E IH +L+HDDV+DD+ RRG + V G + +VL GD
Sbjct: 127 PIVGSKNEIRERYMRLAEITELIHVTSLIHDDVLDDANTRRGMDSLNCVMGKKLAVLAGD 186
Query: 112 FLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
FLLS+AF + + E + L+ L GE Q+ ++ + + YL KTA
Sbjct: 187 FLLSKAFSTAAVSLDNAEVILLLATAVNNLVTGEFMQMRITPIQRCSMDYYLQKSYYKTA 246
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L S + + +++AG V YG +LGIA+QL+DD+LD+ G +GK D
Sbjct: 247 ALISNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDILDFTGTSASLGKGSLSDIH 306
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G T P++ A E + + G N+ A + ++ + T A +
Sbjct: 307 QGIVTAPILFAM-----EEYPQLRVIVEQGFDDPSNVDAALAYLARSKGIERTRLLAAEH 361
Query: 291 GQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
+ A D++ LP+S +++L ++ + ++R
Sbjct: 362 AKLAADAIDALPESKDGSVLISRQALKDLTEKLIKRT 398
>gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
Length = 330
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 3/316 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++++V L+ I I D + +I GGK LRP L + V L
Sbjct: 17 LQPELQQVMQLMTANINIQDADINDAILEMIHGGGKLLRPAYCLLFSQFTTTDRQRMVAL 76
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KS 126
A ++E +HTATL+HDD+VDD+ALRR V + +G T+V GD+L F ++ S
Sbjct: 77 AASLETLHTATLIHDDIVDDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSS 136
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
++++ S + GE++Q + +LD+T +YL I+ KTA LF+ + + + +G
Sbjct: 137 FKSIQMNSENMEKILVGEVQQKNRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQ 196
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ Q + G+ +G+AFQ++DD+LDY+ E GK I ED G T P+I A Q
Sbjct: 197 SSHFAQRARKAGLAIGMAFQILDDILDYQEVSQETGKPILEDVAEGVYTSPLIFALQTEA 256
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K + G IS ++ ++ +V + A Y Q A +R LPD
Sbjct: 257 KHDLLPLMRL--QGAISDTQRQEVQRLVINAGGVVQAQELATKYTQDALAIMRKLPDQPA 314
Query: 307 KKSLMEVVDFCLQRLN 322
K L+ + L R N
Sbjct: 315 KTDLISLTKRLLDRHN 330
>gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus]
Length = 422
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 12/318 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D++ + I K + + D+ +Y GK RP++ + A +N +
Sbjct: 108 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQA 167
Query: 70 -------AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A +
Sbjct: 168 RQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALA 227
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + S+
Sbjct: 228 RIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 287
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 288 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFAC 347
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y KA +R L
Sbjct: 348 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLR 402
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + +L+++ + L R
Sbjct: 403 PSTERDALIQLSESVLTR 420
>gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex]
Length = 393
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 13/324 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE------- 58
L D+E + I + + + + +Y GK +RP++T+ A +
Sbjct: 74 SLVRLDLEGLYEDIREGLSETQPELKLIAQYYFNGEGKAIRPVITMCMARAINFHLDQNT 133
Query: 59 -YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
Y +A E IHTA+L+HDDV+D + RR + + +VWG + S++ GDF+L+ A
Sbjct: 134 PYVLQKQKKIAQIAEMIHTASLVHDDVIDVADSRRSRPSVNIVWGQRKSIIAGDFILAMA 193
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
M+ ++++ + LS V L +GE QL +N D Y KTA L + +
Sbjct: 194 SKMLARLQNKQVIILLSQVLADLVQGEFMQLGARENKDERFAHYSEKTFKKTASLIAYSC 253
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ S+++G ++++ YG +G+AFQLVDD+LD+ ++GK + D R G T P
Sbjct: 254 QAVSVLSGADSTLQAVAFQYGRQIGMAFQLVDDLLDFIATSAQLGKPVAADLRLGLATAP 313
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A Q+ ++ I + + AF ++ + L T+ A+ Y A
Sbjct: 314 VLFAAQKFSELNP-----LILRRFQEPGDAETAFRLVLRSDGLQRTKDLAHQYCNDAVTQ 368
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
+ L S ++++L+ + L R+
Sbjct: 369 IAQLTPSPYQQALVTLAHQLLHRM 392
>gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
BL23]
gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
BL23]
gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W]
gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II]
Length = 325
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ +I K+I ++ + + +I GGK LRP L + + + + L
Sbjct: 13 LAPELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIAL 72
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A AIE +HTATL+HDD++D S RR +V + +G T+V GD+L F ++ S
Sbjct: 73 AAAIETLHTATLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASS 132
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ S + +GEL Q++ +T +DYL + KT LF+ + + + +G
Sbjct: 133 LRSIQQDSGSMEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGS 192
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + + GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR
Sbjct: 193 SPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQR-- 250
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F +I+ + ++ ++ +V A ++A L+ LP +
Sbjct: 251 -NRQAFLPLLAKKDQITDAEMDDLRKLVIHHQGVVQAYAMAQKRTEQAIAGLQKLPAGAA 309
Query: 307 KKSLMEVVDFCLQRL 321
+ L+ + L R
Sbjct: 310 QDDLIRLTQSLLNRK 324
>gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus
fer1]
Length = 352
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 30/352 (8%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---------DVEMIPDVV---KYLIFSGGKRLRPM 48
M +ED K ++ + I ++ + D I D++ + +GGKRLRP+
Sbjct: 1 MSNIEDNYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPI 60
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG------ 102
L + M + + + + +IE + L+HDD++D S +RRGK +
Sbjct: 61 LMIMGYNMFSGQDERIIKASISIELAQSFLLIHDDIMDQSDMRRGKPSFHKAVEGSLDGN 120
Query: 103 -----------NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
+ ++ + +A S + +G++ + S
Sbjct: 121 DATRIAENLAISAGDLIDTFSHEALLRSGFELENLLDADFEFSRIIEDTGKGQILDIYSS 180
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+EE + KTA + Q +K +G GIAFQL DD+
Sbjct: 181 IENLYSEERLTKLHFLKTARYTVQGPLLMGAYLSGNKKYIQEIKDFGKYAGIAFQLYDDM 240
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
L G + GK + D GK TL +I A++ K ++ F +S + G +S + +
Sbjct: 241 LGIFGVEEKTGKPVKGDVNEGKKTLLIIKAYENSGKEDREFIESCLKCGDVSDSDFNRLR 300
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
+++ + T+ + Y A+ +L + D K L ++++ ++R N
Sbjct: 301 ELIKSTGSYDYTKQKIDEYNNIARSALEKIDGDKEVIKMLDFLLEYLIKREN 352
>gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 455
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 95/369 (25%), Positives = 149/369 (40%), Gaps = 60/369 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL------------ 55
K+M+ + I K + S + KY + GK +RP++ L A
Sbjct: 91 VAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHMRPLIVLLMARATALCPKGPRLH 150
Query: 56 ----MLEYRG--------------------------------DNHVLLACAIEFIHTATL 79
M + LA E IHTA+L
Sbjct: 151 SAQPMGGVDTAISPPNILVDVNPSSPLTSPAVEPTEVDSDILPSQRRLAEITELIHTASL 210
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------A 132
LHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ E +E
Sbjct: 211 LHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNAEVIELLATVIAN 270
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L + R + YL KTA L S + S+++ G + +
Sbjct: 271 LVEGEFMQLKNTERDERRPVWSEDALAYYLQKTYLKTASLISKSCRASAILGGSDAASVE 330
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++ +
Sbjct: 331 AAYAYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGA-- 388
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ ++ +A ++ ++ + T A Y ++A ++ PDS K L+E
Sbjct: 389 ---LVGRKFEQEGDVARARQLVLQSDGIEQTRALAEDYSERAIAAISGFPDSEAKDGLVE 445
Query: 313 VVDFCLQRL 321
+ L+R
Sbjct: 446 MAVKALKRT 454
>gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
Length = 292
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 149/286 (52%), Gaps = 5/286 (1%)
Query: 38 IFSG--GKRLRPMLT-LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
I +G GK +RP+LT L A+ + A +E IHTATL+HDDV+D ++ RRG
Sbjct: 7 ILNGSTGKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDVIDMASTRRGV 66
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ N+ +VL+GDF+LS A I + +S + L+EGE+RQ + +
Sbjct: 67 PTLNAFFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISRLGRELSEGEIRQFETADKV 126
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ E+ Y+ VI+ KTA+LFSA EV ++ + + +K G LG AFQ+ DD+ DY
Sbjct: 127 IIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDDIFDY 186
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
GK G D R GK TLP++ A + ++ + ++ S E+L+
Sbjct: 187 YRNDV--GKPTGNDIREGKITLPLLFALKNEQSALRDHCLTILDQKAFSEEDLQLLTSFA 244
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
E+ +V E + + KAK L PDS +SL+ + DF +QR
Sbjct: 245 IEHGGIVYAERKMAEFIDKAKAELAVFPDSDALQSLLALADFIVQR 290
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
Length = 309
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + + + I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 18 DLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAGGKRLRPILCLATCELMGGTV 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + +CA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 78 EMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ V LA+ ++ L D+ EE + KT
Sbjct: 138 YAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A + ++AG + Q L Y N+G+AFQ+VDD+LD E+GK G+D +
Sbjct: 198 ALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGKTAGKDIK 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L ++ +A
Sbjct: 258 AQKATYPSLW--------------------------------------GLEASKAKAQEL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK + + L+ + DF + R +
Sbjct: 280 VNEAKAQIESF--GEKAQPLIAIADFIVNRTH 309
>gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
Length = 326
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
+ ++ V +I +R+ + I DV+ +SGGK LRP L A + + R D
Sbjct: 11 IEQRLKTVCSIIEERVTVRNKEIQDVLVDFTYSGGKMLRPALFFLFADLGEPIDERNDQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+A ++E +H ATL+HDD++DDS LRRG++ + +G +V GD L +Q F ++IE+
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRGRITVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 125 KSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + L GEL Q+ N+D + DYL I KTA LF A +
Sbjct: 131 MNGSHFLATNAQAMKRLLLGELDQMHTRYNIDESIADYLQSINGKTAELFWLACIEGAHF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+ ++ G N+GIAFQ+ DD+LDY + + K + ED G TLP++ A +
Sbjct: 191 GGLDLENQERAGEIGRNIGIAFQVFDDILDYTADSGTLKKPVLEDLAQGVYTLPLLFAKE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +++ +++ E + ++R + A SY +KA + LP+
Sbjct: 251 QNPAAFESY---LSKKSELTTEEATEVAELVRRYHGVEKATDFAVSYTEKALADIELLPN 307
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K+ + E+ LQR
Sbjct: 308 TPSKEKIRELTQLLLQR 324
>gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies]
Length = 427
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 96/341 (28%), Positives = 151/341 (44%), Gaps = 30/341 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------ 57
L ++ + + I +++ + +Y G GKR RPM+ L A L
Sbjct: 91 SLVADELSILANRLRSMILTEIPKLGTAAEYFFKLGVEGKRFRPMVLLLMASSLTIGIPE 150
Query: 58 --------EYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+ +A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 151 VAADCLRKGLDEEQRLRQQRIAEITEMIHVASLLHDDVLDDADTRRGVGSLNFVMGNKLA 210
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E +E LS V L GE+ Q++ + + E Y+
Sbjct: 211 VLAGDFLLSRASVALASLKNTEVVELLSKVLEHLVTGEIMQMTNTNEQRCSMEYYMQKTF 270
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L + + + +LIAG V YG NLG+A+QL+DDVLD+ G +GK
Sbjct: 271 YKTASLMANSCKAIALIAGQPAEVCMLAYDYGRNLGLAYQLLDDVLDFTGTTASLGKGSL 330
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R G T P++ A E IN ++ A + ++ + +
Sbjct: 331 SDIRQGIVTAPILFAL-----EEFPQLHDVINRKFKKPGDIDLALEFLGKSDGIRKAKQL 385
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A + A S+ P S +K+L+++ + + R
Sbjct: 386 AAQHAGLAAFSVESFPPSESEYVKLCRKALIDLSEKVITRT 426
>gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
Length = 323
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSVER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIRIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFQIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ L
Sbjct: 128 EMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGGWSESEIVELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K +N+G + + + +T A Y + A +L +
Sbjct: 248 NDDNKDRLLADIKALNNGGNEQD----IIDYVIAQGGIDNTLAVADKYCKDAFAALEAIR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V+ R
Sbjct: 304 DFPGKEFLVMAVENLADRK 322
>gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis]
gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis]
Length = 445
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ +++ + + S + + Y GK LRPM+T+ A L Y +
Sbjct: 125 ILDDELKYFYDDVRDLLQSGTSQSELDTIACYYFDGQGKALRPMVTMLMAKALNYHLNNE 184
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 185 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 244
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 245 ASIMISRLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 304
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 305 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 364
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++AF ++ ++ L T + A + +A
Sbjct: 365 PVLFACEKYPELNPMVM-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIR 419
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L +S ++K L V D + R+
Sbjct: 420 LAQELTESPYQKGLQVVADLVINRM 444
>gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
marneffei ATCC 18224]
gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
marneffei ATCC 18224]
Length = 459
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 99/377 (26%), Positives = 157/377 (41%), Gaps = 68/377 (18%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + I K + S M+ V KY +S GK +RP+L L +
Sbjct: 86 IVGKELKFLTKNIRKLLGSGHPMLDKVAKYYTWSEGKHVRPLLVLLMSQATALAPHNPHT 145
Query: 57 -------------------------------------------LEYRG---DNHVLLACA 70
LA
Sbjct: 146 HSSSISSQQQSYISEPISSPLVLSDANPDTSPLTAPAADLEGIFGEDPNILPAQRRLAEI 205
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IHTA+LLHDDV+D++ RR +A +GN+ +VL GDFLL +A + ++ E +
Sbjct: 206 TELIHTASLLHDDVIDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALARLRNPEVI 265
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLI 183
E L+ V L EGE QL + + + + I KTA L S + ++L+
Sbjct: 266 ELLATVIANLVEGEFMQLKNTASDERSPVFTDDTIAYYLQKTYLKTASLISKSCRATALL 325
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ +A SYG NLG+AFQLVDD+LDY E GK G D G T P++ A++
Sbjct: 326 GNSTPEIVEAAYSYGRNLGLAFQLVDDMLDYTVNSVEFGKPAGADLELGLATAPLLFAWK 385
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + ++++A ++ + + T A Y KA +L LPD
Sbjct: 386 SNPELGA-----LVGRKFEQEGDVERARELVARSDGIEQTRALAQEYADKAAAALDILPD 440
Query: 304 SSWKKSLMEVVDFCLQR 320
S K L+++ + ++R
Sbjct: 441 SDAKNGLLDMCEKTMKR 457
>gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
Length = 323
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 7/322 (2%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
L + + + + + D + Y++ GGKRLRP LT+ +A +
Sbjct: 2 QLITDYQNEFVAFMQEHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A+E H +L+HDD++D + LRRG W T +L GD +L A+ +
Sbjct: 62 LYAALAVEIFHNFSLVHDDIMDAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFEQY 121
Query: 125 KSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + S A + EG+ + + V+ + YL +I KTAVL AAL++ +
Sbjct: 122 EPNIFQELAKIFSKTAIEVCEGQQYDVDFEQQAQVSTDQYLKMIAYKTAVLVGAALQMGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+IA +Q + +G+ LGIA+QL DD LD G+ + GK IG D K TL + A
Sbjct: 182 IIAQTTEENKQKIYDFGLALGIAYQLQDDYLDTFGDAS-FGKKIGGDILQNKKTLLYLKA 240
Query: 242 FQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++GT +K + + S E + + + + + +Y KA L
Sbjct: 241 LEKGTPEQKQELLTLYSTEPKSEEEKITRVTELFIATESHTFLRAQVETYTLKAFAILDT 300
Query: 301 LPDSSWKK-SLMEVVDFCLQRL 321
L KK L E + R
Sbjct: 301 LDIPEEKKNILKEFGGSLMNRT 322
>gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
Length = 324
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EK+ + D + + + + Y++ GGKR RP+LTL A + + D + A A
Sbjct: 8 LEKLQTEFDRHSYGDAPVELYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPAMA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TL+HDD++D + LRRG W T++L GD +L +A+ ++++ ++
Sbjct: 68 VEVFHNFTLMHDDIMDRAPLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPKEQLR 127
Query: 131 E---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ A + EG+ ++ K DVTE +Y+ +I+ KT+VL ALE+ +IAG
Sbjct: 128 SVLARFNRTAAEVCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFALELGGIIAGAD 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT- 246
+ Q L S G N+GI FQL DD+LD G+ + GK +G D K T +I A +
Sbjct: 188 DETVQLLYSAGENMGIGFQLKDDLLDVYGDPAKFGKQVGGDIIANKKTFLLIEALSKANG 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSS 305
+ + D + E + I TE++ Y + SL+ L DS
Sbjct: 248 DLKTELDRWISLDTFDNAEKVAAVTGIYDALGIRAFTEHKINEYFSRGIASLQQLRSDSV 307
Query: 306 WKKSLMEVVDFCLQR 320
K L++ VD + R
Sbjct: 308 QKDVLLQFVDQLVAR 322
>gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
Length = 350
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--- 60
LE ++ + ++++ + E +V +L +GGKR+RP+LTL + +
Sbjct: 24 LETKLRDALDDIEQMLVQETQTQREKTSALVSHLRAAGGKRMRPLLTLLVSQLGAPDQPV 83
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A A+E H A+L HDD++D++ +RRG AA + W N +V+ GD + S+A +
Sbjct: 84 SSQVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLL 143
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + S L +G++R + + D E Y+ V++ KT L A
Sbjct: 144 VS-GLNPTIVAQHSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGCAALYG 202
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--- 237
+ ++G + A+ +G +LG+AFQ+ DDVLD + + GK G D R+G T P
Sbjct: 203 AELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEAQSGKTPGADLRDGTKTFPVLL 262
Query: 238 ---VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ + D L + + + +T+ A + ++A
Sbjct: 263 LEKTVQDGRDTAPDRALLQAIADTDALQDDAVLAQVTAQLAAHPVTEETKRLAGEWVERA 322
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L+ +PDS K++L+E + RL
Sbjct: 323 LAHLQHIPDSEVKRALIEFAHLQINRL 349
>gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
mulieris 28-1]
gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
mulieris 28-1]
Length = 339
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 12/333 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
+ LE + + +V +++ + E ++V +L +GGKR+RP+L L + +
Sbjct: 8 VDALEKKLTEALSRVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAG 67
Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + +
Sbjct: 68 GDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A +V + + L G++ + D + YLHV++ KT L
Sbjct: 128 RASLIVSDFGRELMKYHARTFQR-LCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGT 186
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G T
Sbjct: 187 AALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKT 246
Query: 236 LPVILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
LPV+L + ++ + L + + E+R +T A +
Sbjct: 247 LPVLLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAET 306
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A L LP+ + K +L E + RL+
Sbjct: 307 WVERALGHLAVLPEGAVKTALTEFSRQQINRLH 339
>gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35243]
gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35243]
Length = 339
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
+ LE+ + + +V +++ + E ++V +L +GGKR+RP+L L + +
Sbjct: 8 VDALEEKLTEALSRVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAG 67
Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + +
Sbjct: 68 GDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A +V + + L G++ + D + YLHV++ KT L
Sbjct: 128 RASLIVSDFGRELMKYHARTFQR-LCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGT 186
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G T
Sbjct: 187 AALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKT 246
Query: 236 LPVILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
LPV+L + ++ + L + + E+R +T A +
Sbjct: 247 LPVLLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAET 306
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A L LP+ + K +L E + RL+
Sbjct: 307 WVERALGHLAVLPEGAVKTALTEFSRQQINRLH 339
>gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM
22836]
Length = 325
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +++K+ S + + + + Y++ GGKR+RP L+L + + +
Sbjct: 8 DEILSIVNTEIKKIE------YSSAPKSLFEPISYILSLGGKRVRPALSLMSYNLYKEDV 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + +A IE H TLLHDD++D + +RRG + W + T+VL GD +L +A+ +
Sbjct: 62 ERVIPIALGIEIFHNFTLLHDDLMDRADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEI 121
Query: 122 IETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ SQ S A + G+ + + +DVT +YL +I+ KTAVL + +L+
Sbjct: 122 AKIDSQYLKPVLDLFSTTATEICCGQQYDMEFEQRMDVTIAEYLEMIRLKTAVLLACSLK 181
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++AG + L +YG+++G+ FQL+DD+LD G+ + GK IG D K T
Sbjct: 182 EGAIVAGASAEDAENLYNYGIHVGLGFQLMDDLLDVYGDSSNFGKKIGGDILCNKKTFLF 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I A + + + + + E +K I + +E Y ++A L
Sbjct: 242 INA-LLSEEVKDDLINWVNKENYDASEKIKAVTAIYNKLNLKQKSEDLINDYYKQAVTCL 300
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRLN 322
+ D+S KK L ++ + + R++
Sbjct: 301 DKVSIDASRKKELYKLAESLMTRIS 325
>gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35239]
gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35239]
Length = 339
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
+ LE+ + + +V +++ + E ++V +L +GGKR+RP+L L + +
Sbjct: 8 VDALEEKLTEALSRVEARLVEETRTAQENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAG 67
Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + +
Sbjct: 68 GDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A +V + + L G++ + D + YLHV++ KT L
Sbjct: 128 RASLIVSDFGRELMKYHARTFQR-LCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGT 186
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G T
Sbjct: 187 AALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKT 246
Query: 236 LPVILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
LPV+L + ++ + L + + E+R +T A +
Sbjct: 247 LPVLLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAET 306
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A L LP+ + K +L E + RL+
Sbjct: 307 WVERALGHLAVLPEGAVKTALTEFSRQQINRLH 339
>gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus
siliculosus]
Length = 479
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 18/328 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALM-LEYRGDN 63
L KD+ I + + S+ ++ K+ GKR RP + AL + +
Sbjct: 155 KLASKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKPMEA 214
Query: 64 HV---------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
H L E IH A+L+HDDV+D++ +RRG +A ++ N+ +VL GD+LL
Sbjct: 215 HRESEEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLL 274
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++A ++ + +E ++ +L +GE+ QL + + YL KTA L +
Sbjct: 275 ARASVLLARLGDVQVVEIMATALDSLVQGEIMQLKMDPEKLLDISLYLRKSYYKTASLIT 334
Query: 175 AALEVSSLIAGVQNSVRQAL--KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A + +++ G + A + YG ++G+AFQ+VDD+LD G + +GK D G
Sbjct: 335 NACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLG 394
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
T P++ A + + K + + +KA + + A+ + A + Q
Sbjct: 395 LATAPILYAAENAPE-----IKKIVKRRFKKEGDKEKALKAVLDGDAVARSRELARWHAQ 449
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A D++ LP S + L+ + L R
Sbjct: 450 RAVDAVLRLPPSEARNGLVNICHIVLTR 477
>gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group]
Length = 581
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 17 FLILK--RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLA 68
L+ I ++ ++ + + +GGKRLRP L + L H LA
Sbjct: 273 QLLRALTYIHTENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLA 332
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + ++ E
Sbjct: 333 EIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIE 392
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
++ +S V A GE++Q S + DVT +DYL KTA L +++ +++ +GV
Sbjct: 393 VIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAAIFSGVST 452
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q K
Sbjct: 453 TICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPKL 512
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ I+ ++L A ++ + + + A G A +L+CLP S ++
Sbjct: 513 RE-----IIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKGDLALQNLQCLPKSQFRS 567
Query: 309 SLMEVVDFCLQRL 321
+L VV + LQR+
Sbjct: 568 TLENVVKYNLQRI 580
>gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
Length = 338
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---- 63
KDM +++ +IL + S ++ ++ GK LRP + D
Sbjct: 21 VQKDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFG-AFGPDADQKHDE 79
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVI 122
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L + + +
Sbjct: 80 LQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSE 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S ++ A + GE Q + + N+D++E++YL IK KT VLF A + +
Sbjct: 140 NAQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAY 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A
Sbjct: 200 ESGIKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFAL 259
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-L 301
Q + + ++ + L + ++ + + A Y +KA SL+
Sbjct: 260 QNDDNNHLHELVKI--EKDLTQDQLHEIENLVNHLGGVERAQKLADQYTEKALASLKKHW 317
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+ + + ++ L+R
Sbjct: 318 PDNENRALIEQLTGRLLKRQ 337
>gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae
ARSEF 23]
Length = 420
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 93/370 (25%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGD 62
K+M+ + I K + S + V KY + GK +RP++ L + + +
Sbjct: 55 VAKEMQFLTGNIRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATYLCPKNPQPE 114
Query: 63 NHV--------------------------------------------LLACAIEFIHTAT 78
LA E IHTA+
Sbjct: 115 TVHSARAIDSSISPVTILADVNPSAMPLTSNEPEMKDGNLDILPSQRRLAEITELIHTAS 174
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALE 131
LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + +
Sbjct: 175 LLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHVEVVELLATVIA 234
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + R K + T YL KTA L S + ++L+ +
Sbjct: 235 NLVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRAAALLGNADATTV 294
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ A+++ +
Sbjct: 295 DAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGKPAGADLELGLATAPLLFAWKQNPELGA- 353
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ +++KA ++ ++ + T A Y +KA ++ P+S K L+
Sbjct: 354 ----LVGRKFEREGDVEKARDLVLKSDGIEQTRALAQDYSEKAIAAIADFPESEAKDGLI 409
Query: 312 EVVDFCLQRL 321
E+ ++R
Sbjct: 410 EMAQKTIKRQ 419
>gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa
102]
Length = 449
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 93/370 (25%), Positives = 149/370 (40%), Gaps = 61/370 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGD 62
K+M+ + I K + S + V KY + GK +RP++ L + + +
Sbjct: 84 VAKEMQFLTGNIRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATYLCPKNPQPE 143
Query: 63 NHV--------------------------------------------LLACAIEFIHTAT 78
LA E IHTA+
Sbjct: 144 TVHGARAIDSSISPVTILADVNPSAMPLTSNEPEMKDGKLDILPSQRRLAEITELIHTAS 203
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALE 131
LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + +
Sbjct: 204 LLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHVEVVELLATVIA 263
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + R K + T YL KTA L S + ++L+ +
Sbjct: 264 NLVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRAAALLGNADATTV 323
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ A+++ +
Sbjct: 324 DAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGKPAGADLELGLATAPLLFAWKQNPELGA- 382
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ +++KA ++ ++ + T A Y +KA ++ P+S K L+
Sbjct: 383 ----LVGRKFEREGDVEKARDLVLKSDGIEQTRALAQDYSEKAIAAIADFPESEAKDGLI 438
Query: 312 EVVDFCLQRL 321
E+ ++R
Sbjct: 439 EMAQKTIKRQ 448
>gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase
[Candidatus Kuenenia stuttgartiensis]
Length = 327
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/326 (21%), Positives = 139/326 (42%), Gaps = 8/326 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ED K++ ++ + I D E + + + Y + + GKR+RP + L T L +
Sbjct: 3 IEDSIRTYGAKIDDMLRELIPVDEENYLSEPIWYHMNTKGKRVRPAICLITCEALGGNPE 62
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
N + A AIE +H L+HDD+ D +RR + + +G ++ GD+LL+ A+ +
Sbjct: 63 NALSFALAIEVLHNMFLMHDDIEDGDTVRRDQPTVWVKYGTANAINAGDYLLACAYKSTL 122
Query: 123 ETKSQEALEAL-----SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ +L EG+ ++ T Y+ +++ KT + +
Sbjct: 123 ASPVAPEKRLKLLEALTLTYGKTVEGQALDINARAAESFTVAAYMKMVELKTGYYLACGM 182
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG-KPTL 236
+++AG N V + + G N+G AFQ+ DD++D G +
Sbjct: 183 VGGAIVAGASNEVVEKIWMLGKNMGPAFQIRDDLIDLTHGKGRGGVIGSDIKEGKASFLY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L G +++K + + ++++ + R A+ + A + Q+A
Sbjct: 243 SYVLQIASGEQKKKLREIMLKPREETTADDIEWVLDVYRRYDAMKYAQDYAENLVQQAYK 302
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ +P K E+ F QR++
Sbjct: 303 TINEIPV-DDKTIFKEIASFMAQRMS 327
>gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
Length = 325
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 11/326 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ +++K + + + + +KY++ GGKRLRP+LTL +
Sbjct: 5 IEQLREVIKAELDK-----QEYVEEPYS-LFEPIKYIMEDGGKRLRPVLTLMAYNLYRDD 58
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A IE H TLLHDDV+DD+ LRRG+ W + ++L GD A+
Sbjct: 59 IGKALKSAIGIEIFHNYTLLHDDVMDDAELRRGRQTVHKKWNSNVAILSGDAAAITAYKY 118
Query: 121 VIETKSQE---ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + ++ + VA + +G+ + DVTEE+Y+ +I KT+VL + ++
Sbjct: 119 IETCEDPYLRRVIDGFNQVAMDVCKGQQYDMEFETRDDVTEEEYIQMIYLKTSVLIAGSM 178
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+LIAG + L +G LG+ FQL DD LD G+V E GK IG D K T
Sbjct: 179 RHGALIAGAPEHEYKELYDFGGYLGLVFQLQDDYLDVYGDVEEFGKKIGGDILCNKKTYL 238
Query: 238 VILAFQRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+I AF+ ++ +K K + K + E +K+ I + + Y +K++
Sbjct: 239 LIKAFELASEEDKALLKEWVVKEKFNPQEKIKEVTEIYNRSGVKEALRAKVDDYLEKSRI 298
Query: 297 SLRCLPDSSWKKS-LMEVVDFCLQRL 321
+L + +K E++DF +R
Sbjct: 299 ALDKIEVPEERKVRFYEMIDFIGKRK 324
>gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
Length = 305
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 145/308 (47%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREILLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + T+ A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTDEETQEIYRLVHELGGVEKTQELATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
Length = 305
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKETLTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 321
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 170/315 (53%), Gaps = 2/315 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ +V + + + D + ++++ LI +GGKRLRP+L L A Y + + A
Sbjct: 7 ADVARVEDRLREEVRVDFPFVGEILQGLIEAGGKRLRPLLLLLAARPFNYVFERLLPAAV 66
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +HTA+L+HDD VD + LRRG+ ++ +T +L+GD++ +++ M T++
Sbjct: 67 GVELLHTASLIHDDTVDKAMLRRGRPTLNSLFNTETVILLGDYIFARSAMMAAATQNPRV 126
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++ + + +G+LR++ ++ L + +DY I KTA LF+ + E+ +++ +
Sbjct: 127 VQVFASSLAHICDGQLREIFTARELQQSIDDYRKRIFGKTASLFAGSAEMGAILGEANDE 186
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTK 247
AL+ +G +LG+AFQ+VDDVLD R +++GK G D R G TLP +L FQ RG
Sbjct: 187 QIDALRRFGGHLGMAFQIVDDVLDLRESTDQIGKPAGLDLRQGTITLPTMLFFQLNRGNG 246
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
R + + + E+ A ++RE+ AL A Y + AK+ LR +P +
Sbjct: 247 RHAELVRRVVGGHDATDEDYATATAVIRESGALEHALEIAAEYVRNAKEELRAIPAGEGR 306
Query: 308 KSLMEVVDFCLQRLN 322
L + D L R +
Sbjct: 307 DMLEVLADHSLSRTS 321
>gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
Length = 305
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKETLTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 87/335 (25%), Positives = 135/335 (40%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
L + + + + + S + E I + +KY + +GGKR+RP+L LA M
Sbjct: 43 DLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFND 102
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A ++E IHT +L+HDD+ LRRGK +++G ++L GD LLS
Sbjct: 103 GDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSD 162
Query: 117 AFCMVIETK---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+F V E S+ A LA G++ L T ED +
Sbjct: 163 SFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTH 222
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L A+ ++I G +A + + +N+G+AFQ+ DD+LD E+GK G+
Sbjct: 223 KTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGK 282
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P +L L A
Sbjct: 283 DEDTDKTTYPKLL--------------------------------------GLDGAREEA 304
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK SL D + +L+ + DF + R N
Sbjct: 305 ERLVAEAKKSLEPFGDRA--TALLALADFIINRKN 337
>gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
20707]
gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
20707]
Length = 327
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 4/321 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L +E + + SD ++ +++L S GK +RP++ A +
Sbjct: 8 QLLLPITDFVEAFEQDFRQSLQSDAPVLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQTN 67
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CM 120
+ + A IE +HTA+L+HDDV+D S RRG+ ++ N +VL+GD++LS AF +
Sbjct: 68 EQTLSAALVIELLHTASLIHDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLEL 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + E L ++ L+ GEL QLSLSK EEDY V+ KT LF A+ ++
Sbjct: 128 VSREHTPEMLRVVAQAGRDLSIGELMQLSLSKAHTYREEDYYAVVDRKTGALFEASAKLG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + G +G AFQL DD+ D ++GK G D GK +LP++
Sbjct: 188 ALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFD-YDTALDVGKPTGHDLIEGKVSLPLLY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
T E++ S + S ++ I E + TE + Q+A D LR
Sbjct: 247 VLNHATPTERDEIISYLQQPIGSDS-IEYLLRIANERGGIDYTERQIQHIHQEAIDLLRS 305
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
SS +++L + +R
Sbjct: 306 FTPSSTRETLERFITLLGERQ 326
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 85/331 (25%), Positives = 132/331 (39%), Gaps = 51/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V + + + ++ I + ++Y + +GGKRLRP+L LA ML
Sbjct: 12 SLAQYLQEQKTIVETALDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTA 71
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD+ +D+ LRRGK V+G ++L GD LLS AF
Sbjct: 72 AMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFE 131
Query: 120 MVIETKSQEALEALSLVACTLAEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
V T A L ++ ++ L DV E + KT
Sbjct: 132 YVARTPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFIHTHKTGA 191
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + +++AG + Q L Y N+G+AFQ+VDD+LD E+GK G+D
Sbjct: 192 LLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDLEA 251
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P + + ++ A
Sbjct: 252 QKVTYPSLW--------------------------------------GIEKSQAEAQKLV 273
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A SL P L + ++ + R N
Sbjct: 274 AEAIASLE--PYGEKANPLKALAEYIVNRKN 302
>gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735]
gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735]
Length = 323
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ KVN + + VKY++ GGKR+RP+L L + + + ++ ++ ACA
Sbjct: 7 LVKVNDFLDNLKYDRKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMPACA 66
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ +RRG W T++L GD +L A+ + +
Sbjct: 67 LETYHNYTLLHDDLMDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCNPVYLS 126
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L T + EG+ + DVTE++Y+ +I+ KT+VL + A ++ +++AG
Sbjct: 127 DVLHTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLACAQKIGAILAGAS 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK +G D K T +I A+ R
Sbjct: 187 KQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKLGGDIICNKKTYMLINAYNRADA 246
Query: 248 REKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ + + S E + I + + Y +++K L + S
Sbjct: 247 EQRRELQHWMEAETFNSDEKVAAVTAIYNKVGVDKLAIEKIAYYFEESKKYLDAVQVSDE 306
Query: 307 KKS-LMEVVDFCLQRLN 322
+K+ L + R N
Sbjct: 307 RKAELRLYAQKMMHRKN 323
>gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115]
Length = 318
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 9/316 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNHVLL 67
+ + + S VE I + L+ +GGKR RPM+TL A L + + L
Sbjct: 6 AAFETRLREVLRSRVEFIELIGDDLVAAGGKRTRPMITLLAAQALGVGPGSSQWPEVIDL 65
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+E +H+A+LLHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ S
Sbjct: 66 GVCVELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTLLAGMPSG 125
Query: 128 EALEALSLVACTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
AL + Q ++ D E YL++I KTA L A +++ G
Sbjct: 126 TALTRAFGETASQICEGEVLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGS 185
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ R+AL ++G G+AFQ+ DD+LD GE N +GK +G D R GK TLP +
Sbjct: 186 SEAQREALATFGREYGLAFQMQDDLLDLAGEENVIGKPVGGDLREGKATLPTL---LMLD 242
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + ++++ ++ E+ AL T ++A ++L LP +
Sbjct: 243 GPHADEVREVLERRAAQPGDVQRMQLLAGESGALERTREEIRVRARRAAEALDSLPPTEA 302
Query: 307 KKSLMEVVDFCLQRLN 322
+ L+ + ++R++
Sbjct: 303 RDVLLSLAYRQIERMH 318
>gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
Length = 323
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EMMERIALDLEGVERALASSFNTGSEDFNTLIRPLSEAGGKRLRAQLCLLIANAGTSVEA 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ GN+ ++L GD+L ++AF +V
Sbjct: 68 ERIKIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAFRIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E E L+ S + L EGE Q+ +D + Y+ + KTA +E+ L
Sbjct: 128 EMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + LK YG LG+AFQ+ DD++DYR + GK +G D R G T P++
Sbjct: 188 LGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + +N G ++ + + +T A Y A +L+ +
Sbjct: 248 NESNQNQLLQDIKNLNHGGNE----QEIIDYVIAQGGIDNTLRVAQQYCDDALSALQSIR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V R
Sbjct: 304 DFDGKEFLVLAVQNLADRK 322
>gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
Length = 321
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + +L+ +GGKR+RPM +A +
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAPN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 63 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 182
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP
Sbjct: 183 LGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP- 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + E + +++ A E A +Y +KA + L
Sbjct: 242 ---VFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKKAGA-KPAEDIATAYLKKAVEIL 297
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP K L ++V +R
Sbjct: 298 DSLPQVPELKPLKQIVRVLDKR 319
>gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti
VCD115]
Length = 324
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 9/316 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNHVLL 67
+ + + S VE I + L+ +GGKR RPM+TL A L + + L
Sbjct: 12 AAFETRLREVLRSRVEFIELIGDDLVAAGGKRTRPMITLLAAQALGVGPGSSQWPEVIDL 71
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+E +H+A+LLHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ S
Sbjct: 72 GVCVELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTLLAGMPSG 131
Query: 128 EALEALSLVACTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
AL + Q ++ D E YL++I KTA L A +++ G
Sbjct: 132 TALTRAFGETASQICEGEVLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGS 191
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ R+AL ++G G+AFQ+ DD+LD GE N +GK +G D R GK TLP +
Sbjct: 192 SEAQREALATFGREYGLAFQMQDDLLDLAGEENVIGKPVGGDLREGKATLPTL---LMLD 248
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + ++++ ++ E+ AL T ++A ++L LP +
Sbjct: 249 GPHADEVREVLERRAAQPGDVQRMQLLAGESGALERTREEIRVRARRAAEALDSLPPTEA 308
Query: 307 KKSLMEVVDFCLQRLN 322
+ L+ + ++R++
Sbjct: 309 RDVLLSLAYRQIERMH 324
>gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
Length = 305
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora]
Length = 444
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 95/375 (25%), Positives = 147/375 (39%), Gaps = 61/375 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L L +M+ + I K + S + KY + GK +RP++ L +
Sbjct: 74 IDPLR-LVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALC 132
Query: 57 -----------------------------LEYRG---------------DNHVLLACAIE 72
+ LA E
Sbjct: 133 PKAPQRQQSTLQASAAIDTSISPLNILSDFNPSAATPASETTPADTDILPSQRRLAEITE 192
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----- 127
IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + +
Sbjct: 193 LIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVEL 252
Query: 128 --EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L + R K + T YL KTA L S + S+L+ G
Sbjct: 253 LATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGG 312
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 313 ADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTM 372
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + +A ++ ++ + T A Y +KA +++ P+S
Sbjct: 373 PELGP-----LVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPESE 427
Query: 306 WKKSLMEVVDFCLQR 320
K L+E+ L+R
Sbjct: 428 AKDGLIEMAVKTLKR 442
>gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 262
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 111/263 (42%), Positives = 162/263 (61%), Gaps = 2/263 (0%)
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
GD+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F
Sbjct: 2 EGDDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFE 61
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+
Sbjct: 62 MMVELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHS 121
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I
Sbjct: 122 AAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLI 181
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ G+ + + I G + E+L+ + AL T A Y +A L
Sbjct: 182 YTMREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLD 239
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP S ++ +L+E+ +F + R +
Sbjct: 240 ALPPSEYRDALVELSEFAVARTH 262
>gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
Length = 305
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella
sp. 3_1_44]
gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella
sp. 3_1_44]
Length = 323
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLEHVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ L
Sbjct: 128 EMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ Q S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGDWQESEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
G K + +N+G + + + +T A Y + A +L +
Sbjct: 248 NDGNKDKLLEEIKGLNNGGNEQD----IIDYVIAQGGIDNTLAVADKYCKDALAALAAVR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V+ R
Sbjct: 304 DFPGKEFLVMAVENLADRK 322
>gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 311
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML----EYRGDNHVLLACAIE 72
+ + + S+V + +Y G GKR+RP + L A L LA E
Sbjct: 1 MRRAVTSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTNEPGDVRRRQQRLAEITE 60
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IH A+LLHDDV+D +A RRG A L GN+ ++L GDFLL++A + ++ E +
Sbjct: 61 LIHVASLLHDDVLDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRNTEVIAL 120
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
LS V L GE+ Q++ + + + Y KTA L + + + L+ G + +
Sbjct: 121 LSRVLEHLVTGEVMQMTAKADRLTSFDHYFQKTYFKTASLIANSAKAIVLLGGHDVTTAE 180
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ YG +LG+AFQ DDVLD+ G + +GK D R G T PV+ A E
Sbjct: 181 SAYQYGRHLGLAFQFQDDVLDFTGTGSVLGKPTLGDLREGIATAPVLFA-----AEEHEG 235
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS------W 306
+ I +V +++ A ++ ++ + T+ A + +A ++ LP
Sbjct: 236 LGALIERRFKNVGDVETAHDWVKRSKGIERTKALAREHSAEAVRAIESLPPIDCPHAMRC 295
Query: 307 KKSLMEVVDFCLQRL 321
+K L E+ + R+
Sbjct: 296 RKGLKELAYMAVNRI 310
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 309
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 52/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + +V + + + I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 18 DLSTYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTM 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E +HT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 78 EMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGLLAYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V E + V L ++ L D+ EE ++ KT
Sbjct: 138 YVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYIHTHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + ++AG ++ + L Y N+G+AFQ++DD+LD E+GK G+D +
Sbjct: 198 ALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELGKTAGKDLQ 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L ++ +A
Sbjct: 258 AQKATYPSLW--------------------------------------GLEASKAKAQEL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++A L + L+ + +F R
Sbjct: 280 IEEAIAQLEPF--GERSQPLIALANFITART 308
>gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
NIH2624]
gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
NIH2624]
Length = 449
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 91/373 (24%), Positives = 145/373 (38%), Gaps = 64/373 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA----------LM 56
+ K+++ + I + + S + V KY S GK +RPML L +
Sbjct: 80 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPMLVLLMSQATALTPRKSRA 139
Query: 57 LEYRG------------------------------------------DNHVLLACAIEFI 74
LA E I
Sbjct: 140 NGASSSVTVNDPITAPSILADNNPDLNPLVSSSLEAKYDFTGDENILPTQRRLAEITELI 199
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E L+
Sbjct: 200 HTASLLHDDVIDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLA 259
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-------Q 187
V L EGE QL + + I+ + + S
Sbjct: 260 TVIANLVEGEFMQLKNTAADEKHPVFTDETIEYYLQKTYLKTASLISKSCRAAALLGDST 319
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V ++ +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++ +
Sbjct: 320 PEVVESAYAYGRNLGLAFQLVDDMLDYTVTDAELGKPAGADLELGLATAPLLFAWKESPE 379
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ ++++A ++ + + T A Y KA ++ PDS K
Sbjct: 380 LGP-----LVGRKFSQEGDVQRARELVVKCDGVEKTRQLAQEYADKAVAAISGFPDSEAK 434
Query: 308 KSLMEVVDFCLQR 320
L+++ + + R
Sbjct: 435 AGLIQMCEKTMNR 447
>gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411]
gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411]
Length = 316
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 9/319 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
L+ KD++ VN + I + + V + +I GKRLRP+L L +A L
Sbjct: 4 KLKLAIKKDIKAVNEALAVLIKPESNLTRKVYEQVI-GDGKRLRPLLVLYSASALGIDEP 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +++ A+E IHTA+LLHDD++DD+ RRGK A+ V+G + +V+ GD+L S A+ +
Sbjct: 63 KDALVVGSAVELIHTASLLHDDIIDDALYRRGKPASHTVYGIKPAVMGGDYLYSLAY-NI 121
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + +A+S A L+EGE+ ++ + +++ +DY VI KTAVL A+ E +
Sbjct: 122 VLDYDVDVAKAISRAAYILSEGEIEEIEQAFKVNIGFDDYYRVIYKKTAVLIEASCESGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ K YG NLG+AFQ+ DD LDY+ + +GK++G D + GK TLPV+ A
Sbjct: 182 IL--ANKQFSPVFKEYGKNLGLAFQIKDDCLDYQADPEVLGKDVGIDLKEGKITLPVLYA 239
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ L + ++E + L +A + KAK++L+ L
Sbjct: 240 MDEDPLLKEKIADFFDKK---DESVLADIVLSVKE-KGLNKALDKAKEFSVKAKETLKGL 295
Query: 302 PDSSWKKSLMEVVDFCLQR 320
DS++K L + D+ ++R
Sbjct: 296 KDSTYKGYLEAIADYAIER 314
>gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
HTCC2155]
gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
HTCC2155]
Length = 360
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 82/353 (23%), Positives = 144/353 (40%), Gaps = 42/353 (11%)
Query: 9 LKDMEKVNFLILKRI-------CSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + ++ Y +GGKRLRP L L +A ++
Sbjct: 7 KSDLSSIASQIDSYLLEHPFPNTVSPSWLGNEMSSY-TKNGGKRLRPALCLWSAALVSDC 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL------------------VWG 102
+ +A A E HT TL+HDD++D A RRG + +G
Sbjct: 66 PELATSVASAAEIFHTWTLVHDDIIDRDATRRGLPTSHTALADFARKEHGSEGDNADHFG 125
Query: 103 NQTSVLVGDFLLSQAFCMVIETKS-----------QEALEALSLVACTLAEGELRQLSLS 151
++L GD + A +V E + + L + E +
Sbjct: 126 LSMAILTGDLQQAWALRLVSEQANKDLTSGTALAVMDRLLSHVYPVLLGGEAIDVEFEHR 185
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI----AGVQNSVRQALKSYGMNLGIAFQL 207
+ ++ E+ L +++ KTA L + + ++ + + + N G+AFQL
Sbjct: 186 EIDSISPEEILKMLEMKTACLLEFSAQAGVVVGLELDSFDHDLVHHAGQFAYNAGLAFQL 245
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+L + E+GK +G D K TL ++ + +K F + +IS E L
Sbjct: 246 QDDILGVFADEKELGKPVGSDIAARKVTLLIVETIKMTKADDKKFILDLLGSNQISSEQL 305
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A I++ AL + Y Q A++ L LP+S K+ L E+ F ++R
Sbjct: 306 QQAAEIIKTCGALSKIQAMMDQYVQAAEEHLAKLPNSPAKERLKELAHFMIKR 358
>gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 349
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + + + E + ++L+ +GGKR+RPM+TL + V A +
Sbjct: 39 LAALEEHLTRATEDAEEKLRAAARHLVSAGGKRIRPMVTLLSCGACGGDMRAAVPYAVSA 98
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E H+ATLLHDDV+DD LRRG+ A+R++WGN SVL GD+LL++A +V ++ A
Sbjct: 99 ELTHSATLLHDDVIDDGPLRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSAAL 158
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L L EGE+ QLSL + TE+DYL V+ KTA LF A + AG +
Sbjct: 159 PPLLATMRRLVEGEVLQLSLRSSFSATEKDYLDVVIGKTASLFGWAAAAGAWAAGQVGRI 218
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+AL +G +GIAFQLVDD LDY + +GK +G D GK TLP ++ R +
Sbjct: 219 PEALVQFGEGIGIAFQLVDDALDYAADPQLLGKRLGTDLIEGKATLP-LIRACEAEPRLR 277
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + +++ + D A + + + +L +PD +++L
Sbjct: 278 ERLAALVEGQDDGDAVAADVVEVVKRVGGVEDARALAREHTRTSLAALEEVPDGVHRRAL 337
Query: 311 MEVVDFCLQR 320
E +R
Sbjct: 338 REAAVSLTER 347
>gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
Length = 338
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---- 63
KDM +++ +IL + S ++ ++ GK LRP + D
Sbjct: 21 VQKDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFG-AFGPDADQKHDE 79
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVI 122
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L++ + +
Sbjct: 80 LQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLSE 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S ++ A + GE Q + + N+D++E++YL IK KT VLF A + +
Sbjct: 140 NAQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAY 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G + + K +G LG AFQL DD+LDY + K + D ++G + P+I A
Sbjct: 200 ESGTKVTKALKTKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFAL 259
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-L 301
Q + + ++ + L + ++ + + A Y +KA SL+
Sbjct: 260 Q--NDDNNHLHELVKMGKDLTQDQLHEIENLVNHLGGVERAQKLADQYTEKALASLKKHW 317
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PD+ + + ++ L+R
Sbjct: 318 PDNENRALIEQLTGRLLKRQ 337
>gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATA-------------LMLEYRGDNHVL 66
+ ++V ++ +Y G GKR RPM+ L + L+ +
Sbjct: 1 MVTAEVPVLAMAAEYFFKLGVEGKRFRPMVLLLMSTSLMTSPSHGLQDLIFDDLRLRQQR 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A E IH A+LLHDDV+D + RRG + V GN+ +VL GDFLL++A + ++
Sbjct: 61 IAEITEMIHVASLLHDDVLDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALASLRN 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E +E LS V L GE+ QLS+ + Y+ KTA L + + + +++AG
Sbjct: 121 TEVVELLSQVLEHLVTGEIMQLSVEDKDMSNMDYYMQKTFYKTASLMANSCKAIAVLAGQ 180
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
V +YG +LG+A+QLVDD LDY G +GK D G T PV+ A +
Sbjct: 181 PEDVALLAFNYGRHLGLAYQLVDDALDYTGTTKTLGKPALSDLGQGIVTAPVLFALKEFP 240
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS- 305
+ I +V ++ +A +++E+R + T A + +KA D++ LP +
Sbjct: 241 E-----MSKLIQRKFKTVTDINQAVEMVKESRGIAQTHALAAEHARKAVDAIANLPPNPS 295
Query: 306 -----WKKSLMEVVDFCLQRL 321
+++L+++ + R
Sbjct: 296 LHVQQCRRALIDIAHQVITRS 316
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 86/332 (25%), Positives = 138/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + ++ V + I I + ++Y + +GGKRLRP+L LAT +
Sbjct: 25 DLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPILCLATCELSGGNI 84
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ RRG++ V+G ++L GD LLS AF
Sbjct: 85 EMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFE 144
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V+ + + V L + ++ L+ V+E+ + KT
Sbjct: 145 FVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTLHFIHTHKTG 204
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ +++A V + L+ Y N+G+AFQ+VDD+LD E+GK G+D
Sbjct: 205 ALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEELGKTAGKDIE 264
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T PVI L + ++A
Sbjct: 265 AKKATYPVIW--------------------------------------GLEKSRFQAQKL 286
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KAK L D L+ + DF + R N
Sbjct: 287 VEKAKAELEVFGDKVM--PLIALADFIISRSN 316
>gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
Length = 348
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L+ R
Sbjct: 12 SLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPE 71
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 72 ALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 131
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ S + + Y+
Sbjct: 132 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTAARYSMDYYMQKTY 191
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 192 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSL 251
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A + + + + N+ A + +++ +
Sbjct: 252 SDIRHGVITAPILFAMEEFPQLREVVDQVA-----ADPRNVDIALEYLGKSKGIQRAREL 306
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 307 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITR 346
>gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. cremoris MG1363]
gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II
[Lactococcus lactis subsp. cremoris MG1363]
gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. cremoris NZ9000]
Length = 319
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 9/314 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ +V+ L+ + + + + +GGK LRP L + + + L
Sbjct: 14 LEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLAL 73
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A ++E +HTATL+HDDV+D + RRG +G + +V GD+L F ++ E +
Sbjct: 74 AASVEMMHTATLVHDDVIDHADTRRGVATLSAKYGPEIAVYAGDYLFIAVFRLMSEHSLE 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ + G D S A + +
Sbjct: 134 LSNLTKNIGSIERLLGGELGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKN 193
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
N++ + GMN+GI+FQ++DD LDY +GK + ED + G + PV+ A Q
Sbjct: 194 NALTKRAYKIGMNIGISFQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQENNA 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I E + + ++ + AL T+ A SY A + + LP +
Sbjct: 254 LV---------SELIKNEKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGENR 304
Query: 308 KSLMEVVDFCLQRL 321
+ + E+ L+R
Sbjct: 305 ELIAEITRKLLERT 318
>gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
fischeri NRRL 181]
gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
fischeri NRRL 181]
Length = 451
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 93/372 (25%), Positives = 147/372 (39%), Gaps = 63/372 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 83 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRP 142
Query: 57 --------------------------------------LEYRG---DNHVLLACAIEFIH 75
+ LA E IH
Sbjct: 143 NDVAPISVNDPISSPSILADTNPDTNSLVSQSAEAQYDFAGDENILPSQRRLAEITELIH 202
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E L+
Sbjct: 203 TASLLHDDVIDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLAT 262
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-------QN 188
V L EGE QL + + I + + S
Sbjct: 263 VIANLVEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTP 322
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V +A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ A+++ +
Sbjct: 323 EVVEAAYSYGRNLGLAFQLVDDLLDYTVSAVELGKPAGADLELGLATAPLLFAWKQNPEL 382
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ ++++A I+ ++ + T A Y KA ++ PDS K
Sbjct: 383 GP-----LVGRKFSQEGDVQRAREIVYKSDGVEQTRALAQEYADKAVAAISDFPDSEAKS 437
Query: 309 SLMEVVDFCLQR 320
L+++ + + R
Sbjct: 438 GLIQMCEKTMNR 449
>gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
Length = 319
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 149/321 (46%), Gaps = 5/321 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K++ + + + + SDVE I + L+ +GGKR+RP L + L
Sbjct: 3 VKVVTSDLEPLLNTFEEYLRELVRSDVEFIRLIEDDLVTAGGKRVRPQLAFLASRALGGV 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+E +H+ TLLHDD+VDD+ RRG VAA +GN SVL GD+LLS+ +
Sbjct: 63 PYE-MELALAVELLHSTTLLHDDLVDDAETRRGHVAAFRKYGNAVSVLAGDYLLSRLLYL 121
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ T E + S VA LAE E+ Q ++ D + E Y +I KTA L A E +
Sbjct: 122 LSITGRMELVYMFSEVARELAESEVLQFQIAALGDYSFEAYERIITGKTASLMRLACEGA 181
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + RQAL +G+ G AFQ+ DD LD G +GK IG D R GK T +
Sbjct: 182 AVLGNAPSEWRQALADFGLFYGQAFQMRDDYLDLMGTPETLGKPIGGDVREGKLTAITLR 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ E+++ + + +A +L
Sbjct: 242 L----LDIYPQETLEILHRRGADPEDIEILRKLAVAAGVDREVVQSIQGRIDRAVAALSA 297
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S +++L + RL
Sbjct: 298 LPPSPSREALEVLAKREASRL 318
>gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays]
gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays]
Length = 407
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 103/328 (31%), Positives = 164/328 (50%), Gaps = 12/328 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----- 55
+ L ++ D+ +N + + ++ ++ + + +GGKRLRP L +
Sbjct: 84 VSALLEVVSNDLLNLNNNLKSLVGAENPVLVSAAEQIFSAGGKRLRPALVFLVSRATAEL 143
Query: 56 -MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+
Sbjct: 144 AALPELTTEHRRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMF 203
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+Q+ + ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +
Sbjct: 204 AQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLIA 263
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG-EDFRNGK 233
A+ +++ +GV + V + + YG NLG+AFQ+VDD+LD ++GK D G
Sbjct: 264 ASTRSAAIFSGVGSGVCEQMYEYGRNLGLAFQVVDDILDLTQSAEQLGKPAAGSDLAKGN 323
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T PVILA + + G L A ++ + A G
Sbjct: 324 LTAPVILALREEPRLRGIIESEFCEPGS-----LAAAVELVHRGGGIRSARELAEEKGGL 378
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A SL+CLP S ++ +L VV + LQR+
Sbjct: 379 ALRSLQCLPRSEFRSALERVVHYNLQRV 406
>gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
Length = 349
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 88/331 (26%), Positives = 161/331 (48%), Gaps = 24/331 (7%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPM--------------LT--LATAL 55
E VN I + + + + +YL+ +GGKRLRP L+ +
Sbjct: 20 ELVNEAIPEELPVQQPERLYEASRYLLDAGGKRLRPAVLLAAAEALADVEPLSTDYRSFP 79
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
L + + A ++E I + TL+HDD++DD LRRG A + +T++L GD L S
Sbjct: 80 TLSGEEIDMMDAAVSVEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLETAILAGDTLYS 139
Query: 116 QAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+AF +++ET + + + + EG+ ++ K +V E+YL +++ KTA
Sbjct: 140 KAFEIMLETGADPSRMVDALDVLATTCTKICEGQALDVTFEKRDNVAPEEYLEMVEQKTA 199
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
VL++A+ + +++ G AL YG+++G AFQ+ DDVLD +++GK G D
Sbjct: 200 VLYAASACLPAILQGADQETIDALYGYGLDIGRAFQIQDDVLDLTVPSDKLGKQRGSDLV 259
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K TL + A ++G E ++ ++ + A + + ++ A
Sbjct: 260 EEKQTLITVHAREQGVDIEGLVDTEDVDA--VTEAEIDDAVAELEKVGSIDYANETARDL 317
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++ K+ L LPD+ ++ L E+ D+ ++R
Sbjct: 318 VEQGKNRLSVLPDNEARELLCEIADYLIERS 348
>gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 365
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 4/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
M KV L+ + + +I ++L+ +GGKR+RP+L L T+L+ E D+ +
Sbjct: 51 ISIGMAKVEKLLRDALANSDPLIDASSRHLVEAGGKRVRPLLVLLTSLLGEGVNDDVIKA 110
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+D + +RRG A VWGN ++L GD + ++A +
Sbjct: 111 AAVVELTHLATLYHDDVMDSAPMRRGAPTAHEVWGNSVAILAGDLIFARA-SVFGSELGP 169
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
EA+ S L G+L + + D E ++ VI KTA L S + + G
Sbjct: 170 EAVMWQSRTFERLCLGQLHESIGPREGDDVIEHHIQVISDKTASLLSTSGAFGARFGGAS 229
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-- 245
L+ YG +G+AFQ+ DDV+D + + GK G D R G PTLP++L Q
Sbjct: 230 EF-IDVLREYGEKVGVAFQVADDVIDLASKEADSGKTPGTDLREGVPTLPILLLRQAAAN 288
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++ S E L A + ++A+ D A + A L LP+ +
Sbjct: 289 GDVQAQQAIELVDADLTSDEALAAAVEAVTAHQAIHDAWKAARQWADDAIAVLAPLPEGT 348
Query: 306 WKKSLMEVVDFCLQR 320
K++L+ D + R
Sbjct: 349 VKQALISFADAVVTR 363
>gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
Length = 324
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 5/307 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+ I + + + ++Y++ GGKR+RP+LTL A + + + A A+E H +L
Sbjct: 17 NQNIHKEPTNLYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVEVFHNFSL 76
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+HDD++DD+ LRRG+V W T +L GD +L A+ + + + + L + T
Sbjct: 77 VHDDIMDDAPLRRGQVTVHEKWDLNTGILSGDAMLILAYQYFEQYEPEVFRDLAKLFSKT 136
Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ EG+ + + +VT +YL +I+ KTAVL +AA+++ +++A +
Sbjct: 137 ALEVCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGAIVAKTSEKEGDLIYD 196
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G+NLG+AFQL DD LD G+ GK +G D K T + A + T + + +
Sbjct: 197 FGLNLGLAFQLQDDYLDAFGDPETFGKQVGGDIIENKKTYLYLKALEFSTPEKASELEKL 256
Query: 257 IN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK-SLMEVV 314
+ + + E ++ A I E+ A T+ Y KA ++L + ++ KK L
Sbjct: 257 FSLQLEDNSEKIETAKAIFNESGASKSTQEAIEMYTFKAFETLEKMDINAEKKNILRTFG 316
Query: 315 DFCLQRL 321
+ + R
Sbjct: 317 ENLMGRK 323
>gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
Length = 326
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
+ ++ V LI KR+ I + + L +GGK LRP + +
Sbjct: 11 IDQHIKLVCQLIEKRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSFGPKEKQDSEQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG+V + +G +V GDFL + F ++
Sbjct: 71 TKIAASLEILHMATLIHDDVIDDSPLRRGQVTVQTQFGKDIAVYTGDFLFTIFFELILET 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + GEL Q+ L N + + DYL I KTA LF A +
Sbjct: 131 MQDSPYMSINAKAMKKILVGELDQMHLYFNQEQSIRDYLRSISGKTAELFRLASLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G V G ++G+ FQ++DD+LDY + + K I ED NG +LP++ A +
Sbjct: 191 GGASPDVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNKPILEDITNGVYSLPLLFAIK 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
F + +++ E L+ ++ +N + + A Y QKA D ++ LP
Sbjct: 251 ---NNPNAFKELLDKKDQLTAEELRTIAQLVLDNHGVEKAQELARQYTQKAIDDIKALPK 307
Query: 304 SSWKKSLMEVVDFCLQRL 321
+K L+++ + L+R
Sbjct: 308 IKVQKQLLQLTNHLLKRK 325
>gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str.
Silveira]
Length = 472
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 101/376 (26%), Positives = 162/376 (43%), Gaps = 67/376 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--------------- 51
+ K+++ + I + + S ++ V KY S GK++RP+L L
Sbjct: 100 MVAKELKFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSPQD 159
Query: 52 ----------------------------ATALMLEYRG------------DNHVLLACAI 71
TA M + LA
Sbjct: 160 RQILNTEGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEIT 219
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E
Sbjct: 220 ELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTE 279
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIA 184
L+ V L EGE QL + + +I K+A L S + ++L+
Sbjct: 280 LLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLG 339
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
V +A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 340 QTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLLFAWRS 399
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++G +++ A I+ ++ L T A Y KA +++ PDS
Sbjct: 400 HPELGALVGRKFCHEG-----DVQLARQIVAQSDGLEQTRALAQEYADKAVEAISIFPDS 454
Query: 305 SWKKSLMEVVDFCLQR 320
K+ L+++ + + R
Sbjct: 455 EAKRGLIDMCEKVMTR 470
>gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 472
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 101/376 (26%), Positives = 162/376 (43%), Gaps = 67/376 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--------------- 51
+ K+++ + I + + S ++ V KY S GK++RP+L L
Sbjct: 100 MVAKELKFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSLQD 159
Query: 52 ----------------------------ATALMLEYRG------------DNHVLLACAI 71
TA M + LA
Sbjct: 160 RQILNTEGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEIT 219
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E
Sbjct: 220 ELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTE 279
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIA 184
L+ V L EGE QL + + +I K+A L S + ++L+
Sbjct: 280 LLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLG 339
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
V +A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 340 QTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLLFAWRS 399
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++G +++ A I+ ++ L T A Y KA +++ PDS
Sbjct: 400 HPELGALVGRKFCHEG-----DVQLARQIVAQSDGLEQTRALAQEYADKAVEAISIFPDS 454
Query: 305 SWKKSLMEVVDFCLQR 320
K+ L+++ + + R
Sbjct: 455 EAKRGLIDMCEKVMTR 470
>gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS]
Length = 472
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 101/376 (26%), Positives = 162/376 (43%), Gaps = 67/376 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--------------- 51
+ K+++ + I + + S ++ V KY S GK++RP+L L
Sbjct: 100 MVAKELKFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSPQD 159
Query: 52 ----------------------------ATALMLEYRG------------DNHVLLACAI 71
TA M + LA
Sbjct: 160 RQILNTEGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEIT 219
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E
Sbjct: 220 ELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTE 279
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIA 184
L+ V L EGE QL + + +I K+A L S + ++L+
Sbjct: 280 LLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLG 339
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
V +A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 340 QTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLLFAWRS 399
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++G +++ A I+ ++ L T A Y KA +++ PDS
Sbjct: 400 HPELGALVGRKFCHEG-----DVQLARQIVAQSDGLEQTRALAQEYADKAVEAISIFPDS 454
Query: 305 SWKKSLMEVVDFCLQR 320
K+ L+++ + + R
Sbjct: 455 EAKRGLIDMCEKVMTR 470
>gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
43063]
gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
43063]
gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 350
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--- 60
LE ++ + ++++ + E +V +L +GGKR+RP+LTL + +
Sbjct: 24 LETKLRDALDDIEQMLVQETQTQREKTSALVSHLRAAGGKRMRPLLTLLVSQLGAPNQPV 83
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A A+E H A+L HDD++D++ +RRG AA + W N +V+ GD + S+A +
Sbjct: 84 SSQVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLL 143
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V + + S L +G++R + + D E Y+ V++ KT L A
Sbjct: 144 VS-GLNPTIVAQHSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGCAALYG 202
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP--- 237
+ ++G + A+ +G +LG+AFQ+ DDVLD + + GK G D R+G T P
Sbjct: 203 AELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEAQSGKTPGADLRDGTKTFPVLL 262
Query: 238 ---VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ + D L + + + +T+ A + ++A
Sbjct: 263 LEKTVQDGRDTGPDRALLQAIADTDALQDDAVLAQVTAQLAAHPVTEETKRLAGEWVERA 322
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L+ +PDS K++L+E + RL
Sbjct: 323 LAHLQNIPDSEVKRALVEFAHLQINRL 349
>gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 322
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 16/329 (4%)
Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MK LE + + +N + + + D ++Y + GGKR+RP+LTL + +
Sbjct: 1 MKSLEQYTRFIEEKIAGIN------LEEEPRKLYDPLRYFLSLGGKRMRPILTLISGELF 54
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + + A IE H +L+HDD++D++ +RRGK + W + ++L GD L +
Sbjct: 55 QISNEESLSAALTIELFHNFSLIHDDIMDEAPVRRGKPTVHIKWNSSVAILSGDVLFVEG 114
Query: 118 FCMVIETKSQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + + + A + +G+ + DVTEE Y+ +I+ KT+VL
Sbjct: 115 YQQLAKYTDKRLPILLKRFNETAIEVCQGQQLDMDFESRDDVTEEAYIEMIRLKTSVLLG 174
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
ALE +++ R L +G++LGIAFQ+ DD+LD G+ GK +G D + K
Sbjct: 175 CALEFGAILGNQSEETRNHLYHFGVSLGIAFQIQDDILDLYGDPELFGKQVGGDILSNKK 234
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL + A + + + + + A + E A + Y +A
Sbjct: 235 TLLFLKAKAISEASKDARFGDLLQMAP-TDSKIASAKKLFEEIDAKNASLETMNGYYSEA 293
Query: 295 KDSLRCLPDSSWKK--SLMEVVDFCLQRL 321
+SL L +S + SL E+ +F + R
Sbjct: 294 INSLDQL-ESKGLELGSLRELANFLITRK 321
>gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 321
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 30/325 (9%)
Query: 22 RICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN---------------- 63
+ ++V + +Y G GKR RP + L A L
Sbjct: 1 MVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRT 60
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IH A+LLHDDV+DD+ RRG + ++ GN+ +VL GDFLLS+A +
Sbjct: 61 RQQCIAEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALA 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K+ E + L+ V L GE Q++ + V+ E YL KTA L S + + +L
Sbjct: 121 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIAL 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A
Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAI 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
E + + G + ++ A + ++R + T A + A +++ LP
Sbjct: 241 -----EEFPQLDAVVKRGLDNPADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDSLP 295
Query: 303 DS------SWKKSLMEVVDFCLQRL 321
+S +++L+++ + R
Sbjct: 296 ESGDEDVLRSRRALIDLTHRVITRT 320
>gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
Length = 305
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + I D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAIQIDNQEIQFAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKETLTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans]
Length = 941
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 97/378 (25%), Positives = 153/378 (40%), Gaps = 62/378 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
M + ++M+ + I + + S + V KY S GK +RPML L +
Sbjct: 86 MDPFQT-VAREMKFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALT 144
Query: 58 ----------------------------------------------EYRGDNHVLLACAI 71
+ LA
Sbjct: 145 PRGPSSRAGRIPSVDASISHPTILADENPARPCSSVRDDAAYTTADSDILPSQRRLAEIT 204
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + E E
Sbjct: 205 ELIHTASLLHDDVIDHSVSRRSAPSANIEFGNKMAVLAGDFLLGRASVALARLRDPEVTE 264
Query: 132 -------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L + R + + + T YL K+A L S + ++++
Sbjct: 265 LLATVIANLVEGEFMQLKNTARDETNPQWTEETVSYYLQKTYLKSASLISKSCRAAAILG 324
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 325 GSSDDVVEASYLYGKNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLATAPLLFAWKE 384
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + ++++A I+ ++ L T A Y KA ++ PDS
Sbjct: 385 DESLGR-----LVGRKFSGEGDVQRARDIVSQSSGLEQTRALAQEYVDKAIAAISFFPDS 439
Query: 305 SWKKSLMEVVDFCLQRLN 322
K+ L+E+ ++R N
Sbjct: 440 EAKQGLVEMCTKVMKRRN 457
>gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
Length = 323
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EMMERIALDLEGVERALASSFNTGSEDFNTLIRPLSEAGGKRLRAQLCLLIANAGTSVEA 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ GN+ ++L GD+L ++AF +V
Sbjct: 68 ERIKIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAFRIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E E L+ S + L EGE Q+ +D + Y+ + KTA +E+ L
Sbjct: 128 EMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + LK YG LG+AFQ+ DD++DYR + GK +G D R G T P++
Sbjct: 188 LGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + +N G ++ + + +T A Y A +L+ +
Sbjct: 248 NESNQNQLLQDIKNLNHGGNE----QEIIDYVIAQGGIDNTLRVAQQYCDDALSALQSIC 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D K+ L+ V R
Sbjct: 304 DFDGKEFLVLAVQNLADRK 322
>gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
Length = 305
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
Length = 334
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 20/337 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++ L K + + + DV + V Y I +GGKRLRP+LTLA A +
Sbjct: 1 MDIVTKLHQKYGGAIERALEHYLSIDVAPDFREEVLYQIKTGGKRLRPLLTLAIAEAVSG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL------ 113
+ + + A +E IH +L++DD++D +RRG R +G+ ++L+G +
Sbjct: 61 QWEPALPAATIVELIHNYSLIYDDIIDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIEE 120
Query: 114 --------LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
L A + K+ + E L ++ + ++ DVT EDY+H++
Sbjct: 121 AVLDTPKPLVFAKEVAKVIKAIDEGERLDILFEYAGRDDPY-FIKARKRDVTVEDYIHMV 179
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT VL +AA + L + + ++G+N GIAFQ++DDVLD G+ + GK I
Sbjct: 180 SLKTGVLIAAAAKWGVLSVSDSKELAETAWNFGLNAGIAFQIIDDVLDIYGDPKKFGKEI 239
Query: 226 GEDFRNGKP-TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D + K V +A + ++ S ++ ++ ++K A ++ +A +
Sbjct: 240 GKDIKEHKRGNAVVAIALSKLPHSDRERLLSILSKAEVGEADIKNAVALLDSVKAREEAL 299
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Y ++A+ L +P++ +L E++DF L+R
Sbjct: 300 SLAEKYRREAERYLENIPNN---GTLKELLDFILERQ 333
>gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
Length = 325
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 14/326 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L ++E++N S + + + Y++ GGKR+RP LTL +
Sbjct: 5 DEITQLISSEIEQIN-------WSKEPRGLYEPIGYVLSLGGKRIRPALTLMACNLFSDD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A IE H TLLHDD++D + +RRG+ W + T++L GD + ++
Sbjct: 58 VQSAMNTALGIEIFHNFTLLHDDIMDRADVRRGRPTVHKKWDDNTAILSGDVMQIASYQF 117
Query: 121 VIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
V +T + + S A + EG+ + DV ++YL +I+ KTAVL AAL
Sbjct: 118 VTKTPEKYLKKTLDLFSKTAAEICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLLGAAL 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + I G Q L +G+N+G+AFQL DD+LD G+ GK IG D K T
Sbjct: 178 QTGAWIGGAGEEDAQLLYDFGINIGLAFQLKDDLLDVYGDEATFGKKIGGDILCNKKTYL 237
Query: 238 VILAFQ--RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+I A + +G + E+ +++ +S E + + E + + KA
Sbjct: 238 LIHALELAKGNEAEELQKWLKLDNEDLSDEKILAVTSLYNRLGVDTICEDKMQYFYSKAI 297
Query: 296 DSLRCLPDSSWKK-SLMEVVDFCLQR 320
+L + KK L ++ + + R
Sbjct: 298 ANLEKVEVLDNKKHELRKLAEKLMFR 323
>gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613]
gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613]
Length = 305
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GDFL F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
DSM 15952]
gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
DSM 15952]
Length = 326
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
++ V + K++ + I D + +GGK LRP A + + +
Sbjct: 11 IQNKLQVVCSFLEKQLTVRNKDIQDALVEFSQAGGKYLRPAFFFLFAELGDPKKQNEEEL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A +IE +H ATL+HDD++DDS LRRG + + +G +V GD L + F ++I+
Sbjct: 71 IKVASSIELLHMATLIHDDIIDDSPLRRGTLTVQAHYGKDIAVYTGDLLFTLFFEVLIDV 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A + L GEL Q++L N++ T +DYL + KTA LF A +
Sbjct: 131 MNGSPFMATNAQAMKGLLLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACLEGAHF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ G N+GIAFQ DD+LDY + K + ED G T+P++LA
Sbjct: 191 GKTSPQIEALAGEIGRNIGIAFQAYDDILDYTANEAILQKPVLEDLTQGVYTIPLLLAKT 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
K F ++ K+ ++ + + + A SY +KA ++ LP
Sbjct: 251 ---KNPAAFAPLLEKRANLTEAEAKEVAALVVHYQGVEQAKAFARSYTEKALAGIQELPA 307
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ ++ L + L+R +
Sbjct: 308 GAAREQLERLTKQLLKRNH 326
>gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
Length = 339
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 17/331 (5%)
Query: 6 DLTLKD----------MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
+L +D +E+V + + + S ++ +L+ +GGKR+RP+L L A
Sbjct: 8 ELIAQDPHLGPLMLGSLERVEQRLGESVRSSDQLADVTAHHLLAAGGKRVRPLLALLAAE 67
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ++ + A +E H A+L HDDV+D + +RRG A VWGN ++L GD + +
Sbjct: 68 VAGSVNEDVIEAAVVVELTHLASLYHDDVMDSAPMRRGVETAHTVWGNTVAILTGDMIFA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A ++ QE+L + L G+LR+ + E YL VI KT L +A
Sbjct: 128 RA-SAMVSALGQESLMIQASTFERLVIGQLRETTGPAEGQDPLEHYLEVIAGKTGSLIAA 186
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +L+ G SV + YG +G+AFQL DD++D G + GK G D R G T
Sbjct: 187 SGQYGALLGGAPRSVVDLMVVYGEKVGLAFQLADDIIDLTGHPDVSGKTRGTDLREGVDT 246
Query: 236 LPVILAFQRGTKREKNFWKSTIN-----DGKISVENLKKAFIIMR-ENRALVDTEYRAYS 289
LPV+L + S N DG ++ + + ++ A + A
Sbjct: 247 LPVLLLRRDAAGDNPAAAASAQNILRLIDGDLTDDAALATAVAAVSDHPAAAEAWQIANR 306
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +A ++L LP+S K +L+E + R
Sbjct: 307 WADEAIEALAPLPESVAKAALIEFAHAVVHR 337
>gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
lyrata]
gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ ++ + + + ++V + +Y G GK+ R + L A L R
Sbjct: 86 SLVADELSLLSNKLREMVVAEVPKLASAAEYFFKRGVQGKQFRSTVLLLMATALNLRVPE 145
Query: 64 HVL-----------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
++ +A E IH A+LLHDDV+DD+ RRG + +V GN+ S
Sbjct: 146 ALIGESTDIVSSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMS 205
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ L GE +++ + + + Y+
Sbjct: 206 VLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSTTEQRYSMDYYMQKTY 265
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +++ G V YG NLG+AFQL+DD+LD+ G +GK
Sbjct: 266 YKTASLISNSCKAVAVLTGQTAEVAVLAFEYGKNLGLAFQLIDDILDFTGTSASLGKGSL 325
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E + ++ + N+ A + +++ +
Sbjct: 326 SDIRHGVITAPILFAI-----EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRAREL 380
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ L R
Sbjct: 381 AMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVLTR 420
>gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
Length = 305
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL + KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNVSGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKVQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae]
Length = 376
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 17/322 (5%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHV- 65
++V+F+I + S + ++ V K L SGGKRLRP L L A L +
Sbjct: 60 DRVSFVIDDVVSSFSGRLPLLASVSKLLFESGGKRLRPSLCLLMAGALSPARRDPSAAIG 119
Query: 66 ---LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IH A+LLHDDV+D + RR A + +G++ S+L GDFLLS++ ++
Sbjct: 120 PVDKVAQISEMIHVASLLHDDVLDGATTRRNTPTANVQFGDKASILGGDFLLSRSSIILA 179
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVLFSAALEVS 180
S EA+ ++ + L GE+ Q+ +++ + KTA L + +
Sbjct: 180 SLGSCEAVSLMATIISDLVSGEIMQMRPMNVGSLSDRLEYYLSKSYRKTASLMANSCRTV 239
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I + + ++ A +G LG+ FQL DD+LD G +GK G D G T PV+
Sbjct: 240 AVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLDITGTDKSLGKPSGLDLSTGVATAPVLF 299
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + V ++ A +R + + T S A +L
Sbjct: 300 AAEQYPELNDMM-----GRKFSEVGDVDNALEFIRLSDGIERTRELIRSLAAMACQALDP 354
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
P S ++ SL+ +VD ++R +
Sbjct: 355 FPTSVFRDSLVVLVDNIIKRDS 376
>gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex]
Length = 378
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 2 KMLED--LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
K L + L +D+E V I + + ++ V +Y GK +RP++TL A +
Sbjct: 52 KELREDSLVRQDVEDVYEGIREALTDTQPLLVPVAQYYFGGDGKAIRPVITLCWAKAVNC 111
Query: 60 R---------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ + +E IH A L HDDV+D++ RR + + VWG + S+L G
Sbjct: 112 HLGKQTFRRLIQDQKRVCQVLEMIHAAGLYHDDVIDNAESRRSRPSINNVWGVKKSILAG 171
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
DF+L ++ ++ E +++ L+ + + GE+ QLS + Y+ KTA
Sbjct: 172 DFVLGRSMRIIAEINNEDVSILLNTMIDHIVIGEIMQLSAGATEEERFAHYVDKTFKKTA 231
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + + S++AG + V+ + G LG+AFQLVDD+LD+ ++GK D
Sbjct: 232 SLLAHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILDFSATSAQLGKAAAVDLT 291
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G PV+ A Q+ + +++ AF ++ ++ + T+ A Y
Sbjct: 292 QGLANAPVLFAAQQFPELNPMI-----ARRFKEPGDVETAFQLILQSDGMDKTKELATEY 346
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A + L S +++ L + L R+
Sbjct: 347 CDDAVKQIAQLSSSPYQQFLFTITHKLLNRI 377
>gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
Length = 318
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 157/317 (49%), Gaps = 4/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHV 65
+++ + + + SD ++ +++L S GK +RP++ A + + +
Sbjct: 3 PIADFIKEFEQVFKRSLQSDASVLSHALEHLQHSSGKHVRPIIVGLCAQLCAGQTNERTL 62
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET 124
A IE +HTA+L+HDDV+D S RRG+ ++ N +VL+GD++LS AF +V
Sbjct: 63 AAALVIELLHTASLIHDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLEIVSRE 122
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+QE L ++ L+ GEL QLSLSK EEDY V+ KT LF A+ ++ +L
Sbjct: 123 HNQEMLRVVAQAGRNLSIGELMQLSLSKAHTYREEDYYAVVDRKTGTLFEASAKLGALSV 182
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + G +G AFQL DD+ D ++ ++GK G D GK +LP++
Sbjct: 183 NATDEEVERCARLGQLMGRAFQLQDDLFD-YDKLQDVGKPTGHDLIEGKVSLPLLYVLNH 241
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
T E++ S + I +++ I RE + TE + ++A D LR S
Sbjct: 242 ATPTERDEIISYLQQP-IEADSIDYLLRIARERGGIDYTERQIQQILREAIDLLRSFAPS 300
Query: 305 SWKKSLMEVVDFCLQRL 321
+ +++L + +R
Sbjct: 301 ATRETLERFITLLGERQ 317
>gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18]
gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18]
gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
Length = 324
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 8/317 (2%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ KVN I + + +KY++ GGKR+RP L L + + + + + ACA
Sbjct: 8 LSKVNEYINNLTYDRKPQSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++DD+ LRRG+ + W T++L GD +L AF + + S+
Sbjct: 68 LETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCDSRHLS 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E ++ A + EG+ + DV EE+Y+ +I+ KT+VL + A+++ +++A
Sbjct: 128 EVLRLFTVTALEIGEGQQYDMEFENRNDVKEEEYIEMIRLKTSVLLACAMKIGAILADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D K T +I AF +
Sbjct: 188 AEDVENLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKIGGDIICNKKTYMLINAFNKANA 247
Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDS 304
R+ + I + E + + R Y +A + LPD
Sbjct: 248 RQCKELEKWIGCENFNHEEKVAAVTELYNSIGVDKMAIERINYYFDEANKYIAAVNLPD- 306
Query: 305 SWKKSLMEVVDFCLQRL 321
K L+ L R
Sbjct: 307 ERKAELLAYAQKMLHRK 323
>gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
Length = 305
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNHEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFCLQRLN 322
L R N
Sbjct: 298 QTILTREN 305
>gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 323
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 88/326 (26%), Positives = 152/326 (46%), Gaps = 9/326 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+++ + + + ++R + + + D + Y++ GGKRLRP LT+ +A +
Sbjct: 1 MQLITYYQNEFLAFMKEHFVER---EPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGED 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E H +L+HDD++D+++LRRG+ W T +L GD +L A+
Sbjct: 58 YHKALYAALAVEIFHNFSLVHDDIMDEASLRRGQPTVHTKWNLNTGILSGDTMLILAYQY 117
Query: 121 VIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + S A + EG+ + K + V+ + YL +I KTAVL AAL
Sbjct: 118 FEQYEPNIFQELAKIFSKTAIEVCEGQQYDVDFEKEVQVSTDQYLKMIAYKTAVLIGAAL 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++IA +Q + +G+ LGIA+QL DD LD G+ GK IG D K TL
Sbjct: 178 KMGAIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGD-VSFGKKIGGDILQNKKTLL 236
Query: 238 VILAFQRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A ++GT +K + E + + + ++ + Y KA
Sbjct: 237 YLKALEKGTPVQKQELYTLYTTQPKDEAEKITRVTELFVITQSHTYLREQVEIYTLKAFT 296
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQRL 321
L L + K+ L E + R
Sbjct: 297 ILDALDVPNEKKEILKEFGKNLMNRT 322
>gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
Length = 319
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 72/314 (22%), Positives = 129/314 (41%), Gaps = 9/314 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ +V+ L+ + + + + +GGK LRP L + + + L
Sbjct: 14 LEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLAL 73
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A ++E +HTATL+HDDV+D + RRG +G + +V GD+L ++ E +
Sbjct: 74 AASVEMMHTATLVHDDVIDHADTRRGVATLSAKYGPEIAVYAGDYLFIAVIRLMSEHSLE 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ + G D S A + +
Sbjct: 134 LSNLTKNIGSIERLLGGELGQLNHYFNLQQTLDDYIENISGKTGELFALSASVAPLISKN 193
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
N++ + GMN+GI+FQ++DD LDY +GK + ED + G + PV+ A Q
Sbjct: 194 NALTKRAYKIGMNIGISFQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQENNA 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I E + + ++ + AL T+ A SY A + + LP +
Sbjct: 254 LV---------SELIKNEKFDEVYDFIKTSDALEKTKELAKSYTLSALNLIDKLPKGKNR 304
Query: 308 KSLMEVVDFCLQRL 321
+ + E+ L+R
Sbjct: 305 ELIAEITRKLLERT 318
>gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis]
Length = 348
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGDN 63
V + + + I +V Y SGGK +R LT+ A
Sbjct: 27 VTPALRATVDTFDTRIRPIVAYHFGWMDTSGRPTANSGGKMIRAALTILAAEACGGDAQQ 86
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H +LLHDDV+D RRG+ +G ++L GD LL++A M E
Sbjct: 87 AVPGAAAVELVHNFSLLHDDVMDHDLERRGRPTVWSKFGTPAAILAGDILLARACGMFDE 146
Query: 124 TKSQEALEAL--SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ LA G++ L+L + VT E+ L V + KTA L A + +
Sbjct: 147 ASGHQGWATKALIDAIAELAAGQMADLALERRATVTLEEALTVSEQKTAALLRCACTLGA 206
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G ++ + ++GM+LG+AFQLVDDVL G+ GK + D N K ++PV+ A
Sbjct: 207 GLVGAPDATSRRFGAFGMHLGMAFQLVDDVLGIWGDPAVTGKPVRSDLHNKKKSIPVVAA 266
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + ++ + ++A ++ TE + A L L
Sbjct: 267 LNSGRPGSAELAALYADTDPMTEDGARRAAELVELAGGRAWTESEIERHRGLAVAQLDAL 326
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
+ +++ L+ + D+ R +
Sbjct: 327 GLTEAQRAPLLALADYVAFRKH 348
>gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
Length = 321
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ I K + + + ++Y++ GGKR+RP+LTL + +
Sbjct: 3 PIEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKAL 62
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE H +L+HDD++D+++LRRGK W +L GD +L A+ ++ +
Sbjct: 63 NAATAIEVFHNFSLIHDDIMDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDCP 122
Query: 126 SQEALEALSLVAC---TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S+ E + ++ + EG+ + K +V+ E Y+ +I KT+VL AAL++ S+
Sbjct: 123 SKIFQELVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSI 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I+ + + ++G+NLGIAFQL DD LD G+ + GK IG D K T+ + +
Sbjct: 183 ISETTKENQINMYNFGLNLGIAFQLQDDYLDTFGDAS-FGKKIGGDIIENKKTILYLKSL 241
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++++ ++ + + I + A +Y QKA L +
Sbjct: 242 ALSNEKQREELLRAYTLNEVD-NKIARVREIFQTTNADKAVRQLIENYTQKALMILEKIT 300
Query: 303 DSSWK-KSLMEVVDFCLQRL 321
K + L + R
Sbjct: 301 IGDDKREYLRTFALQLMNRK 320
>gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
49540]
gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
49540]
Length = 325
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 87/317 (27%), Positives = 140/317 (44%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNH 64
+E+VN LI +RI + + +K + GGK LRP L A +
Sbjct: 12 LNNALEEVNHLINQRITVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGGKNSWNSSKL 71
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDDV+DDS RRG + + +G T+V GD L + F +++ET
Sbjct: 72 IKIASSLEILHMATLIHDDVIDDSPERRGAPSIQKAFGKDTAVYSGDLLFTVFFDLLVET 131
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A + A + + +Y I KTA LFS A + +
Sbjct: 132 MESSPYLATNAQAMRKILAGELGQMNQRYQQQSLLEYYRNINGKTATLFSLAAQEGAHFG 191
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G K G N+GI FQ++DD+LDY ++ K I ED G +LP++L
Sbjct: 192 GADARTVHLAKHIGQNIGITFQILDDMLDYTTN-KKLNKPILEDLATGVYSLPLLLV--- 247
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ K +++VE+ ++ ++ + + A + KA + LP S
Sbjct: 248 LKEHHKELDPYLAKKQEMTVEDTQEVQRLVNQYGGVKQAHELAGKFTNKALQLIDELPTS 307
Query: 305 SWKKSLMEVVDFCLQRL 321
+K L +V L R
Sbjct: 308 PTQKLLKKVTIQLLDRS 324
>gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 334
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 26/337 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM------IPDVVKYLIFSGGKRLRPMLTLATALM 56
L + D+ + L+ + + SD ++ + V+ LI +GGKRLRP++ + +
Sbjct: 2 NLHNRIGVDLASFDRLLREVVSSDRDLPPSSVVLSSVM-DLINAGGKRLRPLMVVLGSRF 60
Query: 57 L-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A +E++H A+L+HDD++D S +RRG QT+V +G+++++
Sbjct: 61 GESGHEPAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIA 120
Query: 116 QAFCMVIETKSQEALEALSLVACT--------------LAEGELRQLSLSKNLDVTEEDY 161
+A + V+ L GE QL + +T E Y
Sbjct: 121 RAIEWAAGHPGGDPDGNSEDVSEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQY 180
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + KTA+L + L+ + A + L +G +LG+AFQ+ DD+LD+ +
Sbjct: 181 LEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFTKPREAI 240
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G D +NG TLPV+ + + ++ + A+
Sbjct: 241 GKPAGADLQNGNITLPVLY----ALNDPALAPRIRQLGPHSAAADMDDVIHRIAATGAIE 296
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+E A SY + A+ + D ++ L ++ + L
Sbjct: 297 QSEELARSYAEHAQRMIGDFADHPAQRDLQALLHYFL 333
>gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
44728]
gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
44728]
Length = 322
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 4/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
LE + +E + + + I S + + +++ +GGKR RPML++ A +
Sbjct: 7 ELEASVSRRLEVIEKRLQEVIDSGDAFLTEAASHVLKAGGKRFRPMLSVTAAHFGDPDAH 66
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + +E H ATL HDDV+D++A+RRG +A W N ++L GD+L + A +V
Sbjct: 67 GVIESSLVMELTHLATLYHDDVMDEAAMRRGAPSANSRWSNSIAILSGDYLFAVASELVA 126
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E S+ E + L G++ + + YL V+ KT L + A + +
Sbjct: 127 ELGSETVREQARTFSR-LVHGQIAETVGPPEGVDPVDWYLRVLTDKTGSLIATAARLGAQ 185
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG SV A+ YG +G+AFQL DD+LD + + GK G D G PTLPV+ A
Sbjct: 186 FAGAPTSVVDAVAEYGETIGVAFQLSDDLLDIASDGDTSGKVQGLDLMEGIPTLPVLYAQ 245
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + ++ E+L++ ++R + A+ +G++AK LP
Sbjct: 246 ---VGDDTSPRLRELVSKPVAQEDLEETLELLRSSAAMKQARKTLDEFGERAKAVAGSLP 302
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S + +L + D+ + R +
Sbjct: 303 AGSTRDALTGMCDYMVARSS 322
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 131/332 (39%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + V + I I D ++Y + +GGKRLRP+L LAT ++
Sbjct: 16 DLKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTV 75
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK V+G ++L GD LL+ AF
Sbjct: 76 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V+E E L + L ++ L D+ E + KT
Sbjct: 136 YVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTG 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ +L+ G S L Y N+G+AFQ+VDD+LD + +GK +G+D
Sbjct: 196 ALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVA 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L + A
Sbjct: 256 AQKMTYPRLW--------------------------------------GLEKSRQEAERL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK L + L + D+ R +
Sbjct: 278 VAEAKAELAVY--GAAAVPLQAIADYITSRSH 307
>gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
gamma proteobacterium EB000-45B06]
gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium
562]
Length = 316
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 168/317 (52%), Gaps = 5/317 (1%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
++L KD+++VN L+ K I + + I ++ Y+ GK+LR L+L + +G
Sbjct: 4 KNLINKDLKEVNNLLRKNIIKE-KTISNLYAYIFKKNGKQLRARLSLIASSADRRQGKKR 62
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ LA IE +H ATL+HDDVVD+S RRG + +W N VL+GD++ S+AF +++E
Sbjct: 63 LKLAAIIELLHNATLVHDDVVDESPTRRGVKSVNNIWTNAHGVLIGDYIYSKAFMLMVEL 122
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + LE LS +++GEL QL N ++ + + KT LF A+ + +L+
Sbjct: 123 GNSKILEELSNATNDISKGELIQLDAIANTGISLSELEDISYFKTGRLFEASAKCGALLC 182
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ S ++ NLGI FQ+ DD+LDY G+ + +GK +D + GK T P A+Q
Sbjct: 183 NSKKSYVNSISECAKNLGIVFQIKDDLLDYLGKEDALGKPAFQDIKEGKVTYPFYFAYQN 242
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+K + + + K+S + ++ + DTE A Y K K L D+
Sbjct: 243 ANSDDKKILSTMLGNKKVSHSKVS---NLIERLGGINDTENLAIKYINKCKVLAGKL-DN 298
Query: 305 SWKKSLMEVVDFCLQRL 321
++ +++++D + R+
Sbjct: 299 DLQQEMLKLLDSSINRI 315
>gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
Length = 302
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 147/303 (48%), Gaps = 15/303 (4%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---------HVLLACAIEFIHTAT 78
+ +V YL GK++RPML TA Y D + E IHTA+
Sbjct: 3 PQLREVSNYLFDERGKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHTAS 62
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
L+HDDV+D + +RRGK VWG + ++L GD++LS+A + + +++ + LS V
Sbjct: 63 LIHDDVIDAAHIRRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNERVVIVLSQVLD 122
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQALKSY 197
L +GE QL ++ Y+ KTA L + + + ++ + + ++
Sbjct: 123 DLVQGEFMQLGSKEDRGERFNHYIKKTFRKTASLMACSCKAVAILADPLNQFLHDVAFNF 182
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
GM+ GI+FQL+DD+LD+ + MGK D R G T PV+ A R + + +
Sbjct: 183 GMHFGISFQLIDDLLDFIASDDVMGKPTSTDLRLGLATAPVLYACDRFPELDAMIMRRFT 242
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
G ++++A I+ ++ + T+ A + +A + L +S + +L+++ D
Sbjct: 243 QSG-----DVQRAREIVDQSDGMDQTKRLACFHRDEAIRFISQLGESMERNALIQLSDDV 297
Query: 318 LQR 320
+ R
Sbjct: 298 VTR 300
>gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus
Af293]
gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
fumigatus Af293]
gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
fumigatus A1163]
Length = 450
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 93/372 (25%), Positives = 147/372 (39%), Gaps = 63/372 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----------- 55
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 82 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRP 141
Query: 56 --------------------------------------MLEYRG--DNHVLLACAIEFIH 75
+ + LA E IH
Sbjct: 142 NDVAPISVNDPISSPSILADTNPDTNSLVSESAEAQYDFVGDENILPSQRRLAEITELIH 201
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E L+
Sbjct: 202 TASLLHDDVIDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLAT 261
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-------N 188
V L EGE QL + + I + + S
Sbjct: 262 VIANLVEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSAP 321
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V +A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ A+++ +
Sbjct: 322 EVVEAAYSYGRNLGLAFQLVDDLLDYTVSGVELGKPAGADLELGLATAPLLFAWKQNPEL 381
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ ++++A I+ + + T A Y KA ++ PDS K
Sbjct: 382 GP-----LVGRKFSQEGDVQRAREIVYNSDGIEQTRALAQEYADKAVAAIADFPDSEAKS 436
Query: 309 SLMEVVDFCLQR 320
L+++ + + R
Sbjct: 437 GLIQMCEKTMNR 448
>gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 345
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E+V + + + + +V+ + GK LRP L L + +L D V +A A+E
Sbjct: 8 ERVQKRLKEVLSGGQAQLEEVLMGPLQGLGKMLRPRLVLLSRGLLGPIEDLTVDVAVAVE 67
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IH A+L+HDD++D + LRRG ++G + +VLVGD + AF ++ + +
Sbjct: 68 CIHNASLIHDDIIDAAVLRRGAPTINHLYGPKIAVLVGDHYFAAAFGLLTRHNLKHIMRE 127
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
LS + +GE+ Q N +TE+DY I KTA LFSAA + G
Sbjct: 128 LSDAIQDMCKGEIYQDLNLFNPYITEDDYWTSIFGKTASLFSAACRCGVMAGGGSAREVY 187
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ +G LG A+Q+ DD+ D G+ +MGK G D NG TLPVI A + +RE
Sbjct: 188 LMGKFGRELGYAYQVADDINDLIGDEEKMGKPAGTDLVNGVITLPVIRALKISPERELIS 247
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ +I +LKK ++ E A + + +KAK+ L D + L+E
Sbjct: 248 FLIL--SRRIYGSDLKKVIALIEECGAFEYAACKVKAKVEKAKEVLAAFRDCPARDELIE 305
Query: 313 VVDFCLQ 319
+ D +
Sbjct: 306 MADSIIS 312
>gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
Length = 322
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + +E++ + + +++ I +GGK LR L L A + D+ +
Sbjct: 11 MVYQQLEQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLIT 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETK 125
AIE +H ATL+HDDV+D + LRRG GN+ ++ GDFL + F + +
Sbjct: 71 AGAAIEALHLATLVHDDVLDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNP 130
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L + V + GE+ Q S L + +YL I KTA LF+ A + I
Sbjct: 131 ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIGQ 190
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + ++A +G LG+AFQ++DD+LDY + K + ED NG TLP+I A+Q
Sbjct: 191 LDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNV 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ + S + I+ E+ L A Y KA ++L LPD+
Sbjct: 251 PEQLAPMVGTAAKIAANSD----RIAAIVSEHG-LPQARQLATRYTDKAINALAPLPDAR 305
Query: 306 WKKSLMEVVDFCLQRLN 322
K+ L ++ LQR +
Sbjct: 306 IKQELRKLTQQLLQRDH 322
>gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]
Length = 420
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ + + + ++V + +Y G GKR RP + L A ++
Sbjct: 84 SLVADELSILANRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATAIDAPISR 143
Query: 64 -----------------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A + IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 144 TPPDTSLDTLSTELRLRQQTIAEITKMIHVASLLHDDVLDDAETRRGIGSLNFVMGNKLA 203
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ + + + E Y+
Sbjct: 204 VLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTTTSDQRCSMEYYMQKTY 263
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
TA L S + + +L+AG + V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 264 YMTASLISNSCKAIALLAGQTSEVAMLAYEYGKNLGLAFQLIDDVLDFTGTSASLGKGSL 323
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A + + +++G + N+ A + ++R + T
Sbjct: 324 SDIRHGIVTAPILFAIEEFPELRA-----VVDEGFENPYNVDLALHYLGKSRGIQRTREL 378
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A D++ LP + +++L+E+ + R
Sbjct: 379 AIKHANLASDAIDSLPVTDDEHVLRSRRALVELTQRVITR 418
>gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
Length = 328
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
+ L +++ + + D ++ +++L S GK +RP++ A +
Sbjct: 8 EQLLVPIADFIKEFEQDFRQSLQCDAPVLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQT 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-C 119
+ + A IE +HTA+L+HDDV+D S RRG+ ++ N +VL+GD++LS AF
Sbjct: 68 NEQTLSAALVIELLHTASLIHDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLE 127
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + E L ++ L+ GEL QLSLSK EEDY V+ KT LF A+ ++
Sbjct: 128 LVSREHTPEMLRVVAQAGRDLSIGELMQLSLSKAHTYREEDYYAVVDRKTGALFEASAKL 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L + G +G AFQL DD+ D + ++GK G D GK +LP++
Sbjct: 188 GALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFD-YDKALDVGKPTGHDLIEGKVSLPLL 246
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
T E++ S + S ++ I E + TE + Q+A + LR
Sbjct: 247 YVLNHATPTERDEIISYLQQPIGSDS-IEYLLRIAHERGGIDYTERQIQHIHQEAINLLR 305
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
SS +++L + +R
Sbjct: 306 SFTPSSTRETLERFITLLGERQ 327
>gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis]
Length = 321
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 30/324 (9%)
Query: 22 RICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD----------------- 62
+ ++V + +Y G GKR RP + L A L R
Sbjct: 1 MVIAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRT 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A +
Sbjct: 61 RQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K+ E + L+ V L GE Q++ S + + + Y+ KTA L S + + +L
Sbjct: 121 SLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG V YG NLG+A+QL+DDVLD+ G +GK D R+G T P++ A
Sbjct: 181 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
E ++ + G N+ A + ++R + T A + A ++ LP
Sbjct: 241 -----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLP 295
Query: 303 DS------SWKKSLMEVVDFCLQR 320
++ +++L+++ + R
Sbjct: 296 ENNDEDVTKSRRALLDLTHRVITR 319
>gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 312
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + +E++ + + +++ I +GGK LR L L A + D+ +
Sbjct: 1 MVYQQLEQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLIT 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETK 125
AIE +H ATL+HDDV+D + LRRG GN+ ++ GDFL + F + +
Sbjct: 61 AGAAIEALHLATLVHDDVLDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNP 120
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L + V + GE+ Q S L + +YL I KTA LF+ A + I
Sbjct: 121 ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIGQ 180
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + ++A +G LG+AFQ++DD+LDY + K + ED NG TLP+I A+Q
Sbjct: 181 LDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNV 240
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ + S + I+ E+ L A Y KA ++L LPD+
Sbjct: 241 PEQLAPLVGTAAKIAANSD----RIAAIVSEHG-LPQARQLATRYTDKAINALAPLPDAR 295
Query: 306 WKKSLMEVVDFCLQRLN 322
K+ L ++ L+R +
Sbjct: 296 IKQELRKLTQQLLRRDH 312
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 136/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + V + + + + E I + ++Y + +GGKRLRP+L L T ++
Sbjct: 18 ELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTV 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LLS AF
Sbjct: 78 EMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V L V L ++ L DVT + + KT
Sbjct: 138 YVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + + L Y N+G+AFQ++DDVLD E+GK G+D R
Sbjct: 198 ALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDER 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L +++ +A +
Sbjct: 258 AQKATYPSLW--------------------------------------GLEESQKQAQAL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L P + L + F + R N
Sbjct: 280 IDDAIAQLS--PYGQAAQPLEAIAQFIVARKN 309
>gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
Length = 324
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 11/325 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++L ++ + + + + + + Y++ GGKR+RP+LTL + +
Sbjct: 4 ISHYQELISDYFSEL------HLTKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A AIE H +L+HDD++DD+ LRRG W T +L GD +L A+
Sbjct: 58 CKKSLAAATAIEIFHNFSLVHDDIMDDAPLRRGNETVHEKWNINTGILSGDAMLILAYQH 117
Query: 121 VIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
E + + + L + T + EG+ + DV +YL +I+ KTAVL AA+
Sbjct: 118 FEEYEPKIFRDLAKLFSKTALEVCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVGAAM 177
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ +++A + +G+NLGIAFQL DD LD G GK +G D K T
Sbjct: 178 KMGAIVAQTSTENANLIYDFGLNLGIAFQLQDDYLDAFGNPETFGKQVGGDIIENKKTYL 237
Query: 238 VILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A + +EK + S + + I + +A T+ Y KA +
Sbjct: 238 YLKAIEFSQPQEKEQLLHLFSIQPNDSSDKIISVKEIFNKTKASEATQKAIQDYTFKAFE 297
Query: 297 SLRCLPDSSWKK-SLMEVVDFCLQR 320
+L + S+ KK L + + R
Sbjct: 298 TLEKMNISNNKKTILRTFGENLMSR 322
>gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10]
Length = 326
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 159/316 (50%), Gaps = 3/316 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ +V+ LI I + + + + + +G K LRP L L A ++ +
Sbjct: 12 LIAGELAEVDTLIQHTIQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQTIN 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +H ATL+HDD +DDS LRRG ++ + +G +V GD L + F ++++T +
Sbjct: 72 LASSIEILHMATLIHDDTIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLMLDTTT 131
Query: 127 QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + GEL Q++ NL+ T DYL+ IK KTA LF A E + AG
Sbjct: 132 EHEYLVRNAQTMSHILNGELGQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAG 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
AL ++G NLGIAFQ+VDD+LDY G + K ED G +LP++LA +
Sbjct: 192 GNAEQSTALANFGENLGIAFQIVDDLLDYTGSAK-LNKPTLEDLATGVYSLPLLLALDQ- 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + ++SV +++ I+ + + + A Y QKA D L ++S
Sbjct: 250 PELKTKLLPILNKKRQMSVSDMQLIQEILVNSAVIEKSRKLAQEYAQKAVDCLDIFQNNS 309
Query: 306 WKKSLMEVVDFCLQRL 321
L ++ L+R
Sbjct: 310 AATLLKKMPQQLLKRS 325
>gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
Length = 323
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + D+E V + + E +++ L +GGKRLR L L A
Sbjct: 8 EIMERIALDLEHVEESLASSFNTVAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF +V
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKIVS 127
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ L
Sbjct: 128 EMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELGGL 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T P++
Sbjct: 188 LGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLTYPLLSIV 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
G K + +N+G + + + +T A Y + A +L +
Sbjct: 248 NDGNKDKLLEDIKGLNNGGNEQD----IIDYVIAQGGIDNTLAVADKYCKDALAALAAVR 303
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D S K+ L+ V+ R
Sbjct: 304 DFSGKEFLVMAVENLADRK 322
>gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366]
gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366]
Length = 322
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 160/325 (49%), Gaps = 13/325 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+++ ++ +N + E + ++Y++ GGKR+RP+LTL A + E
Sbjct: 6 QLQEVIENAIQNIN------YPAQPEKLYAPIRYIMSMGGKRIRPVLTLMAADLFEADIL 59
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A AIE H TL+HDD++D++ LRRGK WG ++L GD ++ +A +
Sbjct: 60 KAIPAALAIETFHNFTLVHDDIMDNAPLRRGKQTVHEKWGINNAILSGDVMMVEANKQLS 119
Query: 123 ETKSQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
S + + A + EG+ + + V+ +Y+++I+ KTAVL A+++
Sbjct: 120 MLHSAILKDALETFNATARGVCEGQQLDMEFEQQAIVSIPEYINMIRLKTAVLLGGAMKL 179
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +AG ++ + L +G+NLGIAFQL DD+LD G+ + GK +G D K TL ++
Sbjct: 180 GAQVAGADHNEAEQLYQFGLNLGIAFQLQDDILDVYGDPEKFGKQVGGDIIANKKTLLLL 239
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + ++ + + E +K + +Y KA D+L
Sbjct: 240 KLKELASAEDLRKLEAQSTNKDHT-EKVKHITGLYNAYNIPELAGIEMRNYADKAFDALN 298
Query: 300 --CLPDSSWKKSLMEVVDFCLQRLN 322
+P+S K L+E+ D + R +
Sbjct: 299 AVKVPESR-KSELLELADLLMSREH 322
>gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST]
gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST]
Length = 346
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 15/325 (4%)
Query: 7 LTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
L +++ + I + I ++ + + + Y GK RPM+ + A L Y N
Sbjct: 26 LLEDELKYIFEDIRQEISRATNHQELNKIAVYYFDGQGKAFRPMVAILMAKALNYHMHNE 85
Query: 64 -------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E IHTA+L+HDDV+D S RRGK + ++W ++ GD++L+
Sbjct: 86 NSDVMNAQRQIAMISEMIHTASLVHDDVIDQSFARRGKPSVNVLWNHKKVTQAGDYILAV 145
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A ++ K E LS V L +GE QL + + Y KTA L + +
Sbjct: 146 ASMLLARLKHDEVTHILSQVLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANS 205
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ ++++G + + YG NLG+AFQ VDD+LD+ MGK D + G T
Sbjct: 206 LKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATA 265
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A ++ + ++++A+ ++ +++ L T + A + +A
Sbjct: 266 PVLFACEKFPELNPMIL-----RRFREPGDVERAYELVHQSQGLEQTRFLARKHCIEALR 320
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +S ++K L+ V DF L R+
Sbjct: 321 LASQISESPYQKGLIVVGDFVLNRM 345
>gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis Il1403]
gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis Il1403]
gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis CV56]
Length = 319
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 9/314 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ +V L+ + + + + +GGK LRP L + + + L
Sbjct: 14 LEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLAL 73
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A ++E +HTATL+HDDV+D + RRG +G + +V GD+L F ++ E +
Sbjct: 74 AASVEMMHTATLVHDDVIDHADTRRGVATLSAKYGPEIAVYAGDYLFIAVFRLMSEHSLE 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ + G D S A + +
Sbjct: 134 LSNLTKNIGSIERLLGGELGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKN 193
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
N++ + GMN+GI+FQ++DD LDY +GK + ED + G + PV+ A Q
Sbjct: 194 NTLTKRAYKIGMNIGISFQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQENNA 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I E + + ++ + AL T+ A SY A + + LP +
Sbjct: 254 LV---------SELIKNEKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGKNR 304
Query: 308 KSLMEVVDFCLQRL 321
+ + E+ L+R
Sbjct: 305 ELIAEITRKLLERT 318
>gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis]
Length = 348
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 14/322 (4%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGDN 63
V + + + I +V Y SGGK +R LT+ A
Sbjct: 27 VTPALRATVDTFDNRIRPIVAYHFGWMDTSGRPTANSGGKMIRAALTILAAEACGGDARQ 86
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H +LLHDDV+D RRG+ +G ++L GD LL++A M E
Sbjct: 87 AVPGAAAVELVHNFSLLHDDVMDRDLERRGRPTVWSKFGTPAAILAGDILLARACGMFDE 146
Query: 124 TKSQEALEAL--SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ LA G++ L+L + VT E+ L V + KTA L A + +
Sbjct: 147 ASGHQGWATKALIDAIAELAAGQMADLALERRATVTLEEALTVSEQKTAALLRCACTLGA 206
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ G + + ++GM+LG+AFQLVDDVL G+ GK + D N K ++PV+ A
Sbjct: 207 GLVGAPDGTSRRFGAFGMHLGMAFQLVDDVLGIWGDPAVTGKPVRSDLHNKKKSIPVVAA 266
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + ++ + ++A ++ TE + A L L
Sbjct: 267 LHSGRPGSAELAALYADTDPMTEDGARRAAELVELAGGRAWTESEIERHRGLAVAQLDAL 326
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
+ +++ L+ + D+ R +
Sbjct: 327 GLTEAQRAPLLALADYVAFRKH 348
>gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361]
gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361]
Length = 325
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + VKY++ GGKR+RP L L + + ++ ++ A
Sbjct: 9 LQKINSFIEQLPYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDDPESILMQAVG 68
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ LRRG W +VL GD +L A+ +++ +
Sbjct: 69 LETYHNYTLLHDDLMDNADLRRGHETVHKKWNANQAVLSGDSMLVLAYQRMMDCPVDKLE 128
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + A + EG+ + DV+E++Y+ +I+ KT+VL + AL++ +++AG
Sbjct: 129 KVLGLFTETALEIGEGQQYDIDFEMRNDVSEDEYIEMIRLKTSVLLACALKIGAILAGAS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
S L +G +G+AFQL DD LD G+ GK IG D + K T +I AF R +
Sbjct: 189 PSDADKLYKFGEKMGLAFQLQDDYLDVYGDEKVFGKAIGGDITSNKKTYMLINAFNRANE 248
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DSS 305
+K + + + KA + + + + Y +++K L +
Sbjct: 249 EQKAELRKWVTAETFDRDEKVKAMTRLYDEIGIDKLAHQKILHYFEESKQYLDEVDVPEE 308
Query: 306 WKKSLMEVVDFCLQRLN 322
K+ L + + R +
Sbjct: 309 RKRELRAYAEAMIDRKS 325
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 139/332 (41%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + VN + + I D +I + ++Y + +GGKR+RPML LA ++
Sbjct: 74 NFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELVGGDQ 133
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
N + ACA+E IHT +L+HDD +D+ +RRGK V+G +VL GD LL+ AF
Sbjct: 134 SNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFE 193
Query: 120 MVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + S+ L G++ ++ + N +V + + KTA
Sbjct: 194 FIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTA 253
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 254 ALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLV 313
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 314 VDKTTYPKLL--------------------------------------GLEKAKEFAAEL 335
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ AK L L+ + D+ R N
Sbjct: 336 NRDAKQQLADFDPHKA-APLVALADYIANRQN 366
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + VN + I + I + ++Y + +GGKR+RPML +A ++
Sbjct: 79 DFKSYMLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAGGKRIRPMLCIAACELVGGDE 138
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E +HT +L+HDD +D+ LRRGK V+ +VL GD +L+ +F
Sbjct: 139 STAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFE 198
Query: 120 MVIETKSQEALEALSLVACTLAEGELR---------QLSLSKNLDVTEEDYLHVIKSKTA 170
V E + V LA+ + +V E + +KTA
Sbjct: 199 HVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTA 258
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G + + L+++ +G+ FQ+VDD+LD E+GK G+D
Sbjct: 259 ALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 318
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + ++ A
Sbjct: 319 ADKTTYPKLI--------------------------------------GIEKSKEFAERL 340
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK+ L + L+ + D+ R N
Sbjct: 341 NREAKEHLAGFDQNKA-APLIALADYIAYRDN 371
>gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922]
gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922]
Length = 323
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 92/326 (28%), Positives = 161/326 (49%), Gaps = 9/326 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +E+L + ++ I K + + + ++Y++ GGKR+RP++ L M
Sbjct: 1 MHSIEELH----QIIDQAIEKNLDIKSPRELYEPIEYILGIGGKRIRPLIVLMGNQMFNG 56
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ V A A+E+ H TL+HDD++D + LRRGK A + +G +++L GD +L +A+
Sbjct: 57 LIEDAVKPAIAMEYFHNFTLMHDDIMDSAPLRRGKEAVHIKYGINSAILSGDTMLIRAYE 116
Query: 120 MVIETKSQEALEALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ + + EA+ L T EG+ ++ +++ EDY +IK KTAVL A
Sbjct: 117 LLEDLPNDVFKEAIRLFNKTAIELCEGQQYDVNYETQKEISFEDYYKMIKGKTAVLVGAC 176
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ +LIAG L G+NLGIA+QL DD LD G ++GK D K T+
Sbjct: 177 LKLGALIAGAPKEEADRLYEIGLNLGIAYQLKDDYLDVFGTSVKIGKKHAGDIYENKKTI 236
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ A Q +E++ N +++ + + R+ + Y +KAK
Sbjct: 237 LFVTALQNADAKERDELLYWYNIKAENIDKVYAVEKLYRKLKVNKQIAQLIKDYTKKAKQ 296
Query: 297 SLRCLPDSSWKK-SLMEVVDFCLQRL 321
+ + + KK L E+ + + R
Sbjct: 297 LIDEVAVAEEKKYYLRELSEMLIDRQ 322
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V+ + + + E I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 16 DLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCDLMGGTV 75
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LLS AF
Sbjct: 76 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V E + V L ++ L D+T E + KT
Sbjct: 136 YVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETLTFIHTHKTG 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + L Y N+G+AFQ+VDD+LD E+GK+IG+D +
Sbjct: 196 ALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEELGKSIGKDVQ 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + +++ +A
Sbjct: 256 AQKATYPSLW--------------------------------------GIEESKVQAQKL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L P S + L + F + R +
Sbjct: 278 VDEAIAQLA--PYSEKAEPLRAIAQFIVTRTH 307
>gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 359
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 30/339 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-------- 56
L +++ V I + ++ E++ KY + +GGK +RP L A
Sbjct: 29 ALVHREITAVREHIQSLVANTNNEVLDHAGKYALAAGGKLMRPALVALMAHAMLPLDVSA 88
Query: 57 ---------LEYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
L+ + LA E IHTA+L+HDDV+D S +RRG+ A V+
Sbjct: 89 RLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDSSDMRRGRPALHKVYDT 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GD++L++A + + + ++ L GEL Q+ ++ E+
Sbjct: 149 KRAVLAGDYILARASFYIATLQVPRIVILMTTALEELMSGELLQMDGCFDIPRYEQKSF- 207
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+++ ++ + L+ ++ Q +G +LGIAFQ++DD LD G+ MGK
Sbjct: 208 --CKTASLISNSLASTAVLVDPGNEALEQTAFDFGRHLGIAFQILDDCLDITGDEKTMGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G T+PV+L QR K +K + +++ M + A+ +
Sbjct: 266 PKLADMKEGIATIPVLLVAQRNAKVDKMV-----RRRFSELGDVEYCLEAMEKEGAVAEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
RA + + +SL L S + +L + + R +
Sbjct: 321 IQRADEHCRLGIESLHKLHHSPARDALANALLMVINRKS 359
>gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
14796]
gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
14796]
Length = 314
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 164/321 (51%), Gaps = 16/321 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L+ + ++ + + + ++VE + + +L+ +GGKR+RP L +AL + +
Sbjct: 9 ELKSHIK--LSEIE--LARILETEVETLRNASLHLLEAGGKRIRPTLVFLSALCVNQDIE 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A +E IH ATL+HDDV+D+S +RRG ++ +G + ++L GDF+L++ +
Sbjct: 65 KVIKYAAVVEGIHLATLIHDDVIDESNVRRGILSVNGKYGFKVAILSGDFILAKITHFLS 124
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+++E + ++ V +AEGE+ Q + I T + L
Sbjct: 125 LLENKEPVRLMAEVIMRMAEGEVMQQEDLFKI----VSIERYIIRCTNKTARLISSSAFL 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ R +G+NLGIAFQ++DD+LD+ GEV ++GK G D R+G TLPV+L
Sbjct: 181 GSIDVLDKRNIFAEFGLNLGIAFQIIDDILDFTGEVKKLGKVPGSDLRSGVVTLPVLLLS 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + EK K + + K +++ + L ++ A Y KA + L+ L
Sbjct: 241 KKSREVEKLLEKKF-------EDGINKIIEMVKNDNVLKESVDLAKYYSNKAIECLKELK 293
Query: 303 -DSSWKKSLMEVVDFCLQRLN 322
++ + K+LM+ V +R++
Sbjct: 294 INNIYAKTLMDYVKMLEERVS 314
>gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 324
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ +N + + + + + ++Y++ GGKR+RP+L + + + + ++ ACA
Sbjct: 8 LKLINEQLERLSDNREPRHLYEPIEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + LRRG W T++L GD +L A+ + ++
Sbjct: 68 IETYHNYTLLHDDLMDCADLRRGCATVHKRWDANTAILSGDSMLVLAYQRMATCRADYLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L T + EG+ + K DVTE++Y+ +I+ KT+VL + AL++ +++ G
Sbjct: 128 EVIDLFTQTALEIGEGQQYDMDFEKRDDVTEDEYIEMIRLKTSVLLACALKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I AF T
Sbjct: 188 QEDAENLYRFGEKIGLAFQLQDDYLDVYGDTKVFGKAIGGDIISNKKTYMLINAFNLATP 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + + +A + + + + Y +++K L + +
Sbjct: 248 KQRAELTEWTQKEQFDKQEKIEAVTALYNAMGIEQLAKDKIAYYFEESKKYLEAVKLPAE 307
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L+ + + R+
Sbjct: 308 RKQELLSYANQLMNRV 323
>gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 342
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 10/319 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME + + +R + E + + +Y + GK LRP+L + +A + G V A ++
Sbjct: 22 MELLLRELDRRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSV 81
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------- 121
E++H +L+HDDV+D A RRG+ + +G +++ GD L+ F ++
Sbjct: 82 EYLHVGSLVHDDVIDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGGL 141
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ A+ + L G+ + L +L + YL + KT LF AA +
Sbjct: 142 PPGRVLGAVRVFARAGVDLCRGQSMEGELRGDLGCGLDRYLTMSSLKTGALFRAACRGGA 201
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + + AL +Y +LG+AFQ+ DD+L Y + GK+ D +PT PV+L
Sbjct: 202 ILGGGSPAQQHALTAYAEHLGLAFQMHDDLLPYTSDPRTTGKSALSDIAAARPTFPVLLC 261
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ + + + L+ ++ AL +A + +A L L
Sbjct: 262 HAMAGAPGRARLEAALGGALPAADALRTVHELLETTGALDAARDQATAQADRATSCLAEL 321
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S L V D + R
Sbjct: 322 PRSRATAVLAAVADLSVSR 340
>gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 330
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K+ +L + V I ++ + + V Y + S GKRLRP L L
Sbjct: 7 LKVPFELINAQLYSVEERIRQQARAFDPAVEGYVAYAVESHGKRLRPALALLAGGATGNI 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+H+ LA +E IH ATL+HDD++D + RRG+ A WGN SVL+GD L + A +
Sbjct: 67 CPSHLDLAVILELIHAATLVHDDILDGADKRRGQPTANAKWGNAISVLLGDCLFAHALKL 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ E ++ A + GE+ Q +L ++ DY +I+ KTA LF+AA E+
Sbjct: 127 STSFPNGEISRRIAHAASEVCSGEIIQTQRRFDLKLSVPDYYKIIEMKTAALFAAACELG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+LI V AL+ +G+ LG A+Q+ DDVLD G+ + GK +G D R GK TLP++
Sbjct: 187 ALINEAAPEVIDALRIFGLQLGTAYQIYDDVLDLAGDEAKAGKTLGSDLRKGKLTLPILH 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q + E++ I +G ++ A+ ++A+ L+
Sbjct: 247 LLQISDEAERHRLSEIILNG--DEADILALAEKAIAAGAVKSAIATGRKMLREAEGRLQI 304
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+P++ ++ +L +V L R+
Sbjct: 305 VPENKYRDALGGLVT-TLDRM 324
>gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 436
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 27/335 (8%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-SGGKRLRPMLTLATALMLE------- 58
L +DM VN I + + SD ++ V +Y GGK++RP + L + E
Sbjct: 108 LVEQDMVSVNHSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRATD 167
Query: 59 ----------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
Y LA E IHTA+L+HDDV+D++ RRG+ + V+G + +VL
Sbjct: 168 TPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVL 227
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIK 166
GDFLL+++ ++ ++ EA+E +S L +GE+ Q+ + +++ E YL
Sbjct: 228 AGDFLLARSSVLLARLRNLEAVELMSTSIEHLVKGEVMQMKNADARDDISPFEYYLRKNY 287
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L S + + + + + ++G ++G+AFQL+DDVLDY G GK
Sbjct: 288 YKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVET--GKPFL 345
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D ++G T P++LA E + +++ A ++ ++ + ++
Sbjct: 346 ADLKSGLSTAPLLLAQ-----EEFPVLRELSKRKFAQEGDIEMASELVEKSSGITRSKAL 400
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A + A + S + +++ + + R
Sbjct: 401 AIGQAELAAQAAMQFAPSPERDAMVRLAQKVVYRS 435
>gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
roseum DSM 5159]
gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
roseum DSM 5159]
Length = 334
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 173/312 (55%), Gaps = 2/312 (0%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
D+++V +L+ + +I D+++ LI +GGKRLRP+L L A Y D V A
Sbjct: 21 DLQRVEDRLLEETALEFPLIGDILRTLILAGGKRLRPLLLLLAAKPFRYDLDRLVPAAAG 80
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE +HTA+L+HDD +D +++RRG+ ++ ++VGD++ +++ + T + L
Sbjct: 81 IELLHTASLIHDDSLDGASVRRGQPTLNALFDPSVVIMVGDYMFARSAMLAASTMNPRVL 140
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ ++ +G+LR+L ++ DV+ +DY H I KTA LF+ + E+ +++A +
Sbjct: 141 AVFAHCLGSICDGQLRELFAARRTDVSLDDYQHRIYGKTASLFAGSAEIGAILAEAPDDQ 200
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKR 248
+ L+ +G +G+AFQ+VDDVLD+R NE+GK G+D R G TLP+ + T
Sbjct: 201 IELLRDFGGAMGMAFQIVDDVLDFRATENEIGKPAGQDLRQGTVTLPILLFFQNGKATSE 260
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E+ F + I +G + L +A ++R + AL + A Y + AK L LP + +
Sbjct: 261 ERAFVEQVIAEGAPDDDALARALQLIRTSGALEEALDYARRYVEDAKALLAGLPPTEGRD 320
Query: 309 SLMEVVDFCLQR 320
L V D L R
Sbjct: 321 MLAAVADHALAR 332
>gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W]
gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II]
Length = 322
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + +E++ + + +++ I +GGK LR L L A + D+ +
Sbjct: 11 MVYQQLEQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLIT 70
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETK 125
AIE +H ATL+HDDV+D + LRRG GN+ ++ GDFL + F + +
Sbjct: 71 AGAAIEALHLATLVHDDVLDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNP 130
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L + V + GE+ Q S L + +YL I KTA LF+ A + I
Sbjct: 131 ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIGQ 190
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + ++A +G LG+AFQ++DD+LDY + K + ED NG TLP+I A+Q
Sbjct: 191 LDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNV 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ + S + I+ E+ L A Y KA ++L LPD+
Sbjct: 251 PEQLAPLVGTAAKIAANSD----RIAAIVSEHG-LPQARQLATRYTDKAINALAPLPDAR 305
Query: 306 WKKSLMEVVDFCLQRLN 322
K+ L ++ L+R +
Sbjct: 306 IKQELRKLTQQLLRRDH 322
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
Length = 316
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 87/332 (26%), Positives = 138/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + E V + I I + ++Y + +GGKRLRP+L LAT +L
Sbjct: 25 DLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCELLGGTV 84
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LLS AF
Sbjct: 85 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFE 144
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V E + V L ++ L+ D++EE + KT
Sbjct: 145 FVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFIHTHKTG 204
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A + +++AG + + L Y N+G+AFQ+VDD+LD +E+GK G+D
Sbjct: 205 ALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELGKTAGKDLE 264
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L + +A
Sbjct: 265 AQKATYPSLW--------------------------------------GLEKSRAKAQQL 286
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L+ + +L + DF R +
Sbjct: 287 VEEAKAELQAFGNGGC--ALAAIADFITYRSH 316
>gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f.
lusitanicus]
Length = 471
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 60/372 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L D++++ I K + S + V ++ GK +RP+L L A +
Sbjct: 105 KLVGDDLKEIKANISKLLGSGHPFLNTVARHYFSGEGKHVRPLLVLLIAQATSIADKKSL 164
Query: 66 ------------------------------------------------LLACAIEFIHTA 77
LA E IHTA
Sbjct: 165 ASNIDYKSIDTPISHGLKNITTNDVFDRKLHYTPSVTDQGCIILPTQRRLAEISEMIHTA 224
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+LLHDDV+D S RR +A +GN+ +VL GDFLL++A + ++ E +E ++
Sbjct: 225 SLLHDDVIDASMTRRNLPSANASFGNKMAVLGGDFLLARASLALARLRNAECIELMATCI 284
Query: 138 CTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L EGE QL +K + T + Y+ KT L + + + S+++ G V
Sbjct: 285 ANLVEGEFMQLRNTKEGESGKVKKLSTFDHYMEKTYMKTGSLIAQSCKASAVLGGSTKEV 344
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+G NLG+AFQLVDD+LD+ E+GK G D + G T PV+ A++ + E
Sbjct: 345 ANIAYDFGKNLGLAFQLVDDMLDFTVTAAELGKPAGADLKLGLATAPVLFAWEEYPELEP 404
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
I + +KA ++ ++ L T A + + A D+L LP S + +L
Sbjct: 405 -----LIKRKFSVKGDEEKARDLVYQSDGLKKTLDLAQIHCKLATDALYKLPASDARSAL 459
Query: 311 MEVVDFCLQRLN 322
+++ + L R +
Sbjct: 460 VQITEKLLTRRS 471
>gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
Length = 260
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 108/261 (41%), Positives = 154/261 (59%), Gaps = 1/261 (0%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+
Sbjct: 1 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 60
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ +
Sbjct: 61 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEEIYMDVIYSKTARLFEAATQIGA 120
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A
Sbjct: 121 ILNDAPEDVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 180
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G + + I +E L + M E +L T +AY KA L L
Sbjct: 181 MRHGNDAQVAMIREAIEKAN-GMEKLTEILAAMEETGSLEYTRQKAYQEADKAIAELSVL 239
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+S +K++L+ + + R +
Sbjct: 240 EESEYKQALVTLAHMAVHRTS 260
>gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 326
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH 64
++ V L+++R+ + + I ++ GGK +RP L L A + +
Sbjct: 11 IQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET
Sbjct: 71 IKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIET 130
Query: 125 KS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + +GEL Q+ + + + T Y+ I KTA L S +
Sbjct: 131 MNGTSFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA +
Sbjct: 191 AGGDKKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLARE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + +S + ++ E+ + A + A + +R LP+
Sbjct: 251 VNDEAIAPY---LEAPENLSRQECLDLAELVTESGGIAGALLVAGRLTELALNEIRKLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
S ++ L E L+R
Sbjct: 308 SPNRQILEEATQILLER 324
>gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 324
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++++ I + ++ + + ++Y++ GGKR+RP LTL + +N + A
Sbjct: 8 LQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+
Sbjct: 68 LEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + A + G+ + +DV+EE+Y+ +I+ KTAVL + +L+ +L+ G
Sbjct: 128 QVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + K
Sbjct: 188 QEDASNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLANK 247
Query: 248 REKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +S ++ + +AF I E + TE + +Y + ++L+ L +
Sbjct: 248 EQVETLRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAPE 307
Query: 307 K-KSLMEVVDFCLQRLN 322
K L EV D + R +
Sbjct: 308 KLTILKEVCDHLMHRQS 324
>gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 336
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 10/316 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L ++++V+ + + + D ++ + S GK LRP L L A H+
Sbjct: 17 QLVKPELKQVSEFVEAQSSCFDPEVADYMETVCQSKGKMLRPALVLLVAGATGGIKPAHI 76
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
L +E +H A+L+HDDV+D++ RR + A +WGN +VL+GD L S A + E
Sbjct: 77 RLGALLEMVHLASLVHDDVIDEADKRRDEATANALWGNSLAVLLGDVLFSHAMVLGTEFG 136
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E L+ + +GE+ Q S +L +T E+Y +I+ KTA LFSAA + I+G
Sbjct: 137 STEFCRRLANTVRNVCQGEVAQSSRLYDLSMTREEYFEIIRKKTASLFSAATGGAGWISG 196
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V V ++L G LG+A+Q+ DD LD G+ ++ GK + D GK TLP+ + G
Sbjct: 197 VTPEVEESLYQLGDLLGVAYQIYDDCLDMVGDEDDAGKTLHTDATKGKLTLPIFNLLECG 256
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENR----ALVDTEYRAYSYGQKAKDSLRCL 301
+ + + I + ++ + ++N AL A + A++ L L
Sbjct: 257 DRNVEATLRDAIENREVVD------YSAFQDNPVFAEALDKAIQVALEKNEAAREILWLL 310
Query: 302 PDSSWKKSLMEVVDFC 317
P + ++++L E+ +
Sbjct: 311 PQTEYREALAEMTFYM 326
>gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella
elegans ATCC 700633]
gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella
elegans ATCC 700633]
Length = 325
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 13/329 (3%)
Query: 1 MKMLED------LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPM-LTLAT 53
M+M+ +++ + L+L + + E I + ++ GGK +RP LTL
Sbjct: 1 MEMIHSMWNEYPFLKQELSAIRHLMLDSVEMEDEDIHQAIVEMLQQGGKMIRPAYLTLFA 60
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+A A+E +H ATLLHDDV+D++ +RRG+ +GN+ ++ GDF+
Sbjct: 61 NWSNNGNPQQVRAVAAALELLHVATLLHDDVIDEADMRRGQETLNARYGNRVAIYAGDFV 120
Query: 114 LSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
L+ + ++ S + + EGEL Q+ D+ ++YL I+ K
Sbjct: 121 LTSCYQLLSTHLSDLEGITLPTNGMARVVEGELAQMRNRYRYDLGLQEYLKRIEGK--TA 178
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ Q K G +G+AFQ++DD+LDY+ E GK + ED G
Sbjct: 179 QLFMVSCYMGAKLGQMDDALRAKKIGQQIGMAFQILDDILDYQVTPQEFGKPVLEDVAQG 238
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
T P K + +IS + +++++ + + A Y +
Sbjct: 239 IYTAP---LIYALEKESQKIIPLLEKKQEISEQEKLLLRKLVQDSGGVQKAQQLAMQYTK 295
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A + LP+S K +L ++ L+R
Sbjct: 296 QALSQIERLPESDMKATLTQLTKQLLERT 324
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 52/332 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ K V + + + +I ++Y + GGKRLRP L +A A +
Sbjct: 1 MMNFKEELKKKAALVEEALERYLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IHT +L+HDD+ +D+ RRG++ V+G ++L GD LL+
Sbjct: 61 GGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ + ++ G + S ++ E ++ + K
Sbjct: 121 LAFELLANNDRARPENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L+ ++ +++AG Q +L +Y +LG+AFQ+ DD+LD G+ ++GK +G D
Sbjct: 181 TGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
RN K T P + + + +A
Sbjct: 241 VRNRKSTYPSLF--------------------------------------GMEYSRKKAR 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ AK +L+ L + F + R
Sbjct: 263 QAVEMAKAALQPF--GGEADFLRMLAQFVIDR 292
>gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
Length = 316
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 87/332 (26%), Positives = 136/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + E V + I I + ++Y + +GGKRLRP L LAT +L
Sbjct: 25 DLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCELLGGTV 84
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LLS AF
Sbjct: 85 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAFE 144
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V E + V L ++ ++ DV+EE + KT
Sbjct: 145 FVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFIHTHKTG 204
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A + +++AG + + L Y N+G+AFQ+VDD+LD ++GK G+D
Sbjct: 205 ALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITAPSEQLGKTAGKDLE 264
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L + +A
Sbjct: 265 AQKATYPSLW--------------------------------------GLEKSRAKAEQL 286
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L K+L + DF R +
Sbjct: 287 VEEAKAELAAFGYGG--KALAAIADFITYRSH 316
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + VN + + + E I + ++Y + +GGKR+RP+L +A + ++
Sbjct: 72 DFKAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGNE 131
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 132 SMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFE 191
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V + + LA+ ++ + + ++ + + KTA
Sbjct: 192 YVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTA 251
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 252 ALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLV 311
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L A
Sbjct: 312 ADKATYPKLL--------------------------------------GLEKAREFAEKL 333
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + L L+ + ++ R N
Sbjct: 334 KNEAIEQLDEFDPEEA-APLLALAEYIAHRQN 364
>gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 359
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 30/339 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-------- 56
L +++ + I + ++ E++ KY++ +GGK +RP L + A
Sbjct: 29 ALVSREVTAIKEHIQSLVTNTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSA 88
Query: 57 ---------LEYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
L+ + LA E IHTA+L+HDDV+D + RRG+ A V+
Sbjct: 89 RLLEEPIGPLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDKTDTRRGRPALHKVYDT 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GD++L++A + + + ++ L GEL Q+ ++ E+
Sbjct: 149 KRAVLAGDYILARASFYIATLQVPRIVILMTTALEELTSGELIQMDGCFDIPRYEQKSFC 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S A ++ ++ +G +LGIAFQ++DD LD G+ +GK
Sbjct: 209 KTASLIANSLASTAVLADPGNEALEQ---TAFDFGKHLGIAFQILDDCLDITGDEKMLGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G T+PV+L QR ++ + K + + A+ +
Sbjct: 266 PKLVDMKEGIATIPVLLVAQRNATVKEMVC-----RRFAEPGDAKFCLEAVEKEGAVAEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+RA + + +SL L S + +L + + R +
Sbjct: 321 MHRADEHCRLGLESLHKLHPSPARDALESALSMVMNRKS 359
>gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
[Callithrix jacchus]
Length = 308
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 13/312 (4%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-------LA 68
L + + S E + ++ +Y K RP++ A +N +A
Sbjct: 1 ETLFQELLISTSE-LKEMSEYYFDGKEKAFRPIIVALMARACNIHHNNSQHVQASQRTIA 59
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A + +
Sbjct: 60 LIAEMIHTASLVHDDVIDDASSRRGKHTVDKIWGEKKAVLAGDLILSAASIALARIGNTT 119
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L+ V E QL +N + YL KTA L + + + S++
Sbjct: 120 VISILTQVIEDSVRSEFLQLGSKENENERFAHYLEKPFKKTASLIANSYKAVSVLGCPDP 179
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A Q+ +
Sbjct: 180 VVHEIAYQYGKNIGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEM 239
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ G ++ +A + ++ + T Y A Y +A + L S +
Sbjct: 240 NAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAVREISKLRPSPERD 294
Query: 309 SLMEVVDFCLQR 320
+L+++ + L R
Sbjct: 295 ALIQLSEIVLTR 306
>gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
Length = 172
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/121 (63%), Positives = 98/121 (80%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L DL ME+VN LIL + S+V++IP++ ++LI SGGKRLRPMLTLA A M YR
Sbjct: 17 IEPLLDLVSGGMEEVNQLILSKAGSNVDLIPEIARHLISSGGKRLRPMLTLACADMFGYR 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
GD HV+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M
Sbjct: 77 GDGHVVLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 136
Query: 121 V 121
+
Sbjct: 137 M 137
>gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia]
gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia]
Length = 461
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 30/345 (8%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ D++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 175
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 176 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 235
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 236 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 295
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 296 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 355
Query: 237 PVILAF--------------------QRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
PV+ A + + ++++AF ++ +
Sbjct: 356 PVLFACEKMSIGYASKVASRRRNDDVFMVPAVKYPELNPMVMRRFSEPGDVERAFELVHK 415
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L T + A + +A + L +S ++K L V D + R+
Sbjct: 416 SHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 460
>gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 364
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 93/361 (25%), Positives = 142/361 (39%), Gaps = 63/361 (17%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----------------LEYRG- 61
I K + S + V KY + GK +RP++ L +
Sbjct: 8 IRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATSLCPKAPRQQYIQSAAGIDTS 67
Query: 62 ----------------------------------DNHVLLACAIEFIHTATLLHDDVVDD 87
+ LA E IHTA+LLHDDV+D
Sbjct: 68 ISPIGILGDANPSSSIQALDNQSDLSSHSDPDILPSQRRLAEITELIHTASLLHDDVIDH 127
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVACTL 140
S RRG +A L +GN+ +VL GDFLL +A + + E E L
Sbjct: 128 SESRRGSPSANLEFGNKMAVLGGDFLLGRASVALARLRDAEVTELLATVIANLVEGEFMQ 187
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
+ R S + YL KTA L S + S+L+ G A ++G N
Sbjct: 188 LKNTSRDESRPVWSEDALTYYLQKTYLKTASLISKSCRASALLGGADAQTVDAAYAFGKN 247
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG+AFQLVDD+LDY ++GK G D G T P++ A++ + + +
Sbjct: 248 LGLAFQLVDDMLDYTVSAVDLGKPAGADLELGLATAPLLFAWKNHPELGE-----LVGRK 302
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ +A I+ + + T A Y ++A +++ PDS K L+E+ L+R
Sbjct: 303 FSKEGDVARAREIVLASDGIEQTRALAQRYAEQAIEAISHFPDSEAKDGLIEMAAKTLKR 362
Query: 321 L 321
Sbjct: 363 K 363
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 51/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ + ++ ILK + S + + VKY + GGKRLRP+L +A ++
Sbjct: 2 ELKEYLKERKAIIDREILKYLPSVPPFGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACAIE IHT +L+HDD+ LRRG + T++L GD LL++A
Sbjct: 62 NYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNRA 121
Query: 118 FCMVIETKSQEALEALSLV-------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ + + + + G+ + DVT E+ L + + KT
Sbjct: 122 FEVLSQWNFDCDRKIKVIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRHKTG 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L +A++ + G LK YG ++G+AFQ++DDVLD G+ N++GKN+G D
Sbjct: 182 RLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNKIGKNVGSDLE 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T + + +A
Sbjct: 242 KGKVTFVTFF--------------------------------------GVDGAKRKAREE 263
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KA +L P + L ++ F ++R
Sbjct: 264 IEKAISALELFPAKKN-ELLKKLAHFIVER 292
>gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 319
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 2/311 (0%)
Query: 4 LEDLTLKD--MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ LKD + K + + I D++++ ++ Y I SGGKRLRP+L +L Y G
Sbjct: 1 MKASVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIRSGGKRLRPILHYCLCQLLGYSG 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + + +E IH A+LLHDDVVD++ RRG+ + +GN+T++L GD+LL+ +
Sbjct: 61 KHWLDVGAIVELIHAASLLHDDVVDEAETRRGQQSVGSKFGNKTAILAGDYLLACGIDHL 120
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ E ++ + V L+ EL Q+ KN +T + Y + KT+ LF A +
Sbjct: 121 NDLGYPELMDIFTQVIKDLSISELIQMEWEKNPKITLDIYNKIAYGKTSSLFGAVGVSAG 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++ + ++ L+ +G++LG FQ DD +DY ++ GK +DF NG T P++L
Sbjct: 181 ILSDKNDKEKKKLRQFGIDLGSFFQKKDDAIDYFTPASKSGKVPLKDFYNGLYTYPILLL 240
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ K +K S + S + ++ + + + L
Sbjct: 241 LDQADKNDKKLIHSLFAKPERSQGDEVVILSLLSRYQIRKQMDKEFQTIVNNLVKFLNSF 300
Query: 302 PDSSWKKSLME 312
P+SS + L E
Sbjct: 301 PESSIRNLLKE 311
>gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 324
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 159/317 (50%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++++ I + ++ + + ++Y++ GGKR+RP LTL + +N + A
Sbjct: 8 LQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+
Sbjct: 68 LEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + A + G+ + +DV EE+Y+ +I+ KTAVL + +L+ +L+ G
Sbjct: 128 QVLDLFTQTAAEICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLACSLKTGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + K
Sbjct: 188 QEDAGNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLANK 247
Query: 248 REKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +S ++ + +AF I E + TE + +Y + ++L+ L +
Sbjct: 248 EQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAPE 307
Query: 307 K-KSLMEVVDFCLQRLN 322
K L EV D + R +
Sbjct: 308 KLTILKEVCDHLMHRQS 324
>gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
Length = 321
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 30/325 (9%)
Query: 22 RICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN---------------- 63
+ ++V + +Y G GKR RP + L A L
Sbjct: 1 MVVAEVPKLASAAEYFFKMGVEGKRXRPTVLLLMATALNVPLPRPALAEVPETLSTELRT 60
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IH A+LLHDDV+DD+ RRG + ++ GN+ +VL GDFLLS+A +
Sbjct: 61 RQQCIAEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALA 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K+ E + L+ V L GE Q++ + V+ E YL KTA L S + + +L
Sbjct: 121 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIAL 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG V YG NLG+AFQL+DD LD+ G +GK D R+G T P++ A
Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDXLDFTGTSASLGKGSLSDIRHGIITAPILFAI 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
E + + G + ++ A + +R + T A + A +++ LP
Sbjct: 241 -----EEFPQLDAVVKRGLDNPADIDLALDYLGRSRGIQRTRELAMKHANLAAEAIDSLP 295
Query: 303 DS------SWKKSLMEVVDFCLQRL 321
+S +++L+++ + R
Sbjct: 296 ESGDEDVLRSRRALIDLTHRVITRT 320
>gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
Length = 326
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 149/319 (46%), Gaps = 8/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNH 64
+ KVN I RI + D ++ + +GGK LRP L A + +
Sbjct: 12 INNALGKVNQTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQEKL 71
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIE 123
+ +A ++E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F + V
Sbjct: 72 IKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLVET 131
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L + + GEL Q+ +LD + DY + KTA +FS A E +
Sbjct: 132 MTGSAYLTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYF 191
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ K G N+GI+FQ++DD+LDY G+ K + ED G +LP++L
Sbjct: 192 GHADHRTINLAKRIGQNIGISFQILDDILDYSGDERL-NKPVLEDLATGVYSLPLLLT-- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++++E+++K I+ + + + A + QKA+ + L D
Sbjct: 249 -LQNHRHELEPLLAKKRQMTIEDIEKVQKIVVTHGGVEQAQEIATKFTQKAQTEIDELAD 307
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+K L V + L R+N
Sbjct: 308 KHTRKMLKLVANKLLTRVN 326
>gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Microscilla marina ATCC 23134]
gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Microscilla marina ATCC 23134]
Length = 323
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 26 DVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+ + + + ++Y++ GGKR+RP+L L + + + A ++E H TL+HDD+
Sbjct: 21 EHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMNAALSVEVFHNFTLVHDDI 80
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LA 141
+D++ LRRGK W T +L GD +L QA+ ++++ S + +
Sbjct: 81 MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDIDSAHLKRVIGKFNRCAAEVC 140
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
EG+ ++ V E DYL++I+ KTAVL +LE+ ++A L +G+N+
Sbjct: 141 EGQQLDMNFEHIDAVPEADYLNMIRLKTAVLLGYSLELGGIVANANKVAADLLNGFGVNI 200
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+ FQL+DD+LD + + GK +G D K T +I A + + K + ++ +
Sbjct: 201 GVGFQLMDDLLDVYADAAKFGKQVGGDIIANKKTFLLINALKLAEGKTKQALERWLSLTE 260
Query: 262 ISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQ 319
+A + + + TE + Y L + + K +L +
Sbjct: 261 FDKAEKVQAVTEIYNHLGIKALTEAKMNEYFDMGLQQLDAIEANETAKAALRAFTVQLMN 320
Query: 320 R 320
R
Sbjct: 321 R 321
>gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
23]
gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
23]
Length = 324
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++KVN + + + D +KY++ GGKR+RP+LT+ + + + + A
Sbjct: 8 LKKVNEALDNLVYDRQPASLYDPIKYVLSIGGKRVRPVLTMLAYNLYKDDPLSIMSQALG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---Q 127
+E H TLLHDD++D + +RRG W ++L GD +L QAF V +
Sbjct: 68 LETYHNFTLLHDDLMDHADMRRGHETVHKKWDANRAILSGDTMLLQAFERVEDCDPAKLP 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + EG+ + + DVTE++Y+ +I+ KT+VL + A +V +++A
Sbjct: 128 AVFKVFIQTTLEIGEGQQLDVEFEQRNDVTEDEYIEMIRLKTSVLLACACKVGAIMADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + +G LG+AFQL DD+LD G+ GKNIG D + K T +I AF R T
Sbjct: 188 AEDIENMYKFGEKLGLAFQLQDDLLDVYGDPAVFGKNIGGDITSNKKTYMLINAFNRATP 247
Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ + + E + + E E + Y Q++ L + S
Sbjct: 248 AQREELTKWVEAKEFDRNEKVAAVTNLYNEIGIRKLCEQKIEQYYQESLVYLTKVSASEE 307
Query: 307 KKS-LMEVVDFCLQRLN 322
+K+ + ++R +
Sbjct: 308 RKAEIKAYAAEMMKRQS 324
>gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
Length = 323
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 10/316 (3%)
Query: 17 FLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + + S + + + ++Y++ GGKR+RP+LTL A + V A +
Sbjct: 8 DALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRPALGV 67
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H TL+HDD++D + LRRG+ W ++L GD +L A+ +++ ++ +
Sbjct: 68 EVFHNFTLMHDDIMDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVEADKLAV 127
Query: 132 ---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
S A + EG+ ++ DV+E +Y+ +I+ KT+VL +LE+ LI G
Sbjct: 128 ALARFSRTAAEVCEGQQMDMNFETRWDVSEAEYIDMIRLKTSVLLGYSLELGGLIGGADE 187
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
L GMN+G+ FQL DD+LD G+ + GK +G D K T +I A +
Sbjct: 188 ETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAKFGKQVGGDIIANKKTFLLIEALAQAKGP 247
Query: 249 EKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ + K E +K I + TE R Y + + + +
Sbjct: 248 LRDELIDWLTRTKFDKAEKVKAVTAIYDQLGIRELTELRINEYFARGFANFDQINARPER 307
Query: 308 K-SLMEVVDFCLQRLN 322
K L++ ++R +
Sbjct: 308 KGLLIQFARQLVERES 323
>gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
Length = 343
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 23/342 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +LE L +++ ++K + +V E D V Y + +GGKRLRP++TL A
Sbjct: 1 MDILEKLHSLYGREIDEQLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +E IH +L++DD++D++ LRR K R +G+ ++L+G +
Sbjct: 61 DYRVALPAAAIVELIHNYSLIYDDIIDEALLRRNKPTVRAKYGDYAAILIGIWYREAIEE 120
Query: 120 MVIETKSQEALEALSLVAC--------------------TLAEGELRQLSLSKNLDVTEE 159
++ET+ A + L N +
Sbjct: 121 AILETRDPIAFARETANTIRAIDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEALYN 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
Y+ +I KTA L A ++ A + ++ L YG LG+AFQ++DD+LD G+V
Sbjct: 181 TYVKMISLKTAALIRTAAVFGAMSANAPHCIK-PLSDYGTYLGLAFQVLDDILDIFGDVK 239
Query: 220 EMGKNIGEDFRNGK-PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ GK IG+D + K V++A + +++ S + ++ +++K+A I+ +
Sbjct: 240 KFGKEIGKDIKEHKLGNAVVVMALKELGDKDREELLSILGKTTVTNDDVKRAVEIISKTN 299
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + A + +K++ +L L + + L E++ F + R
Sbjct: 300 ARGNALRIAMDFAEKSERALSELGSNEFVDDLREILRFTVTR 341
>gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans]
gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans]
Length = 461
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 30/345 (8%)
Query: 7 LTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
+ D++ + + S + + Y GK LRPM+T+ A + Y +
Sbjct: 116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 175
Query: 63 ------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS
Sbjct: 176 SHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSI 235
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A M+ +S + LS + L +GE QL + + YL KTA L + A
Sbjct: 236 ASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANA 295
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L+ +++IA ++V + YG N+G+AFQLVDD+LD+ +MGK D + G T
Sbjct: 296 LKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATA 355
Query: 237 PVILAF--------------------QRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
PV+ A + + ++++AF ++ +
Sbjct: 356 PVLFACEKMSIGYASKVASRRRNDDVFMVPAVKYPELNPMVMRRFSEPGDVERAFELVHK 415
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L T + A + +A + L +S ++K L V D + R+
Sbjct: 416 SHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 460
>gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
Length = 321
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ I K + + + ++Y++ GGKR+RP+LTL + +
Sbjct: 4 IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALN 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A AIE H +L+HDD++D+++LRRGK W +L GD +L A+ ++ + S
Sbjct: 64 AATAIEVFHNFSLIHDDIMDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDYPS 123
Query: 127 QEALEALSLVAC---TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ E + ++ + EG+ + K +V+ E Y+ +I KT+VL AAL++ S+I
Sbjct: 124 EIFQELVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSII 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + + ++G+NLGIAFQL DD LD G+ + GK IG D K T+ + +
Sbjct: 184 SETTKENQMNMYNFGLNLGIAFQLQDDYLDTFGDAS-FGKKIGGDIIENKKTILYLKSLA 242
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++++ ++ + + I + A +Y QKA L +
Sbjct: 243 LSNEKQREELLRAYALNEV-DNKIARVREIFQITNADKAVRQLIENYTQKALMILEKITI 301
Query: 304 SSWK-KSLMEVVDFCLQRL 321
K + L + R
Sbjct: 302 GDDKREYLRTFALQLMDRK 320
>gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides
distasonis ATCC 8503]
gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp.
2_1_7]
gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides
distasonis ATCC 8503]
gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
Length = 324
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 6/317 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++++ I + ++ + + ++Y++ GGKR+RP LTL + +N + A
Sbjct: 8 LQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+
Sbjct: 68 LEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + A + G+ + +DV+EE+Y+ +I+ KTAVL + +L+ +L+ G
Sbjct: 128 QVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + K
Sbjct: 188 QEDAGNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLANK 247
Query: 248 REKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +S ++ + +AF I E + TE + +Y + ++L+ L +
Sbjct: 248 EQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAPE 307
Query: 307 K-KSLMEVVDFCLQRLN 322
K L EV D + R +
Sbjct: 308 KLTILKEVCDHLMHRQS 324
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 83/332 (25%), Positives = 131/332 (39%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ + V + I I D ++Y + +GGKRLRP+L LAT ++
Sbjct: 16 DVKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTV 75
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK V+G ++L GD LL+ AF
Sbjct: 76 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V+E E L + L ++ L D+ E + KT
Sbjct: 136 YVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTG 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ +L+ G S L Y N+G+AFQ+VDD+LD + +GK +G+D
Sbjct: 196 ALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVA 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L + A
Sbjct: 256 AQKMTYPRLW--------------------------------------GLEKSRQEAERL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK L + L + D+ R +
Sbjct: 278 VAEAKAELAVY--GAAAVPLQAIADYITSRSH 307
>gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++K+ I R+ + + ++Y++ GGKR+RP L L + + D + A
Sbjct: 8 LQKIEQEI-TRLQFTYPPKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIKPAL 66
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E H TLLHDD++D++ RR K VW + T++L GD +L A+ ++ ETKS+
Sbjct: 67 GLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGETKSESL 126
Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E L L T + G+ + DVTE +Y+ +I+ KTAVL + AL++ +++
Sbjct: 127 KEILDLFTRTALEICGGQQYDMEFESRTDVTEAEYIEMIRLKTAVLLACALKMGAIMGNA 186
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ +AL +G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + +
Sbjct: 187 PEADAEALYQFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFMLINALRLAS 246
Query: 247 KREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
+K + I E + I + + +E + ++Y +A + L L DS
Sbjct: 247 DTQKAELNNWIGKKTFDPAEKIASVTAIYDQLQLKELSEEKIHAYYNQAMNCLASLSVDS 306
Query: 305 SWKKSLMEVVDFCLQRLN 322
L V + R +
Sbjct: 307 ERLTILKGVSARLMNRQS 324
>gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88]
gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger]
Length = 450
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 97/371 (26%), Positives = 156/371 (42%), Gaps = 62/371 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + + + + S + V KY S GK +RP+L L +
Sbjct: 83 MVGKELKFLTKNLRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALCPRKTGT 142
Query: 57 -----------------------------------LEYRGDNHV-----LLACAIEFIHT 76
++ GD + LA E IHT
Sbjct: 143 DNNSATVNDPISSPSILVDNNPDLDALSSGSADAPYDFAGDKDILPTQRRLAEITELIHT 202
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+LLHDDV+D++ RR +A L +GN+ +VL GDF+L +A + + E +E +S V
Sbjct: 203 ASLLHDDVIDNAVSRRSLTSANLQFGNKMAVLAGDFMLGRASVALARLRDPEVIELMSTV 262
Query: 137 ACTLAEGELRQ-------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L EGE Q D T YL KT L S + ++++
Sbjct: 263 ITNLVEGEFMQLKNTAADEKNPVFTDDTLSYYLQKTYLKTGSLISKSCRSTAVLGHSAPE 322
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A+++ +
Sbjct: 323 VVEASYQYGRNLGLAFQLVDDMLDYTLTEAELGKPAGADLELGLATAPLLFAWKQFPELG 382
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ +++KA ++ + + T A Y KA ++ PDS K
Sbjct: 383 P-----LVGRKFSQPGDVQKARELVIKADGVEQTRILAQEYADKAVAAISDFPDSDAKAG 437
Query: 310 LMEVVDFCLQR 320
L ++ + ++R
Sbjct: 438 LAQMCEKTMKR 448
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + VN + + I D +I + ++Y + +GGKR+RPML LA ++
Sbjct: 74 NFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELVGGDQ 133
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
N + ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 134 SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFE 193
Query: 120 MVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + S+ L G++ ++ + N +V + + KTA
Sbjct: 194 YIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTA 253
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+ + +G+ FQ+VDD+LD +GK G+D
Sbjct: 254 ALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAGKDLA 313
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 314 VDKTTYPKLL--------------------------------------GLEKAKEFAAEL 335
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ AK L L+ + D+ R N
Sbjct: 336 NRDAKQQLVEFDPHKA-APLIALADYIAYREN 366
>gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 343
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 5/324 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + M V + + + + DV +L+ +GGKRLRP LTL + +
Sbjct: 21 ALAARLAERMAVVEQSLADAVANADRLADDVAHHLVAAGGKRLRPFLTLLAGELGDGART 80
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A +E H A+L HDDV+D + LRRG + VWGN ++LVGD L ++A V
Sbjct: 81 ELVDAAVVVELTHLASLYHDDVMDSAPLRRGAPSVHSVWGNSVAILVGDLLFARASARVA 140
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ L G+L + + + + YL V+ KTA L + + + ++
Sbjct: 141 GLGPEAVRLQAETFER-LCLGQLHETTGPAEGEDPAQHYLQVLADKTASLLATSARLGAM 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---I 239
G + + +YG +G+AFQ+ DDVLD +E GK G D R PT+PV
Sbjct: 200 FGGAPAEQVEVVAAYGEKVGVAFQIADDVLDLASTGSESGKTPGTDLRERVPTMPVLLLR 259
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
RG + DG +S + + +R + L T A + ++A L
Sbjct: 260 QRLARGEGDADDAALVAALDGDLSSDAVLADVVERLRAHEVLTQTRELAARFAREAAAEL 319
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LP +++L R +
Sbjct: 320 APLPHGPVREALESFATALTDRAS 343
>gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 335
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 10/316 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+V I + IC + ++ + GK LR ++ L N + +A E
Sbjct: 19 RVKNRISESICDSDLPLYSAARHYM-GKGKHLRALMLLLACGATGGEPSNAIDIAAGHEI 77
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+HT +L+ DD++D S RRG + +G T++L D+L +AF +
Sbjct: 78 LHTFSLVQDDIMDKSEKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNA 137
Query: 134 SLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ EG+ L+ + + E+DYL +I KTAV F + +IA
Sbjct: 138 KRSRLLKEILELGMVICEGQFLDLNFERKFSLAEDDYLDMIYKKTAVFFEKVCTIGGIIA 197
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
++ G LG+AFQ+ DD+L + G+ + K++ D GK TLP+I Q+
Sbjct: 198 DTSEENIHSISEMGKCLGMAFQIKDDMLSFFGDEKVVEKSLVSDVEGGKITLPIIYVLQK 257
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ EK+F K+ + N+ I++ E A Y +AKD L LP S
Sbjct: 258 ASTSEKDFIKNLFEKQHVEPGNIDCLKKILQSYDVEDYAEGIAMKYISRAKDKLAELPYS 317
Query: 305 SWKKSLMEVVDFCLQR 320
+ L +++F L R
Sbjct: 318 YEIQILDGLLNFALYR 333
>gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
43184]
gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
43184]
Length = 324
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++K+ I R+ + D ++Y++ GGKR+RP L L + + D V A
Sbjct: 8 LQKIEQEI-TRLQFTYPPKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVNPAL 66
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E H TLLHDD++DD+ RR K VW T++L GD +L A+ ++ ET+S+
Sbjct: 67 GLEVFHNFTLLHDDLMDDADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGETESESL 126
Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E L L T + G+ + DVTEE+Y+ +I+ KTAVL + AL++ +++
Sbjct: 127 KEILDLFTRTALEICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLACALKMGAIMGNA 186
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + L +G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + +
Sbjct: 187 PKADAETLYQFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFMLINALRLAS 246
Query: 247 KREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+K S I E + I + R +E + ++Y +A + L L +
Sbjct: 247 NTQKAELNSWIGKKTFDPAEKIAAVTAIYDQLRLKELSEEKIHAYYNQAMNCLTSLNVAP 306
Query: 306 WK-KSLMEVVDFCLQRLN 322
+ L EV + R +
Sbjct: 307 ERLNILKEVSARLMNRQS 324
>gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 452
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 89/335 (26%), Positives = 159/335 (47%), Gaps = 27/335 (8%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALMLEYRG---- 61
L +++ V I + + +D ++ V KY GGK++RP + L + E
Sbjct: 124 LVQTELQSVTESIKQILGTDHPVLSTVAKYFFEQDGGKKVRPTMVLLMSQAAEVNRLSNE 183
Query: 62 -------------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
LA E IHTA+LLHDDV+D++ +RRG + V+G++ S+L
Sbjct: 184 LPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDDVIDEAEMRRGIQSVNRVFGDKLSIL 243
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--EDYLHVIK 166
GDFLL+++ + ++ + +E +S + L +GE+ Q+ +N E YL
Sbjct: 244 AGDFLLARSSVCLARLRNVKVVELMSTIIEHLVKGEVMQMRNVQNRSNISLLEYYLRKNY 303
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L + + + + + + V + +YG +LG+AFQL+DDVLDY G + GK +
Sbjct: 304 YKTASLMANSCKAALTLGQHTDYVCEMGFAYGRHLGLAFQLIDDVLDYEGLES--GKPLL 361
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R G T P++LA E K+ + ++ +A+ ++ ++ + T+
Sbjct: 362 ADLRCGVITAPLLLAQ-----EEFPQLKALSDRKFSRDGDIDQAYELVCQSSGIQKTKDL 416
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A A D++ S + +L+ + + R
Sbjct: 417 AIDQANLACDAILQFAASPARDALVRLAQCIVIRS 451
>gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
Length = 312
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ + + + +++ I +GGK LR L L A E V AI
Sbjct: 6 LEQIQQRLEQVATLREPQVHTLIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAI 65
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H ATL+HDDV+D + +RRG GN+ ++ GDFL + F ++ E +
Sbjct: 66 EALHLATLVHDDVLDHADIRRGMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDL 125
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GE+ Q S L T YL I KTA LF+ A + I + +
Sbjct: 126 RTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSATQ 185
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +G LG+AFQ++DD+LDY + K ED NG TLP +
Sbjct: 186 KKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLP----LIYAYQTVP 241
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + N + I+R++ L A++Y +A +L LP S K +L
Sbjct: 242 DQLTPLTKTAEQIAANADEIAAIVRKHG-LPQAHQLAFTYTHRAIAALNPLPSSPTKAAL 300
Query: 311 MEVVDFCLQRLN 322
++ LQR +
Sbjct: 301 TKLTQQLLQRTH 312
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ VN + + I D ++Y + +GGKR+RPML +A ++
Sbjct: 72 NFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQ 131
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 132 SAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFE 191
Query: 120 MVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + A E + ++ L G++ L+ + + +V + + KTA
Sbjct: 192 FMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTA 251
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+++ +G+ FQ+VDD+LD E+GK G+D
Sbjct: 252 ALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELGKTAGKDLA 311
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L A
Sbjct: 312 VDKTTYPKLL--------------------------------------GLDKAMEFAEKL 333
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L S L + D+ R N
Sbjct: 334 NEEAKAQLAGFDPSKA-APLTALADYIAHRQN 364
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 50/320 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
VN + K + + + I ++Y + +GGKR+RP+L +A ++ + ACA+E
Sbjct: 90 NVNEALDKAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIAACELVGGDEAAAMPSACAME 149
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK ++G +T++L GD +LS AF + +
Sbjct: 150 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSP 209
Query: 131 EALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + V L + S+ +V +D ++ KTA L AA+ ++
Sbjct: 210 ERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAI 269
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
G + + ++ Y +G+ FQ++DD+LD E+GK G+D + K T P +L
Sbjct: 270 AGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELGKTAGKDLVSDKATYPKLL-- 327
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A +A L
Sbjct: 328 ------------------------------------GIDEARKLAAKLVDEANQELAYF- 350
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS+ L ++ R N
Sbjct: 351 DSAKAAPLYHFANYIASRQN 370
>gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
9790]
gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
9790]
Length = 345
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 76/342 (22%), Positives = 144/342 (42%), Gaps = 24/342 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATAL 55
+ L+D K+++ K++ + + I ++++ +GGKRLRP++ +
Sbjct: 8 LSSLKDKIEKELKNF---FEKKLDACDDENIRYVIKELME-FTMNGGKRLRPIMMITGYS 63
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--------- 106
+ DN + + +IE + L+HDD++D S +RRG+ + + +
Sbjct: 64 LFNDIDDNIIKASISIELAQSYLLIHDDIMDQSDMRRGRPSFHRSVETRLNDPRNSMNIA 123
Query: 107 -----VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
++ + A S V +G+L + S + + +E
Sbjct: 124 IVAGDLIDSFSHEALLTSGFDIKNLISADYEFSKVIEDTGKGQLIDIFSSLDDEFSESRL 183
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+ + KTA V + L+ YG N+GIAFQ+ DD+L G+ +
Sbjct: 184 MKLHYMKTARYTIEGPLVMGAMLAGNKKDIDYLRIYGKNIGIAFQIKDDILGLFGDEKQT 243
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK+I D GK TL +I A++R +++ K+ ++ G IS + KK I+ +
Sbjct: 244 GKSIKSDVNEGKKTLLMIKAYERSNNMIRDYIKTCLSSGDISDIDFKKLKDIVVSTGSYD 303
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQRLN 322
+ K K +L+ + + K L + D+ L R N
Sbjct: 304 YSLKIMEDLISKGKSALKMVSGNEESKAMLEYLSDYILNRSN 345
>gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 345
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 110/264 (41%), Positives = 168/264 (63%), Gaps = 1/264 (0%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ +N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GDNH+ LA
Sbjct: 80 KELIILNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLAS 139
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F ++I + S +A
Sbjct: 140 AVEFIHTATLLHDDVVDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGSIKA 199
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSSLIAGVQN 188
+ L+ + ++EGE+ QL + + I LF A+ EV ++IA +
Sbjct: 200 MNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGASCEVGAIIAEQLD 259
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I + + +
Sbjct: 260 HVSKDMQDFGKLLGTIFQVIDDLLDYWGNDKQVGKNIGDDFLEGKVTLPLIFLYNKLEQD 319
Query: 249 EKNFWKSTINDGKISVENLKKAFI 272
+ + ++ I K + + +
Sbjct: 320 TQLWLENIIKCDKRTNDEFMQIRD 343
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D + E V + I I + ++Y + +GGKRLRP+L LA +
Sbjct: 10 NLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLAACELAGGTI 69
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK +G ++L GD LL+ A+
Sbjct: 70 EMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYE 129
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V Q E + V L ++ L DVT + KT
Sbjct: 130 HVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTG 189
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +AG + + N+G+AFQ++DDVLD ++GK G+D
Sbjct: 190 ALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAGKDVA 249
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + +++ +A
Sbjct: 250 AQKATYPSLW--------------------------------------GIPESKRQAQHL 271
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L + S L + DF R +
Sbjct: 272 IEEAKAELAVYGEQSA--PLQALADFITSRQS 301
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +KV + K + +I ++Y +F+GGKRLRP+L L + M+
Sbjct: 4 RELEEYINLSQKKVEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKD 63
Query: 61 ---GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +V+G ++L GD LL+
Sbjct: 64 QIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + + + G++ ++ S +EE +
Sbjct: 124 LAAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG ++ V L+ YG NLG+AFQ+ DDVLD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLEKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSQKAIDVIKKYDNSE---LLIELTNYLINR 297
>gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
Length = 323
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVL 66
D+ L+ K + + + + +I SGGK LRP L +A + + V
Sbjct: 8 LQADLSASLQLMEKSLKLKNKEVEQAILSMIHSGGKLLRPAYQLLFSAYGSDKDREKAVA 67
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTA+L+HDD+VD + RR R +GN +V GD+L F ++ + S
Sbjct: 68 LAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYAS 127
Query: 127 QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ S + GEL Q+S +L VT EDYL I+ KTA LF+ + + + +G
Sbjct: 128 SMKSLQMNSRSMEKILAGELGQMSKRYDLSVTVEDYLENIRGKTAELFALSCFIGAYESG 187
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G +G+AFQ++DDVLDY + +GK + ED R G +LP+++A
Sbjct: 188 TSLRFANQAREIGEAIGLAFQIMDDVLDYSQDAAALGKPVLEDVRQGVYSLPLLMA---L 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS- 304
+ ++ + + + I++E+ + + + A Y +KA +++ LP++
Sbjct: 245 KSDRQQLLPLLEKQDAMTDTDTHEVYRIVQESAGIEEAKKLAADYTKKALQAIQKLPETK 304
Query: 305 -SWKKSLMEVVDFCLQRLN 322
K L ++ L R N
Sbjct: 305 DETKTYLYQITAQILGRQN 323
>gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 361
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 3/314 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L D+ + +L+ S V +I + + SGGKRLR L + A + Y+ + +
Sbjct: 50 ILADLGAIEQRLLELTHSRVAVISAAGAHTVRSGGKRLRAALAVLAARLGHYQLNRVIHP 109
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A E IH A+L+HDD+VD + RRG++ W N +++VGD+ + A + +
Sbjct: 110 AAAAELIHAASLVHDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDP 169
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + T+ EGEL +++++ LD YL+ +KTAVLF AA + + G
Sbjct: 170 RIITFYAEAVQTICEGELSPVTVAEPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGGGS 229
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ AL YG +LG+AFQ++DDVLD+ G+ +GK G D R G TLP+I A
Sbjct: 230 DDQILALGRYGYDLGMAFQIIDDVLDFIGDERMLGKPAGNDLRQGTITLPLIYATAASPN 289
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + + + + A Y ++A L P +
Sbjct: 290 PLLREVLMHNPPPDP---LVSEVIREVIAVGGVAAAQTEAERYIEQAIAHLDIFPPGPAR 346
Query: 308 KSLMEVVDFCLQRL 321
++L+++ F ++R
Sbjct: 347 QALIDIAHFVIERK 360
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 57/333 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L+ + +++ ++ + E+I + ++Y +F+GGKRLRP+L L+ +L
Sbjct: 7 KNLQQMVEEELHRILD-----VQEKPEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDL 61
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +AC+IE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 62 KKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYE 121
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++I + + ++ C G + LS+N ++T E+ ++ + KT
Sbjct: 122 VLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKYIHEHKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A++ + +AG + L+ Y +G+AFQ+ DD+LD G+ +GK +G D
Sbjct: 182 AALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSDR 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T I + ++
Sbjct: 242 EKGKFTFVNIF--------------------------------------GVEKSQEMVKE 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L + L ++ ++ ++R+N
Sbjct: 264 LTDEAIKILDTF--GERAQFLKDLSNYLIERVN 294
>gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
clavatus NRRL 1]
gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
clavatus NRRL 1]
Length = 451
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 144/372 (38%), Gaps = 63/372 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 83 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPRQSRS 142
Query: 57 --------------------------------------LEYRG---DNHVLLACAIEFIH 75
LA E IH
Sbjct: 143 NFTPSQMVNDPISSPSVLADTNPDLSPLVSKSAEAQYDFAGDENILPTQRRLAEITELIH 202
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL +A + + E E L+
Sbjct: 203 TASLLHDDVIDNAVTRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLAT 262
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-------QN 188
V L EGE QL + + I + + S
Sbjct: 263 VIANLVEGEFMQLKNTAADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTP 322
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V A +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A+++ +
Sbjct: 323 EVVDAAYAYGRNLGLAFQLVDDLLDYTVSGVELGKPAGADLELGLATAPLLFAWKQNPEL 382
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ +++ A ++ ++ + T A Y KA ++ PDS K
Sbjct: 383 GP-----LVGRKFSREGDVQMARELVYKSDGVEQTRALAQEYADKAITAVSNFPDSEAKA 437
Query: 309 SLMEVVDFCLQR 320
L+++ + + R
Sbjct: 438 GLIQMCEKAMNR 449
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 140/334 (41%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ + + V+ + + + E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IHT +L+HDD+ +D+ RRG V+G T++L GD LL++A
Sbjct: 62 SPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEA 121
Query: 118 FC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F A++ + + G++ + DV ++ K
Sbjct: 122 FILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIHTHK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ G +AL Y +G+AFQ+ DD+LD G E+GK+ G D
Sbjct: 182 TGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDAGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P ++ L ++ RA
Sbjct: 242 QARGKATYPALM--------------------------------------GLEASKARAR 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A D+L + + L + + ++R +
Sbjct: 264 ELVQIALDALEPFDLRA--EPLRAIASYIVKRKS 295
>gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
Length = 341
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 81/323 (25%), Positives = 152/323 (47%), Gaps = 12/323 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---- 63
KDM +++ +IL + S ++ ++ GK LRP + D
Sbjct: 21 VQKDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFG-AFGPDADQKHDE 79
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVI 122
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L++ + +
Sbjct: 80 LQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLSE 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S ++ A + GE Q + + N+D++E++YL IK KT VLF A + +
Sbjct: 140 NAQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAY 199
Query: 183 IAGVQNSVRQ---ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+G + + K +G LG AFQL DD+LDY + K + D ++G + P+I
Sbjct: 200 ESGTKVTKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLI 259
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A Q + + ++ + L + ++ + + A Y +KA SL+
Sbjct: 260 FALQ--NDDNNHLHELVKMGKDLTQDQLHEIENLVNHLGGVERAQKLADQYTEKALASLK 317
Query: 300 C-LPDSSWKKSLMEVVDFCLQRL 321
PD+ + + ++ L+R
Sbjct: 318 KHWPDNENRALIEQLTGRLLKRQ 340
>gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member
(coq-1)-like [Oryctolagus cuniculus]
Length = 512
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 42/318 (13%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------ 63
+D++ + I K + + ++ +Y GK RP++ + A +N
Sbjct: 228 RDLKGLYEDIRKELLISTAELKEMSEYYFDGKGKAFRPVIVVLMARACNIHHNNSRDVQA 287
Query: 64 -HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +
Sbjct: 288 SQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKVI--------------- 332
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L GE QL +N + YL KTA L + + + S+
Sbjct: 333 ---------------EDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSV 377
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A
Sbjct: 378 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 437
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q+ + + G ++ +A + ++ + T Y A Y +A + L
Sbjct: 438 QQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLR 492
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + +L+++ + L R
Sbjct: 493 PSPERDALIQLSEIVLTR 510
>gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
ATCC 11577]
gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
ATCC 11577]
Length = 325
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ +LK + + + + L+ SGGK LRP + D
Sbjct: 12 IQLKLIQLEPYLLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGENIPADKLRA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125
A AIE +H ATL+HDDV+D S LRRG +G + ++ GD+L + F ++ T
Sbjct: 72 GAAAIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTH 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L+ T+ GEL Q++ + D++++DY H I KTA LF + E S+++
Sbjct: 132 DATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTH 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q
Sbjct: 192 APRDIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTA 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++KK I+ ++ L A QK + LP+ +
Sbjct: 252 G---TQLAPLLGKKQDLKEADIKKIQEIVIKSGGLKRAHEIANQLTQKTLALINRLPEQN 308
Query: 306 WKKSLMEVVDFCLQR 320
KK L + + LQR
Sbjct: 309 SKKELRRLTNLLLQR 323
>gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +KV + K + +I ++Y +F+GGKRLRP+L L + ML
Sbjct: 4 RKLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKD 63
Query: 61 GD---NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +V+G ++L GD LL+
Sbjct: 64 QEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + E S + G++ ++ S +EE +
Sbjct: 124 LAAEVCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG +N V ++ +G NLG+AFQ+ DD+LD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLEKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSQKAIDVIQKYDNSE---LLIELTNYLINR 297
>gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1]
gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1]
Length = 329
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 12/322 (3%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDN 63
L K +E+VN LI I + + D + + +GGK LRP L + +A + +
Sbjct: 12 LIRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQ 71
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ LA +IE +H A+L+HDD++DDS RRGK++ + +G T+V GD L + F +++
Sbjct: 72 IIQLASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILN 131
Query: 124 TKSQEALEALS-LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S++ + L GEL Q++ NL DYL +K KTA LF A E S
Sbjct: 132 AISEQDYMIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAEEGSH 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
QAL S+G NLGIAFQ+VDD+LDY G GK++ + T L
Sbjct: 192 FGNGDEQTTQALASFGENLGIAFQIVDDILDYTG-----GKHLNKPTLEDLTTGVYSLPI 246
Query: 243 QRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + ++S ++++ I+ + + +T A Y +A +L
Sbjct: 247 LLALSKKELREQLVPLLEKKRQMSKNDIEQIQKILLNSSVIEETHALAEQYTNRALANLA 306
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP ++ L ++ + R
Sbjct: 307 QLPQTNATVLLKKMTRKLVNRT 328
>gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
Length = 327
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 10/305 (3%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + ++Y++ GGKR+RP+L L + + + + A AIE H TLLHDD++D
Sbjct: 24 PAELYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQAVAIEIYHNYTLLHDDLMD 83
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA----E 142
+ +RRG W + ++L GD +L A+ + + E L + + A E
Sbjct: 84 RADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPAEHLGDVMSLFTETALEIGE 143
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ + DV+EE+Y+ +I+ KT+VL + AL++ + + G + L +G NLG
Sbjct: 144 GQQYDMEFEARADVSEEEYIEMIRLKTSVLLACALKIGAWLGGAPRQDAELLYRFGENLG 203
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQL DD LD G+ GK IG D K T +I A R ++ + + +
Sbjct: 204 LAFQLQDDYLDVYGDPAVFGKKIGGDILCNKKTYMLINALGRALPADRERLEQWLKKEEG 263
Query: 263 S---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFC 317
+ E + + + + + Y ++A++ L LP+ K+ L E+
Sbjct: 264 TYVPEEKIAAVTALYNKMGIRALCDEKIRFYYERAREILDKVNLPE-ERKEPLWEMAQSL 322
Query: 318 LQRLN 322
L R +
Sbjct: 323 LNRKS 327
>gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
Length = 343
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 151/313 (48%), Gaps = 12/313 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--------EYRGDNHV 65
+ + + S+VE I + + L+ +GGKRLRP++TL +A L + +
Sbjct: 30 AFEQRLREVLRSEVEFIELIGEDLVAAGGKRLRPLVTLLSAQALQVGAPEDAGGHHGDAL 89
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ-AFCMVIET 124
LA IE +H+A+LLHDD++DD+ RRG+ AA +GN SV+ GDF+L++ +
Sbjct: 90 ALAICIELLHSASLLHDDLIDDADTRRGQEAAFRRYGNVVSVMSGDFMLARLLMLLSELP 149
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A VA + EGE+ Q ++ + T E Y +I KTA L A +L+
Sbjct: 150 AAARLTRAFGEVASVICEGEVLQFQVAAYGNPTPEQYSRIIYGKTAALLELAAAAPALLL 209
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + QAL+ YG LG+AFQ+ DD+LD G ++GK +G D R GK T V+
Sbjct: 210 GASAAQEQALRQYGRELGMAFQIRDDLLDLLGREEDLGKPVGSDLREGKATFAVLQLLDT 269
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
++ + +L + + E A + A+ +L LP S
Sbjct: 270 PAGE---EVRAILLRRAAHGGDLARVQALCAEYGAAEAGWREVARRLELARAALLDLPAS 326
Query: 305 SWKKSLMEVVDFC 317
++ L ++D
Sbjct: 327 PARQELETLLDRL 339
>gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus
(Silurana) tropicalis]
gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis]
Length = 292
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 12/295 (4%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-------LLACAIEFIHTATLLHDDVV 85
+ Y GK RPML + A +N +A E IHTA+L+HDDV+
Sbjct: 1 MCDYYFDGKGKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDVI 60
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S RRGK +WG + +VL GD +LS A + + + +S +A L GE
Sbjct: 61 DGSDSRRGKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEF 120
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
QL +N + Y+ KTA L + + + S++A +V + YG N+GIAF
Sbjct: 121 LQLGSKENENERFSHYIEKTFKKTASLIANSCKAVSVLACPDPAVHEIAYQYGKNIGIAF 180
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL+DDVLD+ +++GK D + G T PV+ A Q+ + + G
Sbjct: 181 QLIDDVLDFTSCADQLGKPAAADLKLGLATGPVLFACQQFPELNDLIMRRFSLPG----- 235
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++++A+ + ++ + T Y A SY +A +R L S +++L+++ + L R
Sbjct: 236 DVERAWQYVLQSDGVRQTTYLAQSYCNQAVQEIRKLQPSPEREALIQLTEIVLTR 290
>gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
Length = 297
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ + V+ + + + + ++ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKNYLKERCAIVDEALERSLPGEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + ACA+E IHT +L+HDD+ RRG+ V+G ++L GD LL++A
Sbjct: 62 TPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEA 121
Query: 118 FCMVIETKS-----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ + + + + G++ + D+ ++
Sbjct: 122 FILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATVQYIHT 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A+++ +++ G + A+ YG +G+AFQ+ DD+LD G ++GK+ G
Sbjct: 182 HKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P ++ L D++ R
Sbjct: 242 SDEARGKATYPAVM--------------------------------------GLADSKRR 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A ++L + L E+ + + R +
Sbjct: 264 AQELVDLALEALSPF--GEKAEPLREIARYIVSRKS 297
>gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus
CTV-05]
gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus
CTV-05]
Length = 329
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 152/322 (47%), Gaps = 12/322 (3%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDN 63
L K +E+VN LI I + + D + + +GGK LRP L + +A + +
Sbjct: 12 LIRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQ 71
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ LA +IE +H A+L+HDD++DDS RRGK++ + +G T+V GD L + F +++
Sbjct: 72 IIQLASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILN 131
Query: 124 TKSQEALEALS-LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S++ + L GEL Q++ NL DYL +K KTA LF A E S
Sbjct: 132 AISEQDYMIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAEEGSH 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
QAL S+G NLGIAFQ+VDD+LDY G GK + + T L
Sbjct: 192 FGNGDEQTTQALASFGENLGIAFQIVDDILDYTG-----GKQLNKPTLEDLTTGVYSLPI 246
Query: 243 QRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + ++S ++++ I+ + + +T A Y +A +L
Sbjct: 247 LLALSKKELREQLVPLLEKKRQMSKNDIEQIQKILLNSSVIEETHALAEQYTNRALANLA 306
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
LP ++ L ++ + R
Sbjct: 307 QLPQTNATVLLKKMTRKLVNRT 328
>gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
ATCC 8290]
gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
ATCC 8290]
Length = 325
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ ++ +LK + + + + L+ SGGK LRP + D
Sbjct: 12 IQLKLIQLEPYLLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGENIPADKLRA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125
A AIE +H ATL+HDDV+D S LRRG +G + ++ GD+L + F ++ T
Sbjct: 72 GAAAIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTH 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L+ T+ GEL Q++ + D++++DY H I KTA LF + E S+++
Sbjct: 132 DATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTH 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q
Sbjct: 192 APRDIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTA 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++KK I+ ++ L A QK + LP+ +
Sbjct: 252 G---TQLAPLLGKKQDLKEADIKKIQEIVIKSGGLKQAHEIANQLTQKTLALINRLPEQN 308
Query: 306 WKKSLMEVVDFCLQR 320
KK L + + LQR
Sbjct: 309 SKKELRRLTNLLLQR 323
>gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 326
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 7/316 (2%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHV 65
+ ++ LI KR+ I V L +GGK LRP + D +
Sbjct: 12 QAKINQICALIDKRVAVRNPAIETAVVDLSTAGGKYLRPAFFYLFSEFGQEESVDEDKLL 71
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IET 124
+A ++E +H ATL+HDD++DDS LRRG+ + +G +V GD L + F ++
Sbjct: 72 KIATSLEILHMATLIHDDIIDDSPLRRGQETIQSQFGKDVAVYTGDLLFTVFFELILESM 131
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + + + GEL Q+ L N + T YLH I KTA LF A + +
Sbjct: 132 ANTPYMTINAKTMKKILMGELNQMHLQFNQEQTIRSYLHSISGKTAELFRLASKEGAYFG 191
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + G N+G+AFQ++DD+LDY + N K + ED G +LP++
Sbjct: 192 GADGKIVALAGRIGFNIGMAFQILDDILDYTADQNTFNKPVLEDLTTGVYSLPLLFT--- 248
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K +F I++ + + + + + A + +KA ++ LP
Sbjct: 249 LQKEPTSFKPLLDKGKAITLAERQLVSQKVIDLGGIEASRQLARRFTEKAIIDIKQLPKI 308
Query: 305 SWKKSLMEVVDFCLQR 320
+K L+++ D L+R
Sbjct: 309 KAQKQLLQLTDHLLKR 324
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + E V+ + + + E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + ACA+E IHT +L+HDD+ +D+ RRG V+G T++L GD LL++A
Sbjct: 62 ELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEA 121
Query: 118 FCMVIETKSQE---------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ A + + + G++ + D+ ++ K
Sbjct: 122 FILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ G AL Y +G+AFQ+ DDVLD G E+GK+ G D
Sbjct: 182 TGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P ++ L ++ RA
Sbjct: 242 QARGKATYP----------------------------------ALV----GLEASKRRAE 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L + + + L + + ++R +
Sbjct: 264 ELVQIALNALEPFDERA--EPLRAIASYIVKRKS 295
>gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
ghanaensis ATCC 14672]
gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 324
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 7/310 (2%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ +L+ + S ++ +F GK LRP+L + +A + + + A IE +
Sbjct: 16 LEAELLRWVGSGDSLLEVACLDALFPPGKLLRPILCMESAKAVGGTAEQVLAFAAGIECL 75
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV----GDFLLSQAFCMVIETKSQEAL 130
H A+L+HDD+VD +RRG+ + +G +++ ++ + A
Sbjct: 76 HVASLIHDDIVDQDPVRRGRASTAEQYGLAEALVAGDGLSMAGIAAMLSGGPAERVLHAA 135
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +G +R+ + +L L+VI KTA L AA + +++AG
Sbjct: 136 RVTVEALRHMCQGIMRETEIRGDLTCAVPTVLNVIHDKTAALTGAACQAGAILAGATPGQ 195
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
QAL YG LG+AFQ+ DD+L Y E GK+ D N +PTLPV+LA++ ++
Sbjct: 196 TQALHQYGEQLGMAFQIRDDLLPYTAEDQITGKSAISDVANLQPTLPVLLAYEVADTADR 255
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + V + ++ AL A S ++A+ +L LPDS L
Sbjct: 256 DRLTTAFRSETDPVTAHRDILAVLTRTGALTKAAQMASSCAEQARAALTGLPDS---TRL 312
Query: 311 MEVVDFCLQR 320
E+ R
Sbjct: 313 AELATSAADR 322
>gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
18228]
gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
18228]
Length = 327
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 9/328 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
MK L+ + M++++ I + S + D ++Y++ GGKRLRP+L L +
Sbjct: 1 MKQLDS--EELMKRIHAYIEQLSYSREPKGLYDPIEYVLALGGKRLRPVLMLLAYNLYRE 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ A IE H TLLHDD++D++ +RRGK W T++L GD +L ++
Sbjct: 59 DVESIFSQAAGIETYHNFTLLHDDLMDNADMRRGKPVVHKKWNENTAILSGDAMLILSYQ 118
Query: 120 MVIETKSQEALEALSLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
++ E ++ + + EG+ + DVT +Y+ +I+ KT+VL +A
Sbjct: 119 FMMNQCPPEHVQEVMEIFGRTALEVCEGQQWDMEFESRNDVTVGEYIEMIRLKTSVLLAA 178
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
AL++ +++ G ++ Q L +G+ +G+AFQL DD LD G GK IG D K T
Sbjct: 179 ALKIGAVLGGASSADAQKLYDFGIRMGLAFQLQDDYLDVYGNPAVFGKKIGGDILCNKKT 238
Query: 236 LPVILAFQRGTKREKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+I A ++ + + + E + I + + + Y Q+
Sbjct: 239 YMLITALEQAKGENREELLRWLNAAEFVPEEKIAAVTAIYNKVGIAGYCDAQIEKYYQEG 298
Query: 295 KDSLRCLPDSSWKKS-LMEVVDFCLQRL 321
L + +K L V ++R
Sbjct: 299 LQLLNEVDVDDARKENLRIFVHHLMERK 326
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +KV + K + +I ++Y +F+GGKRLRP+L L + ML
Sbjct: 4 RKLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKD 63
Query: 61 GD---NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +V+G ++L GD LL+
Sbjct: 64 QEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + E + + G++ ++ S +EE +
Sbjct: 124 LAAEVCMDWILRYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG ++ V ++ +G NLG+AFQ+ DD+LD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLEKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSQKAIDVIQKYDNSE---LLIELTNYLINR 297
>gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 324
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 12 MEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
E + I I + + + ++Y++ GGKR+RP LTL + +N +
Sbjct: 4 FENILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A +E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEH 123
Query: 127 QEALEA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + A + G+ + +DV+EE+Y+ +I+ KTAVL + AL+ +L+
Sbjct: 124 GHLKQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACALKTGALL 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A +
Sbjct: 184 GGASQKDADHLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALR 243
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K + +S ++ + +AF I E + TE + +Y + ++L L
Sbjct: 244 LANKEQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLNALQ 303
Query: 303 DSSWK-KSLMEVVDFCLQRLN 322
+ K L EV D + R +
Sbjct: 304 VAPEKLTILKEVCDHLMHRQS 324
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 81/322 (25%), Positives = 132/322 (40%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + I I + ++Y + +GGKRLRP+L LAT + + + AC++
Sbjct: 6 AEVEQALDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTACSL 65
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRG++ V+G ++L GD LLS AF V +
Sbjct: 66 EMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTNVP 125
Query: 130 LEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + V L ++ + D+TEE + KT L A +
Sbjct: 126 PQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACVVSG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG R+ L Y +G+AFQ+VDD+LD E+GK G+D K T P +
Sbjct: 186 AILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKATYPSLW 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L +++ RA +A+ L
Sbjct: 246 --------------------------------------GLEESKRRANQLIAEAQAELAP 267
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L+ + F R N
Sbjct: 268 F--GEAATPLVALAQFITSRSN 287
>gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152]
gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152]
Length = 323
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 10/321 (3%)
Query: 11 DMEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
D++ L + S + + + + V Y++ GGKR+RP+LTL A + + +
Sbjct: 2 DIKHYQEEFLSYLESKDWVQEPKNLYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKAL 61
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E H TL+HDD++DD+ LRRGK W T++L GD +L A+ K
Sbjct: 62 PAALAVEVFHNFTLVHDDIMDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYK 121
Query: 126 SQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L + T + +G+ + VT ++YL++I KT+VL +AAL++ ++
Sbjct: 122 PEVFQKLAKLFSKTALEVCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMGAI 181
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+A + + +G+NLG+AFQL DD LD G+ GK IG D K T +
Sbjct: 182 VAESDDKNADLIYDFGLNLGLAFQLQDDYLDTFGDPETFGKQIGGDIMENKKTFLYLKTL 241
Query: 243 QRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ K K K + + I + N Y QKA D+L +
Sbjct: 242 EVADKDTKKKLKYFYRKKLKDNGFKVVEVTRIYQMNDIPYLMSKEIEKYTQKAFDTLDQM 301
Query: 302 PDSSW-KKSLMEVVDFCLQRL 321
S K +L + + R
Sbjct: 302 DISEANKTNLRNFGTWLMNRT 322
>gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
Length = 322
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ + + + +++ I +GGK LR L L A E V AI
Sbjct: 16 LEQIQQRLEQVATLREPQVHTLIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAI 75
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H ATL+HDDV+D + +RRG GN+ ++ GDFL + F ++ E +
Sbjct: 76 EALHLATLVHDDVLDHADIRRGMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDL 135
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GE+ Q S L T YL I KTA LF+ A + I + +
Sbjct: 136 RTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSATQ 195
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +G LG+AFQ++DD+LDY + K ED NG TLP +
Sbjct: 196 KKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLP----LIYAYQTVP 251
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + N + I+R++ L A++Y +A +L LP S K +L
Sbjct: 252 DQLTPLTKTAEQIAANADEIAAIVRKHG-LPQAHQLAFTYTHRAIAALNPLPSSPTKAAL 310
Query: 311 MEVVDFCLQRLN 322
++ LQR +
Sbjct: 311 TKLTQQLLQRTH 322
>gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
Length = 402
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 27/337 (8%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------- 57
L ++M ++ + + ++V + +Y G GKR RPM+ L + L
Sbjct: 70 LVAEEMAQLGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSA 129
Query: 58 -------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ + H LA E IH A+LLHDDV+D + RRG + + GN+ +VL G
Sbjct: 130 AAAAATSDEKNWRHHKLAEITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAG 189
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
DFLL++A + ++ E + +S V L GE+ Q ++ + + YL KTA
Sbjct: 190 DFLLARAAFSLSTLQNDEVVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTFYKTA 249
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + + +++AG V YG +LG+A+QLVDD+LD+ G +GK D R
Sbjct: 250 SLIANSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGKPALSDLR 309
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G T PV+ A E + I+ ++ A ++ + + T+ A +
Sbjct: 310 EGIATAPVLYAL-----EEHPALQELIDRKFKDPGDVDSALKMVLASSGIRKTKELAREH 364
Query: 291 GQKAKDSLRCLPD------SSWKKSLMEVVDFCLQRL 321
KA D++ P S +++L E+ + + R
Sbjct: 365 ASKAADAVAAFPPTASDKASLCRRALTELTEQVITRS 401
>gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 308
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 148/320 (46%), Gaps = 19/320 (5%)
Query: 2 KMLEDLTLKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +++ V+ I + + + E + + Y I +GGKR+RP L + M++
Sbjct: 5 DDVFEWLQDEVKPTVDDRIQQWLE-EFEY-AERLWYPIDTGGKRIRPGLVFLISEMVDVP 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ + +A +E +H TL+HDD++D RR + +G +++ +GD + ++A
Sbjct: 63 REDALDIAAGVELLHNFTLVHDDIIDGDEYRRDEPTLWAKYGEGSAINLGDMMFAKAIL- 121
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + T+ GE + ++ D+T E+Y+ +++ KT L ++
Sbjct: 122 ---CFPPETRDLALDTVITVTNGEQMDIDFAERRDITVEEYMTMVRRKTGALLELCVDAP 178
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+A + LG AFQ+ DD+LD++ + + IG D R GK TL V+
Sbjct: 179 LALAETDLDLSGFTS-----LGPAFQIRDDLLDFQ--EGKGREKIGNDVRAGKRTLMVVH 231
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + + E++++ I++ ++ E R + ++A+ ++
Sbjct: 232 ADDDRVYDILDKPF-----DETTDEDVREVMQILQAEGSMEFAEQRMNALIEEARTAIAD 286
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
LPDS ++ L + F +R
Sbjct: 287 LPDSPGQEKLEALGRFITER 306
>gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
Length = 339
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVL 66
D+ L+ K + + + + +I SGGK LRP L +A + + V
Sbjct: 24 LQADLSASLQLMEKSLKLKNKEVEQAILSMIHSGGKLLRPAYQLLFSAYGSDKDREKAVA 83
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTA+L+HDD+VD + RR R +GN +V GD+L F ++ + S
Sbjct: 84 LAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYAS 143
Query: 127 QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ S + GEL Q+S +L VT EDYL I+ KTA LF+ + + + +G
Sbjct: 144 SMKSLQMNSRSMEKILAGELGQMSKRYDLSVTVEDYLENIRGKTAELFALSCFIGAYESG 203
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G +G+AFQ++DDVLDY + +GK + ED R G +LP+++A
Sbjct: 204 TSLRFANQAREIGEAIGLAFQIMDDVLDYSQDATALGKPVLEDVRQGVYSLPLLMA---L 260
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS- 304
+ ++ + + + I++E+ + + + A Y +KA +++ LP++
Sbjct: 261 KSDRQQLLPLLEKQDAMTDTDTHEVYRIVQESAGIEEAKKLAADYTKKALQAIQKLPETK 320
Query: 305 -SWKKSLMEVVDFCLQRLN 322
K L ++ L R N
Sbjct: 321 DETKTYLYQITAQILGRQN 339
>gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
Length = 354
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 69/340 (20%), Positives = 129/340 (37%), Gaps = 23/340 (6%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+++ + ++ + + + +++ GGKRLRP+ + +
Sbjct: 18 KIDESISRFFDRKEEETKDVLS---KRVIKIIRDYTEGGGKRLRPIFMILGYRLFSPEEK 74
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG------------ 110
+ +IE + L+HDDV+D S +RRGK + + +
Sbjct: 75 GIFDASISIELAQSYLLIHDDVIDKSDVRRGKPSMHIRLEDAFVAGCPQSRSTAEGLAIV 134
Query: 111 -------DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +A LS G+ + + D E D +
Sbjct: 135 AGDLAESYAHEALLRSGFYSENLVKADLELSKTIEMTGYGQFLDILSTTMDDFNEGDLIR 194
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KTA I AL+ YG LGIAFQL DD+L G+ +GK
Sbjct: 195 LHLWKTAKYTLEGPLAMGAILSGTEYDITALREYGRVLGIAFQLKDDILGLFGDEKTIGK 254
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
++ D GK TL +I A + G + + NF + + G ++ E ++ ++ + + +
Sbjct: 255 SVYSDVNEGKKTLLMIKAMEWGDRDDANFIRKMLRKGNVTNEEFERIKKLVMDTGSYDYS 314
Query: 284 EYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
K+K+ L + D+ KK L + D+ + R +
Sbjct: 315 INLMGKLVDKSKEYLAKVSGDNYVKKILDWLSDYLISRDH 354
>gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
Length = 352
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
D +++V +I + S +E + V ++L+ +GGKR RP+ + + +
Sbjct: 27 AFADAVQVSLDRVEDIIRAEVDSGIEAMSAVAEHLVKAGGKRFRPLFAVVAGKLGQPDQQ 86
Query: 63 -NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A A+E IH ATL HDDV+D++ +RRG AA + WGNQ ++L GD+L ++A ++
Sbjct: 87 GAVEVAAAALELIHLATLYHDDVMDEATMRRGVPAANVRWGNQVAILAGDYLFARACGLI 146
Query: 122 IETKSQEALEALSLVAC--TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ S+ A T ++ + E YL I KTA L A +
Sbjct: 147 AQLGSEATAIVAHTFAELVTGQFRDVVGAGADQGNAAKIEHYLATIHGKTASLIGACGRL 206
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L V+ L S G+ G+AFQ+ DD++D + GK G D R G TLPV+
Sbjct: 207 AGLAVRADQDVQDRLASIGVLTGMAFQIADDIIDIGSGSADSGKTPGTDLREGVMTLPVL 266
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + + +A ++ + A+ Y +A+ +
Sbjct: 267 YALEEEGPSRLKELVGL--GPLTDETLVAEALALLSASPAMDKARGVVQEYASRAEGEIA 324
Query: 300 CLPD-----SSWKKSLMEVVDFCLQRL 321
LPD ++++ VV ++R+
Sbjct: 325 QLPDLGPQTDEVREAMRAVVRAAVERV 351
>gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
Length = 326
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH 64
++ V L+++R+ + + I ++ GGK +RP L L A + +
Sbjct: 11 IQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKI 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET
Sbjct: 71 IKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIET 130
Query: 125 KS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + +GEL Q+ + + + T Y+ I KTA L S +
Sbjct: 131 MNGTSFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA +
Sbjct: 191 AGGDKKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLARE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +S + ++ E+ + A + A + +R LP+
Sbjct: 251 VNDEA---IAPYLEAPENLSRQECLDLAELVTESGGIAGALLVAGRLTELALNEIRKLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
S+ ++ L E L+R
Sbjct: 308 STNRQILEEATQILLER 324
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/335 (25%), Positives = 147/335 (43%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +K+ + K + +I ++Y +F+GGKRLRP+L L + ML
Sbjct: 4 RELEEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKD 63
Query: 61 GD---NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +V+G ++L GD LL+
Sbjct: 64 QEINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + + + + G++ ++ S +EE +
Sbjct: 124 LAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG ++ V L+ YG NLG+AFQ+ DDVLD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLEKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSQKAIDVIKKYDNSE---LLIELTNYLINR 297
>gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative
[Carnobacterium sp. AT7]
gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative
[Carnobacterium sp. AT7]
Length = 326
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
++ + L+ RI + I + ++ +GGK +RP TL + ++
Sbjct: 13 LQSELMQTIELMDSRIHLRNKSIEHALMDMMHTGGKLVRPAFTLLFSTFGEDHDPRRARA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
A AIE +H ATL+HDDV+DDS RRG+ + +G +V GD+L + +F + +
Sbjct: 73 FAAAIEILHMATLIHDDVIDDSPKRRGQSTIQSKYGKDVAVYAGDYLFTVSFKLLTDYSN 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + ++ + + GE+ Q+ L N +T +YL I KTA LF+ A +L G
Sbjct: 133 SMKQMQINTNGMERILMGEIDQMHLRYNQKITVRNYLTQISGKTAQLFALACYSGALEGG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G ++G+AFQ++DD+LDY GK + ED R G + P+I A +
Sbjct: 193 QSERFARNCYYIGSHIGMAFQIMDDILDYSQTAESFGKPVLEDVRQGIYSAPLIYAMR-- 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K F KI+ E+ K ++ + L + + A Y +KA + LPDS
Sbjct: 251 -KDHSAFQVLLEKKEKITNEDTTKVQQLVTDLGGLDEAQQLAGKYTRKALTRINQLPDSP 309
Query: 306 WKKSLMEVVDFCLQRL 321
KK + +V L R
Sbjct: 310 EKKIIRKVTMSLLDRT 325
>gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56]
Length = 326
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH 64
++ V L+++R+ + + I ++ GGK +RP L L A + +
Sbjct: 11 IQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET
Sbjct: 71 IKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIET 130
Query: 125 KS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + +GEL Q+ + + + T Y+ I KTA L S +
Sbjct: 131 MNGTSFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA +
Sbjct: 191 AGGDKKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLARE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +S + ++ E+ + A + A + +R LP+
Sbjct: 251 VNDEA---IAPYLEAPENLSRQECLDLAELVTESGGIAGALLVAGRLTELALNEIRKLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
S+ ++ L E L+R
Sbjct: 308 STNRQILEEATQILLER 324
>gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 353
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/291 (24%), Positives = 114/291 (39%), Gaps = 6/291 (2%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
L GGKR RP LT+ L +LA E IH ATL+ DDV D S +RRG+
Sbjct: 62 LFRRGGKRWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVEDGSLMRRGEPC 121
Query: 97 ARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
++G ++ G+ + A+ + A L T+ L Q
Sbjct: 122 IHRIYGIDIAINAGNAYYYIPAYLAAKKLPKNMATLFLEKYVETMTRLSLGQTMDIVWHR 181
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR----QALKSYGMNLGIAFQLVDDV 211
D + A + AL ++ + R + L +G +G AFQ+ DD
Sbjct: 182 GLVTDITEEHYLQMAAFKTGALSRFAVELAAIYAGRGDLLEELGRFGEAVGTAFQIQDDY 241
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
L+ G+ GK IG D GK TL + A + + + ++ + LK+A
Sbjct: 242 LNIFGDEARYGKEIGGDITEGKYTLMTVYALTHLSSEKAKRLRQILHSHTSDKQELKEAI 301
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQRL 321
++RE+ A A + L D+ K L ++ F ++R
Sbjct: 302 NLIRESGADKYAREVMRRSVHMAWSRVEPLLADTPAKTKLKKLATFLVERT 352
>gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299]
gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 91/331 (27%), Positives = 146/331 (44%), Gaps = 33/331 (9%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------------------- 57
+ + + S+V + +Y G GKR+RP + L A L
Sbjct: 1 MRQAVTSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTDLSSGGADALSRARAASV 60
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA E IH A+LLHDDV+D +A RRG A L GN+ ++L GDFLL++
Sbjct: 61 PDDTRRRQQRLAEITELIHVASLLHDDVLDSAATRRGLRALNLEVGNKLAILAGDFLLAR 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + ++ E +E LS V L GE+ Q++ ++ + Y KTA L + +
Sbjct: 121 ASVTLASLRNTEVIELLSRVLEHLVTGEVMQMTAKPERLMSFDHYFQKTYFKTASLIANS 180
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ L+ G YG +LG+AFQ DDVLD+ G + +GK D + G T
Sbjct: 181 AKAIVLLGGHDTETASHAYDYGRHLGLAFQFQDDVLDFVGSGSVLGKPTLGDLKEGIATA 240
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A E + I V +++ A +++ + + T+ A + A
Sbjct: 241 PVLFA-----AEEHPQLSALIERRFKHVGDVELAHDLVKRSDGIERTKELAREHSALAVK 295
Query: 297 SLRCLP--DSS----WKKSLMEVVDFCLQRL 321
++ LP D +K L E+ + R+
Sbjct: 296 AVEALPSIDCPHALRCRKGLKELAHMAVNRI 326
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
Length = 309
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + V + + + + E I + ++Y + +GGKRLRP+L L T ++
Sbjct: 18 DLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTR 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LLS AF
Sbjct: 78 EMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V L L V L ++ L DVT + + KT
Sbjct: 138 YVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTLKFIHIHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + + L Y N+G+AFQ++DD+LD E+GK G+D R
Sbjct: 198 ALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQR 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T P + L +++ +A +
Sbjct: 258 DQKATYPSLW--------------------------------------GLEESQKQAQAL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L S+ + L + F + R N
Sbjct: 280 IDDAIAQLSPYGQSA--QPLTAIAQFIVARKN 309
>gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
Length = 326
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 8/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNH 64
+ KVN I RI + D ++ + +GGK LRP L A + +
Sbjct: 12 INNALGKVNQTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTAAEQEKL 71
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIE 123
+ +A ++E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F + V
Sbjct: 72 IKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLVET 131
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L + + GEL Q+ +LD + DY + KTA +FS A E +
Sbjct: 132 MTGSPYLTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYF 191
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
K G N+GI+FQ++DD+LDY G+ K + ED G +LP++L
Sbjct: 192 GHGDRRTINLAKRIGQNIGISFQILDDILDYSGDERL-NKPVLEDLATGVYSLPLLLT-- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++++E+++K I+ + + + A + QKA+ + L D
Sbjct: 249 -LQNHRHELEPLLAKKRQMTIEDMEKVQKIVVTHGGVKKAQEIATKFTQKAQTEIDQLAD 307
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+K L V D L R+N
Sbjct: 308 KHTRKMLKLVADKLLTRVN 326
>gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ + V + K + +I ++Y +F+GGKRLRP+L L + M+
Sbjct: 4 RKLEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKD 63
Query: 61 GD---NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK + +V+G ++L GD LL+
Sbjct: 64 KEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + + E + + G++ ++ S +EE +
Sbjct: 124 LAAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG ++SV L+ YG NLG+AFQ+ DDVLD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L + +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLEEAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVKNYSQKAIDVIKKYDNSE---LLIELTNYLINR 297
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ VN + + + I + ++Y + +GGKR+RP+LT+A ++
Sbjct: 90 DFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGSE 149
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ LRRGK+ V+G T+VL GD LLS AF
Sbjct: 150 ELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAFE 209
Query: 120 MVIETKSQEALEALS----------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + + + + +A G++ ++ + V E + KT
Sbjct: 210 HIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHKT 269
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
AVL A+ ++I G + + Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 270 AVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEELGKTAGKDL 329
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P ++ L + A
Sbjct: 330 VSDKATYPKLM--------------------------------------GLEKAKEFADE 351
Query: 290 YGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
+AK+ L C + K + L+ + D+ R N
Sbjct: 352 LLDRAKEELSCF--NPAKAAPLLGLADYIALRQN 383
>gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 326
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
L + +V L+ + + S+ + + +L+ +GGKR RP+ TL A +
Sbjct: 11 DLSARVAAGLGRVEDLLERELISEFSFVTEAASHLMHAGGKRFRPLFTLVAAGVGPRPDA 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V+ + +E IH ATL HDDV+D++ +RRG +A W N ++L GDFL + A +V
Sbjct: 71 EEVVVASAVVELIHLATLYHDDVMDEAQIRRGAKSANARWDNSIAILTGDFLFAHASRLV 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ ++A+ ++ L G+ R+ + + +L V+ KTA L +
Sbjct: 131 A-SLGEDAVRIIAETFAELVTGQTRETVGPGPDEDPIDHHLRVLDEKTASLIDTCARYAG 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +G AL+ YG +G+AFQ+ DD+LD + GK G D R G TLP +
Sbjct: 190 IFSGAPEEHVLALRRYGRAVGVAFQISDDILDIC--STDSGKTPGTDLREGVRTLPALYT 247
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + + S +L +A ++ + + Y A L L
Sbjct: 248 --LGDPAADPRLRELVAGPIRSETDLAEAVTLLTASPGMATARQTLSGYADAAAAELALL 305
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
PDSS K +L +V + + R
Sbjct: 306 PDSSAKDALASLVRYVMDRT 325
>gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
Length = 385
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 97/378 (25%), Positives = 150/378 (39%), Gaps = 64/378 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----- 55
M + ++M+ + I + + S + V KY S GK +RPML L +
Sbjct: 12 MDPFQT-VAREMKFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALT 70
Query: 56 ------------------------MLEYRGDN----------------------HVLLAC 69
+ + D LA
Sbjct: 71 PRSSRGGMGIGSQSADISITNPTILADENPDRNPISNIRHDSAYTSEDSDILPSQRRLAE 130
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + E
Sbjct: 131 ITELIHTASLLHDDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRDPEV 190
Query: 130 LE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L + R + T YL K+A L S + +++
Sbjct: 191 TELLATVIANLVEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLISKSCRAAAI 250
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A+
Sbjct: 251 LGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGKPAGADLELGLATAPLLFAW 310
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + ++++A I+ + L T A Y KA D++ P
Sbjct: 311 KEDESLGR-----LVGRKFSQKGDVQRAREIVARSSGLEQTRALAQEYVDKAMDAISFFP 365
Query: 303 DSSWKKSLMEVVDFCLQR 320
+S K L+E+ ++R
Sbjct: 366 ESEAKTGLVEMCTKVMKR 383
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 85/330 (25%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + ++ ++L + + E + + VKY + GGKRLRP+L LA ++
Sbjct: 2 DLKAYLKERKALIDSVLLTYLPPEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCEIVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + ACAIE IHT +L+HDD+ LRRG + +G T++L GD LL++A
Sbjct: 62 NRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDALLNRA 121
Query: 118 FCMVIETKSQEALEALSLV-------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ + + + + + G+ L DV E+ L + K KT
Sbjct: 122 FEVLADWEFDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFIHKHKTG 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L +A++ + G AL+ YG +LG+AFQ++DDVLD G+ ++GKN+G D
Sbjct: 182 RLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEKLGKNVGSDLE 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T I + AY
Sbjct: 242 KGKTTFVTIF--------------------------------------GVEKARKMAYEE 263
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A ++L P ++ L + F ++R
Sbjct: 264 VERAVEALSIFPA-EKREPLEAIARFVVER 292
>gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
17393]
gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
17393]
Length = 324
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ +++ L + S ++ +V+ ++ GK +RPML L A +
Sbjct: 7 IKTPIAAELDDFKKLFDSSLTSSNFLLNEVISHIRQKNGKMMRPMLLLLMAKLYGRICPE 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VLVGD+LL+ + V +
Sbjct: 67 TLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIYNNKVAVLVGDYLLATSLVQVGK 126
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + +E +S + L+EGEL QLS +L +EE Y VI+ KTAVLF+A + +L
Sbjct: 127 THNYAIIEVVSRLGQNLSEGELLQLSNVSSLQFSEEVYFDVIRKKTAVLFAACTKSGALS 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
GV + + + +G +G+ FQ+ DD+ D + ++GK G D GK TLPV+ A
Sbjct: 187 VGVTDEQAEFARQFGEYIGLCFQIKDDIFD-YYDSKKIGKPTGNDMLEGKLTLPVLYALN 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + G + + + ++ + ++ +KA L LPD
Sbjct: 246 STKDKAAEEIAVKVKSGSATTDEIDYLIEFAKQQGGIEYAVQTMLAFKEKALSLLLTLPD 305
Query: 304 SSWKKSLMEVVDFCLQR 320
+ K +L+ +++ + R
Sbjct: 306 TDVKTALVAYLNYVVDR 322
>gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG]
Length = 312
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ + + + +++ I +GGK LR L L A E V AI
Sbjct: 6 LEQIQQRLEQVATLREPQVHTLIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAI 65
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H ATL+HDDV+D + +RRG GN+ ++ GDFL + F ++ E +
Sbjct: 66 EALHLATLVHDDVLDHADIRRGMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDL 125
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GE+ Q S L T YL I KTA LF+ A + I + +
Sbjct: 126 RTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQ 185
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +G LG+AFQ++DD+LDY + K ED NG TLP +
Sbjct: 186 KKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLP----LIYAYQTVP 241
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ K + N + I+R++ L A++Y +A +L LP S K +L
Sbjct: 242 DQLKPLTKTAEQIAANADEIAAIVRKHG-LPQAHQLAFTYTHRAITALNPLPSSPTKAAL 300
Query: 311 MEVVDFCLQRLN 322
++ LQR +
Sbjct: 301 TKLTQQLLQRTH 312
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ VN + + I D ++Y + +GGKR+RPML +A ++
Sbjct: 72 NFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQ 131
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 132 SAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGDALLAFAFE 191
Query: 120 MVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + A E + ++ L G++ L+ + + +V + + KTA
Sbjct: 192 FMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTA 251
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+++ +G+ Q+VDD+LD E+GK G+D
Sbjct: 252 ALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELGKTAGKDLA 311
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L A
Sbjct: 312 VDKTTYPKLL--------------------------------------GLDKAVEFAEKL 333
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L S L + D+ R N
Sbjct: 334 NEEAKAQLAGFDPSKA-APLTALADYIAHRQN 364
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 51/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + ++V + + + E I + ++Y + +GGKRLRP+L LA +
Sbjct: 7 NLDTYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGSV 66
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK V+G ++L GD LL+ AF
Sbjct: 67 EQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYAFE 126
Query: 120 MVIETKSQEALEALSLVACTLAEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + V + S+ ++ E ++ KT
Sbjct: 127 HIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGA 186
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++ ++AG + L Y ++G+AFQ+VDD+LD ++GK G+D
Sbjct: 187 LLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQAA 246
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + +A
Sbjct: 247 AKATYPSLL--------------------------------------GLEASRQKAEELI 268
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q AK++LR P S + L+ + DF +R +
Sbjct: 269 QSAKEALR--PYGSQAEPLLALADFITRRQH 297
>gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
Length = 324
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ K+N I + + + ++Y++ GGKR+RP L L + + ++ + AC
Sbjct: 8 LSKINDYIEALPFNRKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAPACG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ALRRG W T++L GD +L A+ +V + S +
Sbjct: 68 LETYHNYTLLHDDLMDNAALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQCDSSKLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L T + EG+ + DVTE++Y+ +I+ KT+VL + +++ +L+A
Sbjct: 128 PVMELFTETALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACGMKMGALLADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +G +G+AFQL DD LD G+ GK IG D K T +I AF +
Sbjct: 188 QQDADLLYKFGEQIGLAFQLQDDFLDVYGDSKVFGKTIGGDIVCNKKTYMLINAFNKADA 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSSW 306
++ + ++ + + + A + + + E R Y + K L + +
Sbjct: 248 SQRAELQRWVSQEQCNAQEKIAAITQLYNDMGIDKMAERRIEHYFECGKRYLDEVNVPAE 307
Query: 307 KKS-LMEVVDFCLQRL 321
+K L+ + R
Sbjct: 308 RKVNLINYASKMMNRK 323
>gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
Length = 322
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ + + + +++ I +GGK LR L L A E V AI
Sbjct: 16 LEQIQQRLEQVATLREPQVHTLIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAI 75
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H ATL+HDDV+D + +RRG GN+ ++ GDFL + F ++ E +
Sbjct: 76 EALHLATLVHDDVLDHADIRRGMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDL 135
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GE+ Q S L T YL I KTA LF+ A + I + +
Sbjct: 136 RTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQ 195
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +G LG+AFQ++DD+LDY + K ED NG TLP +
Sbjct: 196 KKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLP----LIYAYQTVP 251
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ K + N + I+R++ L A++Y +A +L LP S K +L
Sbjct: 252 DQLKPLTKTAEQIAANADEIAAIVRKHG-LPQAHQLAFTYTHRAIAALNPLPSSPTKAAL 310
Query: 311 MEVVDFCLQRLN 322
++ LQR +
Sbjct: 311 TKLTQQLLQRTH 322
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + VN + + + E I + ++Y + +GGKR+RP+L +A ++
Sbjct: 18 DFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGNE 77
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 78 SMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V + + LA+ ++ + + ++ + + KTA
Sbjct: 138 YVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTA 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 198 ALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLV 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L A
Sbjct: 258 ADKATYPKLL--------------------------------------GLEKAREFAEKL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + L L+ + +F R N
Sbjct: 280 KNEATEQLDEFDPEKA-APLLALAEFIAHRQN 310
>gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
Length = 324
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ K+N + + + + ++Y++ GGKR+RP L L + + ++ + AC
Sbjct: 8 LSKINAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAPACG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ALRRGK W T++L GD +L A+ +V + + +
Sbjct: 68 LETYHNYTLLHDDLMDNAALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQCDAAKLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L T + EG+ + DVTE++Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 128 PVMELFTETALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACAMKMGALLADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +G +G+AFQL DD LD G+ GK IG D + K T +I AF +
Sbjct: 188 QRDADLLYKFGEQIGLAFQLQDDFLDVYGDSKVFGKAIGGDIVSNKKTYMLINAFNKADA 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DSS 305
++ + ++ + + + A + + E R Y + K L + +
Sbjct: 248 AQRAELQHWVSQEQCNAQEKIAAITQLYNAMGIDKMAERRIEHYFECGKRYLDEVNVPAE 307
Query: 306 WKKSLMEVVDFCLQRL 321
K++L+ + R
Sbjct: 308 RKENLINYASKMMNRK 323
>gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2
[Paenibacillus sp. HGF5]
gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2
[Paenibacillus sp. HGF5]
Length = 334
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 26/337 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM------IPDVVKYLIFSGGKRLRPMLTLATALM 56
L + D+ + L+ + + SD ++ + V+ LI +GGKRLRP++ + +
Sbjct: 2 NLHNRIGVDLASFDRLLREVVSSDRDLPPSSVVLSSVM-DLINAGGKRLRPLMVVLGSRF 60
Query: 57 L-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A +E++H A+L+HDD++D S +RRG QT+V +G+++++
Sbjct: 61 GESGHEPAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIA 120
Query: 116 QAFCMVIETKSQEALEALSLVACT--------------LAEGELRQLSLSKNLDVTEEDY 161
+A + ++ L GE QL + +T E Y
Sbjct: 121 RAIEWAAGHPGGDPDGNSEDISEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQY 180
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + KTA+L + L+ + A + L +G +LG+AFQ+ DD+LD+ +
Sbjct: 181 LEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFTEPKEAI 240
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G D RNG TLPV+ + + ++ + + A+
Sbjct: 241 GKPAGADLRNGNITLPVLY----ALNDPALAPRIRQLGPHSAAADMDDVIHRIAASGAIG 296
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+E A Y + A+ + D ++ L ++ + L
Sbjct: 297 QSEELARFYAEHAQRMIVDFADHPAQRDLQALLHYFL 333
>gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22]
gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22]
Length = 324
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +GM++G+AFQL DD+LD G+ GK IG D K T +I A + +
Sbjct: 188 AEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALEHADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + + E ++ I + E + Y A +SL +
Sbjct: 248 KQQEELNRWLNAETFQPAEKIEAVTEIYNQLNIRNVCENKMREYYTLAMESLAAVAVAED 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 82/334 (24%), Positives = 136/334 (40%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ + + + + S + I + + Y + +GGKR+RP+L +A M
Sbjct: 46 SLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGG 105
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + A A+E IHT +L+HDD+ LRRGK +V+G ++L GD LLS +
Sbjct: 106 SQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTS 165
Query: 118 FCMVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSK 168
F V + E + V L + ++ L T +D + K
Sbjct: 166 FEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHK 225
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L A+ +++ G A + + MN+G+AFQ+ DD+LD ++GK G+D
Sbjct: 226 TATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGKD 285
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L +++ A
Sbjct: 286 EATDKTTYPKLL--------------------------------------GLEESKAYAR 307
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK+SL D + L+ + DF + R N
Sbjct: 308 QLIDEAKESLAPFGDRAA--PLLAIADFIIDRKN 339
>gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate
synthase [Natronomonas pharaonis DSM 2160]
Length = 353
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/305 (22%), Positives = 106/305 (34%), Gaps = 16/305 (5%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ D V L+ GGKR R +L L L+ D ++ A E +H T++ DDV D +
Sbjct: 49 LSDPVWELLDRGGKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVEDGAT 108
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
RRG A G ++ G+ + ++ + + L R
Sbjct: 109 HRRGDPALHHTHGTDIALNAGNAMYFLPLKIITHNPADLDADTRLAAYEMLMYELNRTHL 168
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS--------YGMNL 201
I + A + + Y +
Sbjct: 169 GQGMDIHWHNQQEIDITEDQYLEMCACKTGCLARIVARLAAIVTNNEAAESDLAAYAEEM 228
Query: 202 GIAFQLVDDVLDYRG---EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
IAFQ+ DDVLD E + GK +G D R GK TL I A + + +S +
Sbjct: 229 AIAFQIADDVLDVEYALEEGGDFGKGVGNDIREGKKTLLTIHAARNASPEAAARLESILW 288
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---PDSSWKKSLMEVVD 315
+ + E + +A I+ ++ A AK L L PD K L D
Sbjct: 289 AAENTDEEVAEAIEILESTGSVEYARETAEELSTSAKAHLDDLGLQPDPEAK--LRGFAD 346
Query: 316 FCLQR 320
F ++R
Sbjct: 347 FVVER 351
>gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
Length = 324
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++KVN I + + ++Y++ GGKR+RP L L + + + + ACA
Sbjct: 8 LDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++DD+ LRRG+ + W T++L GD +L AF + + +
Sbjct: 68 LETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLR 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ A + EG+ + DVTE +Y+ +I+ KT+VL + A+++ +++A
Sbjct: 128 DVLRLFTVTALEIGEGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLACAMKIGAILADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I A +
Sbjct: 188 SEDMDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANA 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
R++ K + E + + + Y +A L + S
Sbjct: 248 RQRKELEKWIGCESFHRNEKVAAVTALYNKIGVDRMAIDCINHYFDEANKYLAAVNVSDE 307
Query: 307 KK-SLMEVVDFCLQRL 321
+K LM L R
Sbjct: 308 RKTELMAYAQKLLHRQ 323
>gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 385
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 96/378 (25%), Positives = 151/378 (39%), Gaps = 64/378 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----- 55
M + ++M+ + I + + S + V KY S GK +RPML L +
Sbjct: 12 MDPFQT-VAREMKFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALT 70
Query: 56 ------------------------MLEYRGD----------------------NHVLLAC 69
+ + D + LA
Sbjct: 71 PRSSRGGMGIGSQSADISITNPTILADENPDCNPISSIRHDSAYTSEDSDILPSQRRLAE 130
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + E
Sbjct: 131 ITELIHTASLLHDDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRDPEV 190
Query: 130 LE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L + R + T YL K+A L S + +++
Sbjct: 191 TELLATVIANLVEGEFMQLKNTARDDKNPAWTEDTVSYYLQKTYLKSASLISKSCRAAAI 250
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ A+
Sbjct: 251 LGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGKPAGADLELGLATAPLLFAW 310
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + ++++A I+ + L T A Y KA +++ P
Sbjct: 311 KEDESLGR-----LVGRKFSQQGDVQRAREIVARSSGLEQTRALAQEYVDKAIEAISFFP 365
Query: 303 DSSWKKSLMEVVDFCLQR 320
+S K L+E+ ++R
Sbjct: 366 ESEAKTGLVEMCTKVMKR 383
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 51/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + ++V + + + E I + ++Y + +GGKRLRP+L LA +
Sbjct: 7 NLKAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGTV 66
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK V+G ++L GD LL+ AF
Sbjct: 67 EQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFE 126
Query: 120 MVIETKSQEALEALSLVACTLAEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + V + S+ ++ E ++ KT
Sbjct: 127 HIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGA 186
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++ ++AG + L Y ++G+AFQ+VDD+LD ++GK G+D
Sbjct: 187 LLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQAA 246
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + +A
Sbjct: 247 AKATYPSLL--------------------------------------GLEASRQKAEELI 268
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q AK++LR P + L+ + DF +R +
Sbjct: 269 QSAKETLR--PYGPRAEPLLALADFITRRQH 297
>gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289]
gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289]
Length = 324
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++KVN I + + ++Y++ GGKR+RP L L + + + + ACA
Sbjct: 8 LDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++DD+ LRRG+ + W T++L GD +L AF + + +
Sbjct: 68 LETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLR 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ A + EG+ + DVTE +Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 128 DVLRLFTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLACAVKLGALLADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I A +
Sbjct: 188 AGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANA 247
Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
R++ + I E + + + Y +A L + +
Sbjct: 248 RQRKELEKWIGCRSFDRDEKVAAVTALYSKIGVDKMAIDCINRYFDEANKYLSAVNLPGA 307
Query: 306 WKKSLMEVVDFCLQRL 321
K L L R
Sbjct: 308 RKTELTAYAQKLLHRQ 323
>gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin]
gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain
Friedlin]
Length = 359
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 144/339 (42%), Gaps = 30/339 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-------- 56
L +++ + I + ++ E++ KY++ +GGK +RP L + A
Sbjct: 29 ALVNREVTAIKEHIQSLVTNTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSA 88
Query: 57 ---------LEYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
L+ + LA E IHTA+LLHDDV+D++ RRG+ A V+
Sbjct: 89 HLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLLHDDVIDNTDTRRGRPALHKVYDA 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GD++L++A + + + ++ L GEL Q+ ++ E+
Sbjct: 149 KRAVLAGDYMLARASFYIATLQVPRIVILMTTALEELTSGELMQMDGCFDIPRYEQKSFC 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S A ++ ++ +G +LGIAFQ++DD LD G+ +GK
Sbjct: 209 KTASLIANSLASTAVLAGPGNEALEQ---TAFDFGKHLGIAFQILDDCLDITGDEKMLGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G T+PV+L +R K + + + + + A+ +
Sbjct: 266 PKLVDMKEGIATIPVLLVARRNAKVAEMVC-----RRFAEPGDAEFCLEAVEKEGAVAEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+RA + + +SL L S + +L + + R +
Sbjct: 321 MHRADEHCRLGLESLHKLHHSPARDALESALSMVMNRKS 359
>gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
Length = 300
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 88/303 (29%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTA 77
+ + + D + I V +I SGGK LRP L + E LA +IE +HTA
Sbjct: 1 MEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTA 60
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLV 136
TL+HDD+VD++ RRG R +GN T+V GD+L F ++ + S S
Sbjct: 61 TLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRS 120
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ GEL Q+ N +VT + YL I KTA LF+ + V + +G +
Sbjct: 121 MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G N+G+AFQ++DD+LDY + +GK + ED R G +LP +
Sbjct: 181 IGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLP---LIYALEANREVLLPLL 237
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVV 314
+ ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+
Sbjct: 238 MKKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEIT 297
Query: 315 DFC 317
Sbjct: 298 QTI 300
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 130/332 (39%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + V ++ + + + + + + + Y + +GGKRLRP+LTL ++
Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + A AIE IHT +L+HDD+ D+ LRRG+ V+G +L GD LL+ A
Sbjct: 62 NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F +++ + L A + V E I+ +
Sbjct: 122 FEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNK 181
Query: 178 EVSSLIAG---------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ ++ + + + Y N+G++FQ+VDD+LD G+ ++GK +G D
Sbjct: 182 TAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T P +L L ++ A+
Sbjct: 242 IENHKSTYPSLL--------------------------------------GLDKSKEIAH 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +AK S+ L S L + ++ + R
Sbjct: 264 NLIDEAKKSIEKL--SDDVDFLKGLAEYIIDR 293
>gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis KF147]
gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis KF147]
Length = 319
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 9/314 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ +V L+ + + + + +GGK LRP L + + + L
Sbjct: 14 LEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTVLSENERLAL 73
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A ++E +H ATL+HDDV+D + RRG +G + +V GD+L F ++ E +
Sbjct: 74 AASVEMMHIATLVHDDVIDHADTRRGVATLSAKYGPEIAVYAGDYLFIAVFRLMSEHSLE 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ + G D S A + +
Sbjct: 134 LSNLTKNIGSIERLLGGELGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKN 193
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
N++ + GMN+GI+FQ++DD LDY +GK + ED + G + PV+ A Q
Sbjct: 194 NTLTKRAYKIGMNIGISFQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQENNA 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I E + + ++ + AL T+ A SY A + + LP +
Sbjct: 254 LV---------SELIKNEKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGKNR 304
Query: 308 KSLMEVVDFCLQRL 321
+ + E+ L+R
Sbjct: 305 ELIAEITRKLLERT 318
>gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 309
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V + + I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 18 SLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSL 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 78 EMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V + V L ++ L D++ E + KT
Sbjct: 138 YVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + L Y N+G+AFQ++DDVLD E+GK G+D +
Sbjct: 198 ALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQ 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + + +A
Sbjct: 258 AQKATYPSLW--------------------------------------GIEGSRQQAQHL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + L + L + ++ + R N
Sbjct: 280 IDSAINELSSYD--EAAEPLRAIAEYIVNRKN 309
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
E+ + VN + + I + I D ++Y + +GGKR+RP+L +A ++
Sbjct: 82 FEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGDEA 141
Query: 63 NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ ACA+E IHT +L+HDD +D+ LRRGK ++G +T++L GD LLS +F
Sbjct: 142 TAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSFEH 201
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVL 172
V + + + + L + ++ + + + + KTA L
Sbjct: 202 VARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIHKTAKL 261
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ +++ G + + ++ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 262 LEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLITD 321
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P ++ + + A
Sbjct: 322 KATYPKLM--------------------------------------GIDEARKLAAKLVD 343
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L DS+ L ++ R N
Sbjct: 344 QANQELAYF-DSAKAAPLYHFANYIASRQN 372
>gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
Length = 324
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 10/319 (3%)
Query: 13 EKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+K+ +I I + + + + + +KY++ GGKR+RP+L L M + ++ +
Sbjct: 5 DKIFSIINNYIATLAYDREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPESILNQ 64
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AC +E H TLLHDD++D + LRRG W T++L GD +L AF +
Sbjct: 65 ACGLETYHNYTLLHDDLMDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFERITRGNPS 124
Query: 128 EAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ ++ A + EG+ + DVTE +Y+ +I+ KT+VL + AL++ +++
Sbjct: 125 CLKALLDLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACALKMGAMLG 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
L +G +G+AFQL DD LD G+ GK IG D + K T +I AF +
Sbjct: 185 NASEKDANNLYLFGEKIGLAFQLQDDYLDVYGDPYIFGKQIGGDIISNKKTYMLINAFNK 244
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPD 303
T+++K IN KA + + + Y +++K L +
Sbjct: 245 ATQKQKEELNYWINKKDFDANKKIKAITKLYTEIGIDKLAIDKINRYFEESKIYLSKVSV 304
Query: 304 SS-WKKSLMEVVDFCLQRL 321
+ K+ L+ + R
Sbjct: 305 NDKNKQELINFAQSLMHRK 323
>gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + I +I + ++Y + +GGKR+RPML LA ++ +N + ACA+E
Sbjct: 89 VNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEM 148
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK ++G +VL GD LL+ AF ++ + +
Sbjct: 149 IHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPS 208
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ LA+ ++ + + N V+ E + KTA L +++ + ++
Sbjct: 209 RIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAI 268
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G N + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 269 LGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLL-- 326
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + A ++AK L
Sbjct: 327 ------------------------------------GLEKAKEFAAELNREAKQQLEGF- 349
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS L+ + D+ R N
Sbjct: 350 DSRKAAPLIALADYIAYRDN 369
>gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 424
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/332 (17%), Positives = 127/332 (38%), Gaps = 18/332 (5%)
Query: 8 TLKDMEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
T D+ ++ +L + S + I + V L+ GGKR RP+L + A +
Sbjct: 92 TEADLAILSDNLLYTKNQNDLVSLTKAISEPVWDLLDRGGKRWRPILCIILAEAFNLGQE 151
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-- 120
+ +A E +H TL+ DD+ D+S +RR K L++G S+ G+ + +
Sbjct: 152 DVKEIASLCEIVHNGTLVVDDIEDNSTVRRDKKCVHLIYGVDISINAGNMMYFAPLHILL 211
Query: 121 ----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL---- 172
+ + + + L G+ + + +
Sbjct: 212 KSNKYTDQQKLRFAKIYAEEMTQLHLGQGWDILWHNTDKLEGRIPTEQQYLQMTAHKTGV 271
Query: 173 -FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + + + +G+AFQ+ DD+L+ GE + K + +
Sbjct: 272 LARLSSRLICAAVNTSVEDEMTISRFSERIGVAFQIQDDILNLEGEEYKKTKGQSGEDIH 331
Query: 232 G-KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K +L V+ + Q +K+ ++ + + + +A ++++ ++ + A
Sbjct: 332 EGKMSLIVLHSLQNSQPEDKDRLFKILSSHTDNQDEIDEAIALVKKTDSISYSRKVAQEL 391
Query: 291 GQKAKDSLRC-LPDSSWKKSLMEVVDFCLQRL 321
Q A + + LP S K+ L + ++ + R
Sbjct: 392 VQTAWNDIENLLPASRSKQLLKLLAEYNIGRK 423
>gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
Length = 328
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 7/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66
D+ + L+ + + + + + +I SGGK LRP L + E V
Sbjct: 13 LQNDLSESLQLMEQSLKLKNKAVEQAILAMIHSGGKMLRPAYQLLFSEFGEEKDSQKAVA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK- 125
L+ AIE +HTA+L+HDD+VD + RR R +GN +V GD+L F ++ +
Sbjct: 73 LSAAIEMLHTASLIHDDIVDQADTRRSLPTIRAQFGNDVAVYAGDYLFVCCFKLLADYAG 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++L+ S T+ GEL Q+S +L+VT EDYL I KTA LF+ + + + +G
Sbjct: 133 SLKSLQINSRSMETILAGELGQMSKRYDLNVTIEDYLENISGKTAELFALSCFIGAYESG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ K+ G ++G+AFQ++DD+LDY + +GK + ED + G +LP++LA
Sbjct: 193 ASLRLANQAKTIGQSIGLAFQIMDDILDYSQSESALGKPVLEDVKQGVYSLPLLLA---L 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-- 303
K +++ + ++ + I+ + ++ + A Y +KA ++ LPD
Sbjct: 250 KKERAVLTPLLEKKAEMTDQEAQQVYQIVHNSHSVEEAHQLAARYTKKALQGIKKLPDPG 309
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ K L ++ + L R N
Sbjct: 310 KNTKDYLYQITNQILARTN 328
>gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
Length = 324
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++KVN I + + ++Y++ GGKR+RP L L + + + + ACA
Sbjct: 8 LDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++DD+ LRRG+ + W T++L GD +L AF + + +
Sbjct: 68 LETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLR 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ ++ A + EG+ + DVTE +Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 128 DVLRLFTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLACAVKLGALLADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I A +
Sbjct: 188 AGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANA 247
Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
R++ + I E + + + Y +A L + +
Sbjct: 248 RQRKELEKWIGCRSFDRDEKVAAVTALYSKIGVDKMAIDCINRYFDEANKYLAAVNLPGA 307
Query: 306 WKKSLMEVVDFCLQRL 321
K L L R
Sbjct: 308 RKTELTAYAQKLLHRQ 323
>gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
Length = 325
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 7/316 (2%)
Query: 12 MEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ +N I + + + +KY + GGKR+RPML L T + + + + +A A
Sbjct: 8 LQILNQYIDSIVFDRKPASLYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPVASA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIETKSQ 127
+E H TLLHDD++D++ LRRG+ W T++L GD +L A+ K +
Sbjct: 68 LETYHNYTLLHDDLMDNALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECNVDKLK 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E L+ ++ A + EG+ + DV E +Y+ +I+ KT+VL + ++++ +++AG
Sbjct: 128 EVLDLFTITALEIGEGQQYDMDFELRNDVAESEYIEMIRLKTSVLLACSMKIGAILAGAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I A R +
Sbjct: 188 SEDANNLYRFGELIGLAFQLQDDYLDVYGDSKVFGKAIGGDIASNKKTFMLINALSRANE 247
Query: 248 REKNFWKSTINDGKISVE--NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS- 304
++ + I + + E +K + V + + Y +++K L +P S
Sbjct: 248 TQRKELEMWIANTNVKDEQKKIKAVTALYNAIGIDVLAQEKINFYFKESKKYLAAVPLSD 307
Query: 305 SWKKSLMEVVDFCLQR 320
KK L + V ++R
Sbjct: 308 EIKKELTDYVARMMKR 323
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +KV + + +I ++Y +F+GGKRLRP+L L + M
Sbjct: 4 RKLEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSED 63
Query: 61 GD---NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +++G ++L GD LL+
Sbjct: 64 KEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + + + G++ ++ S EE +
Sbjct: 124 LAAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+AG ++ V L+ YG NLG+AFQ+ DDVLD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKSTFVTFY--------------------------------------GLEKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSQKAIDVIKKYDNSE---LLIELTNYLINR 297
>gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
Length = 321
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ ++ + + + + + + Y + GGKR+RP LTL + + + A +
Sbjct: 5 LAQIENALSQQAYPTRPAGLYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPAALS 64
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIETKSQ 127
+E H TLLHDD++D + LRRG+ W T++L GD +L AF +
Sbjct: 65 VETYHNHTLLHDDLMDGADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGGYPNAA 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E L+ L+ A + EG+ ++ + DVTE +Y+ +I+ KT+VL + AL++ +L+AG
Sbjct: 125 ELLQLLARTAREVCEGQQYDMNFEQRNDVTEAEYIEMIRLKTSVLLACALKMGALVAGAP 184
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +G +G+AFQL DD LD G+ GK IG D + K T +I A + +
Sbjct: 185 ADQADLLYHFGEQIGLAFQLQDDYLDCYGDPAVFGKQIGGDIASAKKTYLLINALESADE 244
Query: 248 REKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ ++D + E L I + R +Y + A++ L +
Sbjct: 245 KQRADLNRLLSDEAMPRAEKLAAVIQIYNALDIPARCQARISAYYEAAREVFNQLNVAPE 304
Query: 307 -KKSLMEVVDFCLQR 320
K+ L + + L R
Sbjct: 305 RKQPLWDFAEKMLHR 319
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 139/336 (41%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + + V+ + + + + E + ++Y IF+GGKR+RP+L LA +
Sbjct: 2 DLKVYLKEKIALVDAALEQYLPKEEERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ D + ACA+E IHT +L+HDD+ RRG+ V+G ++L GD LL++A
Sbjct: 62 QIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEA 121
Query: 118 FCMVIETK-----------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ + + A + G++ + D+ ++
Sbjct: 122 FKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYIHA 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A++ +L+ G + A++ YG G+AFQ+ DD+LD G E+GK+ G
Sbjct: 182 HKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P ++ L +
Sbjct: 242 SDEARGKATYPAVM--------------------------------------GLAAAKQE 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + +A +L L + + L + + ++R N
Sbjct: 264 AQAMMDEAMLALEPL--GAAAEPLRAIARYIVERKN 297
>gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 319
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 8 TLKD--MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
LKD + K + + I D++++ ++ Y I SGGKR+RP+L +L Y G + +
Sbjct: 5 VLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGKHWL 64
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ E IH A+LLHDDVVD++ RRG + +GN+T++L GD+LL+ +
Sbjct: 65 DVGAIAELIHAASLLHDDVVDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDHLNGLG 124
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
E +E + V L+ EL Q+ KN +T + Y +I KTA LF+ + +++
Sbjct: 125 YPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKIIYGKTASLFAVVCVSAGILSD 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
++ L+ +G++LG FQ DD +DY ++ GK +DF NG T P++L R
Sbjct: 185 KNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASKSGKIPLKDFYNGLYTHPILLLLDRA 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +K S + S + ++ + + + L +S+
Sbjct: 245 DRNDKKLIHSLFAKSERSQGDGIVILSLLSRYQIRERMDAEFQTIADNLLKFLNGFSEST 304
Query: 306 WKKSLME 312
+ L E
Sbjct: 305 IRNLLKE 311
>gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
XB1A]
Length = 324
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +GM++G+AFQL DD+LD G+ GK IG D K T +I A + +
Sbjct: 188 AEDSENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALEHADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + + E ++ I + E + Y A +SL +
Sbjct: 248 KQQEELNRWLNAETFQPAEKIEAVTEIYNQLNIRNVCENKMREYYTLAMESLAAVAVAED 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 147/332 (44%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML+++ + + V ++K + + + + + ++Y + +GGKRLRP+L +A A +
Sbjct: 7 MLKEIWKERQQLVEKQLVKELEKEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGA 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+G +++ ACA+E IHT +L+HDD+ +D+ RRGK+ V+G+ +VL GD LL+ A
Sbjct: 67 KGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLA 126
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTA 170
F ++ + + L V + + S+ ++ E + KT
Sbjct: 127 FEVIGRQQHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTG 186
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AAL +++AG AL +Y G+AFQ+ DD+LD G+ +GK +G D R
Sbjct: 187 ALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLR 246
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T + +L + + A
Sbjct: 247 NEKSTYVTLT--------------------------------------SLEEAQRLAKET 268
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L L ++V + L+R N
Sbjct: 269 VDAAVAALDGF--GPEADFLRQLVRYMLERKN 298
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 131/332 (39%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V + + I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 18 SLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSL 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 78 EMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V + V L ++ L + D++ E + KT
Sbjct: 138 YVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + L Y N+G+AFQ++DDVLD E+GK G+D +
Sbjct: 198 ALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQ 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + ++ +A
Sbjct: 258 AQKATYPSLW--------------------------------------GIEESRQQAQQL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L + L + ++ + R N
Sbjct: 280 IDSAIGELSGYD--EAAEPLRAIAEYIVNRKN 309
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 88/332 (26%), Positives = 135/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + V+ + + I I ++Y + +GGKRLRP+L LAT M
Sbjct: 29 DLVSYLKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCEMTGGTV 88
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 89 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFE 148
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V E L V L ++ L DV+ E + KT
Sbjct: 149 YVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFIHAHKTG 208
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + + G + V Q L Y N+G+AFQ++DDVLD E+GK G+D R
Sbjct: 209 ALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELGKTAGKDLR 268
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + + +A
Sbjct: 269 AQKVTYPSLW--------------------------------------GIEASRCQAKQL 290
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK L + + LM + DF R +
Sbjct: 291 VDEAKAELATFGERAI--PLMAIADFVTARTH 320
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/329 (22%), Positives = 131/329 (39%), Gaps = 57/329 (17%)
Query: 12 MEKVNFLILKRICSDVE-----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++ VN I + + + V + + ++Y + +GGKR+RP L LA ++ + +
Sbjct: 56 IKGVNAKIERALDASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMP 115
Query: 67 LACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
ACA+E IHT +L+HDD+ RRGK V+G + ++L GD LLS AF +
Sbjct: 116 TACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRE 175
Query: 125 KS-----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + + + + +VT + ++ KT L
Sbjct: 176 TKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAHKTGALL 235
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ +++ G L+ Y N+G+AFQ+VDD+LD E+GK G+D GK
Sbjct: 236 EVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEELGKTAGKDVAVGK 295
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + +++ A K
Sbjct: 296 TTYPSLV--------------------------------------GMEESKRIAADLISK 317
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK L + L+ + D+ R N
Sbjct: 318 AKAELEGFDPVKVR-PLIGLADYIQNRKN 345
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/329 (22%), Positives = 130/329 (39%), Gaps = 57/329 (17%)
Query: 12 MEKVNFLILKRICSDVE-----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++ VN I + + + V + + ++Y + +GGKR+RP L LA ++ + +
Sbjct: 23 IKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGTMEVAMP 82
Query: 67 LACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
ACA+E IHT +L+HDD+ RRGK V+G + ++L GD LLS AF +
Sbjct: 83 TACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRE 142
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV-----------IKSKTAVLF 173
+ + + V + + + + + + KT L
Sbjct: 143 TKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYIHAHKTGALL 202
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ +++ G L+ Y N+G+AFQ+VDD+LD E+GK G+D GK
Sbjct: 203 EVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELGKTAGKDMAVGK 262
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + +++ A K
Sbjct: 263 STYPSLV--------------------------------------GMEESKRIAADLISK 284
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK L K L+ + D+ R N
Sbjct: 285 AKQELEGFDPVKVK-PLIGLADYIQNRKN 312
>gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
Length = 358
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 152/316 (48%), Gaps = 3/316 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D+ V L++ R S +I + + + SGGKRLR + L A + Y+ +
Sbjct: 44 RANLTADLRAVEDLLIARSQSRSSLITEAGVHTVRSGGKRLRAAMALLAAQLGTYQLSHV 103
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A + E IH A+L+HDD+VD +A RRG+V W N +++VGD+ + A + +
Sbjct: 104 IHAAASAELIHAASLVHDDLVDQAARRRGRVTVHARWDNDVALMVGDYFFALASAEMSLS 163
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + + EGEL + +++ + Y + +KTAVLF AA +
Sbjct: 164 PDPRIITFYAQAVQVIVEGELSPVMVAEPAETARRQYFYKTGAKTAVLFEAACKAGMAAG 223
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + AL YG ++G+AFQ+VDDVLD+ G + +GK G D R G TLP+I A +R
Sbjct: 224 GGDEAQIAALAGYGFDVGVAFQIVDDVLDFIGNESTLGKPAGNDLRQGTITLPLIYALER 283
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
++ + ++ A + E A Y +A + L PDS
Sbjct: 284 TGSP---RLRALVEQHLTDDATIEAAIREVLEAGGAAAAMDEARRYVDQAINHLNIFPDS 340
Query: 305 SWKKSLMEVVDFCLQR 320
+++L+ + F L+R
Sbjct: 341 LARRTLITLAQFVLER 356
>gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14]
gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14]
Length = 324
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 7 LTLKD-MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
LT + ++KVN + K + + + ++Y++ GGKR+RP L L + + ++
Sbjct: 2 LTANEILDKVNDYLNKLPYDRKPVSLYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESI 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
++ ACA+E H TLLHDD++D + LRRGK W T++L GD +L A+ ++
Sbjct: 62 LMSACALETYHNYTLLHDDLMDQADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNC 121
Query: 125 KSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
K + + L L T + EG+ + +DV EE+Y+ +I+ KT+VL + A+++ +
Sbjct: 122 KPEYQGKVLKLFTETALEIGEGQQYDMEFETRMDVVEEEYIEMIRLKTSVLLACAMKIGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + L +G +G+AFQL DD LD G+ GK++G D + K T +I A
Sbjct: 182 ILADASDEDADNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKSVGGDIVSNKKTYMLINA 241
Query: 242 FQRGTKRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
F + R+ K + + E ++ + E + Y +++K L
Sbjct: 242 FHKADNRQLKELTRWVEAKEFVRQEKVEAVTQLYNEMGIDKLALEKISYYFEQSKKFLSA 301
Query: 301 LPDSSWKKS-LMEVVDFCLQRL 321
+ + +K LM+ + + R
Sbjct: 302 VHVAEDRKMELMKFAELMMHRK 323
>gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
16047]
gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
16047]
Length = 326
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 3/301 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++E+VN I K I + + + + + +GGK LRP L L A + + +
Sbjct: 12 LIANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVGKTNERTIK 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +H ATL+HDD++DDS RRG V+ + +G +V GD L + F ++++
Sbjct: 72 LASSIEILHMATLIHDDIIDDSDERRGNVSIQAAFGKDVAVYTGDLLFTDFFDLMLDAID 131
Query: 127 QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + GEL Q++ NL T +DYL +K KTA LF A E + AG
Sbjct: 132 EHEYLVRNAQTMRKILNGELGQMAERFNLKQTLDDYLRDVKGKTAALFRLAAEEGAHFAG 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ AL +G NLGIAFQ+VDD+LD + +L
Sbjct: 192 ANSMQSDALAQFGENLGIAFQMVDDILD--YSGGIQLNKPTLEDLATGVYSLPLLLALNQ 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++++ +++K I+ + + D+ A Y Q+A D L+ +
Sbjct: 250 PALHDELLSLLKKKRQMTLADMQKVQNILLNSSVINDSRKLAQEYAQRADDCLKIFKPNP 309
Query: 306 W 306
Sbjct: 310 A 310
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 56/316 (17%)
Query: 23 ICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
+ S V + I + ++Y + +GGKRLRP+L LAT +L + + ACA E HT
Sbjct: 33 LDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTM 92
Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF + + +
Sbjct: 93 SLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQ 152
Query: 136 VACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
V L ++ L DV+EE + KT L A + +++AG
Sbjct: 153 VVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGA 212
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + Q L Y N+G+AFQ+VDD+LD E+GK G+D + GK T P +
Sbjct: 213 EPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGKTAGKDVQAGKVTYPSLW------ 266
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ +++ RA + AK L
Sbjct: 267 --------------------------------GIEESKRRAKQLVEAAKAELTIF--GEK 292
Query: 307 KKSLMEVVDFCLQRLN 322
+ L+ + DF R +
Sbjct: 293 AEPLLAIADFITNRTH 308
>gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
Length = 322
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++ + + + +++ I +GGK LR L L A E V AI
Sbjct: 16 LEQIQQRLEQVATLREPQVHTLIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAI 75
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130
E +H ATL+HDDV+D + +RRG GN+ ++ GDFL + F ++ E +
Sbjct: 76 EALHLATLVHDDVLDHADIRRGMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDL 135
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + GE+ Q S L T YL I KTA LF+ A + I + +
Sbjct: 136 RTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQ 195
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +G LG+AFQ++DD+LDY + K ED NG TLP +
Sbjct: 196 KKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLP----LIYAYQTVP 251
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ K + N + I+R++ L A++Y +A +L LP S K +L
Sbjct: 252 DQLKPLTKTAEQIAANADEIAAIVRKHG-LPQAHQLAFTYTHRAITALNPLPSSPTKAAL 310
Query: 311 MEVVDFCLQRLN 322
++ LQR +
Sbjct: 311 TKLTQQLLQRTH 322
>gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 361
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 152/317 (47%), Gaps = 3/317 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
L D+ + +L+ S V +I + + SGGKRLR L + A + Y+ +
Sbjct: 47 RADILADLGAIEQRLLECTQSRVAVISAAGMHTVRSGGKRLRAALAVLAARLGHYQLERV 106
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A E IH A+L+HDD+VD + RRG++ W N +++VGD+ + A + +
Sbjct: 107 IHPAAAAELIHAASLVHDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARS 166
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + T+ EGEL +++++ D YL+ +KTAVLF AA + +
Sbjct: 167 PDPRIITFYAEAVQTICEGELSPVTVAEPFDKALRQYLYKTGAKTAVLFEAACKAGMVAG 226
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + AL SYG +LG+AFQ++DDVLD+ G+ +GK G D R G TLP+I A
Sbjct: 227 GGSDEEIAALGSYGYDLGMAFQIIDDVLDFIGDERTLGKPAGNDLRQGTITLPLIYATAA 286
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ S + + + + + A Y +A L P S
Sbjct: 287 SPSQVLRDVLLHT---PPSDTLVAEVIREVINAGGVAAAQTEAARYIDQAVSHLERFPSS 343
Query: 305 SWKKSLMEVVDFCLQRL 321
+++L+++ F L+R
Sbjct: 344 PARQALIDIAHFVLERS 360
>gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21]
gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21]
Length = 324
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
L + + + + +KY + GGKRLRP+LTL A + + A AIE H
Sbjct: 13 EALTERNFPDNPNTLYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKEGLPAALAIEMFH 72
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEA 132
TL+HDD++D++ LRRG+ W T++L GD L +A+ ++ E K + E L+
Sbjct: 73 NFTLMHDDIMDEAPLRRGRETIHKKWDINTAILSGDATLIRAYQLLAECKPELLAELLKV 132
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ +A + EG+ + K VTEE+YLH+I+ KT+VL AALE+ +++ G R
Sbjct: 133 FNKMAQEVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLLGAALEIGAILGGADKQDRS 192
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L ++G+N+GIAFQL DD+LD G+ ++ GK +G D K T +I A Q +K
Sbjct: 193 NLYTFGVNIGIAFQLQDDILDVYGDPSKFGKQVGGDIIENKKTYLLINALQLAKGSDKQE 252
Query: 253 WKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK-SL 310
+ + + + I + + S+ ++A +L + + KK SL
Sbjct: 253 LIHWTEINEFDQQQKIDRVTAIYNDLGIEKLAHKKKMSFAEQAYQALEAMAVAREKKLSL 312
Query: 311 MEVVDFCLQRLN 322
+E + L R +
Sbjct: 313 IEFTETLLIREH 324
>gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei
str. Twist]
gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma
whipplei str. Twist]
Length = 338
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 20/329 (6%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D +++V L+L+ + ++V +L+ SGGKR RP+L L T+ M D
Sbjct: 17 SLSDDISPALDRVEDLLLETVGDCH----EIVSHLLVSGGKRARPLLVLLTSCMGSGIND 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A IE IH +L HDDV+D++ +R G + A +WG ++L GDFL ++A + +
Sbjct: 73 AVIRAAAGIELIHLGSLYHDDVMDNAYIRHGSITAHRLWGKSAAILAGDFLFAKAGVLGL 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ ++ G+L + + E Y+ V + KT L +A+ +V ++
Sbjct: 133 NLDKRAIAVQTEAFQRMIS-GQLSETLGISDSLDPLEAYIEVSRGKTGSLIAASAQVGAI 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ S + L+ +G ++G+AFQLVDDV+D + GK G D R G +LP++L
Sbjct: 192 LGDASPSTLEPLRDFGESIGVAFQLVDDVIDL---SGKSGKTPGSDIRAGVMSLPILLLS 248
Query: 243 QRGTKREK-----------NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
S E + +R++ T A ++G
Sbjct: 249 NAAKDDRDSAVLLEEIERVRRHSGACGSDDYSSE-MNAVLAHLRKHDVTARTLEIARTWG 307
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK +L+ LP+ + + +L+ V+ + R
Sbjct: 308 DKAKHALKKLPECAPRDALLAFVETVVSR 336
>gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
1704]
gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
1704]
Length = 477
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 102/377 (27%), Positives = 161/377 (42%), Gaps = 68/377 (18%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT---------------- 50
+ K+++ + I + + S ++ V KY S GK++RP+L
Sbjct: 104 MVAKELKFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLISQATALMPRSPRD 163
Query: 51 ---------------------------LATALMLEYRG-------------DNHVLLACA 70
L TA L + LA
Sbjct: 164 RQILDAAGVNAAISSPAILADTNPDYNLLTAPSLTGNETAYTFAESDENILPSQRRLAEI 223
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + E
Sbjct: 224 TELIHTASLLHDDVIDNAVTRRSGVSANLEFGNKMAVLAGDFLLGRASVALARLRDPEVT 283
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLI 183
E ++ V L EGE QL + + +I K+A L S + ++L+
Sbjct: 284 ELMATVIANLVEGEFMQLRNTAQDERNPAWTEDIITYYLQKTYLKSASLISKSCRSAALL 343
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V +A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ A++
Sbjct: 344 GHGAPDVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLLFAWK 403
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + ++G +++ A I+ ++ L T A Y KA ++ PD
Sbjct: 404 SHPELGALVGRKFCHEG-----DVQLARQIVSQSDGLEQTRALAQEYSDKAVQAISIFPD 458
Query: 304 SSWKKSLMEVVDFCLQR 320
S K+ L++ + + R
Sbjct: 459 SEAKRGLIDTCEKVMIR 475
>gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
Length = 324
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +GM++G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 188 AEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + + E ++ I + E + Y A +SL +
Sbjct: 248 KQREELNRWLNAETFQPAEKIEAVTEIYNQLNIRNVCENKMREYYTLAMESLAAVAVAED 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
Length = 325
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 7/315 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66
+++++V ++ I + + I D + ++ SGGK +RP + ++ + R + +
Sbjct: 14 LHEELKQVKKIMRDSIQIENKAIKDAILSVLDSGGKMVRPAYLILFSMWNDNRNKEEVLA 73
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL HDDV+D+S++RRG+ GN+ ++ GD+LL+ + + +K
Sbjct: 74 IAAALELLHVATLFHDDVIDESSVRRGQETISAKLGNRVAIYAGDYLLTVCYQLLSSYSK 133
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
++ + + +GEL Q+ LDVT +DYL I+ KTA LF +
Sbjct: 134 DLVNIQIPTSGMMQVIQGELSQMEERYRLDVTVQDYLKRIEGKTAQLFMLSC--VMGEQF 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ G +G++FQ++DD+LDY + ++ GK + ED G TLP+I+A +
Sbjct: 192 SVLKEEARARQIGHAIGMSFQILDDILDYEIDAHQFGKPVLEDVAQGVYTLPLIMALSKK 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K + IS KK ++ ++ + + A Y +A + LP+ +
Sbjct: 252 EKELLPLLEKKEL---ISEVERKKVQQLVLKSGGVESAKELAKKYTDRALQQIERLPEKN 308
Query: 306 WKKSLMEVVDFCLQR 320
K L ++ LQR
Sbjct: 309 VKAMLFDITSRLLQR 323
>gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
Length = 319
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 8 TLKD--MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
LKD + K + + I D++++ ++ Y I SGGKR+RP+L +L Y G + +
Sbjct: 5 VLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGKHWL 64
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ E IH A+LLHDDVVD++ RRG + +GN+T++L GD+LL+ +
Sbjct: 65 DVGAIAELIHAASLLHDDVVDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDHLNGLG 124
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
E +E + V L+ EL Q+ KN +T + Y +I KTA LF+ + +++
Sbjct: 125 YPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKIIYGKTASLFAVVCVSAGILSD 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
++ L+ +G++LG FQ DD +DY ++ GK +DF NG T P++L R
Sbjct: 185 KNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASKSGKIPLKDFYNGLYTYPILLLLDRA 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +K S + S + ++ + + + L +S+
Sbjct: 245 DRNDKKLIHSLFAKPERSQGDGIVILSLLSRYQIRERMDAEFQTIADNLLKFLNGFLEST 304
Query: 306 WKKSLME 312
+ L E
Sbjct: 305 IRNLLKE 311
>gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 51/332 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++++ E + ++K + E+ + +KY + SGGKR+RP+LTL A +L
Sbjct: 1 MDKIKNILKAKAEVIEENLIKLLDCQDELAPQLTKSMKYTLLSGGKRIRPILTLLIAELL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
E + A+E IH+ +L+HDD+ LRRGK LV+G T++L GD LL+
Sbjct: 61 EGNYQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLT 120
Query: 116 QAFCM------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF + + K + G ++N D+T ++ V ++KT
Sbjct: 121 YAFQVLADLELKPDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ + + ++AL +Y +G+ FQ+VDD+LD GE MGK +G D
Sbjct: 181 GALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETEAMGKVVGRDQ 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + A
Sbjct: 241 ELNKATYPKLL--------------------------------------GLKKAQKEAEK 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
Y ++AK++L + K L ++DF L+R
Sbjct: 263 YAKEAKEALIIFGKKAEK--LEALIDFILKRQ 292
>gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
Length = 382
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 19/337 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
L+D + ++ + ++ + + E++ +V +Y K +RP L L TAL +
Sbjct: 48 ELQDKLGRYIQGMRETFIRDLSTSNELLTEVSQYYAKRPSKLMRPRLILLTALAVNASVG 107
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V LA +E IH +LLHDDV+D+S RRG ++A +GN+ S+L GDF+L +
Sbjct: 108 ERDALPQQVRLAEIVEMIHVVSLLHDDVIDESDTRRGDLSAPSKFGNKNSILAGDFVLGR 167
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLS---------KNLDVTEEDYLHVIKS 167
A ++ ++ +A+ ++ V TL EGE+ Q S Y+ I
Sbjct: 168 AMSLIAALENFDAMREIAGVVTTLVEGEIIQAEDSIALGEKAKVGQAADQWGSYMERIFL 227
Query: 168 KTAVLFS--AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT LF+ + A+ YG LG+AFQ++DD LD++ +
Sbjct: 228 KTGSLFARALRSTAMLSGLPSDDERVLAVGDYGTELGLAFQIIDDALDFKETSAD--SAG 285
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+ + + ++ + + I+RE AL T
Sbjct: 286 KPTGAVDLSLGLITAPVFYALEERPDELAPYVSRKCSEPGDTAEVVRIVRETSALPRTYA 345
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + QKA+++L+ LP + + +L + L R +
Sbjct: 346 LAAQHAQKAREALQVLPSTPARDALEALTMKVLSRDH 382
>gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17]
gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17]
Length = 323
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 9/317 (2%)
Query: 13 EKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++ LI + + S + +KY++ GGKR+RP L L + + + +
Sbjct: 5 DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
ACA+E H TLLHDD++D++ +RRG+ W +VL GD +L A+ + E S
Sbjct: 65 ACALETYHNYTLLHDDLMDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECDSH 124
Query: 128 EALEALSLVACTLAEGELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
A L GE +Q+ + DV EE+Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 125 LAEVLRLFTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACAMKIGALLAD 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
L +G +G+AFQL DD LD G+ GK IG D + K T +I AF R
Sbjct: 185 APADDADNLYRFGEKIGLAFQLQDDYLDVYGDPAVFGKAIGGDIVSNKKTYMLINAFNRA 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDS 304
++ + + + KA + + + + + Y ++K L + S
Sbjct: 245 DNAQRAELERWVRATDFDRQEKVKAVTGLYDEMGIDRLAQQKIAGYFNESKTYLDRVGVS 304
Query: 305 SWKKS-LMEVVDFCLQR 320
+KS LM ++R
Sbjct: 305 DERKSELMRYAQRMMKR 321
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + V ++ + + + + + + + Y + +GGKRLRP+LTL ++
Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + A AIE IHT +L+HDD+ D+ LRRG+ V+G +L GD LL+ A
Sbjct: 62 NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F +++ + L A + V E I+ +
Sbjct: 122 FEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNK 181
Query: 178 EVSSLIAG---------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ ++ + + + Y N+G++FQ+VDD+LD G+ +++GK +G D
Sbjct: 182 TAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESKLGKKVGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T P +L L ++ A+
Sbjct: 242 IENHKSTYPSLL--------------------------------------GLDKSKEIAH 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +AK S+ L S L + ++ + R
Sbjct: 264 NLIDEAKKSIEKL--SDDVDFLNGLAEYIIDR 293
>gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
Length = 323
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 7/317 (2%)
Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ + + + ++ E++ + Y + GGKRLRPML + + + A A
Sbjct: 8 LSAIENYLAQTEFPAEPELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAAAA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++A+RRGK + WG ++L GD ++ A+ ++ +
Sbjct: 68 VEVFHNFTLLHDDIMDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPANLLP 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ LS + EG+ + + V+ +Y+H+I+ KT+VL + ++ + +++ G
Sbjct: 128 QVLSTFNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGSVVIGAMLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L+ + + LG+AFQL DD+LD G+ +GK IG D GK T +I A +
Sbjct: 188 DEDCRRLRRFAVELGLAFQLQDDLLDSYGD-QRLGKAIGGDILEGKKTYLMITAMSHADE 246
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++ D +S E + K I TE + ++A L L +
Sbjct: 247 ATREMLRTAYRDPALSDAEKIGKVKSIYDRLDVPRLTEQQIQLRFERALSILDTLSVAPS 306
Query: 307 K-KSLMEVVDFCLQRLN 322
+ + + + + R N
Sbjct: 307 RTQRMRDYAMSLMDRKN 323
>gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
ATCC 10379]
gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
ATCC 10379]
Length = 315
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 14/325 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LE 58
+K + L + +E I + S+ E + ++VK +GGKR+R +L L A + E
Sbjct: 2 LKQYDTLVHEVLED----IFEITRSNDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNFE 57
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A +E IHTA+L+HDD++D++ RRG V + N+ ++ VGD+L S
Sbjct: 58 LNKKDIIRMASIVEIIHTASLIHDDIIDNADTRRGSVTMNKEYSNEFALRVGDYLFSVVL 117
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
V + +++ L+ L GEL Q ++ DYL IK KTA+L + A
Sbjct: 118 KEVAKFDNEKIHLYLAETLKELCIGELIQADGLYDIKTRRLDYLKKIKRKTAILIAFACV 177
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S++A + ++ SYG LG+++Q++DD LD+ G +GK +G+D NG TLP
Sbjct: 178 AGSIVADASDEDIRSAFSYGYYLGMSYQIIDDYLDFVGGTQNLGKEVGQDLMNGNITLPA 237
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDS 297
+LA + + NF S E + +R N + L +T + Y +KA++S
Sbjct: 238 LLAKEENPELFCNFT------KDTSSEEKDEIINYIRNNDKVLSETLTVSRRYLEKAQES 291
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + DS+ K L +++ +R N
Sbjct: 292 IDNI-DSTVKTELTFIMNKLARREN 315
>gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
Length = 355
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 150/320 (46%), Gaps = 1/320 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ +D+ + + + +L+ GGK LRPM A M
Sbjct: 35 LAALQSWVQRDLRDFEAEL-ATLPKGARAVQKAAHHLLELGGKHLRPMCVALAAKMGTGF 93
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+E +HTATLLHDDVVD RRG AR ++GN SV GD+LL A
Sbjct: 94 DAHGRQLAMAVELVHTATLLHDDVVDIGDSRRGVPTARTIYGNAASVFAGDWLLVDALRR 153
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +T + L+ + + + E QL +L +EE Y V++ KTA LF A+
Sbjct: 154 IRQTGLSDLLDRMLAIIEEMILAESLQLERRGSLGDSEEVYFQVVEGKTAALFRWAMYAG 213
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
G+ AL+ YG +LG+AFQ+VDD+LD+ G+ GK + D R GK T P+IL
Sbjct: 214 GRAGGLDEDACLALERYGRHLGVAFQVVDDLLDFSGDERFTGKGLFADLREGKSTYPLIL 273
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A +R ++ G + ++ M AL D+ A + A +L
Sbjct: 274 ALRRDEALRPLVEEALRGSGDLPETTVRALLTSMERTEALADSRALAQEQVRLAVAALAP 333
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L D K +L+ V + + R
Sbjct: 334 LADGPGKNALVTVAEATVYR 353
>gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
TW08/27]
Length = 338
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 20/329 (6%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L D +++V L+L+ + ++V +L+ SGGKR RP+L L T+ M D
Sbjct: 17 SLSDDISPALDRVEDLLLETVGDCH----EIVSHLLVSGGKRARPLLVLLTSCMGSGIND 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A IE IH +L HDDV+D++ +R G + A +WG ++L GDFL ++A + +
Sbjct: 73 AVIRAAAGIELIHLGSLYHDDVMDNAYIRHGSITAHRLWGKSAAILAGDFLFAKAGVLGL 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ ++ G+L + + E Y+ V + KT L +A+ +V ++
Sbjct: 133 NLDKRAIAVQTEAFQRMIS-GQLSETLGISDSLDPLEAYIEVSRGKTGSLIAASAQVGAI 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ S + L+ +G ++G+AFQLVDDV+D + GK G D R G +LP++L
Sbjct: 192 LGDASLSTLEPLRDFGESIGVAFQLVDDVIDL---SGKSGKTPGSDIRAGVMSLPILLLS 248
Query: 243 QRGTKREK-----------NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
S E + +R++ T A ++G
Sbjct: 249 NAAKDDRDSAVLLEEIERVRRHSGACGSDDYSSE-MNAVLAHLRKHDVTARTLEIARTWG 307
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK +L+ LP+ + + +L+ V+ + R
Sbjct: 308 DKAKHALKKLPECAPRDALLAFVETVVSR 336
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 135/320 (42%), Gaps = 50/320 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KVN + + I + + + ++Y + +GGKR+RP+L +A+ ++ + ACA+E
Sbjct: 85 KVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVE 144
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G T+VL GD LLS AF V A
Sbjct: 145 MIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSLAFEHVATKTQNVAP 204
Query: 131 EALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L + ++ + V+ + ++ + KTA L AA+ ++
Sbjct: 205 QRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHQHKTAKLLEAAVVCGAI 264
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + ++SY +G+ FQ+VDD+LD +E+GK G+D K T P ++
Sbjct: 265 MGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKDLITDKATYPKLM-- 322
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L A KA + L
Sbjct: 323 ------------------------------------GLEKARQYAGELMAKAMNELSYF- 345
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS+ L + + R N
Sbjct: 346 DSAKAAPLYHIASYIANRQN 365
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + I + ++Y + +GGKR+RP+L +A ++ + + ACA+E
Sbjct: 102 VNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEI 161
Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD+ +D+ LRRGK V+G T+VL GD LLS AF + + S+
Sbjct: 162 IHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVES 221
Query: 132 ALS----------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + +A G++ ++ N V E + KTAVL ++ +
Sbjct: 222 DRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGA 281
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + + ++ Y +G+ FQ+VDD+LD E+GK +D + K T P ++
Sbjct: 282 IIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKATYPKLM- 340
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A KAK+ L
Sbjct: 341 -------------------------------------GLEKAKEFADELLGKAKEELSFF 363
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
+ K + L+ + D+ QR N
Sbjct: 364 --NPTKAAPLLGLADYIAQRQN 383
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + I + ++Y + +GGKR+RP+L +A ++ + + ACA+E
Sbjct: 102 VNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEI 161
Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD+ +D+ LRRGK V+G T+VL GD LLS AF + + S+
Sbjct: 162 IHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVES 221
Query: 132 ALS----------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + +A G++ ++ N V E + KTAVL ++ +
Sbjct: 222 DRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGA 281
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + + ++ Y +G+ FQ+VDD+LD E+GK +D + K T P ++
Sbjct: 282 IIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKATYPKLM- 340
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A KAK+ L
Sbjct: 341 -------------------------------------GLEKAKEFADELLGKAKEELSFF 363
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
+ K + L+ + D+ QR N
Sbjct: 364 --NPTKAAPLLGLADYIAQRQN 383
>gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC
BAA-286]
Length = 326
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ VN I + + + + D + Y++ GGKR+RP L L + + + + + +A A
Sbjct: 12 LDIVNTRITQINYKNKPQSLFDPITYILSLGGKRVRPALALMSYNLYKEDVERVIPIALA 71
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK + W + T+VL GD +L +A+ + +T S++
Sbjct: 72 IEVFHNFTLLHDDLMDRADMRRGKPTVHIRWNDNTAVLSGDAMLIEAYKEIAKTDSEQLP 131
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
S A + G+ + + LDVT +YL +I+ KTAVL AL+ +++AG
Sbjct: 132 RVLDLFSETATEICCGQQYDMEFEQRLDVTIPEYLEMIRLKTAVLLGCALKEGAIVAGAP 191
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ L +G+N+G+ FQL DD+LD G+ GK IG D K T +I A
Sbjct: 192 DADADNLYEFGINVGLGFQLKDDLLDVYGDSESFGKKIGGDILCNKKTFLLITALADPLT 251
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
R + D + + ++ I + +E Y +KA L + +
Sbjct: 252 RNELLTWIDKTDFEQNK-KIEAVTKIYDKLDLKTKSEKLISDYYEKAMGCLDKVSIIDER 310
Query: 308 K-SLMEVVDFCLQRLN 322
K L+++ R++
Sbjct: 311 KTELLKLAKNLTSRIS 326
>gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 356
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 6/323 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ E ++ V + + + + + +++I +GGKR RPML T+ +
Sbjct: 38 EAFEAYVGDQLDAVERRLSAITLTAANPFLAEAAEHIIAAGGKRFRPMLVAVTSQLGPQP 97
Query: 61 GDNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D +A + E H A+L HDDV+DD+ALRRG +A +GN T+++VGD+L ++A
Sbjct: 98 NDAAAQIAAVVVELTHVASLYHDDVMDDAALRRGVPSANAAYGNSTAIMVGDWLFARASN 157
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V + L G++ ++ + YL+V+ KT L +
Sbjct: 158 QVATLGNDFVRMQADT-FAELVTGQIDEMRGPQPGHDAMLHYLNVVAGKTGALIRTSAVF 216
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ +G V AL +GM +G+ FQL DD++D + + GK G D R G TLP +
Sbjct: 217 GAMTSGASREVLDALAQFGMQIGVVFQLADDLMDIMSDDS--GKAPGTDLREGVSTLPTL 274
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + KS I + L + ++R N + + + A+ L
Sbjct: 275 MLAA-SEDSDDDELKSLIAGDLADDDVLARTLAMLRANHVIEEARADIVQRAELARKQLD 333
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LPD + ++L + D + R N
Sbjct: 334 LLPDGAATRALSRLCDEVVSRSN 356
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + E I + ++Y + +GGKR+RP+L LA ++ + ACA+E
Sbjct: 85 VNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESMAMPAACAVEM 144
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK V+G + +VL GD LL+ AF + + +
Sbjct: 145 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAFEHIAVSTVGVSTA 204
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ LA+ ++ + DV E + KTA L A++ + ++
Sbjct: 205 RIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHKTAALLEASVVLGAI 264
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 265 LGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLM-- 322
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A + A+D L
Sbjct: 323 ------------------------------------GIEKSREFADKLNKDAQDMLSGFD 346
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 347 PEKA-APLIALANYIAHRQN 365
>gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
Length = 364
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 13/320 (4%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN I + + +D++ + D + +GGKR RP++ LA + + A AI
Sbjct: 46 DLVNTYIPQGMVADMDCYLYDPLLAYSKNGGKRHRPLICLAACAAVGGDVRKALSSAAAI 105
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E HTA L+HDD+ D++ LRRG+ L +G ++ +GD LS V++ + +
Sbjct: 106 EHFHTAALIHDDIADEATLRRGEPCLHLTYGMGLAINMGDLGLSLVNGTVMKDPALDDHT 165
Query: 132 ALS------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---AALEVSSL 182
+ + EG+ + +++ ++I + L + ++
Sbjct: 166 KVRVVTELIEMTRRTIEGQAMDIGWARDERYDISPENYLIMATHKTAHYSGAVPLAIGAI 225
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G +AL++YG++ G+AFQ+ DD+L+ G+ N +GK+ G D GK TL V+ A
Sbjct: 226 VGGATEGAIEALRNYGLDTGLAFQIQDDLLNIEGDPNVVGKDWGNDITEGKRTLMVVHAL 285
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCL 301
Q +++ ++ + L +A IMRE+ ++ A + AK+ L L
Sbjct: 286 QNS--TQRDRLVEILSSKTTDHDALVEAVSIMRESGSVEYARNYAENLTSIAKNRLVDML 343
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S+ + L+ + D+ + RL
Sbjct: 344 EPSTARDLLLSMADYFVNRL 363
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 50/321 (15%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + + + ++Y + +GGKR+RP L LA ++ + ACA+
Sbjct: 31 KLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGDVQAALPAACAM 90
Query: 72 EFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ RRG+ V+G ++L GD LL+ AF + +
Sbjct: 91 EMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAFEHIARATKGVS 150
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSS 181
E + V L + ++ + + + + KTA L A++ +
Sbjct: 151 AERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKTAALLEASVVCGA 210
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + + L+ Y N+G+AFQ+VDD+LD ++GK +D K T P +L
Sbjct: 211 IVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDLAVNKTTYPKLL- 269
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A +A L
Sbjct: 270 -------------------------------------GLEKSREVAEQLINEAIQQLDGF 292
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
L+ + + R N
Sbjct: 293 DKVKA-APLVALAKYIGYRQN 312
>gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
Length = 350
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/311 (21%), Positives = 129/311 (41%), Gaps = 21/311 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
++++ GGKR+R +L + M+ + D + + ++E I + L+HDD++D+S LR
Sbjct: 39 EILEEYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDIMDESDLR 98
Query: 92 RGKVAARLVWGNQT------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
RGK ++ + + A +E S A V
Sbjct: 99 RGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSSSDFPAELKVKAI 158
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIK-------SKTAVLFSAALEVSSLIAGVQNSVRQ 192
E+ + + + L K K +L + +
Sbjct: 159 HKLNEIIEYTGYGQIIDIYSGALEEFKEEDLLLLHKYKTARYTIEGPLALGIILAGKEPE 218
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+++Y + +GIAFQL DD+L G +GK + D GK TL +I A + G++ ++
Sbjct: 219 GIENYAIPVGIAFQLQDDILGLFGSEEGIGKPVTSDLAEGKKTLLIIKALENGSEEDRKI 278
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSL 310
+ + ++ E L+K I+R +L ++ A ++AKD L+ + D + L
Sbjct: 279 IMQALGNPAVTYEQLEKVREIVRRTGSLDYSKNLAKKMVEEAKDYLKGIEVEDEEMRDFL 338
Query: 311 MEVVDFCLQRL 321
+ + D+ + R
Sbjct: 339 LWLADYMISRS 349
>gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
Length = 324
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ VN + + + ++Y++ GGKR+RP L L + ++ ++ AC
Sbjct: 8 LKLVNNHLDSLADERQPRHLYEPIEYVLSLGGKRIRPTLMLLAYNLYREHPEDILMPACG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + LRRG W T++L GD +L A+ + + + +
Sbjct: 68 IETYHNYTLLHDDLMDQADLRRGHETVHKRWDANTAILSGDSMLVLAYQRMAQCRPDKLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L T + EG+ + DVTE++Y+ +I+ KT+VL + AL++ +++
Sbjct: 128 EVIDLFTQTALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACALKIGAILGDAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +G +G+AFQL DD LD G+ GK IG D + K T +I AF R
Sbjct: 188 AEDANNLYRFGEKIGLAFQLQDDFLDVYGDSKVFGKAIGGDIVSNKKTYMLINAFNRADA 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + + A + + + + + +Y +++K L + +
Sbjct: 248 QQRAELERWTQLKDFDRQEKIDAVTALYNDMGIDRLAQDKMATYYEESKKYLAAVQVPTE 307
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L ++R
Sbjct: 308 KKRELTAYAQQMMKRT 323
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 52/319 (16%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V + + + E I + ++Y + +GGKRLRP+L + + + ACA+E
Sbjct: 23 VEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEM 82
Query: 74 IHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD+ RRGK V+G ++L GD LL+ AF V+ Q +
Sbjct: 83 IHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQ 142
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
AL V L ++ L D+T E + KT L A++ ++
Sbjct: 143 ALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAI 202
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG +Q L Y N+G+AFQ+VDD+LD E+GK G+D + K T P +L
Sbjct: 203 LAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDVKAQKATYPSLL-- 260
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + +A S +A +L
Sbjct: 261 ------------------------------------GLEASRAQAQSLIDQAIVALEPFG 284
Query: 303 DSSWKKSLMEVVDFCLQRL 321
S+ + L + ++ + R
Sbjct: 285 PSA--EPLQAIAEYIVARK 301
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + + V + + + + ++I + ++Y + +GGKR+RP++ +A M
Sbjct: 57 DLKAYFAQKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGG 116
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IHT +L+HDD+ +D+ LRRG +++G+ ++L GD LLS +
Sbjct: 117 TEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTS 176
Query: 118 FCMVIETKSQEALEALSLVACTLA-----------EGELRQLSLSKNLDVTEEDYLHVIK 166
F + E + A +V G++ L V+ E+ +
Sbjct: 177 FEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHT 236
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L ++ +++AG + ++Y ++GIAFQ+ DD+LD +GK G
Sbjct: 237 HKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAG 296
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D K T P ++ L
Sbjct: 297 KDEDTDKTTYPKLM--------------------------------------GLDGARAE 318
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +A DSL P L+ + + ++R N
Sbjct: 319 ADRLYSEAIDSLA--PYGEKAVPLIAIAKYIVERQN 352
>gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus]
Length = 357
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 89/303 (29%), Positives = 144/303 (47%), Gaps = 10/303 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ DVV Y + GK +RP +TLA + + +A IE+ H A+L+HDD++D+
Sbjct: 53 SPVRDVVHYALDEPGKMIRPTITLAACQAVGGDPEMFGRVAAGIEYGHLASLMHDDLIDE 112
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC------TLA 141
A RR + +G ++V+ GD LL AF + + A +
Sbjct: 113 DATRRRIPSVWNAFGVPSAVIAGDLLLFTAFHALACQQGVPAERIVRTFEAVTRSGVDAC 172
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G +++L+ N+ ++ E YL + KT + E ++I G +L+ YG +L
Sbjct: 173 FGTSLEMALAGNISISTETYLKMAAGKTGAVLRGCSEGGAVIGGGSPRQIASLRDYGEDL 232
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI---- 257
G+AFQ++DDVL Y + MGK + D RN +PTLPV+LA T+ E++F ++
Sbjct: 233 GVAFQIIDDVLPYESDEETMGKPVVSDLRNRRPTLPVLLARDECTEDERDFLETVYSTGI 292
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
DG + + ++R AL A Y A DSL L D++ + L +V
Sbjct: 293 GDGPAAEAAHHRMRAVLRRTGALAGAREMADEYCASALDSLAGLRDNAGVRLLRSLVHLA 352
Query: 318 LQR 320
R
Sbjct: 353 RDR 355
>gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5]
gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5]
gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 359
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/339 (22%), Positives = 143/339 (42%), Gaps = 30/339 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-------- 56
L +++ + I + ++ E++ KY++ +GGK +RP L + A
Sbjct: 29 ALVNREVTAIQEHIQSLVTNTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSA 88
Query: 57 ---------LEYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
L+ + LA E IHTA+L+HDDV+D + RRG+ A V+
Sbjct: 89 RLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDSTGTRRGRPALHKVYDA 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GD++L++A + + + ++ L GEL Q+ ++ E+
Sbjct: 149 KRAVLAGDYMLARASFYIATLQVPRIVILMTTALEELTAGELIQMDGCFDIPRYEQKSFC 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S A ++ ++ +G +LGIAFQ++DD LD G+ +GK
Sbjct: 209 KTASLIANSLASTAVLADPGNEALEQ---TAFDFGKHLGIAFQILDDCLDITGDEKMLGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G T+PV+L +R K + + + + + A+ +
Sbjct: 266 PKLVDMKEGIATIPVLLVARRNAKVGEMVC-----RRFAEPGDAEFCLEAVEKEGAVAEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+RA + + +SL L S + +L + + R +
Sbjct: 321 MHRADEHCRLGLESLHKLHHSPARDALESALSMVMNRKS 359
>gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
Length = 350
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 21/311 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
++++ GGKR+R +L + M+ + D + + ++E I + L+HDD++D+S LR
Sbjct: 39 EILEEYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDIMDESDLR 98
Query: 92 RGKVAARLVWGNQT------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
RGK ++ + + A +E S A V
Sbjct: 99 RGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSSSDFPAELKVKAI 158
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIK-------SKTAVLFSAALEVSSLIAGVQNSVRQ 192
E+ + + + L K K +L + +
Sbjct: 159 HKLNEIIEYTGYGQIIDIYSGALDEFKEEDLLLLHKYKTARYTIEGPLALGMILAGKEPE 218
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+++Y + +GIAFQL DD+L G E+GK + D GK TL +I A + G+ ++
Sbjct: 219 GIENYAIPVGIAFQLQDDILGLFGSEEEIGKPVTSDLAEGKKTLLIIKALENGSDEDRKI 278
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSL 310
+ + ++ E L+K I+R +L ++ A ++AKD L+ + D + L
Sbjct: 279 IMQALGNPAVTYEQLEKVREIVRRTGSLDYSKNLAKKMVEEAKDYLKGIEVEDEEMRDFL 338
Query: 311 MEVVDFCLQRL 321
+ + D+ + R
Sbjct: 339 LWLADYMISRS 349
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 133/331 (40%), Gaps = 50/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
E+ + E+VN + + + I + ++Y + +GGKR+RP+L +A+ ++
Sbjct: 68 QFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGGDP 127
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ACA+E IHT +L+HDD +D+ RRG +G +T+VL GD LLS AF
Sbjct: 128 VAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDALLSLAFE 187
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAV 171
V + + + + V L + + + + + ++ KTA+
Sbjct: 188 HVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIHLHKTAI 247
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++ +++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 248 LLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGKTAGKDLAT 307
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P ++ + + A +
Sbjct: 308 DKATYPKLM--------------------------------------GIDKAKEFADALV 329
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L + L D+ R N
Sbjct: 330 AQAHKELDYYDFAKA-APLYHFADYIAYRQN 359
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +N + K + I + ++Y + +GGKR+RP+L +A+ ++
Sbjct: 93 EFKKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSE 152
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ + ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 153 ESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFE 212
Query: 120 MVIETK---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + ++ + L G++ LS +V + ++ KTA
Sbjct: 213 HIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTA 272
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + ++I G + + L+ + +G+ FQ+VDD+LD E+GK +D
Sbjct: 273 ALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELGKTACKDLV 332
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 333 ADKLTYPKLL--------------------------------------GLEKSREFAQEL 354
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A D + K L+ + D+ R N
Sbjct: 355 NKQAMDQISVFDVEKAK-PLICLADYIAHRQN 385
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK LE + + VN + + + V + +++ + +GGKRLRP+L +A A +
Sbjct: 1 MKNLETYLARRQKAVNEALDRILADCVPGGRLFSAMRHSLKAGGKRLRPILCMAAAEAVG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ + CAIE IHT +L+HDD+ D+ LRRG+ A + T++ GD L +
Sbjct: 61 GTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDALHTL 120
Query: 117 AFCMVIETKSQEA---------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF ++ + + L++ ++ + + +
Sbjct: 121 AFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKELHRL 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +A++ +L L Y N+G+AFQ+ DD+L+ G+ GK+IG
Sbjct: 181 KTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGKSIGT 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ + + A
Sbjct: 241 DHVLGKATFPNLM--------------------------------------GIDASRKFA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+K+ ++ L + L V + ++R
Sbjct: 263 AQLVEKSLQAIESLGIKA--NPLRAVAKYVIERK 294
>gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 312
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 3/307 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70
M+ ++ ++++I I + Y I +GGKR+RP L + + + + V LA
Sbjct: 1 MKALDAFLMEQISQFEPEIREHAAYSIDTGGKRIRPSLIFFSGWQNDGQVDEKLVRLAAV 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H ATL+HDD++D++ +RR + + N T+VL+GD L S A + + + E
Sbjct: 61 VETVHLATLVHDDIMDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYLATQFPTNEVC 120
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+++ + GE+ Q + D+ Y VI KTA LF + + + +AG ++S
Sbjct: 121 RDIAVSMRQVCTGEILQTMQRGDPDLDMATYFRVIDLKTAELFRVSCHLGARLAGFEDSY 180
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
QA ++G +LGIA+Q+ DD+ D G ++GK +G D GKPT+P+IL R +
Sbjct: 181 VQAAGAFGRHLGIAYQIYDDMTDLFGSQEKIGKTLGTDIATGKPTMPLILMRDRLPDDQA 240
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ +++ ++ +RE + + K +D++ ++S L
Sbjct: 241 QLLRDSLSGKI--EADVPHWLEKLREMGIFEEVRQAIFDEITKGRDAIAPFQNNSSAPYL 298
Query: 311 MEVVDFC 317
+ D
Sbjct: 299 RTISDLL 305
>gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 312
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 93/308 (30%), Positives = 152/308 (49%), Gaps = 9/308 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++ + + + S V+ I I +GGKR+RP+L + L D ++L C IE
Sbjct: 12 KRIELALSENLDSSVDTILKAGNSTIEAGGKRIRPLLLVYLVESLGGDVDKAIILGCGIE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+IH A+LLHDDVVD + RRGK + V+G + +VL GD+L ++A + + + ++
Sbjct: 72 YIHIASLLHDDVVDKADSRRGKPSVNKVFGQEAAVLTGDYLYAKALFLYANYGNAKMIDI 131
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
LS +AEG+L +L + E+ Y +I KTA L A V +LI+ +
Sbjct: 132 LSKAVMNMAEGQLLELKSIG-SIIDEKTYFDIIDGKTAYLIGACFGVGALIS--NYEEYE 188
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
G+ LG AFQL+DD LDY + ++GK D + GK T P K +K
Sbjct: 189 KFFDIGLKLGRAFQLIDDALDYEVDSQKLGKPSRNDLKEGKVTYP---VISMLDKLDKEL 245
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K+ + S E L + E ++ T+ A+ ++ K L P + LME
Sbjct: 246 LKNILVSQNPSQEELDSIIDTVIEKGGVMRTKELAFRLLEEVKQELSYYP---ITEKLME 302
Query: 313 VVDFCLQR 320
+++ ++R
Sbjct: 303 LIEKTVKR 310
>gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424]
gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424]
Length = 320
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 13/325 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LE 58
+K + L + +E I K SD + + ++K +GGKR+R +L L A + E
Sbjct: 6 LKQYDTLVQEVLED----IFKITRSDDKKLNTIIKEYFLNGGKRVRVLLLLICANLGDFE 61
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
N + +A +E IHTA+L+HDD++D + RRG+ +G + ++ VGD+L +
Sbjct: 62 KNKKNIIRIASIVEIIHTASLIHDDIIDKAKTRRGQTTMSRAYGEEYALYVGDYLFATVL 121
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K + LS L GE+ Q N+ DYL IK KTA+L + A
Sbjct: 122 REIAEFKDERLHMYLSNTLKELCIGEIIQEEGLYNIRTRRTDYLKKIKRKTAILIAFATS 181
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S+++ N Q ++G LG+++Q++DD LD+ G +GK IG+D NG TLP
Sbjct: 182 AGSIVSCASNENIQRSYAFGYYLGMSYQIIDDYLDFAGGSETLGKEIGQDLINGNITLPA 241
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL-VDTEYRAYSYGQKAKDS 297
I+A + + KNF S+E + ++ ++ +T + Y +KA +
Sbjct: 242 IIAREHNSALFKNF------SKDSSLEEKQNLIKFIKNTESILDETLEISQRYLEKALLN 295
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L + + K+ L+ V+D +R N
Sbjct: 296 IENLGNDNVKEELVFVMDKLARREN 320
>gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
Length = 323
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 9/317 (2%)
Query: 13 EKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++ LI + + S + +KY++ GGKR+RP L L + + + +
Sbjct: 5 DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
ACA+E H TLLHDD++D++ +RRG+ W +VL GD +L A+ + E S
Sbjct: 65 ACALETYHNYTLLHDDLMDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECDSH 124
Query: 128 EALEALSLVACTLAEGELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
A L GE +Q+ + DV EE+Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 125 LAEVLRLFTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACAMKIGALLAD 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
L +G +G+AFQL DD LD G+ GK IG D + K T +I AF R
Sbjct: 185 APADDADNLYRFGEKIGLAFQLQDDYLDVYGDPAVFGKAIGGDIVSNKKTYMLINAFNRA 244
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDS 304
++ + I KA + + + + + Y ++K L + S
Sbjct: 245 DNAQRAELERWIRATDFDRHEKVKAVTGLYDEMGIDRLAQQKIAGYFNESKTYLDRVGVS 304
Query: 305 SWKKS-LMEVVDFCLQR 320
+KS LM ++R
Sbjct: 305 DERKSELMRYAQRMMKR 321
>gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 327
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 10/305 (3%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ ++Y++ GGKR+RP+L L + + + + A AIE H TLLHDD++D
Sbjct: 24 PAELYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQAMAIEIYHNYTLLHDDLMD 83
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA----E 142
+ +RRG W + ++L GD +L A+ + + E L + + A E
Sbjct: 84 RADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPVEQLGNVMGLFTETALEIGE 143
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ + DV+EE+Y+ +I+ KT+VL + AL++ + + + L +G NLG
Sbjct: 144 GQQYDIEFETRADVSEEEYIEMIRLKTSVLLACALKIGAWLGDAPRQDAELLYRFGENLG 203
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQL DD LD G+ GK IG D K T +I A R ++ + + +
Sbjct: 204 LAFQLQDDYLDVYGDPAVFGKKIGGDILCNKKTYMLINALGRALPADRERLEQWLEKEEG 263
Query: 263 S---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFC 317
+ E + + + + + Y ++A + L LP+ K+ L E+
Sbjct: 264 TYAPEEKIAAVTELYDKMGVRALCDEKIRFYFERAHEILDKVNLPE-ERKEPLWEMAQSL 322
Query: 318 LQRLN 322
L R +
Sbjct: 323 LNRKS 327
>gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
Length = 326
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 8/319 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNH 64
+ KVN I RI + D ++ + +GGK LRP L A + +
Sbjct: 12 INNALGKVNQTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQERL 71
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIE 123
+ +A ++E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F + V
Sbjct: 72 IKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQSAFGKDTAVYTGDFLFTIFFDLLVET 131
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L + + GEL Q+ +LD + DY + KTA +FS A E +
Sbjct: 132 MTGSPYLTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYF 191
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
K G N+GI+FQ++DD+LDY G+ K + ED G +LP++L
Sbjct: 192 GHSDRRTINLAKRIGQNIGISFQILDDILDYSGDERL-NKPVLEDLATGVYSLPLLLT-- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++++E+++K I+ + + + A + QKA+ + L D
Sbjct: 249 -LQNHRHELEPLLAKKRQMTIEDMEKVQKIVVTHGGVKKAQEIATKFTQKAQTEIDQLAD 307
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+K L V L R+N
Sbjct: 308 KHTRKMLKLVAKKLLTRVN 326
>gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999]
Length = 188
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 84/177 (47%), Positives = 114/177 (64%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ L DM++VN LI ++ SDV +I + Y++ SGGKRLRP+L + +A L
Sbjct: 8 DDIKQLAHDDMQQVNQLIQTQVDSDVALIQQLGFYIVNSGGKRLRPLLCVLSAQALGITN 67
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H LA IEFIHTATLLHDDVVD+S LRRG+ A ++GNQ SVLVGDFL S+AF M+
Sbjct: 68 QQHHHLAAIIEFIHTATLLHDDVVDESLLRRGRETANALFGNQASVLVGDFLYSRAFQMM 127
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+E + + + LS +A+GE+ QL + + TE+ Y VI SKTA LF AA +
Sbjct: 128 VELDNMKVMRILSDATNRIAQGEVMQLMNVNDPNTTEQSYFDVIYSKTARLFEAATQ 184
>gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 334
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 84/324 (25%), Positives = 134/324 (41%), Gaps = 11/324 (3%)
Query: 8 TLKDMEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ + + + E + + Y GGKR+RP+L L A M +
Sbjct: 9 IQDNLSYIETELQTLVAHCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMYGKDRAD 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A A+E H TLLHDDV+D S +RR + + +G ++L GD +LS A+ + E
Sbjct: 69 FIKAALALEIYHNFTLLHDDVMDHSEMRRNRPSVPAQFGIAQAILTGDAMLSLAYKLTQE 128
Query: 124 TK---SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ + G+ + DVT +Y +I+ KTAVL SAALE+
Sbjct: 129 YPLALQPAIMGVFNRMSQDIMVGQQMDMDFETRSDVTLAEYERMIRKKTAVLLSAALEIG 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA R L G+N G+AFQL DD LD G+ GK IG D K T +I
Sbjct: 189 AYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGDEATFGKPIGGDIAENKQTWLLIK 248
Query: 241 AFQRGTKREKNFWKS--TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A + +R + + E + A D L
Sbjct: 249 AQEIARERGEWEQLKAALAIPKEQREEKYRAVRAFYDAYGIPELIRKEIQEQSDWALDLL 308
Query: 299 RCLPDS--SWKKSLMEVVDFCLQR 320
+ +S + L++++ R
Sbjct: 309 SRMSNSYPEASQRLVDLIQKMAMR 332
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 49/331 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L++ ++ +N I SD+E+ +++KY + +GGKRLRP+LTL + E
Sbjct: 2 NLKEYMNIRLKDINNNIENIFDKSDIELENSFIEMLKYPLDAGGKRLRPVLTLLACELFE 61
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V+ A ++E IHT +L+HDD+ +D+ LRRGK + +G ++LVGD LL+
Sbjct: 62 GDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT-----EEDYLHVIKSKTAV 171
AF ++ + +++ L + A G + D L V+ +K
Sbjct: 122 AFQLLSKADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLHAKKTA 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
I+ ++ + + YG +G+AFQ+ DD+LD + +GK +G+D +
Sbjct: 182 AMIRGAVRLGAISSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDEKE 241
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T L + A
Sbjct: 242 GKLTYVKQF--------------------------------------GLEGAKKEAKKVT 263
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA + L +S K L+E+ ++ ++R +
Sbjct: 264 EKAIEYLNPYKESEAKNILIELANYIIERKS 294
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 133/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ ++ VN + + + I + ++Y + +GGKR+RP+L +A ++
Sbjct: 72 DLKSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAACELVGGEE 131
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ +F
Sbjct: 132 SMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFSFE 191
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + LA+ ++ + DV E + KTA
Sbjct: 192 HMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLEFIHVHKTA 251
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 252 ALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSTELGKTAGKDLV 311
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 312 ADKVTYPKLM--------------------------------------GIEKSREFAEEL 333
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + LR L+ + ++ R N
Sbjct: 334 KNDAVEQLRGFDQEKA-APLIALANYIAYRQN 364
>gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
Length = 327
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 11/317 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----YRGDNHVLL 67
+ V+ L+ RI + + ++ + +GGK LRP A + + D + L
Sbjct: 16 LLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKL 75
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKS 126
A +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F + T +
Sbjct: 76 ATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTAT 135
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L + + + GEL Q++ D T YL I KTA LFS A + G
Sbjct: 136 TPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGA 195
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
K G N+GIAFQ++DD+LDY G + + T L
Sbjct: 196 DQRTVALAKRIGQNVGIAFQILDDILDY-----SSGDQLNKPVLEDLATGVYSLPLLLAM 250
Query: 247 KREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +K ++ G++ S +++ ++ EN + A ++ +KAK + LP S
Sbjct: 251 QANSAAFKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAKAEINQLPAGS 310
Query: 306 WKKSLMEVVDFCLQRLN 322
+++L ++ L+R +
Sbjct: 311 SRRALTKLCQRLLKRSS 327
>gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
14931]
gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
14931]
Length = 328
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 11/317 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----YRGDNHVLL 67
+ V+ L+ RI + + ++ + +GGK LRP A + + D + L
Sbjct: 17 LLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKL 76
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKS 126
A +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F + T +
Sbjct: 77 ATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTAT 136
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L + + + GEL Q++ D T YL I KTA LFS A + G
Sbjct: 137 TPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGA 196
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
K G N+GIAFQ++DD+LDY G + + T L
Sbjct: 197 DQRTVALAKRIGQNVGIAFQILDDILDY-----SSGDQLNKPVLEDLATGVYSLPLLLAM 251
Query: 247 KREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +K ++ G++ S +++ ++ EN + A ++ +KAK + LP S
Sbjct: 252 QANSAAFKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAKAEINQLPAGS 311
Query: 306 WKKSLMEVVDFCLQRLN 322
+++L ++ L+R +
Sbjct: 312 SRRALTKLCQRLLKRSS 328
>gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1]
gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1]
Length = 320
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 13/320 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---------YRGDN 63
+ + + SDVE I + + L+ +GGKR+RP++TL A L + D
Sbjct: 4 AAFETRMREVLRSDVEFIAIIGEDLVTAGGKRVRPLVTLLAAQALGAGPDALATSHSWDE 63
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ-AFCMVI 122
+ L+ +E +H+A+LLHDD++DDS RRG+ A +GN SV+ GDF+L++ +
Sbjct: 64 LLRLSVCVELLHSASLLHDDLIDDSDKRRGQETAFRRFGNVVSVMSGDFMLARLLGELSG 123
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S A A + EGE+ Q ++ D + E+Y VI KTA L A + ++
Sbjct: 124 MPGSPALTRAFGQAASVICEGEVLQFQVASYADYSFENYFQVIHGKTAALLELAAQAPAM 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G +S R AL ++G G+AFQ+ DD+LD GE ++GK +G D R GK T PV+
Sbjct: 184 LLGADDSARDALSTFGREYGMAFQMQDDLLDLLGEEAQIGKPVGGDLREGKATYPVLCL- 242
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + ++ + + R+ R T + A +L LP
Sbjct: 243 --LGGPHDAEVRAILERRAGEDGDVARMIALARQERTDDCTREEIRRRARLAIAALDALP 300
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S + +L + + L R +
Sbjct: 301 PSPARTALAALAERELNRTH 320
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 60/342 (17%)
Query: 2 KMLEDLTLKDMEK--------VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLA 52
+ ++++ D +K VN + K I I + ++Y + +GGKR+RP+L +A
Sbjct: 84 EQVKNVVEFDFDKYMHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIA 143
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVG 110
++ + + ACAIE IHT +L+HDD+ D+ LRRGK V+G T+++ G
Sbjct: 144 ACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAG 203
Query: 111 DFLLSQAFCMVIETKSQEALEALS----------LVACTLAEGELRQLSLSKNLDVTEED 160
D LLS AF V + S+ + + + G++ + + + E
Sbjct: 204 DALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLET 263
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
V KTAVL ++ +++ G + + Y +G+ FQ+VDD+LD E
Sbjct: 264 LEWVHIHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEE 323
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G+D + K T P ++ L
Sbjct: 324 LGKTAGKDLISDKATYPKLM--------------------------------------GL 345
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + K L C + L + D+ R N
Sbjct: 346 EKAKEFADELLNRGKQELSCFDPTKA-APLFALADYIASRQN 386
>gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 10/326 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ ++ L +N I K+ + + + + Y++ GGKRLRP L L M
Sbjct: 1 MQQIQQLQNS----INQYISNKKYGTTPVELYEPIYYIMALGGKRLRPCLLLMACDMFGG 56
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE H TL+HDD++D + LRRGK W ++L GD ++ +A
Sbjct: 57 DVQQALAPALAIEVFHNFTLMHDDIMDKAPLRRGKPTVHEKWNANVAILSGDVMMVEANK 116
Query: 120 MVIETKSQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++++ + + A + EG+ ++ VT ++Y+++I+ KTAVL + A
Sbjct: 117 LIMQVDDRILRPVLDVFNDTAVGVCEGQQIDMNFETLTHVTIDEYINMIRLKTAVLVAGA 176
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ +L+ G ++ L S+G LGIAFQL DD+LD G+ + GK +G D + K T
Sbjct: 177 LKMGALVGGADDAEASLLYSFGEQLGIAFQLQDDILDVYGDPKKFGKQVGGDIISNKKTY 236
Query: 237 PVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+I A + I+ + + +E + I + E Y ++A
Sbjct: 237 LLIKAMELAKGETLTELNYWISATEFNGIEKVTAVKNIYNQLNIREHAEAEMNRYAEQAI 296
Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQR 320
+ + + K L E D L R
Sbjct: 297 LNFEKINLPNERKVILKEFADMLLVR 322
>gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
Length = 327
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 12/323 (3%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDN 63
L ++ VN I +RI + + + +GGK LRP L L T+ + +
Sbjct: 10 LISTQLKAVNQCIQERIDCQNAELHTALLTMANNGGKYLRPALLLLTSQIFTPSSRNDER 69
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ LA +IE +H ATL+HDD++DDS RRG V+ + +G T+V GD L + F +++E
Sbjct: 70 LIKLAASIEVLHMATLIHDDIIDDSPERRGAVSIQARFGKDTAVYAGDLLFTVFFDLLLE 129
Query: 124 TKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + +GEL Q+ NL T +DYL ++ KTA LF A + +
Sbjct: 130 AIPASPYLQVNARAMRQILDGELGQMDQRFNLQQTLDDYLANVRGKTAALFKLAAQEGAY 189
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A + ++G LGIAFQ++DD+LDY GK + + T L
Sbjct: 190 FAAATTEQVASAAAFGQQLGIAFQMLDDILDYT-----GGKKLNKPVLEDLATGVYSLPL 244
Query: 243 QRGTKRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + +++ ++++ + A+ + A + Q A L
Sbjct: 245 LMALETPAAAEQIKPLLAKERQLTAPDIQRVQQDVIAGGAVEKSRQLATQFTQGALTELT 304
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP + + L ++ + L+R N
Sbjct: 305 KLPATKARLFLQQMTNRLLKRSN 327
>gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11]
gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 326
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH 64
++ V L+++R+ + + I ++ GGK +RP L L A + +
Sbjct: 11 IQNKLKDVQALMIERLKINNQEIEVALQKFASRGGKMVRPALFLLFAGIVPNGSKDEEKL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET
Sbjct: 71 IKIAASLEMLHSATLIHDDIIDDSPLRRGMPSVESQFGKDVAVYAGDFVYTVYFELLIET 130
Query: 125 KS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + +GEL Q+ + + + T Y+ I KTA L S +
Sbjct: 131 MNGTSFVAKNAQSMKRILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA +
Sbjct: 191 AGGDKKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLARE 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ K+S + ++ E + + A + A + ++ LP+
Sbjct: 251 VNEAAIAPY---LEAPEKLSRQECLDLAELVTELGGITGSLLVAGRLTELALNEIKKLPE 307
Query: 304 SSWKKSLMEVVDFCLQR 320
S ++ L E L+R
Sbjct: 308 SPNRQILEEATQILLER 324
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 87 DSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAACELVGGDVSVAMPAACAV 146
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK +G +VL GD LLS AF V + +
Sbjct: 147 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGDALLSFAFEHVAVSTVGAS 206
Query: 130 LEALSL---------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + L G++ ++ DV + ++ KTAVL AA+ +
Sbjct: 207 PDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLEYIHVHKTAVLLEAAVVLG 266
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + + L+ + + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 267 AILGGGTDEEVERLRKFAICIGLLFQVVDDILDVTKSSVELGKTAGKDLVADKVTYPKLM 326
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + A A + LR
Sbjct: 327 --------------------------------------GLEKSREFAEKLRDDAVEQLRV 348
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L+ + + R N
Sbjct: 349 FDQVKA-APLIALAHYIAYRQN 369
>gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 128 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM++G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 188 AEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + E ++ I + E + Y A +SL +
Sbjct: 248 KQHAELNRWLNAEAFQPSEKIEAVTEIYNQLNIRNICESKMREYYTFAMESLAAVAVAED 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406]
gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga
hutchinsonii ATCC 33406]
Length = 325
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 13 EKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ ++ I + + + ++Y++ GGKR+RP+LT+ + + +N + A A+
Sbjct: 10 KDISKAISKAEFGKEPTELYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNAAIAV 69
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E H TL+HDD++D++ LRRGK W ++L GD +L +A+ ++ + +
Sbjct: 70 EVFHNFTLMHDDIMDNAPLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLMTIDEKYLKQ 129
Query: 132 ALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L T + EG+ ++ ++ +DY+++I+ KTAVL ++E+ ++
Sbjct: 130 VLDRFNETAAGVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFSMELGGILGDADE 189
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
L + G++ GI FQL DD+LD G+ GK +G D K T +I A ++ +
Sbjct: 190 KSCTYLNTVGISAGIGFQLKDDLLDVYGDAATFGKQVGGDILANKKTFLLIRALEKAAGK 249
Query: 249 EKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-----RCLP 302
K + + D IS + ++ I + +TE + A +SL
Sbjct: 250 TKKDLEKLLTDKTISDKAKIEGVTNIYDQLGIKEETEALIQQHFNTAIESLGKVKGSIFR 309
Query: 303 DSSWKKSLMEVV 314
K L+ ++
Sbjct: 310 KHYIKDYLLALI 321
>gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2]
gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 128 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM++G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 188 AEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + E ++ I + E + Y A +SL +
Sbjct: 248 KQHAELNRWLNAEAFQPTEKIEAVTEIYNQLNIRNICESKMREYYTFAMESLAAVAVAED 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LE+ +KV + K + +I ++Y +F+GGKRLRP+L L + M+
Sbjct: 4 RKLEEYIYLSQKKVEENLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKD 63
Query: 61 ---GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ LRRGK +V+G ++L GD LL+
Sbjct: 64 QIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 116 QAFCMVIETKSQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + + + + G++ ++ S +EE +
Sbjct: 124 LAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMH 183
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L A+ +L+A ++ V L+ YG NLG+AFQ+ DDVLD G+ ++GK+I
Sbjct: 184 LKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSI 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D + K T L +
Sbjct: 244 GKDIKEKKNTFVTFY--------------------------------------GLGKAQQ 265
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y +KA D ++ +S L+E+ ++ + R
Sbjct: 266 LVEHYSKKAIDVIKKYDNSE---LLIELTNYLINR 297
>gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205]
gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN + + + + ++Y++ GGKR+RP L L + + + ++ A A
Sbjct: 8 LSMVNEFLANLPYERKPKSLYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMNAVA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ LRRG W T++L GD +L A+ + + +
Sbjct: 68 LETYHNYTLLHDDLMDNADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQCDEKHLA 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + A + EG+ + DV EE+Y+ +I+ KT+VL + AL++ +++A
Sbjct: 128 KVLKLFTTTALEIGEGQQFDMEFENRNDVKEEEYIEMIRLKTSVLLACALKMGAILADAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L +G +G+AFQL DD LD G+ GK IG D + K T +I AF
Sbjct: 188 DEDAENLYKFGEQIGLAFQLQDDYLDVYGDTKVFGKEIGGDITSNKKTYMLINAFNHAND 247
Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + ++ + E + + E + + Y +++K L + +
Sbjct: 248 AQRAELQKWVDAKEFDRKEKVAAVTRLYNEIGIDKMAQDKIAYYFEQSKKYLDAVNVPAE 307
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L + ++R
Sbjct: 308 RKEELAKYAQKMMKRQ 323
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 139/333 (41%), Gaps = 51/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L++ +E++N I SD+E+ +++KY + +GGKRLRP+LT +
Sbjct: 2 NLKEYMNIRLEEINKTIDNVFDKSDIELENSFIEMLKYPLDAGGKRLRPILTCLACELFN 61
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ A A+E IHT +L+HDD+ +D+ LRRGK + +G ++LVGD LL+
Sbjct: 62 GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121
Query: 117 AFC-------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF + + + + G+ L + + + K
Sbjct: 122 AFQLLSKTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKKTG 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ A + + ++ + + YG +G+AFQ+ DD+LD + +GK +G+D
Sbjct: 182 AMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDE 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T L + A
Sbjct: 242 KEGKLTYVKQF--------------------------------------GLEGAKEEAKK 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+K+ + L+ +S K L+E+ ++ ++R +
Sbjct: 264 VIEKSIEYLKPYKESEAKNILIELANYIIERKS 296
>gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/320 (23%), Positives = 131/320 (40%), Gaps = 50/320 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KVN + + I + + + ++Y + +GGKR+RP+L +A+ ++ + ACA+E
Sbjct: 85 KVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVE 144
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK ++G T+VL GD LLS AF V
Sbjct: 145 MIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGDALLSLAFEHVATKTQNVPP 204
Query: 131 EALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L + ++ + V+ + ++ KT+ L AA+ ++
Sbjct: 205 QRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHHHKTSKLLEAAVVCGAI 264
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + ++SY +G+ FQ+VDD+LD +E+GK G+D K T P ++
Sbjct: 265 MGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKDLITDKATYPKLM-- 322
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L A KA + L
Sbjct: 323 ------------------------------------GLEKARQYAGELMAKAMNELSYFD 346
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ L + + R N
Sbjct: 347 YAKA-APLYHIASYIANRQN 365
>gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
Length = 342
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 26 LDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 85
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 86 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLK 145
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 146 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 205
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM++G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 206 AEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 265
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + E ++ I + E + Y A +SL +
Sbjct: 266 KQHAELNRWLNAEAFQPSEKIEAVTEIYNQLNIRNICESKMREYYTFAMESLAAVAVAED 325
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 326 RKKELKNLVKLLMYR 340
>gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319]
gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 150/316 (47%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ KVN I + + + +KY++ GGKR+RP L L + + + ++ + ACA
Sbjct: 8 LYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSPACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++DD+ LRRG+ + W T++L GD +L AF + + +
Sbjct: 68 LETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCSDKYLR 127
Query: 131 EA---LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + A + EG+ + DV EE+Y+ +I+ KT+VL + A+++ +L+A
Sbjct: 128 EVLKLFTTTALEIGEGQQYDMEFETRNDVKEEEYIEMIRLKTSVLLACAMKIGALLADAP 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++L +G +G+AFQL DD LD G+ GK IG D + K T +I AF +
Sbjct: 188 EEDAESLYKFGEQVGLAFQLQDDYLDVYGDPKVFGKKIGGDITSNKKTYMLINAFNKANA 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
R++ K + E + + + R Y ++A L + S
Sbjct: 248 RQRKELEKWVTVEHFNRDEKVAAVTKLYNKIGVDKLAIDRINYYFEEANKYLAAVKVSDE 307
Query: 307 -KKSLMEVVDFCLQRL 321
K+ L L R
Sbjct: 308 RKQELASYAQRMLHRQ 323
>gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
Length = 323
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 8/298 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ V Y++ GGKRLRP+L L + + + LA AIE H +L+HDDV+D +
Sbjct: 25 LYAPVNYIMELGGKRLRPILALMGYELFKADYRPALPLAYAIEIFHNFSLVHDDVMDAAP 84
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL----EALSLVACTLAEGEL 145
LRRG+ W ++L GD +L A+ ++ + + + + VA + EG+
Sbjct: 85 LRRGQATVHTKWNLNAAILSGDVMLIYAYDYLLRLDAPNRIAEIVKVFNRVAREVCEGQQ 144
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ DV+ +YL +I+ KT+VL + ALE++ L AG Q L +G N+GIAF
Sbjct: 145 LDIDFETRSDVSIPEYLRMIELKTSVLIAGALEMAGLAAGASMDDVQHLYEFGRNVGIAF 204
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+LD G+ E+GK IG D K T ++ A + +++ +N +VE
Sbjct: 205 QLQDDILDTFGDAAEVGKQIGGDIVQNKKTYLILKALELADGPDRDALFELMNTPTTNVE 264
Query: 266 -NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLMEVVDFCLQR 320
+ + I+ T+ + +A + L L P S+ + +L + L R
Sbjct: 265 AKIDQVKNILNHYNIRALTQRAKQEFQDQAFEHLGALSIPASN-RVALESLAHNLLDR 321
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ +N + + + I + ++Y + +GGKR+RP L LA ++
Sbjct: 76 DFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKRVRPALCLAACELVGGDE 135
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK +V+G +VL GD LL+ AF
Sbjct: 136 SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFE 195
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + LA+ ++ + +V E + KTA
Sbjct: 196 HIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHIHKTA 255
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D
Sbjct: 256 KLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLV 315
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 316 ADKVTYPKLM--------------------------------------GIEKSREFAEKL 337
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ L L+ + ++ R N
Sbjct: 338 NKEAQEQLAGFDPEKA-APLIALANYIAYRQN 368
>gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500]
Length = 417
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 30/333 (9%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---------------VEMIPDVVKYLIFSGGKRLRPML 49
L +D+ +++ I+ I + ++ + Y GKR+RP +
Sbjct: 58 YSLIEQDLNRMSLNIIDSITNGIQGSGEYAGGPTQLTHPLLKSIGTYYFEMKGKRIRPTV 117
Query: 50 TLATALML-------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
L A + E ++ + LA +E +HTA+L+HDDV+D + RR + +
Sbjct: 118 LLLLARAITSNDCPSEPISESQLKLAQVVEMLHTASLVHDDVIDGADTRREMASVNCAYS 177
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
N+ ++L G+FL ++ ++ ++ E +S + L +GEL Q+ K+ + E Y+
Sbjct: 178 NKLAILCGNFLTARTIVLLSTLRNHHVTELVSNIISDLVDGELMQI---KSNSTSFESYI 234
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
KTA LF+ ++++G ++ +G NLG+AFQ++DD+LD G +G
Sbjct: 235 RKTYLKTASLFANGCRSIAVLSGADANMTNMATEFGKNLGLAFQIIDDLLDVTGSSESLG 294
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K D G T PV+ A + E IN ++ A ++ ++ A+
Sbjct: 295 KPASVDMSLGLATAPVLFALEEYPDLEV-----LINRKFSESGDVDIANQLVLKSNAIEK 349
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
T+ A Y K+ + L LP S + L+ +
Sbjct: 350 TKSLAIEYCNKSIEFLMKLPQSQSRDLLITLTQ 382
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 13 EKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+K+N + + + +I + ++Y + +GGKR+RP+L +A+ ++ + +ACA+
Sbjct: 85 KKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMPMACAL 144
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +T++L GD LLS AF V +
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVT 204
Query: 130 LEALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L Q ++ DV D ++ KT+ L A++ +
Sbjct: 205 PGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGA 264
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 265 ILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLM- 323
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A +A++ L
Sbjct: 324 -------------------------------------GLERAKRFATELVAQAEEELSYF 346
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
S+ L + + R N
Sbjct: 347 GSSARVAPLYHLAKYIAYRQN 367
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + +KV+ + + I S I + ++Y IF+GGKRLRP+L LA +
Sbjct: 2 NFKEELKQWSQKVDEALDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +ACA+E IHT +L+HDD+ +D+ RRG+ V+G ++LVGD L + A
Sbjct: 62 NTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F ++ +T + ++ V +A+ + + + + + KT
Sbjct: 122 FELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LF A++ +++ G + AL Y +G+AFQ+ DD+LD G+ ++GK +G D
Sbjct: 182 GALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDI 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+N K T P I + + + A
Sbjct: 242 KNQKSTYPSIY--------------------------------------GIEEAKRMATE 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++++ + + L +++ F + R +
Sbjct: 264 AAAEAVNAIKIFNHKA--EFLQDIMHFIINRDH 294
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 294
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 83/334 (24%), Positives = 144/334 (43%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ + + V + + + D E+I + ++Y +F+GGKRLRP+L L++ +L
Sbjct: 1 MFKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGY 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSL----------SKNLDVTEEDYLHVIKSK 168
+++ + + ++ T S+N ++T E+ + + K
Sbjct: 121 EVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + IAG AL+ Y +G AFQ+ DD+LD GE ++GK +G D
Sbjct: 181 TGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T I L ++
Sbjct: 241 KEKGKFTFVNIF--------------------------------------GLEKSQEMVV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L + L E+ ++ ++R+N
Sbjct: 263 ELTQNAIKILDRF--GEKAEFLKELSNYLIERVN 294
>gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
Length = 325
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EKVN + + ++Y++ GGKR+RP+L L + + + D+ + A
Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ +
Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLK 128
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + + + T + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G
Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGAS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+ +G+AFQL DD LD G+ GKNIG D K T +I A
Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ K + E +K + + E + +Y + L + S
Sbjct: 249 IQRKELEKWIASTAFCPEEKIKAVTALYDKIGIGGICEEKINAYYIEGLSLLESIAVPSE 308
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L V + R
Sbjct: 309 RKEELKSFVCHLMNRK 324
>gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
GZfos37B2]
Length = 361
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/360 (21%), Positives = 131/360 (36%), Gaps = 40/360 (11%)
Query: 1 MKMLEDLTLKDMEKVNFLI-----LKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATA 54
M E K + V + +R +V I D V YL GK LRP + L +
Sbjct: 4 MNEFEKELAKRGDLVYEYLASARYQERFAPEV--IHDSVYLYLDGRRGKSLRPAVLLFSC 61
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ---------- 104
+ + A A E HT TL+HDDV+D +RRG + +
Sbjct: 62 GAAGGDEEIAIPAAAATEVFHTWTLVHDDVIDRDCMRRGGYTVHEEFRRRGVDLGYDGDK 121
Query: 105 --------------TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
LLS+ ++ L + + + +
Sbjct: 122 AAHYGTSLAILAGDVQQGWSVSLLSELAERGVDPAVVLHLIRMMETDVVIMLLSGQIFDV 181
Query: 151 SKNLDVTEEDYLHVIKSK--------TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ E I +A + +N + +++ + G
Sbjct: 182 QYSKAPIESLSEAKILGMLWRKTGALYEFAGAAGAMIGLSTTNRENELVRSISQFTGRCG 241
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
AFQL DD+L G+ ++GK +G D R GK TL V AF + +K + +
Sbjct: 242 TAFQLQDDILGVVGDTKKLGKTVGSDIREGKRTLIVYHAFTHADEAQKRCMSRILGNKNA 301
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S E + + I+ E ++ T A SY ++AK+ + +P S +K L+ ++ + R +
Sbjct: 302 SDEEISEVVDILSELGSIEYTRALADSYIEEAKEQIETIPGSRYKDLLLAWAEYMVSRES 361
>gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 371
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D ++ V+ + + + + I + ++Y + +GGKR+RP L LA ++
Sbjct: 79 SFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGDE 138
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
N + ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 139 SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFE 198
Query: 120 MVIETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ S + + + A L G++ +S + DV + + KTA
Sbjct: 199 HLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTA 258
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L AA+ + +L+ G + + L+ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 259 ALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELGKTAGKDLV 318
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ L + A +
Sbjct: 319 TDKATYPKLM--------------------------------------GLEKSREFAENL 340
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK+ L D L+ + D+ R N
Sbjct: 341 NKEAKEQLSGF-DLEKAAPLIALADYIAYRQN 371
>gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
Length = 307
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 13/295 (4%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
V+ I +V Y+I SGGKR+RP+L+L T L + LA IE+IH A+LLHDDVVD
Sbjct: 23 VKAILEVGSYIISSGGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDVVD 82
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+ RRG+++A LV+GN VL GD++ ++A + ++++ +V+ + +
Sbjct: 83 GADRRRGRLSANLVFGNDLCVLTGDYMYAKALWLYSRYGD---IKSIEIVSRAVMDMAQG 139
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
Q+ K++ + + ++ + G+ +G AFQ
Sbjct: 140 QVLELKSIGDIIDQETYFSIIDRKTGVLFGASMAVGALMAGREDYERFYQMGLKVGRAFQ 199
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
LVDD LDY G ++GK +G D R GK T P+I + + +
Sbjct: 200 LVDDALDYSGSEEKLGKPVGNDLREGKCTYPLISVMENLDTEAV--------KSSLRNSD 251
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ + + T A Y ++A LR L +++ K L +V ++R
Sbjct: 252 TAWIREKVIQLGGVKKTYQMARMYIEEALKELRQLMGENNAK-VLETLVLSVIER 305
>gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
Length = 317
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 4/307 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
L + S + + + Y GK +RP+L ML LA IE I
Sbjct: 14 FEKQFLFFLKSKILFLKKIKNYFFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELI 73
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTA+++HDDV+D+S+ RRG + +W N+ +V+ GD++ S++ + + S S
Sbjct: 74 HTASIIHDDVIDNSSFRRGFLTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFS 133
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ ++EGEL Q+ KN E I L + S + L
Sbjct: 134 NLILKMSEGELYQIDFIKNHK-FSEKNYKKIIFNKTALLISTCCEQSGKLLQKKHTLFFL 192
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
K G+ +G++FQ+ DD+LDY N +N+ K TLP I +F + + +EK +
Sbjct: 193 KKIGILIGLSFQIKDDLLDY---NNFNQQNLFLKLNETKITLPFIYSFNKASFKEKKWIL 249
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ N+ K KK + + + Y+ + KA L P++S KSL ++
Sbjct: 250 NLSNNKKNFFCFYKKLINFIFFLGGIEFSIYKMKLFTNKALIQLNNFPNNSANKSLKTLI 309
Query: 315 DFCLQRL 321
F + R
Sbjct: 310 FFFINRK 316
>gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
DSM 15434]
gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
DSM 15434]
Length = 368
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 88/357 (24%), Positives = 147/357 (41%), Gaps = 40/357 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
LE +E V +L+ + + E I +L +GGKRLRP+LTL TA + + +
Sbjct: 11 ELEGRISPALEAVETRLLQVVNNADETINPPTSHLAEAGGKRLRPVLTLLTAQLGDPQTA 70
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G+ A+E H ATL HDDV+DD+ LRRG +A+ VWGN ++L GD L+++A
Sbjct: 71 TGEKVRDAGVAVELTHIATLYHDDVMDDAPLRRGAPSAQTVWGNSAAILTGDVLVARASQ 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + L L G+L + Y+ V+ KT L + +
Sbjct: 131 LVAALGPEAVLAHAKTFER-LCMGQLHETLPRPVGTDPVAHYIQVLADKTGSLIAVSARY 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ + ++ +G +G+AFQL DDV+D + GK G D R G T+PV+
Sbjct: 190 GAMLTEAGEETERIVEEFGEKIGVAFQLADDVIDLTSDSETTGKTPGTDLREGVETMPVL 249
Query: 240 LAFQ-----RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
L Q ++ + + L +RE+ L T A ++ +A
Sbjct: 250 LLRQALAAGELDAAGQSILSTLSSGDLQDDAVLGDVVARLREHPVLARTREMAMAWADQA 309
Query: 295 KDSLRCLPD-------------------------------SSWKKSLMEVVDFCLQR 320
L L + ++++ + + R
Sbjct: 310 VAVLGGLEETVVTGTRERLAAAGTQGAQAEAAVADARVRVGQVREAMEQFARLLVDR 366
>gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 324
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N + +I E + + ++Y++ GGKR+RP+L L + + + A
Sbjct: 8 LDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T++L GD +L AF V +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVIDLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R
Sbjct: 188 AVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKRIGGDILCNKKTYMLIKALERANG 247
Query: 248 RE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + + E + I + E + Y A +SL + +
Sbjct: 248 EQLEELNRWLNAENCQPAEKIAAVTEIYNQLTIRSVCENKMREYYTLAMESLEAVAVAEE 307
Query: 307 -KKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 KKKELKNLVKLLMYR 322
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 127/321 (39%), Gaps = 52/321 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KVN + I + I + ++Y + +GGKR+RP+L +A+ ++ + AC++E
Sbjct: 85 KVNKALDDAIPMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACSVE 144
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK + +G T+VL GD LLS AF V
Sbjct: 145 MIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSLAFEHVASKTKDVTP 204
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSL 182
+ + L + ++ + + + KT L AA+ ++
Sbjct: 205 QRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHNHKTGKLLEAAVVCGAI 264
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I G + +++Y LG+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 265 IGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGKTAGKDLVTDKATYPKLM-- 322
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L A KA D L
Sbjct: 323 ------------------------------------GLEKARELAGELVAKAMDELSYFD 346
Query: 303 DSSWKKS-LMEVVDFCLQRLN 322
+ K + L ++ R N
Sbjct: 347 --AAKAAPLYHFANYIAHRQN 365
>gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
Length = 324
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 153/316 (48%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++KVN I + + +KY++ GGKR+RP+L L + + ++ + AC
Sbjct: 8 LDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQACG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ LRRG W ++L GD +L AF + +
Sbjct: 68 LETYHNYTLLHDDLMDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIASGDPAQLK 127
Query: 131 ---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
++ A + EG+ + DVTE +Y+ +I+ KT+VL + AL++ +++A
Sbjct: 128 ALLNLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACALKMGAILAEAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ + GK IG D + K T +I AF + TK
Sbjct: 188 EEDARNLYIFGEKIGLAFQLQDDYLDVYGDPSVFGKQIGGDIISNKKTYMLINAFNKATK 247
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSSW 306
++N S IN E KA + + + Y +++K L + S
Sbjct: 248 EQRNELVSWINKESFKAEEKVKAVTRLYSEIGIDKMALDKIDCYFEESKKYLTKVSVSDE 307
Query: 307 -KKSLMEVVDFCLQRL 321
K+ L+ V ++R
Sbjct: 308 RKQELINFVQGLMRRK 323
>gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides
vulgatus ATCC 8482]
gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides
vulgatus ATCC 8482]
Length = 325
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EKVN + + ++Y++ GGKR+RP+L L + + + D+ + A
Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ +
Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLR 128
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + + + T + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G
Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGAS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+ +G+AFQL DD LD G+ GKNIG D K T +I A
Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ K + E +K + + E + +Y + L + S
Sbjct: 249 IQRKELEKWIASTAFCPEEKIKAVTALYDKIGIGGICEEKINAYYVEGLSLLESIAVPSE 308
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L V + R
Sbjct: 309 RKEELKSFVCHLMNRK 324
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 56/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + +V+ + + + E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKAYLKEQCARVDAALDSYLPRETELPHSLHKAMRYSVFAGGKRVRPILMLAACQAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IHT +L+HDD+ RRG V+G ++L GD LL++A
Sbjct: 62 DTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEA 121
Query: 118 FCMVIETKS-----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ A + + G++ + D+ ++
Sbjct: 122 FKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYIHT 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L AA+ +L+ G A+ YG G+AFQ+ DD+LD G E+GK+ G
Sbjct: 182 HKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P ++ L +
Sbjct: 242 SDQARGKATYPAVM--------------------------------------GLAAAKQE 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A + +A +L S L E+ + + R
Sbjct: 264 ATTMMDEAFKALEIF--GSEADPLREIARYIVTRK 296
>gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 324
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N + + + + + ++Y++ GGKR+RP+L L + + + A
Sbjct: 8 LDKINNHLSEIQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T++L GD +L AF V +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVIDLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R
Sbjct: 188 AADAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALERANG 247
Query: 248 RE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + D E + I + E + Y A +SL + +
Sbjct: 248 EQLEELNRWLNADNCQPAEKIAAVTEIYNQLTIRSVCENKMREYYTLAMESLEAVAVAEE 307
Query: 307 -KKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 KKKELKNLVKLLMYR 322
>gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
Length = 382
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 19/335 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
++D + ++++ ++ + + E++ ++ +Y K +RP L L TAL +
Sbjct: 48 EMQDKLGRYIQEMRETFIQDLTTSNELLTEISQYYAKRPSKLMRPRLILLTALAVNASVG 107
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V LA +E IH +LLHDDV+D+S RRG ++A +GN+ S+L GDF+L +
Sbjct: 108 ERDALPQQVRLAEVVEMIHVVSLLHDDVIDESDTRRGDMSAPARYGNKNSILAGDFVLGR 167
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLS---------KNLDVTEEDYLHVIKS 167
A ++ +A+ ++ V TL EGE+ Q S Y+ I
Sbjct: 168 AMSLIATLGHFDAMREIAGVVTTLVEGEIIQAEDSIALSDKARAGQAADQWGSYMERIFL 227
Query: 168 KTAVLFS--AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT LF+ + A+ YG LG+AFQ++DD LD++ +
Sbjct: 228 KTGSLFARALRSTAMLSGLPSDDERVLAVGDYGTELGLAFQIIDDALDFK--ETPVDSAG 285
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+ + N + + + ++RE AL T
Sbjct: 286 KPTGAVDLSLGLITAPVFYALEERPNELAPYVLRKCSEPGDTAEVVRLVRETSALQRTYA 345
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + QKA+D+L+ LP + + +L + L R
Sbjct: 346 LAAEHAQKARDALQALPSTLARDALEALTMKVLSR 380
>gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ + + V + + + D E+I + ++Y +F+GGKRLRP+L L++ +L
Sbjct: 1 MFKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGY 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSL----------SKNLDVTEEDYLHVIKSK 168
+++ + + ++ T S+N ++T E+ + + K
Sbjct: 121 EVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + IA AL+ Y +G AFQ+ DD+LD GE ++GK +G D
Sbjct: 181 TGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T I L ++
Sbjct: 241 KEKGKFTFVNIF--------------------------------------GLEKSQEMVV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L + L E+ ++ ++R+N
Sbjct: 263 ELTQNAIKILDRF--GEKAEFLKELSNYLIERVN 294
>gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 332
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 38/336 (11%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALM-----------LEYRGDNH- 64
+ + + SD+ + +Y G GKR+RP + + A +R +H
Sbjct: 1 MRRAVTSDIPALSTASEYFFKLGAEGKRVRPTVLMLMASAMTNGVMTSAAQGGWRETDHA 60
Query: 65 -------------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
LA E IH A+LLHDDV+D++A RRG A L GN+ ++L GD
Sbjct: 61 PAHQAPADVRRRQQRLAEIAEMIHVASLLHDDVLDNAATRRGLRALNLEVGNKLAILAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
FLL++A + ++ E +E LS V L GE+ Q++ + + Y+ KTA
Sbjct: 121 FLLARASVTLASLRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMDHYVKKTYYKTAS 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + + + +L+ G Q YG NLG+AFQ DDVLD+ G + +GK D +
Sbjct: 181 LIANSSKAIALLGGHGEESAQLAYDYGKNLGLAFQFQDDVLDFIGSESLLGKPTLGDLKE 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
G T PV+ A Q + + ++++A +++ ++ + T+ A +
Sbjct: 241 GIATAPVLFAVQEFPELSD-----LVERRFKHSGDVQRAHELVKSSQGIARTQELAREHC 295
Query: 292 QKAKDSLRCLPDSSWK------KSLMEVVDFCLQRL 321
A ++ LP S K ++L E+ ++R
Sbjct: 296 DLAIAAIDRLPASESKYAMHCRRALKELAKRAVERS 331
>gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606]
gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606]
Length = 323
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ KVN + K R + D VKY++ GGKR+RP+L L + + ++ ++ AC
Sbjct: 7 LVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMPACG 66
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ +RRG W T++L GD +L A+ + +
Sbjct: 67 LETYHNYTLLHDDLMDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQCSQIYLS 126
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L T + EG+ + DVTE +Y+ +I+ KT+VL + AL++ +++AG
Sbjct: 127 DVLHTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLLACALKIGAILAGAS 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D K T +I A+
Sbjct: 187 KQDQDYLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKKIGGDIICNKKTYMLINAYNLANS 246
Query: 248 REKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + + E + I + + + +++K L + D
Sbjct: 247 EQRRELQHWMEAETFNNDEKVAAVTAIYNKVGVDKLANEQITHFFEESKKYLDAVQVDDK 306
Query: 306 WKKSLMEVVDFCLQRL 321
K L V + R
Sbjct: 307 RKTELRHYVQNMMHRT 322
>gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 336
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 151/316 (47%), Gaps = 3/316 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L L D+ + I K + + ++L+ GKRLRP+ + +
Sbjct: 14 LAELRRLLDGDLGDIEREIAKVGLDGETPA-HRSARHLLGLNGKRLRPICVALASHIGSG 72
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E +H ATLLHDDVVD RRG AAR+++GN S+ GD+LL A
Sbjct: 73 FNDAARTFAVAVELVHNATLLHDDVVDLGDRRRGADAARVIYGNAASIFGGDYLLLDALS 132
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + LE + LV + E QL+ + + +Y ++ KTA LF A+
Sbjct: 133 KIQAVGMTDVLERVLLVIKEMVVAEALQLASRGRVRTSTSEYFQIVDGKTASLFRWAMFA 192
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ GV + +AL+S+G +LG+AFQLVDDVLD+ G+ GK + D R GK T P++
Sbjct: 193 GARAGGVNEPLCKALESFGTSLGVAFQLVDDVLDFAGDPEATGKALLTDLREGKMTYPLL 252
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
LA +R + ++ L ++ IM E R + D A A S+
Sbjct: 253 LAMERDRELTPALEAHCASEDTAVEPELGRRIAQIMVEKRVVDDCLELASRLCGDAVRSI 312
Query: 299 RCLPDSSWKKSLMEVV 314
LP+S K +L V
Sbjct: 313 EPLPESPAKAALEGVA 328
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + K + I + ++Y + +GGKR+RP L +A ++ + + ACA+
Sbjct: 6 QAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAM 65
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+HDD +D+ LRRGK V+G T+VL GD LL+ AF + +
Sbjct: 66 EMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTGVP 125
Query: 130 LEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + V L + ++ ++ + V E +V KTAVL +++
Sbjct: 126 ADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVCG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G L Y N+G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 186 AILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKATYPKLL 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ A +KAKD L
Sbjct: 246 --------------------------------------GLEKSKAFAEELTRKAKDQLSV 267
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L+ + D+ R N
Sbjct: 268 FDQQKA-APLLGLADYIAYRQN 288
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + K + + I + ++Y + +GGKR+RP L +A ++ D + ACA+E
Sbjct: 110 VNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEM 169
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---- 127
IHT TL+HDD +D+ LRRGK +G T+VL GD LLS AF + + S+
Sbjct: 170 IHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKTVES 229
Query: 128 ------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
S+ + L G++ ++ + V + ++ KTAVL ++ +
Sbjct: 230 ERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHKTAVLLECSVVSGA 289
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + + Y +G+ FQ+VDD+LD E+GK G+D + K T P ++
Sbjct: 290 IIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEELGKTAGKDLISDKATYPKLM- 348
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A KAK+ L
Sbjct: 349 -------------------------------------GLEKAKEFAVELVNKAKEELSYF 371
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
K + L+ + D+ R N
Sbjct: 372 D--PVKAAPLLGLADYIAFRQN 391
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 78/329 (23%), Positives = 131/329 (39%), Gaps = 49/329 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++V + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 20 DFAAYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDA 79
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+HDD+ +D+ LRRG V+G ++L GD LL++AF
Sbjct: 80 ALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAFE 139
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L V L+ + + E + + KT
Sbjct: 140 MVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEYIHLHKTGA 199
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + + +LIAG ++ AL +Y +G+AFQ++DD+LD +GK G+D
Sbjct: 200 LLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTA 259
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA +
Sbjct: 260 DKTTYPKLL--------------------------------------GLEESRQRADALV 281
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK +L + L+ + D+ R
Sbjct: 282 AEAKQALEPFNSNGSAAPLLALADYITSR 310
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 137/334 (41%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + E V+ + + + E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKQYLKQKCELVDQSLERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IHT +L+HDD+ +D+ RRG V+G T++L GD LL++A
Sbjct: 62 ALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEA 121
Query: 118 FC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F A + + + G++ + D+ ++ K
Sbjct: 122 FILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ G AL Y +G+AFQ+ DDVLD G E+GK+ G D
Sbjct: 182 TGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P ++ L ++ RA
Sbjct: 242 QARGKATYP----------------------------------ALV----GLEASKRRAE 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A +L + + + L + + ++R +
Sbjct: 264 ELVQIALTALEPFDERA--EPLRAIASYIVKRKS 295
>gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 51/331 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L D + ++ + + + ++ E I ++Y IF+GGKR+RP+L LA A
Sbjct: 4 QSLNDYITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ ++ ACA+E +HT +L+HDD+ +D+ LRRGK + +G ++L GD LL++
Sbjct: 64 GLAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTE 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQ-------LSLSKNLDVTEEDYLHVIKSKT 169
AF ++ + E V A G ++ ++E + V + KT
Sbjct: 124 AFAVIAQVDDTERYTVRDYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVYEGKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L + AL + A S +AL +G NLG+AFQ++DD+LD ++GK G+D
Sbjct: 184 AALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGKDV 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P ++ L A
Sbjct: 244 NSQKSTCP----------------------------------ALI----GLDGARSEAKC 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q A D+L P+ + L+E+ ++ L R
Sbjct: 266 RTQAALDALMIFPE-ERRARLVELANYLLNR 295
>gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
Length = 325
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 152/317 (47%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + +L+ + D + I + L+ SGGK LRP + +
Sbjct: 12 VEPQLTALQDYLLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNATTPAQLQA 71
Query: 68 -ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAFCMVIETK 125
A AIE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + ++ T
Sbjct: 72 GAAAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLQSTT 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG
Sbjct: 132 DRSLIQNHIDAMRRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAG 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
SV + G+ +G A+Q++DD+LDY G+ + K + ED R+G +
Sbjct: 192 APQSVIDHTREIGIAIGCAYQMLDDILDYAGDPKKTQKPVLEDLRSGVY---SLPLLLSL 248
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++F K +++E++K ++ + + + A Y +A ++ LP S
Sbjct: 249 SHAPRDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLARDYTDRALTLIQQLPAGS 308
Query: 306 WKKSLMEVVDFCLQRLN 322
++SL ++ L+R +
Sbjct: 309 AQQSLEQLTRLLLRRDH 325
>gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 380
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 134/322 (41%), Gaps = 11/322 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V +L+ SDV I + ++L+ +G KRLRP+L L A + V
Sbjct: 20 VRAGLAAVEAGLLEATKSDVPFITEAAQHLVRAGAKRLRPLLVLLAARFGDPDAPGVVPS 79
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A +E H ATL HDDV+DD+ RR A W N +VL GDFL ++A ++
Sbjct: 80 AVVVELTHLATLYHDDVLDDADARRRTPATDANWDNSVAVLTGDFLFARA-SHLLADLGP 138
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
EA+ + G++ + + E YL V+ + L + + + +L +G
Sbjct: 139 EAVRIQADAFRQQVTGQILETAGPSGDRDPIEHYLEVLAGRAGSLIAVSGRLGALASGAG 198
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR---NGKPTLPVILAFQR 244
V L YG LG+A +L +DVLD G G G TLPV+ R
Sbjct: 199 REVAGVLARYGERLGVACRLAEDVLDIAEAGGAGGVPRGHPGAALREGFATLPVLYLRAR 258
Query: 245 GTKREKNFWKSTIN------DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ K +A R + AL A Y ++A+ +L
Sbjct: 259 AEATGSPEDRELCELLTTELTNKTDETRYAEALRRFRAHPALEQARVAADRYAEEARAAL 318
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP + +++L ++ + + R
Sbjct: 319 APLPACAARRALEDLCE-VVTR 339
>gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
Length = 342
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 26 LDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATA 85
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + +
Sbjct: 86 IEVYHNHTLLHDDLMDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLK 145
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 146 EVMDLFSLTTLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 205
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM++G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 206 AEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 265
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + E ++ I + E + Y A +SL +
Sbjct: 266 KQHAELNRWLNAEAFQLSEKIEAVTEIYNQLNIRNICESKMREYYTFAMESLAAVAVAED 325
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 326 RKKELKNLVKLLMYR 340
>gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
sp. BAL39]
gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
sp. BAL39]
Length = 322
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 6/313 (1%)
Query: 13 EKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E ++ I I + E + + Y++ GGKR+RP L L +A + + A AI
Sbjct: 9 EFIDQAIQNIIYPAQPERLYLPISYIMSLGGKRIRPALVLMSADLFAADVHQVMPAALAI 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QE 128
E H TL+HDD++D++ LRRGK WG ++L GD ++ +A + + ++
Sbjct: 69 ETFHNFTLIHDDIMDNAPLRRGKATVHEKWGVNNAILSGDVMMVEANKHLAMLDAAVLKD 128
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
ALE + A + EG+ + V+ +Y+++I+ KTAVL A+++ + +A
Sbjct: 129 ALETFNSTAQGVCEGQQLDMEFESRDQVSIPEYINMIRLKTAVLLGGAMKLGAQVARATK 188
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
S + L ++G NLGIAFQL DD+LD G+ + GK +G D K TL ++ +
Sbjct: 189 SQAEQLYAFGENLGIAFQLQDDILDVYGDPEKFGKQVGGDIIANKKTLLLLKLKELTNPA 248
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+++ + + + + ++K ++ + +Y +A +L L S +K
Sbjct: 249 DEDLLEDLMTYTNL-AQKIEKMRMLYDKYNIRELAMAEMSAYADQAFQALSELEVSEDRK 307
Query: 309 S-LMEVVDFCLQR 320
S L + + R
Sbjct: 308 SELDLLAKALMNR 320
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + + V+ + + + E I + ++Y + +GGKRLRP+L LAT ++
Sbjct: 16 DLKAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTI 75
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LLS AF
Sbjct: 76 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V + V L ++ L LD+T E + KT
Sbjct: 136 FVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLTFIHTHKTG 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + ++ L Y N+G+AFQ++DD+LD E+GK+IG+D +
Sbjct: 196 ALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELGKSIGKDVQ 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + + +++ +A
Sbjct: 256 AQKATYPSLW--------------------------------------GIEESKAQAQKL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L + + + F + R +
Sbjct: 278 VDEAIAQLVLY--GEKAEPIRAIAQFIVSRTH 307
>gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 368
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L VN + + + + + ++Y + +GGKR+RP+L +A ++
Sbjct: 76 NFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGDE 135
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G ++L GD LL+ AF
Sbjct: 136 ATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAFE 195
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + LA+ ++ + DV E ++ KTA
Sbjct: 196 HMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTA 255
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G N + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 256 ALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLV 315
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L + + A
Sbjct: 316 ADKLTYPKLL--------------------------------------GIEKSRELAEQL 337
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ AKD L L+ + ++ R N
Sbjct: 338 NKDAKDQLSGFDPDKA-APLIALSNYIAYRQN 368
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L VN + + + + + ++Y + +GGKR+RP+L +A ++
Sbjct: 16 NFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGDE 75
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK V+G ++L GD LL+ AF
Sbjct: 76 ATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + LA+ ++ + DV E ++ KTA
Sbjct: 136 HMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTA 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G N + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 196 ALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLV 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L + + A
Sbjct: 256 ADKLTYPKLL--------------------------------------GIEKSRELAEQL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ AKD L L+ + ++ R N
Sbjct: 278 NKDAKDQLSGFDPDKA-APLIALSNYIAYRQN 308
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 131/333 (39%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
L+ VN + + + I + ++Y + +GGKR+RP+L +A + M+
Sbjct: 34 DLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGT 93
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A A+E IHT +L+HDD +D+ LRRGK +G T+VL GD +LS AF
Sbjct: 94 QEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAF 153
Query: 119 CMVIETKSQEALEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + E + + L G++ ++ V + ++ KT
Sbjct: 154 EHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRYIHIHKT 213
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L AA ++ G ++SY +G+ FQ+VDD+LD E+GK G+D
Sbjct: 214 GKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDL 273
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L A
Sbjct: 274 ISDKTTYPKLL--------------------------------------GLQGARDYAEE 295
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK L +S L+ + D+ R N
Sbjct: 296 LLAEAKQQLAAFGESRA-APLLALADYIAYRQN 327
>gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT
5716]
Length = 328
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 147/317 (46%), Gaps = 11/317 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----YRGDNHVLL 67
+ V+ L+ RI + + ++ + +GGK LRP A + + D + L
Sbjct: 17 LLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKL 76
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKS 126
A +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F + T +
Sbjct: 77 ATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTAT 136
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L + + + GEL Q++ D T YL I KTA LFS A + G
Sbjct: 137 TPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGA 196
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
K G N+GIAFQ++DD+LDY G + + T L
Sbjct: 197 DQRTVALAKRIGQNVGIAFQILDDILDY-----SSGDQLNKPVLEDLATGVYSLPLLLAM 251
Query: 247 KREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +K ++ G++ S +++ ++ EN + A ++ +KA+ + LP S
Sbjct: 252 QANSAAFKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAEAEINQLPAGS 311
Query: 306 WKKSLMEVVDFCLQRLN 322
+++L ++ L+R +
Sbjct: 312 SRRALTKLCQRLLKRSS 328
>gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 253
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 124/237 (52%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + KD+ + + + I D+ + D + +GGKR+RP+ L Y
Sbjct: 3 LLDIYSRKKKDIAFIEKSLERSIDVDLPTLRDASLLYLKAGGKRIRPVFVLLAGEFGHYD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A +E IH A+L+HDDV+DD+ RRGK R W N+ ++ GD++ ++A +
Sbjct: 63 LERMKHIAVPLELIHMASLVHDDVIDDAETRRGKATVRSKWDNRIAMYTGDYVYAKALTL 122
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
V E K+ + +S ++ GE+ Q+ L T DYL IK KTA+L + + ++
Sbjct: 123 VTELKNPAIHQIMSKAMIEMSIGEMEQIRLFFEHGQTLRDYLRRIKRKTALLIAVSCQLG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ A + + L +G +G+AFQ+ DD+LD G ++GK G D + G TLP
Sbjct: 183 AMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVGTEKQIGKPPGSDIKQGNITLP 239
>gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
Length = 326
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 5/307 (1%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHT 76
L+ I + + V +I +GGK LRP L + E +A AIE +HT
Sbjct: 23 LMEDAIHLKNKPVEQAVLQMIHAGGKMLRPAYQLLFSSFGPEKDRKKATAIAAAIEMLHT 82
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSL 135
ATL+HDD+VD++ LRRG + R +GN +V GD+L F ++ S + S
Sbjct: 83 ATLIHDDIVDEAELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASSMKSLQMHSK 142
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
++ GEL Q+ N+D++ DYL I KTA LF+ + + + +G +
Sbjct: 143 SMESILNGELGQMDNRFNIDLSVADYLEAISGKTAELFALSCAIGAYESGTSRKFAEQAG 202
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G+ +G+AFQ++DD+LDY + ++GK + ED + G +LP
Sbjct: 203 KIGLAIGMAFQIMDDILDYTQDQQKLGKPVLEDVKQGVYSLP---LILALESDATRLRPL 259
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
G +S F ++ + + + A Y +A ++ LP ++ + L ++ +
Sbjct: 260 LEKRGNLSQAEQHLIFELVHDLGGVTRAQDFAKEYTDQALKLIKKLPATAERDQLAQLTE 319
Query: 316 FCLQRLN 322
L R +
Sbjct: 320 TILSRQS 326
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 70/331 (21%), Positives = 140/331 (42%), Gaps = 50/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ L +++VN + + + + I + ++Y + GKR+ P+L +A+ ++
Sbjct: 23 QFKEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDE 82
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + LACA+E +H +L+HDD +D+ LRRGK V+G ++L GD LLS AF
Sbjct: 83 ELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGDALLSLAFE 142
Query: 120 MVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + + S+ +V+ + ++ KTA
Sbjct: 143 HIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEYIHVHKTAK 202
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ +++ G ++ + L+ Y ++G+ +Q+VDD+LD E+GK G+D +
Sbjct: 203 LLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGKTAGKDLAS 262
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P ++ + + + A
Sbjct: 263 NKATYPKLM--------------------------------------GIDEAKKFAAELV 284
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK + DS+ L + D+ +R +
Sbjct: 285 EQAKKEIASF-DSAKAVPLFHLADYIARRQS 314
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 82/332 (24%), Positives = 136/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V + + + + E I + ++Y + +GGKRLRP+L L T +L
Sbjct: 18 DLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELLGGTL 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ +G ++L GD LL+ AF
Sbjct: 78 EMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLAYAFE 137
Query: 120 MVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
L V L G++ L D+T + + KT
Sbjct: 138 YAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHTHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG Q L Y N+G+AFQ++DD+LD E+GK G+D R
Sbjct: 198 ALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAGKDLR 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T P + L +++ +A +
Sbjct: 258 DQKATYPSLW--------------------------------------GLEESKKQAQNL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L P + + L + +F + R N
Sbjct: 280 VSGAIAQLT--PYGNKAEPLRAIANFIVTRNN 309
>gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
9]
gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
9]
Length = 278
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 117/280 (41%), Positives = 159/280 (56%), Gaps = 2/280 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA +
Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E
Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG
Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT +
Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ I G F + + AL T A
Sbjct: 241 LAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEA 278
>gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1]
gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1]
Length = 328
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 7/316 (2%)
Query: 12 MEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+ I + + + + + Y++ GGKR+RP+L+L M + A A
Sbjct: 11 LDKLEVFIQNQNFGESPKELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQASA 70
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---Q 127
IE H TL+HDD++D + LRRG W ++L GD +L +A+ +++ET+
Sbjct: 71 IEVFHNFTLMHDDIMDQAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEPALLP 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + + A + EG+ ++ V E+DYL++I+ KTAVL AL++ +++ G
Sbjct: 131 EIIRLFNKTAADVCEGQQFDMNFENQDHVNEKDYLNMIRLKTAVLLGCALKMGAILGGAS 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+N+GI FQL DD+LD + + GK +G D + K T +I A + +
Sbjct: 191 SDEAHRLYEFGVNVGIGFQLKDDLLDVFADQEKFGKQVGGDIISNKKTFLLIKAKELASG 250
Query: 248 REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-- 304
I + E + I + TE + SY + L +
Sbjct: 251 EIAQELDQWIAATEFDKEEKVNSVKAIYEKLGIRELTEKKMNSYFDAGFEQLENINSKYP 310
Query: 305 SWKKSLMEVVDFCLQR 320
S+ L ++ + R
Sbjct: 311 SYFNELKKMTVDLIHR 326
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 133/331 (40%), Gaps = 51/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+V + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 21 DFNAYLAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDP 80
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+H +DD LRRG+ V+G ++L GD LL++AF
Sbjct: 81 ALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFE 140
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L V L+ + + E + + KT
Sbjct: 141 MVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGA 200
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LIAG S +L++Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 201 LLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIA 260
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA +
Sbjct: 261 DKTTYPKLL--------------------------------------GLEESRQRAKALV 282
Query: 292 QKAKDSLRCLPDSSWKKS--LMEVVDFCLQR 320
++AK SL + K+ L+ + D+ + R
Sbjct: 283 EEAKASLAAFKPTEPAKASPLLALADYVIGR 313
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ ++V + + + + + + Y +F+GGKRLRP+L +A +
Sbjct: 2 DLKNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+N + ACA+E IHT +L+H +DD LRRG+ V+G T++L GD LL++A
Sbjct: 62 DIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEA 121
Query: 118 FCMVIETKSQEALEALSLVACTL-----------AEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ + + G++ + ++
Sbjct: 122 FVVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHA 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A++ +L+ G +AL +G G+AFQ+ DD+LD G+ ++GK+IG
Sbjct: 182 HKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLGKDIG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P +L L ++ R
Sbjct: 242 SDQERGKATYPAVL--------------------------------------GLSESIRR 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A Q+A +L L D + L ++ + + R +
Sbjct: 264 ATELHQQALKALEPLAD--AAEPLRQISHYIINRSS 297
>gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
Length = 346
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++N I + + + V Y++ GGKR+RP+L L + + A
Sbjct: 30 LERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPATG 89
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + + +
Sbjct: 90 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLK 149
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + + + T + EG+ + DV E+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 150 EVMDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGAS 209
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L +GMNLG+AFQL DD LD G+ GKNIG D K T +I AF+ +
Sbjct: 210 SEDAEQLYDFGMNLGVAFQLKDDFLDVYGDTAVFGKNIGGDILCNKKTYMLIKAFEHADE 269
Query: 248 REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++ + E + + E + Y ++A +SL + +
Sbjct: 270 EQLTRLNAWVDAVAFNPEEKVAAVTELYNRIGVKELCEKKMEEYCERAMESLLAVKVADE 329
Query: 307 -KKSLMEVVDFCLQR 320
K+ L ++ + R
Sbjct: 330 KKEELKNLMANLMHR 344
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 132/333 (39%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ V+ + K I + I + ++Y + +GGKR+RP L +A ++
Sbjct: 100 DFNEYMKSKAVAVDAALDKAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGSQ 159
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + ACA+E IHT +L+HDD +D+ RRGK V+G T+VL GD LLS AF
Sbjct: 160 DLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFE 219
Query: 120 MVIETKSQEALEAL----------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ S+ ++ + L G++ ++ + +V + + KT
Sbjct: 220 HIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKT 279
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
AVL ++ ++ G ++ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 280 AVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDL 339
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ L + A
Sbjct: 340 LTDKATYPKLM--------------------------------------GLEKAKEFAAE 361
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK+ L L+ + D+ R N
Sbjct: 362 LATRAKEELSSFDQIKA-APLLGLADYIAFRQN 393
>gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
13280]
gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
13280]
Length = 355
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 74/344 (21%), Positives = 132/344 (38%), Gaps = 25/344 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKR----ICSD-------VEMIPDVVKYLIFSGGKRLRPMLT 50
+ + + + + + + + + + GGKR+RP+L
Sbjct: 10 ESFVAYLKDRLPLIERALHEADAVAMSHEGAPTEDLDRYLYAPLAHFTAGGGKRVRPVLA 69
Query: 51 LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
L A + D + AIE +A L+HDD+ D S LRRG+ G ++ G
Sbjct: 70 LLGAEAVGGCADQALSCGVAIELFQSAALIHDDIADASELRRGEPCLYRTEGLGLAINAG 129
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR--------QLSLSKNLDVTEEDYL 162
D L++ F +V+ S A + ++ + + DVT +DYL
Sbjct: 130 DLALTRVFEIVLADGSLPAERRVRVLEELVRMERHTLEGQALDLGWARDGRWDVTSDDYL 189
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++I KTA A+ + +A G+ G+AFQL DD+L+ G+ +
Sbjct: 190 YMIDGKTAWYTVASPLYAGALAAGAEPDAVRGLIEVGLPAGLAFQLQDDLLNLVGDADAQ 249
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK+ D GK TL V+ A + E++ + L +A ++ +
Sbjct: 250 GKDFRSDITEGKRTLAVVWALEHLGGAERSELVELLESRTDDASRLARAVELIELGGGID 309
Query: 282 DTEYRAYSYGQKAKDSLRCLPDS-----SWKKSLMEVVDFCLQR 320
A +A+ R L + + L+ + DF + R
Sbjct: 310 KCRELAAEKTAEAQKRARELAECGVITTEAAELLVSMADFFINR 353
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 ISDFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + ++IAG + AL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ RA+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKRAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK ++ P K L+ + DF R
Sbjct: 270 LVEKAKKAIE--PWGPDAKYLISLADFITNR 298
>gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
Length = 324
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + + ++Y++ GGKR+RP+L L + + A A
Sbjct: 8 LDKINNYISEIQFTREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPAAA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T++L GD +L AF ++ S+
Sbjct: 68 IEVYHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPSEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + +VTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 128 EVMELFGLTTLEICEGQQLDMEFESRDNVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A R +
Sbjct: 188 AEDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADE 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+++ + D E ++ + + E + Y A +SL +
Sbjct: 248 KQREELDRWLNADDCQPAEKIEAVTGLYNQLNIRNVCENKMREYYTSAMESLAAVAVAEE 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
Length = 324
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N + +I E + + ++Y++ GGKR+RP+L L + + + A
Sbjct: 8 LDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T++L GD +L AF V +
Sbjct: 68 IEVYHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG
Sbjct: 128 EVIDLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R
Sbjct: 188 AVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALERANG 247
Query: 248 RE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ K + + E + I + E + Y A +SL + +
Sbjct: 248 EQLKELNRWLNAENCQPAEKIAAVTGIYNQLTIRSVCENKMREYYTLAMESLEAVAVAEE 307
Query: 307 -KKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 KKKELKNLVKLLMYR 322
>gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
Length = 354
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 2/310 (0%)
Query: 12 MEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ L+ +R + + + ++ +L +GGKR+RP+L L A + + A
Sbjct: 44 LADAERLLRERTRDASDDRVRELTGHLAATGGKRMRPLLVLLAAEFGDPGSEGVAQAAVV 103
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E +H A+L HDDVVD +A+R G +A +WGN+ + G++LL++ + +
Sbjct: 104 AELVHLASLYHDDVVDRAAVRHGAASANALWGNRAAAQGGNWLLARGARLSADLVPDALA 163
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ EG+L +L + Y V KTA L + +L V + AG +
Sbjct: 164 LNARTANR-IVEGQLLELVGPEPGADPVAHYFRVAAGKTAALLAMSLGVGAFQAGAPRAA 222
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
AL YG LG+AFQ+ DD+LD R GK G D G P+LPV+LA + +
Sbjct: 223 ADALVEYGEQLGLAFQIADDLLDLRSSEAASGKEQGRDLLAGVPSLPVLLAREGTDAGDA 282
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + +A + ++RA E + +A+ +L LP +++L
Sbjct: 283 ELRELLAAGPGAGEDWHGRALKLFSDSRAAARAETLMHQRLGRARAALGVLPPLPARRTL 342
Query: 311 MEVVDFCLQR 320
+ DF R
Sbjct: 343 DALCDFVALR 352
>gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + V+ + + + ++ E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IHT +L+HDD+ RRG+ V+G ++L GD LL++A
Sbjct: 62 DTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEA 121
Query: 118 FCMVIETKS-----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ AL + + G++ + N ++ ++
Sbjct: 122 FILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHT 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A+++ +++ G +A+ YG +G+AFQ+ DD+LD G ++GK+ G
Sbjct: 182 RKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P +L L +++ R
Sbjct: 242 SDEARGKATYPAVL--------------------------------------GLAESKRR 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A ++L + L E+ + + R +
Sbjct: 264 AQELLDLAIEALSPFDHRA--DPLREIARYIVSRKS 297
>gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter
irgensii 23-P]
gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter
irgensii 23-P]
Length = 340
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 13/329 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
K + L D+ L + S + + + + + Y++ GGKR+RP+LTL + +
Sbjct: 13 KKIRSL---DIAHYQKEFLTYLESKNWIHEPKNLYEPIDYILKLGGKRIRPVLTLMVSDI 69
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E H TL+HDD++D + LRRGK W +L GD +L
Sbjct: 70 FSGDFKKALPAALAVEVFHNFTLVHDDIMDAAPLRRGKPTVHEKWDTNRGILSGDAMLIL 129
Query: 117 AFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
A+ S + S A + +G+ + +VT +Y+++I+ KT+VL
Sbjct: 130 AYQYFENYDSIVFLKLAKLFSKTALEVCDGQQLDVDFETRSNVTIPEYINMIRLKTSVLV 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+AAL++ +++A + Q + +G+NLG+AFQL DD LD G+ GK +G D K
Sbjct: 190 AAALKMGAIVAETSDENAQLIYDFGLNLGLAFQLQDDYLDTFGDPKTFGKQVGGDIIENK 249
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
T + A + K + + K + + I N + SY +
Sbjct: 250 KTYLYLKALEVSGKEDIGKLRHFYKKKLKENAVKIGAVRRIFEMNDIPYLIKQEIESYTE 309
Query: 293 KAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
KA +L + KK L + + + R
Sbjct: 310 KAFATLTKMDLIEEDKKRLKDFGLWLMNR 338
>gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
Length = 325
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EKVN + + ++Y++ GGKR+RP+L L + + + D+ + A
Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ +
Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLK 128
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + + + T + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G
Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGGS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+ +G+AFQL DD LD G+ GKNIG D K T +I A
Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
++ K + E +K + + E + +Y + L + S
Sbjct: 249 IQRKELEKWIASTAFCPEEKIKAVTALYDKIGIGGICEEKINAYYVEGLSLLESMAVPSE 308
Query: 306 WKKSLMEVVDFCLQRL 321
K+ L V + R
Sbjct: 309 RKEELKSFVCHLMNRK 324
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
Length = 295
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 58/332 (17%)
Query: 9 LKDMEK----VNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D++ + L+ + + + + I + + Y + SGGKRLRP+LTL +A ++
Sbjct: 4 KEDLKTKSAYIEDLLKQYMPKEEGYQKTIFEAMNYSLSSGGKRLRPILTLESAKIIGGDV 63
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AIE IHT +L+HDD+ +D+ RRGK V+G+ + L GD LL+ AF
Sbjct: 64 KEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYAFE 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KSKTA 170
++++ + + L A + V E I +KTA
Sbjct: 124 IMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNKTA 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ + +++ Q + Y N+G+AFQ+VDD+LD G+ +GK +G D
Sbjct: 184 AMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDEKALGKPVGSDIE 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T P ++ L +++ A
Sbjct: 244 NHKSTYPSLI--------------------------------------GLDESKKVATDL 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AKDS+R + S + L ++ D+ + R +
Sbjct: 266 IKEAKDSIRKI--SGESRFLEDLADYIISRDH 295
>gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 417
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 94/340 (27%), Positives = 153/340 (45%), Gaps = 30/340 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
L ++ + + + ++V + +Y G GKR RP + L A L
Sbjct: 81 SLVADELSLLANKLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVHIPE 140
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 141 PTPTGVGDVVATELRARQQSIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVA 200
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ + + E Y+
Sbjct: 201 VLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMEYYMQKTY 260
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+AG V YG NLG+AFQL+DDVLD+ G +GK
Sbjct: 261 YKTASLISNSCKAIALLAGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSL 320
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D R+G T P++ A E ++ ++ G N+ A + ++R + T
Sbjct: 321 SDIRHGIVTAPILFAM-----EEFPQLRAVVDRGFDKPGNVDIALEYLGKSRGIQRTREL 375
Query: 287 AYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
A + A ++ LP++ +++L+++ + R
Sbjct: 376 AAKHANLAAAAIDSLPETDDEEVRKSRRALVDLTQRVITR 415
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
L++ ++ ++ I S + + D++KY + +GGKRLRP+LT +
Sbjct: 2 NLKEYMNIRLKDIDSEINNIFKSSSISLENNFL-DMLKYPLDAGGKRLRPILTCLACELF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ A ++E IHT +L+HDD+ +D+ LRRGK + +G ++LVGD LL+
Sbjct: 61 NGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV------IKSKT 169
+F ++ + L + A G + EE + KT
Sbjct: 121 HSFEILSNANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILHSKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ A+ V ++ + +N + + YG +G+AFQ+ DD+LD + +GK +G+D
Sbjct: 181 GAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDE 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T L + +A
Sbjct: 241 KEGKLTYVKQF--------------------------------------GLEGAKEKAIE 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A D L D+ K L+E+ ++ ++R +
Sbjct: 263 TSKEAIDYLNVYDDNEAKNILIELANYIVERKS 295
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + + + ++Y + +GGKR+RP L LA ++ + ACA+
Sbjct: 64 KLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALPAACAM 123
Query: 72 EFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+HDD+ RRG+ V+G ++L GD LLS +F +
Sbjct: 124 EMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKGVP 183
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSS 181
E + V L + + ++ + + + + + KTA L A++ +
Sbjct: 184 AERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVCGA 243
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G S + L+ Y +N+G+AFQ++DD+LD ++GK +D K T P +L
Sbjct: 244 ILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLAVNKTTYPKLL- 302
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L ++ A ++A L
Sbjct: 303 -------------------------------------GLEKSKQVADDLIKEAIQQLDGF 325
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
+ K + L+ + F R N
Sbjct: 326 D--AAKAAPLVALAKFIGYRQN 345
>gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
Length = 346
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++N I + + + V Y++ GGKR+RP+L L + + A
Sbjct: 30 LERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPATG 89
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + + +
Sbjct: 90 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLK 149
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + + + T + EG+ + DV E+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 150 EVMDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGAS 209
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L +GMNLG+AFQL DD LD G+ GKNIG D K T +I AF+ +
Sbjct: 210 SEDAEQLYDFGMNLGVAFQLKDDFLDVYGDAAVFGKNIGGDILCNKKTYMLIKAFEHADE 269
Query: 248 REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++ + E + + E + Y ++A +SL + +
Sbjct: 270 EQLTRLNAWVDAVAFNPEEKVAAVTELYNRIGVKELCEKKMEEYCERAMESLLAVKVADE 329
Query: 307 -KKSLMEVVDFCLQR 320
K+ L ++ + R
Sbjct: 330 KKEELKNLMANLMHR 344
>gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
Length = 324
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 77/299 (25%), Positives = 143/299 (47%), Gaps = 8/299 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---- 63
KDM +++ +IL + S ++ ++ GK LRP + D
Sbjct: 21 VQKDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFG-AFGPDADQKHDE 79
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVI 122
+A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L++ + +
Sbjct: 80 LQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLSE 139
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S ++ A + GE Q + + N+D++E++YL IK KT VLF A + +
Sbjct: 140 NAQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAY 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+G + + K +G LG AFQL DD+LDY + K + D ++G + P+I A
Sbjct: 200 ESGTKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFAL 259
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q + + ++ + L + ++ + + A Y +KA SL+ +
Sbjct: 260 Q--NDDNNHLHELVKMGKDLTQDQLHEIENLVNHLGGVERAQKLADQYTEKALASLKNI 316
>gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
Length = 326
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 7/317 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNH 64
K+++ V LI +R I + L +GGK LRP + + D
Sbjct: 11 IQKEIDAVVELIGQRANVRNSDIKAAIVDLSTAGGKYLRPAFFFFFSQFGDQEQKNRDQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IE 123
+A ++E +H ATL+HDDV+DDS LRRG+ + +G +V GDFL + F ++
Sbjct: 71 RQIAASLEILHMATLIHDDVIDDSPLRRGQKTIQTQFGKDVAVYTGDFLFTIFFELILES 130
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + GEL Q+ L N + E YL I KTA LF A + +
Sbjct: 131 MQDSPYMTINAKAMKQILIGELEQMELYFNQEQDVESYLTAISGKTAELFQLASQEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG V G ++G+ FQ++DD+LDY + K + ED NG +LP++LA +
Sbjct: 191 AGASQDVVSLAGRIGHHIGMTFQILDDILDYTADPKTFNKPVLEDLCNGVYSLPLLLAMK 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
K F ++ + + ++ + + + A Y +KA + LP
Sbjct: 251 ---KNPAAFKPLLDKQRDMTSADRLQVKELVLTYGGVEEAKALANKYTEKALADIEQLPK 307
Query: 304 SSWKKSLMEVVDFCLQR 320
+K L++V L+R
Sbjct: 308 IKAQKQLLKVTKELLKR 324
>gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 334
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 24/336 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ D+ + L+ + + SD ++ + + V LI SGGKRLRP++ + +
Sbjct: 2 NIHKQIGVDLASFDRLLREVVISDRDLSPPSVVLESVVNLINSGGKRLRPLMVMLGSRFG 61
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A +E++H A+L+HDD++D S +RRG QT+V +G++++++
Sbjct: 62 VSGHESAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIAR 121
Query: 117 AFCMVIETK--------------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
A L L+ + L GE QL N D+T E YL
Sbjct: 122 AIEWAAGHPGEESDGASEAVSEEDAYRLAELAALVTELCMGEYDQLHHRFNYDLTMEQYL 181
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KTA+L + L+ + A + L +G LG+AFQ+ DD+LD+ +G
Sbjct: 182 EKTRCKTALLMAHCLKAGAEAAKADARTAELLFQFGEALGMAFQIRDDLLDFTQSKETIG 241
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G D RNG TLPV K + ++ + + + + A
Sbjct: 242 KPAGADLRNGNITLPV----IYALNEPALAAKIRQLGPGSADADMDEVILRIAGSSATEQ 297
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+E A SY ++A+ + L D + L ++ + L
Sbjct: 298 SEELARSYAEQAQLMIGELADHPARCDLQALLHYFL 333
>gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 343
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 87/342 (25%), Positives = 159/342 (46%), Gaps = 23/342 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +LE L +++ ++K + +V E D V Y + +GGKRLRP++TL
Sbjct: 1 MDILEKLHNLYGHEIDEQLIKYLNREVSEDFKDTVIYQVSTGGKRLRPLITLTATRACGS 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +E IH +L++DD++D++ LRR K+ R +G+ ++L+G +
Sbjct: 61 DYKVALPAAAIVELIHNYSLIYDDIIDEALLRRNKLTVRAKYGDNAAILIGIWYREAIEE 120
Query: 120 MVIETKSQEALEA--------------------LSLVACTLAEGELRQLSLSKNLDVTEE 159
++ET+ + S L N +
Sbjct: 121 AILETRDPVSFARETARTIRAIDEGERLDILLEYSGRKDPYFVENRLGPRLLSNWESLYN 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
Y+ +I KTA L A+ ++ A +AL YG LG+AFQ++DD+LD G+V
Sbjct: 181 TYIKMISLKTAALIRASSVFGAMSAN-TPHCVKALSDYGTYLGLAFQVLDDILDIFGDVK 239
Query: 220 EMGKNIGEDFRNGK-PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ GK IG+D + K +++A + ++K S + I+ +++KKA I+ +
Sbjct: 240 KFGKEIGKDIKEHKLGNAVIVMALKELNDKDKEDLLSILGKAAITNDDVKKAVEIISKTN 299
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + A + +K++ SL L ++ + + L E++ F + R
Sbjct: 300 ARENASKMAMEFAEKSEKSLNELSNNEFVEDLREILRFTVTR 341
>gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 51/320 (15%)
Query: 15 VNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + D I + ++Y + +GGKR+RPML LA ++ N + ACA+E
Sbjct: 83 VNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAACAVEM 142
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+H +DD LRRGK V+G +VL GD LL+ AF + +
Sbjct: 143 IHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATTGVPPS 202
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + LA+ ++ L+ + N +V E + KTA L A++ + ++
Sbjct: 203 RILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAI 262
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + L+ + +G+ FQ+VDD+LD +E+GK G+D K T P +L
Sbjct: 263 LGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPKLL-- 320
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + A +AK L
Sbjct: 321 ------------------------------------GLEKAKEFAAELNGEAKQQLAAF- 343
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS L+ + D+ R N
Sbjct: 344 DSHKAAPLIALADYIANRQN 363
>gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 324
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++N I + + + V Y++ GGKR+RP+L L + + A
Sbjct: 8 LERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + + +
Sbjct: 68 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + + + T + EG+ + DV E+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 128 EVMDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + L +GMNLG+AFQL DD LD G+ GKNIG D K T +I AF+ +
Sbjct: 188 SEDAEQLYDFGMNLGVAFQLKDDFLDIYGDAAVFGKNIGGDILCNKKTYMLIKAFEHADE 247
Query: 248 REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + ++ + E + + E + Y ++A +SL + +
Sbjct: 248 EQLTRLNAWVDAVAFNPEEKVAAVTELYNRIGVKELCEKKMEEYCERAMESLLAVKVADE 307
Query: 307 -KKSLMEVVDFCLQR 320
K+ L ++ + R
Sbjct: 308 KKEELKNLMANLMHR 322
>gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + I + ++Y + +GGKR+RPML +A + + ACA+E
Sbjct: 77 VNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEM 136
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF + + E
Sbjct: 137 IHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSE 196
Query: 132 AL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + L G++ + DV E + KTA L ++ + ++
Sbjct: 197 RIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAI 256
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 257 VGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL-- 314
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A ++A++ L
Sbjct: 315 ------------------------------------GIDKSREFAEKLNREAQEQLAEFD 338
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 339 PEKA-APLIALANYIAYRDN 357
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 13 EKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+K+N + + + +I + ++Y + +GGKR+RP+L +A+ ++ + +ACA+
Sbjct: 85 KKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMPMACAL 144
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +T++L GD LLS AF V +
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVT 204
Query: 130 LEALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L Q ++ DV D ++ KT+ L A++ +
Sbjct: 205 PGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGA 264
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 265 ILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLM- 323
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A +A++ L
Sbjct: 324 -------------------------------------GLERAKRFATELVAQAEEELSYF 346
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
S+ L + + R N
Sbjct: 347 GSSTRVAPLYHLAKYIAYRHN 367
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 131/332 (39%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + I + ++Y + +GGKR+RPML +A ++
Sbjct: 81 NFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIAACELVGGTE 140
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AC++E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ +F
Sbjct: 141 SIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFE 200
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + LA ++ + DV E + KTA
Sbjct: 201 HIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTA 260
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G N + L+++ +G+ FQ+VDD+LD E+GK G+D
Sbjct: 261 ALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLV 320
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 321 ADKVTYPKLM--------------------------------------GVEKSREFAEKL 342
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A+D L L+ + ++ R N
Sbjct: 343 NKDAQDQLAGFDAEKA-APLIALANYIAHRQN 373
>gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola]
Length = 348
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 14/319 (4%)
Query: 18 LILKRICSDVEMIPDVVKYLI----FSG-------GKRLRPMLTLATALMLEYRGDNHVL 66
+ I + I +V Y +G GK +R LT+ A V
Sbjct: 30 ALRATIDTLGSRIRPIVGYHFGWLDLAGQPTDQGSGKMIRAALTVLAAEACGGDVQRAVC 89
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS--QAFCMVIET 124
A A+E +H +LLHDDV+D RRG+ G ++L GD LL+ A
Sbjct: 90 GAVAVELVHNFSLLHDDVMDGDLERRGRPTVWATLGVPAAILAGDVLLARGCAILEGDSE 149
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A E L+ TLAEG++ ++ ++ E+ L V ++KTA L S A E+ + ++
Sbjct: 150 HRTWATELLTETIATLAEGQMADVAFEHRTTISLEEALAVSEAKTAALLSCACELGAGLS 209
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G R+ L +G +LG+AFQLVDDVL G+ GK G D RN K ++PV A
Sbjct: 210 GGGAEARERLAKFGWHLGMAFQLVDDVLGIWGDPAATGKPAGSDLRNRKKSIPVAAAMNG 269
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ ++ + +A ++ TE + + A L L +
Sbjct: 270 TGAAAEELAAIYRGAEPLTDDMADRAAKLIESAGGRAWTEAEIDRHRRGAAAQLEALGLT 329
Query: 305 SW-KKSLMEVVDFCLQRLN 322
++ L+ + D+ R +
Sbjct: 330 EEQRRPLLALADYVAFRNH 348
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 83/329 (25%), Positives = 140/329 (42%), Gaps = 53/329 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
L K M VN + + + I + ++Y + +GGKR+RP+L +A ++ +
Sbjct: 94 LLSKAMA-VNEALDRAVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKLAM 152
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
ACA+E IHT +L+HDD +D+ RRGK V+G T+VL GD LLS AF +
Sbjct: 153 PTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAV 212
Query: 124 TKSQEALEALS----------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ S+ + + L G++ ++ N V + + KTAVL
Sbjct: 213 STSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHKTAVLL 272
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ ++I+G + + +K Y ++G+ FQ+VDD+LD E+GK G+D + K
Sbjct: 273 ECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLISDK 332
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ L + A +
Sbjct: 333 ATYPKLM--------------------------------------GLEKAKQFAVELLDR 354
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK++L C L+ + D+ R N
Sbjct: 355 AKENLSCFDPMKA-APLLGLADYIAFRQN 382
>gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative /
dimethylallyltransferase, putative / prenyl transferase,
putative [Arabidopsis thaliana]
gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 321
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 30/321 (9%)
Query: 25 SDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDNHVL---------------- 66
++V + +Y G GK+ R + L A L R ++
Sbjct: 4 AEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQR 63
Query: 67 -LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + K
Sbjct: 64 GIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALK 123
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ E + L+ L GE +++ S + + Y+ KTA L S + + +++ G
Sbjct: 124 NTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTG 183
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A
Sbjct: 184 QTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAM--- 240
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
E + ++ + N+ A + +++ + A + A ++ LP++
Sbjct: 241 --EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETD 298
Query: 306 ------WKKSLMEVVDFCLQR 320
+++L+++ + R
Sbjct: 299 NEDVKRSRRALIDLTHRVITR 319
>gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
Length = 335
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 5/325 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + V L+ + + D ++L+ +GGKRLRP+LTL TA + +
Sbjct: 12 DALAERLSGRVALVEELLRDAVTYADPIAHDASRHLVDAGGKRLRPLLTLLTAELGDGNR 71
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A +E H ATL HDDV+D + LRRG +A VWGN ++L GD L ++A +V
Sbjct: 72 REVIDAAAVVELTHLATLYHDDVMDSAPLRRGAPSAHEVWGNSVAILTGDLLFARASSIV 131
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G+L + + + E YL V+ KTA L + + +
Sbjct: 132 SGLGPEAVRIQAQTFER-LCLGQLHETVGPRPDEDPVEHYLQVLADKTASLIATSARFGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP---- 237
+ AG + V + + +G +G+AFQL DDV+D + + GK G D R G PT+P
Sbjct: 191 MFAGCRPDVVRTVTQFGEIVGVAFQLADDVIDLTSDGSVTGKTPGTDLREGVPTMPALLL 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
A Q + ++ + +L A +RE+ + T RA ++A
Sbjct: 251 RSRAAQTPAGSRDRDVVALLDSDLTADADLAVAVEALREHEVVTLTRRRAVELARQAVTE 310
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP K +L+ D + R +
Sbjct: 311 LGPLPAGPVKDALVAFADALVDRAS 335
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + VN + + + I + ++Y + +GGKR+RPML +A ++
Sbjct: 81 DFTAYVLGKAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAACELVGGDE 140
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 141 ETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFE 200
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + E + V LA+ ++ + +V E + KTA
Sbjct: 201 HIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEFIHLHKTA 260
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G L+ + N+G+ FQ+VDD+LD E+GK G+D
Sbjct: 261 ALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKELGKTAGKDLV 320
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L + + A
Sbjct: 321 ADKVTYPKLL--------------------------------------GIQKSREFAEQL 342
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ L L+ + ++ R N
Sbjct: 343 NNEAQAQLSGFDQEKA-APLIALANYIAYRDN 373
>gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
Length = 315
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 11/323 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MK++ +L ++ I + I S ++ +L +GGKR+RP L + L
Sbjct: 1 MKLISELLAQN----ERHIQRLIQSRHALLSAAAAHLFQAGGKRIRPTFVLLVSQALGGI 56
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA E IHTA+LLHDDVVD+++ RRG + N+ +VL GDFL +Q+
Sbjct: 57 SQSQQRLAEITEMIHTASLLHDDVVDEASKRRGIDTVNTRFSNRIAVLAGDFLFAQSSWY 116
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + E ++ +S + LAEGE+RQ S + YL KTA LF+ + + +
Sbjct: 117 LANLNNLEVVKFISKLISDLAEGEMRQTSTQFSTQFELWAYLEKSFYKTASLFACSAKAT 176
Query: 181 SLIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++ Y G +LGIAFQ++DDVLD G++++MGK + DF +G T P+
Sbjct: 177 CMLSNDHEDNHHHKNMYLLGQHLGIAFQIMDDVLDISGDISQMGKTLSADFVSGNLTAPI 236
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A + + ++ + ++ + + + A+ + Q A L
Sbjct: 237 LFALTQEAGLVTLLERECCYT-----QDAYQVRQMVWDTYGIEQAKDLAFEHMQAALACL 291
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
L S K +L ++ + + R
Sbjct: 292 ASLAPSEAKDALYDLANQMISRQ 314
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 ISDFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++A
Sbjct: 68 KPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + ++IAG + QAL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ RA+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKRAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK ++ P S K L+ + DF R
Sbjct: 270 LVEKAKKAIE--PWGSEAKYLISLADFITNR 298
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + I + ++Y + +GGKR+RPML LA ++
Sbjct: 59 DFKKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLAACELVGGHP 118
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AC+IE IHT +L+HDD +D+ LRRG +V+G +VL GD LL+ +F
Sbjct: 119 STAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFE 178
Query: 120 M---------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
A A + + L G++ + ++ E ++ KTA
Sbjct: 179 YLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTA 238
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 239 ALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGKDLV 298
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 299 ADKTTYPKLI--------------------------------------GIEKSREFAEKL 320
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ L DS L+ + ++ R N
Sbjct: 321 NREAQEQLVGF-DSDKAAPLIALANYIAYREN 351
>gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis]
Length = 634
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 90/347 (25%), Positives = 151/347 (43%), Gaps = 38/347 (10%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
L ++E V + + I +++ + +Y +G GKRLR + L A L
Sbjct: 111 ALVRDEIECVTERLRRDIFTEIPALERAAEYFFRAGAEGKRLRSTMLLLMASALAPAPAG 170
Query: 63 --------------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+A E IH A+LLHDDV+D + RRGK + ++G
Sbjct: 171 LDHLTVDTSPPAEHPPTVRRRQQRIAEITELIHVASLLHDDVIDAAGTRRGKKSLNALFG 230
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
N+ ++L GDFLL++A + ++ EA+ +S L GE+ QL+ + + Y+
Sbjct: 231 NKVAILAGDFLLARASVSLAALRNPEAILLMSQSLEHLVAGEILQLTADVEEAASMDHYM 290
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
KTA L + + +++ G A YG ++G+AFQLVDDV+DY +EMG
Sbjct: 291 RKTYCKTASLMANSCRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMDYTCSASEMG 350
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K D R+G T PV+ A E+ I +++ A ++ + L
Sbjct: 351 KPALNDLRSGLATAPVLYA-----AEERLELLPLIQRRFKEEGDVEAAQELVEGSSGLQR 405
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSW--------KKSLMEVVDFCLQRL 321
T A + ++A +L S ++ L+++ L R
Sbjct: 406 TRQLAAFHAEEA--ALAVQGMSPAASQHAAEHRQGLLQITQRVLNRK 450
>gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
nagariensis]
gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
nagariensis]
Length = 403
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 46/357 (12%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+ +++E V+ + + + + + +Y G GKRLRP L L + L
Sbjct: 51 SIVRQEVEIVSERLRHSVSTGIPALKTAAEYFFRHGMEGKRLRPSLVLLMSSALSPAVPP 110
Query: 63 --------------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+A E IH A+LLHDDV+DD+ RRG V+ V G
Sbjct: 111 PEYLQVDLRPAAEHAPELRRRQQRIAEIAELIHVASLLHDDVIDDAETRRGVVSLNNVMG 170
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
N+T++L GDFLL++A + ++ E + +S V L GE+ Q++ + + + YL
Sbjct: 171 NKTAILAGDFLLARASVSLAALRNSETVVLMSQVLEHLVSGEIMQMTATSEQLLDLDHYL 230
Query: 163 HVIKSKTAVLFSA------------ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
KTA L + V + G + V SYG +LG+AFQ+VDD
Sbjct: 231 AKTYCKTASLMANSSRSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVDD 290
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+LD G + +GK D R+G T PV+ A Q + I ++ A
Sbjct: 291 LLDLTGSSSVLGKPALNDLRSGLATAPVLFAAQEEPELRP-----LILRRFKQEGDVALA 345
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS----WKKSLMEVVDFCLQRL 321
+++ + L E A + + A D +RCLP S +++L+++ L R
Sbjct: 346 MTLIQRTQGLRRAEELAAHHAKIAADMIRCLPVAQSDHAEIAREALIQITHKVLTRK 402
>gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
F Lactobacillus Brevis Atcc 367
gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
F Lactobacillus Brevis Atcc 367
Length = 335
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + +L+ + D + I + L+ SGGK LRP + +
Sbjct: 14 VEPQLTALQDYLLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATPAQLQA 73
Query: 68 -ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAFCMVIETK 125
A AIE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + ++ T
Sbjct: 74 GAAAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 133
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG
Sbjct: 134 DRSLIQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAG 193
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
SV + G+ +G A+Q++DD+LDY G+ K + ED R+G +
Sbjct: 194 APQSVIDRTRDIGIAIGCAYQMLDDILDYAGDPKRTQKPVLEDLRSGVY---SLPLLLSL 250
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++F K +++E++K ++ + + + A Y +A ++ LP S
Sbjct: 251 SHAPRDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGS 310
Query: 306 WKKSLMEVVDFCLQRLN 322
++SL ++ L+R +
Sbjct: 311 AQQSLEQLTRLLLRRDH 327
>gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
94_M4241A]
gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 325
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDCQPRRALATLIDHAVS 322
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 70/334 (20%), Positives = 125/334 (37%), Gaps = 53/334 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ KVN + + + I + ++Y + +GGKR+RP+L +A ++
Sbjct: 73 DFKAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAACELVGGEE 132
Query: 62 DNHVLLACAIEFIHTATLLHDDVV---DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
N V ACA+E IHT +L+HDD+ R +VL GD LL+ +F
Sbjct: 133 SNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSLLAFSF 192
Query: 119 CMVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIK-SK 168
+ + + +++ ++ ++ + D L I K
Sbjct: 193 EYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQLEFIHIHK 252
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L AA+ + +++ G + L+ + +G+ FQ+VDD+LD E+GK G+
Sbjct: 253 TAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKR 312
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P ++ L A
Sbjct: 313 SCGGKTTYPKLM--------------------------------------GLDGAREFAD 334
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ AK+ L L+ + D+ R N
Sbjct: 335 KLNKDAKNQLSEFDREKA-APLLALADYIAYRQN 367
>gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 309
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 131/295 (44%), Positives = 188/295 (63%), Gaps = 2/295 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L A L ++G N +LA +
Sbjct: 1 MREVDIVIAQRLTTSVPLIAQISQYIIAAGGKRLRPALLLLIAGALGHQGKNKYILAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S L+
Sbjct: 61 ELIHTATLLHDDVVDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVEVGSMRVLQ 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++++++AG V
Sbjct: 121 ILSDATNVIAEGEVQQLINTHDASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEVE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QA +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I A QRG+ +
Sbjct: 181 QACAAYGQALGTAFQIIDDVLDYTGNTQEMGKNLGDDLREGKCTLPLIAAMQRGSAEQAA 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ I G S + L I+R AL A++ Q+A D+L LP +++
Sbjct: 241 IVRNAIEQG--STDQLDAVVEIVRSTGALDVARAAAHAEAQRAIDALASLPSNAY 293
>gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 589
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIE 72
+ + + + E + YL GGKR RP+LTL+ A + + LA +E
Sbjct: 285 LERALAELTDTRCETFAEASSYLQAQGGKRARPLLTLSAAEACGGADEAQRALGLAAGVE 344
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
++H +LL DD+VD + LRRG+ A + V F+ ++ + A
Sbjct: 345 WLHQGSLLLDDIVDAAELRRGRQALHAATSPTFAAGVATFVFARVVRASQGMHPE-IRSA 403
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L A TLAEGE +L + ++ DY +I +KTA LF+ A+EV + G +
Sbjct: 404 LVNSAATLAEGERLELQRTGEAELPRTDYYAIIAAKTASLFACAVEVGARAVGAPRGQVR 463
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL YG LG+AFQ++DDVLDY GE GK G D GK TLP I+ + E+
Sbjct: 464 ALIRYGRELGLAFQIIDDVLDYVGEARVFGKRPGTDLAAGKTTLPFIVLREALGGAERER 523
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ E+ + M +A + ++A +L LP S + +L
Sbjct: 524 LHRALGR----SEDFQWVLGQMAVREVAARCRAQADQHTERAVAALGRLPPSPARDALAG 579
Query: 313 VVDFCLQR 320
V R
Sbjct: 580 VARELGGR 587
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + I + ++Y + +GGKR+RP+L LA ++
Sbjct: 73 DFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLAACDLVGGSE 132
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK +V+G +VL GD LLS AF
Sbjct: 133 SMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLSFAFE 192
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + LA+ ++ + +V E + KTA
Sbjct: 193 HIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHVHKTA 252
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G + + L++Y ++G+ FQ+VDD+LD E+GK G+D
Sbjct: 253 KLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLV 312
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 313 ADKVTYPRLM--------------------------------------GIEKSREFAERL 334
Query: 291 GQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
+AKD L + K + L+ + ++ R N
Sbjct: 335 LNEAKDMLAGF--NQEKAAPLIALANYIAYRQN 365
>gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus]
Length = 337
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 31 PDVVKYL--IFSGG--------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
+ I +GG K +RP L L +A + + + A A+E +H +L+
Sbjct: 32 HQAAYHFGWITAGGAPVSADAGKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLV 91
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVA 137
HDD++D RR + +WG+ +++L GD LL+ A + A L+
Sbjct: 92 HDDLMDGDEERRHRRTVWKLWGSSSAILTGDALLALAQEVLLDTGLPTAAPAARLLARTT 151
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
L G+++ L+ + VT E+ + + KT L SA+ + +++AG + AL Y
Sbjct: 152 RHLIRGQVQDLAFEQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALY 211
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G+AFQLVDDVL G+ GK + D R+ K +LPV A +G
Sbjct: 212 GDQVGVAFQLVDDVLGIWGDPAVTGKPVHSDLRSRKKSLPVSHALNQGGPLSDELAAWLT 271
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
G+ E L++ ++ A A+D+LR + D+ + L+ + F
Sbjct: 272 TPGEPDEEELRRVAGLIEGAGGRDWALAEAARRMALAEDALRGVELDAGARDELLALGRF 331
Query: 317 CLQR 320
+ R
Sbjct: 332 VVDR 335
>gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 309
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 130/295 (44%), Positives = 188/295 (63%), Gaps = 2/295 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L A L ++G N +LA +
Sbjct: 1 MREVDIVIAQRLTTSVPLIAQISQYIIAAGGKRLRPALLLLIAGALGHQGKNKYILAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S L+
Sbjct: 61 ELIHTATLLHDDVVDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVEVGSMRVLQ 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++++++AG +
Sbjct: 121 ILSDATNVIAEGEVQQLINTHDASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEME 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QA +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I A QRG+ +
Sbjct: 181 QACATYGQALGTAFQIIDDVLDYTGNAQEMGKNLGDDLREGKCTLPLIAAMQRGSAEQAA 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ I G S + L I+R AL A++ Q+A D+L LP +++
Sbjct: 241 IVRNAIEQG--STDQLDAVVDIVRSTGALDIARAAAHAEAQRAIDALAALPGNAY 293
>gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Actinomyces viscosus C505]
gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Actinomyces viscosus C505]
Length = 369
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 10/310 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--- 59
LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + +
Sbjct: 11 ELESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALA 70
Query: 60 -RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A
Sbjct: 71 ATGEEIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARAS 130
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+V + + L G+L + + Y+ V+ KT L + +
Sbjct: 131 QLVAALGPEAVMAHAKTFER-LCMGQLHETLPRPAGTDPVDHYIQVLADKTGSLIAVSAR 189
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++ G Q ++ +G +G+AFQL DDV+D + GK G D R G T+PV
Sbjct: 190 YGAMLTGAGTRTEQIVEEFGERIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPV 249
Query: 239 ILAFQ-----RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
+L + + + L +RE+ L T A + +
Sbjct: 250 LLLRKALAAGELDAAGQAILSRLSSGDLSDDAFLSDVVARLREHPVLARTREMAMDWAAQ 309
Query: 294 AKDSLRCLPD 303
A + L L +
Sbjct: 310 AVEGLEGLEE 319
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K +V + + + E + + ++Y + +GGKRLRP+L LA +
Sbjct: 9 DFAEYLEKARTRVEDALDASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGEL 68
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E IHT +L+HDD+ LRRG+ V+G+ ++L GD LL++AF
Sbjct: 69 EKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFE 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L + L+ + + + + + KT
Sbjct: 129 MVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGA 188
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LI G + +AL Y +G+AFQ++DD+LD +GK G+D
Sbjct: 189 LLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIA 248
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 249 DKTTYPKLL--------------------------------------GLDESRRRADLLV 270
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK +L P+ S K L+ + D+ R
Sbjct: 271 AKAKSALDPWPEKS--KPLLALADYITSR 297
>gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Citrate
gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Citrate
Length = 334
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 5/317 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + +L+ + D + I + L+ SGGK LRP + +
Sbjct: 21 VEPQLTALQDYLLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATPAQLQA 80
Query: 68 -ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAFCMVIETK 125
A AIE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + ++ T
Sbjct: 81 GAAAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 140
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG
Sbjct: 141 DRSLIQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAG 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
SV + G+ +G A+Q++DD+LDY G+ K + ED R+G +
Sbjct: 201 APQSVIDRTRDIGIAIGCAYQMLDDILDYAGDPKRTQKPVLEDLRSGVY---SLPLLLSL 257
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++F K +++E++K ++ + + + A Y +A ++ LP S
Sbjct: 258 SHAPRDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGS 317
Query: 306 WKKSLMEVVDFCLQRLN 322
++SL ++ L+R +
Sbjct: 318 AQQSLEQLTRLLLRRDH 334
>gi|291302480|ref|YP_003513758.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290571700|gb|ADD44665.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 357
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/349 (20%), Positives = 130/349 (37%), Gaps = 37/349 (10%)
Query: 10 KDME-KVNFLILKRIC----------SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-ML 57
+D++ +V + K + S++ + + + I GGKR+RP
Sbjct: 8 QDLQVRVERALSKFLSRQRDRLTGIDSELAPVCEAAEIFILGGGKRIRPAFAYWGFRGAG 67
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL--------- 108
GD V A+E + + L+HDD++D S RRG+ + + + +
Sbjct: 68 GEDGDAVVACVSALELLQASALMHDDLMDGSDTRRGEPSVHRRFALRHTSSGWSGGADDF 127
Query: 109 --VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
LL + A + VA A+ + + +S +
Sbjct: 128 GACAAILLGDLCMTWSDEMFTGAGMPDAAVAAARADFDWMRTEVSAGQYLDVLTQAQRDT 187
Query: 167 SKTAVLFSAALEVSSLIAGVQ-----------NSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ L A + + +R A ++G+ LG AFQL DDVL
Sbjct: 188 TSARALKVARYKAAKYTIERPLLIGAALAGGSPELRSAYSAFGLPLGEAFQLRDDVLGVF 247
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ + GK G+D R GK T V A++ + + D ++ + + I+
Sbjct: 248 GDPTQTGKPAGDDLREGKHTFLVAGAYEAADAAQLRVLDERLGDRELDDAGVAELRDIIV 307
Query: 276 ENRALVDTEYRAYSYGQK---AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
AL TE R + ++ A + L + ++L E+ + ++R
Sbjct: 308 ATGALDRTERRIDTLAEQTATALREAKALIEPRACQALTELAEAAVRRQ 356
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + K I E I + ++Y + +GGKR+RP+L LAT M+
Sbjct: 17 NLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTI 76
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ +F
Sbjct: 77 EMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFQ 136
Query: 120 MVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKT 169
+V Q +L ++ L+ +++ E + KT
Sbjct: 137 LVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A++ +IAG Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 197 AALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITATKEQLGKTAGKDI 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P + + ++ +A
Sbjct: 257 ESAKVTYPSLW--------------------------------------GIEESRLKAQE 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L D + L E+ F + R +
Sbjct: 279 LVEEACAQLDFYGDKAV--PLQEIAHFIINRNH 309
>gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
Length = 319
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 10/305 (3%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+ +++ + + + + Y++ GGKR+RP+LTL +A + + + A ++E
Sbjct: 10 LERAFEEQVFGEHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWETAIEPAMSVEV 69
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEAL 130
H TL+HDD++D + LRRGK W ++L GD +L +A+ ++ + ++ ++A+
Sbjct: 70 FHNFTLMHDDIMDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYELLSKLEASLLKKAI 129
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ VA + EG+ + ++ +V++E+YL +I+ KT+VL ++E+ ++AG
Sbjct: 130 LRFNKVAAEVCEGQQLDMLFAEREEVSKEEYLEMIRLKTSVLVGYSMELGGIVAGASPDA 189
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L G NLG+ FQ+ DD+LD + GK +G D K T ++ A ++ +
Sbjct: 190 CELLYEVGENLGLGFQMTDDILDVYADPKLFGKQVGGDILENKKTWLLLRAMEKSGEDRV 249
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKK 308
S + + + + E + A +Y KA L+ L P K+
Sbjct: 250 RTLLSIEDP----DQKILAVRTLFDELNIKAEATSIAEAYFDKAMLGLQALVCPFEVEKE 305
Query: 309 SLMEV 313
+L +
Sbjct: 306 ALNTL 310
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/334 (25%), Positives = 148/334 (44%), Gaps = 57/334 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + L K++ ++ + + ++I + +KY +F+GGKRLRP+L L++ + E
Sbjct: 6 LKEKQQLIEKELHRILE-----VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVIKSK 168
++I + + ++ T +N +T E+ + + K
Sbjct: 121 EVLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + IAG AL+ Y +G+AFQ+ DD+LD GE ++GK +G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T I L ++
Sbjct: 241 REKGKVTFVNIF--------------------------------------GLKKSQQMVV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
QKA + L + + L E+ ++ ++R+N
Sbjct: 263 ELTQKAIEILDRFGEKAL--FLKELSNYLIERVN 294
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + K I E I + ++Y + +GGKR+RP+L LAT M+
Sbjct: 17 NLYAYLGERQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTI 76
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ +F
Sbjct: 77 GMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFE 136
Query: 120 MVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKT 169
V Q +L ++ L+ +++ E + KT
Sbjct: 137 FVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A++ +IAG Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 197 AALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTAGKDI 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P + + ++ +A
Sbjct: 257 ESAKVTYPSLW--------------------------------------GIEESRLKAQE 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L D + L E+ F + R +
Sbjct: 279 LVEEACAQLDFYGDKAV--PLQEIAHFIINRNH 309
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/334 (25%), Positives = 148/334 (44%), Gaps = 57/334 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K + L K++ ++ + + ++I + +KY +F+GGKRLRP+L L++ + E
Sbjct: 6 LKEKQQLIEKELHRILE-----VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVIKSK 168
++I + + ++ T +N +T E+ + + K
Sbjct: 121 EVLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + IAG AL+ Y +G+AFQ+ DD+LD GE ++GK +G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T I L ++
Sbjct: 241 REKGKVTFVNIF--------------------------------------GLKKSQQMVV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
QKA + L + + L E+ ++ ++R+N
Sbjct: 263 ELTQKAIEILDRFGEKAL--FLKELSNYLIERVN 294
>gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 368
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 9/309 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--- 59
LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + +
Sbjct: 11 ELESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALA 70
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A
Sbjct: 71 TGEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQ 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V S EA+ A + L G+L + + + Y+ V+ KT L + +
Sbjct: 131 LVA-ALSPEAVMAHAKTFERLCMGQLHETLPRPSGTDPVDHYIQVLADKTGSLIAVSARY 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ Q ++ +G +G+AFQL DDV+D + GK G D R G T+PV+
Sbjct: 190 GAMLTDAGVRTEQIVEEFGERIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPVL 249
Query: 240 LAFQ-----RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
L + + L +RE+ L T A ++ +A
Sbjct: 250 LLRKALAAGELDAAGQAILSRLSTGDLSDDAVLADVVARLREHPVLTRTREMATAWAAQA 309
Query: 295 KDSLRCLPD 303
+ L+ L +
Sbjct: 310 VEGLKGLEE 318
>gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
02_1987]
gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
02_1987]
Length = 325
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRMRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAVS 322
>gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987]
Length = 331
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 17 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 77 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 137 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 196 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 253 LREQTPDTSRMRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 310
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 311 PDRQPRRALATLIDHAVS 328
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 134/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ L+ VN + + + I + ++Y + +GGKR+RPML +A ++
Sbjct: 68 EFKEYVLEKAISVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVE 127
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK ++G +VL GD LL+ AF
Sbjct: 128 STAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFE 187
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + V LA+ ++ + DV + + KTA
Sbjct: 188 HIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEFIHLHKTA 247
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G + + L+ + +G+ FQ+VDD+LD ++GK G+D
Sbjct: 248 ALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLV 307
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 308 ADKVTYPKLI--------------------------------------GIEKSREFAEEL 329
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK L L + ++ R N
Sbjct: 330 NKEAKAQLVGFDQEKA-APLFALANYIAYREN 360
>gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
Length = 243
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 95/243 (39%), Positives = 142/243 (58%), Gaps = 1/243 (0%)
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
+LHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S
Sbjct: 1 MLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVN 60
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
+AEGE++QL + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG
Sbjct: 61 VIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYG 120
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Q G + + + I
Sbjct: 121 KYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYAMQHGNSEQASMIREAIE 180
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ L + + M + +L T +A KA L LP+S +K++L+ + +
Sbjct: 181 KAN-GMSRLNEILVAMEQTGSLQYTIEKAQREADKAIAELAILPESDYKQALITLAHMSV 239
Query: 319 QRL 321
R
Sbjct: 240 NRS 242
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 ISDFEKYLKNTKKVVEEALDVSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + ++IAG + QAL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ RA+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKRAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK ++ P S K L+ + DF R
Sbjct: 270 LVEKAKKAIE--PWGSDAKYLISLADFITNR 298
>gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
Length = 321
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 7/314 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66
D+E+V +++ I I + I + GK R L L A + + +
Sbjct: 12 IESDLERVKKMMIAEISVSNPEIKAKIMDYINASGKFARAGLVLMFARLNQKTISQEKLN 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+A IE H ATL+HDDV+D++ RRG A L N+ ++ GD+LL+ A + ++
Sbjct: 72 IAAGIELFHLATLIHDDVIDEADQRRGIQAFHLAESNRIAIYAGDYLLAYAMRFLYQSGL 131
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + GEL QL + +T YL IK KTA+LF A +
Sbjct: 132 NDFSGIEQKTIELILNGELNQLKNVADPTMTIYRYLRQIKGKTALLFGLATVGGYQTESI 191
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ G +G+AFQL+DD LD+ + + GK +D NG T P+I A +
Sbjct: 192 SRRQLKQAYYAGEEIGMAFQLIDDQLDFFQKQEQTGKPQLQDVMNGIYTAPLIRAIYQKP 251
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E+L++ ++ E+ A V E Y KA ++ L + +
Sbjct: 252 ILKNLILSI------ENEEDLQQIQDLIEESDADVYVENLVKKYLNKAIKRIQKLDQNDY 305
Query: 307 KKSLMEVVDFCLQR 320
++ ++ + R
Sbjct: 306 SSEILSLIQTLMTR 319
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 135/321 (42%), Gaps = 51/321 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+VN + + + + + ++Y + +GGKR+RP+L LA ++ + ACA+E
Sbjct: 89 RVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVE 148
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF + + + +
Sbjct: 149 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTAGVSP 208
Query: 131 EALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ LA+ ++ ++ DV E + KTA L A+ + +
Sbjct: 209 ARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLHKTAALLEGAVVLGA 268
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 269 ILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL- 327
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ A + A++ L
Sbjct: 328 -------------------------------------GIEKSKEFAEKLNRDAQEQLSGF 350
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ L+ + ++ R N
Sbjct: 351 DLNKS-APLIALANYIAYRQN 370
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 52/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M++ + M+ +N + + ++ + + + Y + +GGKRLRP+L +A A L
Sbjct: 1 MMKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G+ + L+ +IEFIHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ A
Sbjct: 61 DGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMA 120
Query: 118 FCMVIETKSQEALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ K+ +A + ++ G S+N + + + +KT
Sbjct: 121 FEIIATDKNVDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AA+ +++AG L Y G+AFQ+ DD+LD G+ +GK +G D +
Sbjct: 181 ALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGSDEK 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T + +L + A
Sbjct: 241 NHKSTYVTL--------------------------------------GSLGSAKALAQEA 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK SL +++ + L +VD+ + R
Sbjct: 263 VDKAKASLVDFGENA--EFLRALVDYLITR 290
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + V + I + E I + ++Y + +GGKRLRP+L L T ++
Sbjct: 18 DLVSYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTV 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRG++ V+G ++L GD LLS AF
Sbjct: 78 EMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDALLSYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V +L L V L ++ L ++T + + KT
Sbjct: 138 HVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFIHVHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + L Y N+G+AFQ++DD+LD E+GK G+D +
Sbjct: 198 ALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELGKTAGKDKQ 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L +++ +A
Sbjct: 258 AQKATYPSLW--------------------------------------GLEESQKQAQIL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L ++ L + F + R N
Sbjct: 280 IEDAIAQLAPYGREAY--PLEAIARFIVSRKN 309
>gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 362
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 130/314 (41%), Gaps = 20/314 (6%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV--LLACAIEFIHTATLLHDDVV 85
E ++ + L +GGKRLRP L A L GD+ + L AIE +HT L+HDD++
Sbjct: 50 EPFDELSR-LTRAGGKRLRPALAFWAARGLGVDGDDELLGDLLVAIELLHTFALVHDDIM 108
Query: 86 DDSALRRGKVAARLVWGNQT----------------SVLVGDFLLSQAFCMVIETKSQEA 129
D S LRRG V ++ +LVGD L+ A +
Sbjct: 109 DRSELRRGAVTVHARARDEHRSLKLRGEAETYGDAIGILVGDLALTLADGALEAAPLPVR 168
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L L ++ ++ D E + L + +L+A +
Sbjct: 169 ATFTQLKLEVNLGQYLDVVASAQLFDTPEHAEHIALFKSAKYTVERPLHLGALLADPADG 228
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
V AL + + LG+AFQL DDVL G+ K +G+D R GK TL V +R +
Sbjct: 229 VLAALSRFALPLGLAFQLRDDVLGVFGDGARTRKPVGDDLREGKWTLLVAETRERLDVAD 288
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKK 308
+ + D + L ++R + AL E R +A D+L LP S +
Sbjct: 289 LVRFDEALGDANLEGRALDDVLGLVRRSGALDRVEQRIDELADQAMDALGDLPLSAEARC 348
Query: 309 SLMEVVDFCLQRLN 322
+L ++ F + R +
Sbjct: 349 ALGDLATFIVARQH 362
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + K I I + ++Y + +GGKR+RP+L +A ++ + + ACAIE
Sbjct: 100 VNEALNKAIPLRYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGTEELAIPTACAIEM 159
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK ++G T+V G+ L S AF + + S+
Sbjct: 160 IHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAFEHIAVSTSKTVGA 219
Query: 132 ALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L + G++ ++ + + + + KTA+L ++ +
Sbjct: 220 DRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHKTAMLLECSVVCGA 279
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G V + + Y +G+ FQ+VDD+LD +E+GK G+D + K T P ++
Sbjct: 280 IIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKDLISDKATYPKLM- 338
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + + +AK L C
Sbjct: 339 -------------------------------------GLEKAKEFSDELLNRAKGELSCF 361
Query: 302 PDSSWKKS-LMEVVDFCLQRLN 322
K + L+ + D+ R N
Sbjct: 362 D--PVKAAPLLGLADYVAFRQN 381
>gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 325
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 152/314 (48%), Gaps = 7/314 (2%)
Query: 15 VNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
V + + + + D ++Y++ GK++RP+LTL A + + V A AIE
Sbjct: 11 VQEALTSAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE- 131
+ H +L+HDD++D + LRRG++ W + ++L GD LL +A+ V + + L+
Sbjct: 71 YFHNFSLIHDDIMDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLDL 130
Query: 132 --ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ VA + EG+ + VTE++YLH+I+ KT+VL AL + ++IA
Sbjct: 131 LTTFNKVATEVCEGQQLDMDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQASLE 190
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ + +G+N+GIAFQL DD+LD G+ GK +G D K T +I + + +
Sbjct: 191 QQEFIYDFGVNVGIAFQLQDDILDVYGDPETFGKQVGGDIIANKKTFLLIKLLEHASDTD 250
Query: 250 -KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWK 307
+ D + + ++ + + + A D+L + S K
Sbjct: 251 LAHIQNLLTADLEQEPDKVQLMKQFYAKYDISTLANRKKEYFTTLAFDTLAKINVPSERK 310
Query: 308 KSLMEVVDFCLQRL 321
L+++ + L R+
Sbjct: 311 AELIKLAENLLNRI 324
>gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
Length = 327
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 8/325 (2%)
Query: 4 LEDLTLKDM-EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+E T K++ ++++ I S + D ++Y++ GGKRLRP+L L + +
Sbjct: 1 MEQQTSKELLKQIHAYIESLPYSHEPKGLYDPIEYVLGLGGKRLRPVLMLLAYNLFKEDV 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A AIE H TLLHDD++D + +RRGK W T++L GD +L +F +
Sbjct: 61 QAIFSQAAAIETYHNFTLLHDDLMDKADMRRGKPTVHKKWDENTAILSGDAMLILSFQFM 120
Query: 122 IETKSQEALEALSLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ E + + +G+ + DVT ++Y+ +I+ KT+VL + AL
Sbjct: 121 MQGCPVEYTHQVMDIFSRTALEVCDGQQWDMEFESREDVTVDEYMEMIRLKTSVLLAGAL 180
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ +++ G Q L +G+ +G+AFQL DD LD G+ GKNIG D K T
Sbjct: 181 KIGAVLGGASEKDAQLLYDFGIQIGLAFQLQDDYLDVYGDPLVFGKNIGGDILCNKKTFM 240
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKD 296
+I A ++ + + + + +A + L + + Y +
Sbjct: 241 LITALEKSDDKTRASLQEWLKAEDYVPAQKIEAVTAIYNKVGLQNICRDKINEYYHEGMR 300
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQR 320
L+ + + +KK L + V ++R
Sbjct: 301 LLKEVNVEEEYKKKLSDFVMSLMER 325
>gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
Length = 306
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 11/291 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME ++ +++ + VE+ + +Y+I SGGKR+RP +TLA A L + + LA AI
Sbjct: 1 MESLDERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVAKGLGLEEKDALDLASAI 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+L+HDDV+D + RR + WG + +VL GDFL +A ++ K E ++
Sbjct: 61 ELIHTASLVHDDVIDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIA-GKKVEMVD 119
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ V + + E+ Q ++ ++ + E Y +I KT LF A+ + + G
Sbjct: 120 YVAKVVEDMVKAEILQEAVRGSVHLDLETYYRIIDGKTGRLFGASFALPAYYHGKTYWEE 179
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
G +G AFQ+VDDVLDY GK+ +D NGK TLP+IL +R
Sbjct: 180 LDRA--GTLVGRAFQIVDDVLDYFPGT---GKDRFKDLLNGKTTLPLILYTERYGSSLVE 234
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++L + F M + ++ RA Y ++A + LP
Sbjct: 235 RIL-----KNPKEDDLLELFERMSKAGVFEESLARARGYVEEALGLVDGLP 280
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 136/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K+ +V + + + + + ++Y + +GGKRLRP+L LA ++
Sbjct: 10 DFAAYLAKEKIRVEAALDASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAGES 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A AIE IHT +L+HDD+ LRRG+ V+G+ ++L GD LL++AF
Sbjct: 70 ETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRAFE 129
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV + E L V G + DV + ++ KT
Sbjct: 130 MVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIHIHKTGA 189
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++ +LI G ++ + AL++Y +G+AFQ++DD+LD +GK G+D
Sbjct: 190 LLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGKDLIA 249
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L + ++ RA
Sbjct: 250 DKTTYPKLL--------------------------------------GVDESRQRAKVLI 271
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK L P L+ + D+ + R
Sbjct: 272 EKAKSVLE--PWEDDATPLLALADYIISR 298
>gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 326
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 91/327 (27%), Positives = 156/327 (47%), Gaps = 13/327 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
LE+ + V+ + + DV + + LI SGGKR+RP++ + +
Sbjct: 2 KLEETLNIPLRTVDRELENMVKYDRDVPRSSQLAKAIVELIRSGGKRIRPLMVIVGSRFG 61
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA A EFIH A+L+HDD++DDS +RRG+ A + G ++ VG+++ ++
Sbjct: 62 PDPDEKKVWRLAAAAEFIHAASLIHDDIIDDSPMRRGQKAMHIKLGVSGALHVGNYMSAR 121
Query: 117 AFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
++ ++ L L GE +QLS + DVT ++YL K+KTA L
Sbjct: 122 VIELISVYSAEREKFVYDLSSLATTKLCLGEYQQLSHLFDYDVTIDEYLEKSKNKTAQLM 181
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ L++ + AG + L S+G LG++FQ+ DDVLDY ++GK G D R+G+
Sbjct: 182 ATCLQIGAKAAGADTETAELLYSFGEKLGMSFQIRDDVLDYTQSAEKLGKPAGSDLRSGQ 241
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TLPV+ + E E + ++ + AL TE + Y +
Sbjct: 242 VTLPVLF----ALQDETLAPAIRAISADSPAEEVDAVVAAIQASGALEKTEALSRQYLDE 297
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A+D + L + L ++++ +R
Sbjct: 298 AQDIINRLSHYPAHRDLQALLEYFGRR 324
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + + I + ++Y + +GGKR+RPML +A ++
Sbjct: 80 DFKTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGLE 139
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK ++G +VL GD LL+ +F
Sbjct: 140 STAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFE 199
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V ++ + + + V LA+ ++ +S +V E + KTA
Sbjct: 200 HVAKSTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTA 259
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A++ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 260 ALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLV 319
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L + + A
Sbjct: 320 ADKTTYPKLL--------------------------------------GIEKSREFAEKL 341
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ L DS L+ + ++ R N
Sbjct: 342 NREAQEQLEGF-DSVKAAPLIALANYIAYRDN 372
>gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
Length = 297
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + + V+ + + + ++ + ++Y IF+GGKR+RP+L LA +
Sbjct: 2 DLKSYLKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGGKRIRPILMLAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IHT +L+HDD+ RRG V+G ++L GD LL++A
Sbjct: 62 NISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEA 121
Query: 118 F-----------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F + + + G++ + N ++ ++
Sbjct: 122 FILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQYIHT 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A+++ +L+ G + ++L YG +G+AFQ+ DD+LD G E+GK+ G
Sbjct: 182 HKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P ++ L + + R
Sbjct: 242 SDEARGKATYPAVM--------------------------------------GLAEAKIR 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A D+L D L E+ + ++R +
Sbjct: 264 AAELVDIALDALSAF-DGKA-DPLREIASYIVKRKS 297
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 299
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/335 (19%), Positives = 122/335 (36%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+E ++ + + I ++ + + ++Y GGKR+RP+L L
Sbjct: 5 NMEQHISALRARLEQALDRWIPAETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGV 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IH +L+HDD+ +D+ LRRGK + ++L GD + + A
Sbjct: 65 APERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALA 124
Query: 118 FCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ A L +A G+ L + +
Sbjct: 125 FQILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHK 184
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ ++ L + V + + L + +G+AFQ+ DD+LD G+ +GK G
Sbjct: 185 TGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLGKTQGA 244
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT P ++ L ++ A
Sbjct: 245 DQALNKPTYP----------------------------------ALI----GLEESRQAA 266
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L + L + + ++R++
Sbjct: 267 RELVDQALGALEGF--GAEADLLRWIARYIVERIH 299
>gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CDC1551A]
Length = 325
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E L V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHCLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAVS 322
>gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
Length = 333
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 19 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 79 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E L V+ KT L +A+ ++ +
Sbjct: 139 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHCLRVVHEKTGSLIAASGQLGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 198 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 255 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 312
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 313 PDRQPRRALATLIDHAVS 330
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 131/333 (39%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + I I + ++Y + +GGKRLRP+L LAT+ M+
Sbjct: 17 NLVAYLKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTI 76
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRG + V+G+ ++L GD LL+ AF
Sbjct: 77 EIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAFE 136
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
V + L L G++ L D++ E + KT
Sbjct: 137 FVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A + ++AG + Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 197 AALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDL 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + + + +A
Sbjct: 257 LAKKVTYPSLW--------------------------------------GIEQSRVKAQQ 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L + L + F R +
Sbjct: 279 LIEAACAELEPF--GEDAQPLKAIAHFITSRNH 309
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 134/320 (41%), Gaps = 51/320 (15%)
Query: 15 VNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + D MI + ++Y + +GGKR+RPML A ++ N + ACA+E
Sbjct: 83 VNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAACAVEM 142
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+H +DD LRRGK V+G +VL GD LL+ AF +
Sbjct: 143 IHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATIGVPPS 202
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + LA+ ++ L+ + N +V E + KTA L A++ + ++
Sbjct: 203 RILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAI 262
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + L+ + +G+ FQ+VDD+LD +E+GK G+D K T P +L
Sbjct: 263 LGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPKLL-- 320
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + A +AK L
Sbjct: 321 ------------------------------------GLEKAKEFAAELNGEAKQQLAAF- 343
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
DS L+ + D+ R N
Sbjct: 344 DSHKAAPLIALADYIANRQN 363
>gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
Length = 294
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 52/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + I S + + +Y + GGKR+RP+LTLATA +
Sbjct: 1 MNTVNHDLTSYITLIENKLEALIPSCSGADACLYEAARYALLGGGKRIRPILTLATAKLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLS 115
+ ++ ACAIE IHT +++HDD+ RRGK + + +VL GDFLL+
Sbjct: 61 NADIEAALVPACAIEMIHTYSVIHDDLPCMDDDDFRRGKPSLHKQFNEALAVLTGDFLLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSK 168
+AF ++ E + + L+ + + + +D+ + H+ K
Sbjct: 121 RAFEVISEDRQLNVEMQIDLIRTIACASGGKGMIGGQVIDISSEGKGLDLKQLQHLHAKK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L +AA+E ++A + RQ + ++G+AFQ+VDD+LD V + G I D
Sbjct: 181 TGALITAAVECGCIVASASDEERQPALQFAQDIGLAFQIVDDLLDITSGVKKRGAEISSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T ++ + + A
Sbjct: 241 RENNKSTY----------------------------------VALL----GIEEARKSAD 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A SL L S + L E+ F ++R +
Sbjct: 263 QLFNNAIKSLDQL--SQETEFLKELAHFIIKRDH 294
>gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
Length = 324
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EK+N I + + D V Y++ GGKR+RP+L L + + A
Sbjct: 8 LEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + +
Sbjct: 68 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPVDCLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV EE+YL +I+ KT VL +A+L++ +L+ G
Sbjct: 128 EVMELFSLTALEICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +GMNLG+AFQL DD+LD G+V GKNIG D K T +I AF+
Sbjct: 188 AEDAGHLYDFGMNLGVAFQLKDDLLDVYGDVAVFGKNIGGDILCNKKTYMLIKAFEHADD 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + I+ E + + + E + Y ++A +L +
Sbjct: 248 IQLQELNAWIDAKSFEPAEKIAAVTGLYDQIGIKEICERKMAEYSERAMVNLSAVKVPDE 307
Query: 307 KKS-LMEVVDFCLQR 320
KK+ L ++ + R
Sbjct: 308 KKAELENLMKNLMHR 322
>gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
Length = 326
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 1/300 (0%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ S + + ++ YLI GK +RP+ ML LA +E +HTA+L+H
Sbjct: 27 YLRSKIPIFKEINNYLIKIKGKYIRPIFIFLITKMLGNICKKTYDLAYLVELMHTASLIH 86
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
DDV+D S RRG ++ +W N+T+V+ GD++ S++ + I+ ++ L +S ++
Sbjct: 87 DDVIDFSTTRRGVLSINAIWQNKTAVIFGDYIFSKSLNIAIKNNYKDYLNIISKTIEKMS 146
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
EGE+ Q+ +++ + Y +I KTA++ A E + + + +K +G
Sbjct: 147 EGEIFQIEYFHKMNINKYIYEKIIFKKTAIMIGACCEGGARSINKKKKIILEIKKFGELA 206
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LDY + N + K TLP I ++ +K+ K + + K
Sbjct: 207 GMAFQIKDDLLDYENV-QNLNINYYLILKEIKITLPFIYTLKKSSKKNKQWLFNLFKKKK 265
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
I+ K I +++ + + Y+ K L + +SL V+ F +R
Sbjct: 266 INFFFYNKILIFIQKFGGIEYSIYKMKLLTNKTLFILNKYYKNKANESLKNVIIFNKKRK 325
>gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
Length = 372
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 51/321 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+VN + + + + + ++Y + +GGKR+RP+L LA ++ + ACA+E
Sbjct: 91 RVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVE 150
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF + + +
Sbjct: 151 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSP 210
Query: 131 EALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ LA+ ++ ++ DV E + KTA L A+ + +
Sbjct: 211 ARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGA 270
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 271 ILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL- 329
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ A + A++ L
Sbjct: 330 -------------------------------------GIEKSKEFAEKLNRDAQEQLSGF 352
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ L+ + ++ R N
Sbjct: 353 DLNKS-APLIALANYIAYRQN 372
>gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 321
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 5/300 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + + + YL+ GKR+RP+ TL + + + +A A E H TL+HDD++D
Sbjct: 23 PKELYEPMIYLLSMKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDDIID 82
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEG 143
++ LRRG+ W ++L GD +L A+ + ++ Q S +A + EG
Sbjct: 83 NAFLRRGQSTVHTKWNKTIALLAGDSMLILAYKYIAKSPLQYRDILLHLFSSIAAKVCEG 142
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + L LDV +++YL +++ KTA L SA L +++ G + L+ +G+NLGI
Sbjct: 143 QAYDMLLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAKFLQDFGINLGI 202
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DD+LD G + GK IG D + + T +I A + E+ +N+ +
Sbjct: 203 AFQIQDDMLDVYGNSS-FGKEIGSDIFSNRRTYLLINALNICDEMERKELLFWLNEKEQK 261
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
E + + + T SY ++A SL+ + KK L+E+ + R +
Sbjct: 262 EEKITAIISLYDKMEIKKKTCRTIESYYRRALFSLKKVNVEEEKKVDLVELTKELMNRTS 321
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 52/320 (16%)
Query: 15 VNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
VN + + + ++ + Y + +GGKRLRP+L L + + ACAI
Sbjct: 19 VNRQLEEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALPAACAI 78
Query: 72 EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+HDD+ LRRG + + +G ++L GD LL++AF ++ ++
Sbjct: 79 EMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRAFELLANQIEVKS 138
Query: 130 LEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
A V + G++ L + T E + K KT L +AL + +
Sbjct: 139 CAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKRKTGRLICSALTMGAR 198
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I G + + L+ YG +G+AFQ+ DD+LD G+ +MGK + +D +GK T P ++
Sbjct: 199 IGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEKMGKGVRKDADHGKLTYPSLI-- 256
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ ++ R+ + ++A L P
Sbjct: 257 ------------------------------------GVEESRRRSQNLIEEA--CLSIAP 278
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S + L E+ F L+R +
Sbjct: 279 LGSHGQRLEELAHFILERDH 298
>gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
Length = 327
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ D ++Y++ GGKRLRP+L L + + A IE H TLLHDD++D +
Sbjct: 29 LYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQAAGIETYHNFTLLHDDLMDKAD 88
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL----AEGEL 145
+RR K W T++L GD +L A+ +++ E +E + V EG+
Sbjct: 89 MRRNKPTVHKKWDENTAILSGDAMLILAYQFMMKECPLECVERVMEVFGRTALEVCEGQQ 148
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ LDVT ++Y+ +I+ KT+VL +AAL++ +++ G Q L +G+ +G+AF
Sbjct: 149 WDMEFEHRLDVTVDEYIEMIRLKTSVLLAAALKIGAILGGAPEKDAQLLYDFGIKMGLAF 208
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT-KREKNFWKSTINDGKISV 264
QL DD LD G+ GK IG D K T +I A + ++ ++
Sbjct: 209 QLQDDYLDVYGDPAVFGKKIGGDILCNKKTFMLITALSLSEGEDKETLLNWLRATDYVAE 268
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
E ++ + + + R +Y ++ + L + +SS K+ L + V + R
Sbjct: 269 EKIQSVTALYNKVGVPELCQARIDTYYKEGLELLDKVNVESSLKEELKKFVCHLMDRK 326
>gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu001]
gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu010]
gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu011]
gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu012]
gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu001]
gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu010]
gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu011]
gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu012]
Length = 333
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 19 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 79 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 139 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 198 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 255 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 312
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 313 PDRQPRRALATLIDHAIS 330
>gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra]
Length = 331
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 17 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 77 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 137 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 196 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 253 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 310
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 311 PDRQPRRALATLIDHAIS 328
>gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
H37Ra]
gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
H37Rv]
gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
H37Ra]
Length = 325
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAIS 322
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 85/334 (25%), Positives = 142/334 (42%), Gaps = 59/334 (17%)
Query: 8 TLKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+++++N I + +I ++Y +F+GGKRLRP+L LA +
Sbjct: 3 LKAELKQLNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGCRAVGGD 62
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + ACA+E IHT +L+H +DD LRRG +V+G T++L GD LL++AF
Sbjct: 63 EESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLTRAF 122
Query: 119 CMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ E + ++ G S+N + ++ K
Sbjct: 123 GVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMAYIHAHK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A+L + +L+ G +AL YG +LG+AFQ+ DD+LD +G+ ++GK +G D
Sbjct: 183 TGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPVGSD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T P ++ L A
Sbjct: 243 VKNNKATYP----------------------------------ALL----GLEKARQEAE 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A DSL + + + L E+ + L R N
Sbjct: 265 RVVQAALDSLAGFDEKA--ELLRELAQYLLVREN 296
>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
Length = 297
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 69/322 (21%), Positives = 120/322 (37%), Gaps = 53/322 (16%)
Query: 14 KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ ++ +R+ +D + + ++Y SGGKRLRP+L A D +A A
Sbjct: 16 RIETVLDQRLAADSAPDPRLIEAMRYATLSGGKRLRPVLVYAAGATCGAPDDVLDAMAAA 75
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------ 122
+E +H +L+HDD+ +D+ LRRG+ + T++L GD L + AF ++
Sbjct: 76 VEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDALQACAFEIMTAGVRAL 135
Query: 123 --ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E G + + + + + KT L ++ +
Sbjct: 136 PGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMHRLKTGALIRVSVRLG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ GV L Y +G+AFQ+ DDVLD G+ +GK G D R K T P
Sbjct: 196 AIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGDPEVLGKACGADARLDKATFP--- 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ L + RA + +A L+
Sbjct: 253 -----------------------------------SLQGLEASRERAVALVDEALAELQP 277
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + + + R+N
Sbjct: 278 F--GQEADLLRFLARYIVDRMN 297
>gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 79/335 (23%), Positives = 130/335 (38%), Gaps = 54/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ + VN + + + I + ++Y + +GGKR+RP+L +A ++
Sbjct: 71 DFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEE 130
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ CA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LLS AF
Sbjct: 131 SLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFE 190
Query: 120 MVIETKSQEALEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ S E A + A + +V E +
Sbjct: 191 HLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLH 250
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L A+ + +I G + + L+ + +G+ FQ+VDD+LD E+GK G+
Sbjct: 251 KTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 310
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ L + A
Sbjct: 311 DLIADKLTYPKLM--------------------------------------GLEKSREFA 332
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+D L DS L+ + ++ R N
Sbjct: 333 EKLNTEARDQLLGF-DSDKVAPLLALANYIANRQN 366
>gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92]
Length = 331
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 17 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 77 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 137 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 196 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 253 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 310
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 311 PDRQPRRALATLIDHAVS 328
>gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
C]
gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
C]
Length = 333
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 19 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 79 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 139 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 198 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 255 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 312
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 313 PDRQPRRALATLIDHAVS 330
>gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
F11]
gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 1435]
gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
str. Haarlem]
gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 605]
gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T92]
gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 4207]
gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN R506]
gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN V2475]
gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
AF2122/97]
gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
str. Haarlem]
gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
F11]
gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 1435]
gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 605]
gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T92]
gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
W-148]
gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 4207]
Length = 325
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAVS 322
>gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
210]
Length = 325
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIGASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAVS 322
>gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon
RC-I]
gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon
RC-I]
Length = 314
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 22/319 (6%)
Query: 11 DMEKVNF----LILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
D+EKV LI K + + + +VV+Y + GK++R L +
Sbjct: 7 DIEKVLESRATLIDKEMGLLSFVIEPPELAEVVRYALCQKGKKIRASLLTIACEAVGGNI 66
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ A +E IH +L+ DDV+D++ RRG+ WGN +++ D LL+
Sbjct: 67 AQAMVPAAVVEMIHNTSLVLDDVIDNAETRRGRSTINHRWGNNMALIACDALLALTIRQA 126
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + A ++ + D T +DY + + KTA LFSA+ E+ +
Sbjct: 127 SKSSVNMTNAIIECAANSMLSLAEGEALELVGKDYTLKDYYKIAERKTASLFSASAEIGA 186
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ G + ++L+ YG ++GIAFQ+ DD+LD + +GK D + +PT+ ++LA
Sbjct: 187 LVGGGTSKEVKSLREYGTSIGIAFQIRDDILDVTSSNDSLGKPTLIDLKMDRPTVIMLLA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ G REK S E+L++ ++ E A KA+ L +
Sbjct: 247 HEEGLTREKMLAM--------SREDLQEVLK-----PSVARAEMLAREQIDKARRQLESV 293
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+ L + D+ L R
Sbjct: 294 RAGPSRDLLFALSDYVLAR 312
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 132/329 (40%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K +V + + + E + + ++Y + +GGKRLRP+L LA +
Sbjct: 9 DFAEYLEKARTRVEDALGASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGEL 68
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E IHT +L+HDD+ LRRG+ V+G+ ++L GD LL++AF
Sbjct: 69 EKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFE 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L + L+ + + + + + KT
Sbjct: 129 MVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGA 188
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LI G + AL Y +G+AFQ++DD+LD +GK G+D
Sbjct: 189 LLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIA 248
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 249 DKTTYPKLL--------------------------------------GLDESRRRADLLV 270
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK +L P+ S K L+ + D+ R
Sbjct: 271 AKAKSALDPWPEKS--KPLLALADYITSR 297
>gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973]
gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973]
Length = 324
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + +KY++ GGKR+RP L L + + ++ + ACAIE H TLLHDD++D +
Sbjct: 27 LYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILSTACAIETYHNYTLLHDDLMDHAD 86
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELR 146
+RRG+ WG T++L GD +L A+ + ++ + + L L T + EG+
Sbjct: 87 VRRGRATVHKRWGANTAILSGDSMLVLAYERLARCRADKLKDILDLFTETALEIGEGQEF 146
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+S + DV EE+Y+ +I+ KT+VL + A+++ +++A + + L +G +G+AFQ
Sbjct: 147 DMSFEQRDDVKEEEYIEMIRLKTSVLLACAMKMGAILADAPPADAENLYKFGEQIGLAFQ 206
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VE 265
L DD LD G+ GK IG D + K T +I AF + K+++ + I E
Sbjct: 207 LQDDFLDVYGDPKLFGKAIGGDIVSNKKTYMLINAFAKADKKQREELMTWIGKTDFDNNE 266
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRL 321
++ + E + Y +++ L + +K+ L D ++R
Sbjct: 267 KVETVTRLYNEIGIDKLAIEKIDYYFGESRKYLSAVEVPVSRKAELTRYADNMMRRK 323
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 130/333 (39%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
L+ VN + + + I + ++Y + +GGKR+RP+L +A + M+
Sbjct: 73 DLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGT 132
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A A+E IHT +L+HDD +D+ LRRGK +G T+VL GD +LS AF
Sbjct: 133 QEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAF 192
Query: 119 CMVIETKSQEALEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + E + + L G++ ++ V + ++ KT
Sbjct: 193 EHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRYIHIHKT 252
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L AA ++ G ++SY +G+ FQ+VDD+LD E+GK G+D
Sbjct: 253 GKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDL 312
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L A
Sbjct: 313 ISDKTTYPKLL--------------------------------------GLQGARDYAEE 334
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK L +S L+ + D+ R N
Sbjct: 335 LLAGAKQQLAAFGESRA-APLLALADYIAYRQN 366
>gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis
NIES-39]
Length = 537
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 79/344 (22%), Positives = 126/344 (36%), Gaps = 36/344 (10%)
Query: 13 EKVNFLI--LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
K+ I + I E + D++ F GGK LRP + ++ A + G + A A
Sbjct: 192 AKIQEFIGRRREIIGSYEPLYDLLLDYPFRGGKMLRPTMCISAARAMGGMGQVALSTAAA 251
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---------CMV 121
+E H A L+HDD+ D S RRGK G ++ VGD A V
Sbjct: 252 LELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNVLAVGLLLENLSAIGV 311
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE--- 178
+T + + ++++ DY + KT
Sbjct: 312 TKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIG 371
Query: 179 ----VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
SS + +GM LGIAFQ+ DD+L+ G++ GK IG D GK
Sbjct: 372 LIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMKAYGKEIGGDIYEGKR 431
Query: 235 TLPVILAFQRGTKREKNFWKST--INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TL + A + E + + E ++ MR+ ++ A S Q
Sbjct: 432 TLMLNHAIAHSSPVESRRMLEILATPRPEKTPEQVEFVMEKMRQYGSIEHGWAVARSLAQ 491
Query: 293 KAKDSLRCL----PDSS------------WKKSLMEVVDFCLQR 320
KA L L P + ++ L E++++ + R
Sbjct: 492 KAAQILDSLDFMEPKTPLRPGEKWQTPVHDRRFLKELINYVIYR 535
>gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 537
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 79/344 (22%), Positives = 126/344 (36%), Gaps = 36/344 (10%)
Query: 13 EKVNFLI--LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
K+ I + I E + D++ F GGK LRP + ++ A + G + A A
Sbjct: 192 AKIQEFIGRRREIIGSYEPLYDLLLDYPFRGGKMLRPTMCISAARAMGGMGQVALSTAAA 251
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---------CMV 121
+E H A L+HDD+ D S RRGK G ++ VGD A V
Sbjct: 252 LELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNVLAVGLLLENLSAIGV 311
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE--- 178
+T + + ++++ DY + KT
Sbjct: 312 TKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIG 371
Query: 179 ----VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
SS + +GM LGIAFQ+ DD+L+ G++ GK IG D GK
Sbjct: 372 LIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMKAYGKEIGGDIYEGKR 431
Query: 235 TLPVILAFQRGTKREKNFWKST--INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TL + A + E + + E ++ MR+ ++ A S Q
Sbjct: 432 TLMLNHAIAHSSPVESRRMLEILATPRPEKTPEQVEFVMEKMRQYGSIEHGWAVARSLAQ 491
Query: 293 KAKDSLRCL----PDSS------------WKKSLMEVVDFCLQR 320
KA L L P + ++ L E++++ + R
Sbjct: 492 KAAQILDSLDFMEPKTPLRPGEKWQTPVHDRRFLKELINYVIYR 535
>gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
Length = 337
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 7/315 (2%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E + + + + + + Y + GKRLRPML + T + + + A A
Sbjct: 22 LEAIEHYLGQIGYPEEPGRLYAPISYSLTMSGKRLRPMLLMLTCGIFSDQPQAAMPAAAA 81
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++A+RRG + WG ++L GD +L A+ ++ E Q
Sbjct: 82 VEVFHNFTLLHDDIMDNAAMRRGNPSVFAKWGQNVAILSGDAMLISAYRLLSEYPPQVLP 141
Query: 131 E---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + +A + EG+ + V+ E+YLH+I+ KT+ L S A + ++I G
Sbjct: 142 QILARFNTMAIEVCEGQQYDMDFETRESVSVEEYLHMIELKTSALLSGATVIGAIIGGAG 201
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
Q L + LG+AFQL DD+LD G+ +GK IG D GK T +++A + +
Sbjct: 202 EEDCQRLYRFATELGLAFQLQDDLLDSYGDER-LGKAIGGDILEGKKTYLMVMALSKASA 260
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
E ST +D +S + + + + + TE + ++A + L L S
Sbjct: 261 AEHRILASTYSDPTLSDQQKIARVREVFDKLGVARLTEQQINHRFERALNILDTLSVQSE 320
Query: 306 WKKSLMEVVDFCLQR 320
L E + R
Sbjct: 321 GTARLREYAGSLIGR 335
>gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
Length = 293
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 46/315 (14%)
Query: 15 VNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+N + + + S + + +K++I +GGKR RP++ L +A + + + +A A+E
Sbjct: 11 INNELERLVNSVNTIPKVKKALKHVISAGGKRTRPLIVLLSAKLCGGDYKDVMDMALAVE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L+HDD++D +RR A + + ++LVGD+L+S++ +V + SQ E
Sbjct: 71 LIHTASLVHDDIIDRGVMRRNVKALHVEYDISLAILVGDWLISKSVELVSKYPSQIIKEF 130
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L S + TE+ Y I KTA LF+ + S+++ +
Sbjct: 131 AKTGMMMSEGEVLDVYSPYERF--TEDTYFKCITFKTASLFAYGAKNSAMVVCDDEKAWE 188
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ YG+NLGIA+QLVDD+L+ M + + TLP+I
Sbjct: 189 KMFEYGLNLGIAYQLVDDLLE------YMNSYVEKSSEVESITLPMIY------------ 230
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+G+ + ++R Y +++ +L D K+ L
Sbjct: 231 ------EGRYGERTVDVILELIR-------------DYANRSRSALEYFEDCEAKEKLSY 271
Query: 313 VVDFCL-----QRLN 322
++D+ RL+
Sbjct: 272 LIDYMTFDLIRNRLS 286
>gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 557
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 8/316 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + + + + D+ +Y + + GK LRP+L + A + + V A A+E
Sbjct: 240 ARLREALRAQWPETGDPVLDISRYALLTPGKMLRPLLLASAAGAVGGDVERVVPAALAVE 299
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
++H +L+HDDV+DD +RRG+ + + +G +++VGD L+ + F V
Sbjct: 300 YLHVGSLVHDDVIDDDEVRRGQPSVQHRFGVPEAIVVGDALIFKTFSAVAACVELGVTAE 359
Query: 133 LSLVACTLAEGELRQLSLSK--------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+L A + + + DY+ V+ KT LF A +L+
Sbjct: 360 AALGAARAIADAGVDVCRGQALEGALAADPTHPLGDYVTVMALKTGALFRGACRAGALLG 419
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G +A+ SY +LG+AFQ+ DD+L Y + GK+ D RN +PT PV+LA +R
Sbjct: 420 GGGPEAVEAVTSYAEHLGLAFQVHDDLLPYLSDSAVTGKSELSDLRNLRPTYPVLLAHER 479
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
GT ++ ++ + E ++ + AL A + AK L LP +
Sbjct: 480 GTAGQRARIARVLSGELPAEEAYPALRELLVDTGALAVATEHAEAEVALAKSCLSGLPGN 539
Query: 305 SWKKSLMEVVDFCLQR 320
+L V D + R
Sbjct: 540 EHTATLAGVADKSVAR 555
>gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
Length = 325
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L G + + A +
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGGYRFATASQLA 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 131 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP++ A
Sbjct: 190 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMLYA 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 247 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 304
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 305 PDRQPRRALATLIDHAVS 322
>gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 325
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 8/317 (2%)
Query: 12 MEKVNFLILK--RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++KVN + + + + + ++Y++ GGKR+RP+L L + + + D+ + A
Sbjct: 9 LDKVNTYLATMPYMR-EPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQAA 67
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++
Sbjct: 68 GIETYHNYTLLHDDLMDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPDSYL 127
Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + + + T + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++
Sbjct: 128 KQVMDIFSQTALEICEGQQWDMEFETRSDVTVSEYIEMIRLKTSVLLSAALKIGAVLGDA 187
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
Q L +G+ +G+AFQL DD LD G GKNIG D K T +I A
Sbjct: 188 SEEDAQKLYDFGIKMGLAFQLQDDFLDVYGNPKVFGKNIGGDILCNKKTFMLINALTLAD 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DS 304
++ + I+ E KA + + + E + +Y + L + S
Sbjct: 248 GHQRKELEKWISSTDFYPEEKIKAVTELYDKIGIGRICEEKINAYYAEGLSLLESIAMPS 307
Query: 305 SWKKSLMEVVDFCLQRL 321
K+ L V + R
Sbjct: 308 GKKEELKSFVCHLMNRK 324
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 132/329 (40%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++ + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 10 DFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGSDS 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+N + A AIE IHT +L+HDD+ LRRG+ V+G ++L GD LL++AF
Sbjct: 70 ENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRAFE 129
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV + L V G + S+ V + + KT
Sbjct: 130 MVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKTGA 189
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++ +LI G + AL +Y +G+AFQ+VDD+LD +GK G+D
Sbjct: 190 LLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSEVLGKTAGKDLLA 249
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ +A
Sbjct: 250 DKSTYPKLL--------------------------------------GLDESRKKAKELI 271
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+K+KD + P S L+ + D+ + R
Sbjct: 272 RKSKDVIH--PWSDKAAPLLSLADYIINR 298
>gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
Length = 354
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 13/304 (4%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ D + L+ GGKR R +L L ++ AC E +H T++ DDV D +A
Sbjct: 49 LSDPLWDLLDRGGKRWRAVLFLVFIEGFGEDPTEYMPYACIPEILHNGTIIVDDVEDQAA 108
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLS---------QAFCMVIETKSQEALEALSLVACTL 140
RRG+ A ++G ++ G+ L + + + L L
Sbjct: 109 KRRGEPALHHIYGRDVALNAGNALYFLPLKLLRENPGDLPAEQQLAAYEMLMDELNRTHL 168
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
+G + + +T YL + KT L ++++I V +A+ +Y
Sbjct: 169 GQGMDICWHNEREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAVATYAEL 228
Query: 201 LGIAFQLVDDVLDYRGE---VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+AFQ+ DD+LD E GK G D R GK TL VI A + + + +
Sbjct: 229 TAVAFQIGDDILDVENSLGRAGEFGKEFGNDVREGKKTLLVIHAIEESEPAKAARLQEIL 288
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
+ E + +A I+ E ++ RA +A+ + L ++ + L +F
Sbjct: 289 EAETNTDEEVLEALSILEEAGSIEYARERALDLAAEARAEIAGLELNAETTEQLHTFTEF 348
Query: 317 CLQR 320
+ R
Sbjct: 349 VVDR 352
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 134/331 (40%), Gaps = 50/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ + +VN + + + I + ++Y + +GGKR+RP+L +A+ ++
Sbjct: 74 EFKEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDE 133
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK + ++G T+VL GD LLS AF
Sbjct: 134 GLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFE 193
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
V + + + L + ++ + + + + KTA
Sbjct: 194 HVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTAK 253
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L AA+ +++ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D +
Sbjct: 254 LLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 313
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P ++ + + + A
Sbjct: 314 DKATYPKLM--------------------------------------GIDEAKKFAAQLV 335
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L L ++ R N
Sbjct: 336 DEANQGLAFFDHVKA-APLYHFANYIATRQN 365
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E V + K I I D ++Y + +GGKR+RP+L LA+ + + + ACA+
Sbjct: 19 EIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACAL 78
Query: 72 EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ RRGK +++G ++L GD LL+ AF +
Sbjct: 79 EMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVP 138
Query: 130 LEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + V +A ++ LS D T E + KT L AA+
Sbjct: 139 ADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+AG + Y N+G+AFQ++DDVLD ++GK+IG+D + K T P
Sbjct: 199 ALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFW 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ +A ++AK+ +
Sbjct: 259 --------------------------------------GVEESIKQAELLVEEAKEEILY 280
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + L+ + DF + R N
Sbjct: 281 FDNKAI--PLIAIADFIVNRNN 300
>gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
Length = 324
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + V Y++ GGKR+RP+L L + + + A
Sbjct: 8 LKKINSHIADLKFTRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDIVRAYGPAIG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + + +
Sbjct: 68 IEVYHNYTLLHDDLMDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQYMAQCPAGYLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV E +YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMEFELRKDVKEGEYLEMIRLKTSVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++GMNLGIAFQL DD+LD G+ GKNIG D K T +I AF+
Sbjct: 188 AEDAEHLYNFGMNLGIAFQLKDDLLDVYGDAAIFGKNIGGDILCNKKTYMLIKAFEHADD 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
R+ K ++ G E + + + E + Y ++A ++L + +
Sbjct: 248 RQLQQLKVWVDAGSFEPAEKIAAVTDLYNQIGIKEICEKKMAEYSERAMENLVAVKVADE 307
Query: 307 -KKSLMEVVDFCLQR 320
KK L ++ + R
Sbjct: 308 KKKELEILMGNLMNR 322
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 56/322 (17%)
Query: 15 VNFLILKRI--CSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V+ + + + S+ I + + Y +F+GGKRLRP+LTLA + + ACAI
Sbjct: 14 VDQKLQEYLPNKSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKTILPFACAI 73
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ D+ LRRGK +V+G ++L GD LL+ AF ++ +
Sbjct: 74 ELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYAFELMTSKGVENF 133
Query: 130 LEALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+A + + + G++ + KN D+ E ++ K KT LF+A++
Sbjct: 134 TDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHKHKTGALFTASIR 193
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++++ + + L +Y LG+AFQ+VDD+LD G+ ++GK +G+D N K T P
Sbjct: 194 IGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQKLGKTVGKDDDNEKATYPK 253
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L ++ A +A ++
Sbjct: 254 IM--------------------------------------GLKESHEYASRLHHEALTAI 275
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L E+ + + R
Sbjct: 276 SDY--GEEANILRELANKIVNR 295
>gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1);
farnesyltranstransferase [Arabidopsis thaliana]
gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1,
chloroplastic; Short=GGPP synthase 1; Short=GGPS1;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1;
AltName: Full=Dimethylallyltranstransferase 1; AltName:
Full=Farnesyl diphosphate synthase 1; AltName:
Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 55/326 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 85 ELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAV 144
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +VL GD LLS AF + S +
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDV 204
Query: 130 LEALSLVACTLA-------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +V + DV E + KTA L A+
Sbjct: 205 VSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEAS 264
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T
Sbjct: 265 AVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTY 324
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P I+ L + A ++A+D
Sbjct: 325 PKIM--------------------------------------GLEKSREFAEKLNREARD 346
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L DS L+ + ++ R N
Sbjct: 347 QLLGF-DSDKVAPLLALANYIAYRQN 371
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 134/333 (40%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + V + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 21 DFKAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDP 80
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++AF
Sbjct: 81 ALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFE 140
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L V L+ + + E + + KT
Sbjct: 141 MVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEYIHLHKTGA 200
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LI G + +L++Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 201 LLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIA 260
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 261 DKTTYPKLL--------------------------------------GLEESRLRAKGLI 282
Query: 292 QKAKDSLRCLPD----SSWKKSLMEVVDFCLQR 320
Q+AK SL S L+ + D+ + R
Sbjct: 283 QEAKTSLDAFKPVGGGSVQAAPLLALADYVIGR 315
>gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
Length = 298
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 52/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ +++ L V + + E + ++Y + +GGKRLRP+L L A +
Sbjct: 3 LSAIKEDLLASARHVEGFLRTSLHGRGVPERLLTSMEYSLLAGGKRLRPVLCLKWAKLCG 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A ++E IHT +L+HDD+ +D+ LRRGK + + T++L GD LL++
Sbjct: 63 LDMEKAMPFAASLELIHTYSLIHDDLPAMDNDDLRRGKPSNHKQFDEATAILAGDGLLTE 122
Query: 117 AFCMVIE---------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF ++ + A + A + G+ + + ++ + +
Sbjct: 123 AFSLMAQAAESLPAERVVCAMKAVAAAAGAGGMVGGQALDMEYTGKAGISLDQLQTMHAM 182
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A +++AG + SV + +YG +G+AFQ+ DD+LD G E+GK +G
Sbjct: 183 KTGALIRVACLSGAMLAGSKASVLEKASTYGAAIGVAFQIADDILDVVGNEQEIGKPVGS 242
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L ++ A
Sbjct: 243 DEQAGKNTYPSLV--------------------------------------GLAESHRLA 264
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Y +A + L S L ++ + ++R++
Sbjct: 265 RLYVDRAVECLEEYSTSEA-DFLRQLAFYIVERVS 298
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 128/336 (38%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVE-MIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ED +V + K + S + + ++Y + GGKRLRP+LT + + +
Sbjct: 1 MSSTEDWVNALQARVEQALEKTLPPASKPPKRLHEAMRYAVLGGGKRLRPLLTYSAGMAV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLS 115
A A+E IH +L+HDD+ LRRG+ +G T++L GD L +
Sbjct: 61 GVAEAALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQA 120
Query: 116 QAFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ E S E + + +A G+ L E
Sbjct: 121 LAFRILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRL 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ ++ L + + + L + +G+AFQ+ DDVLD + +GK G
Sbjct: 181 KTGALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D KPT P +L L+ + R
Sbjct: 241 SDKAQDKPTYPSLL--------------------------------------GLIQAKAR 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A S + A +LR + S + L + DF ++R +
Sbjct: 263 AQSLLEDAHQALRAIDAS--TEHLEWLADFIVKRRH 296
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 140/331 (42%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + + + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 ISDFDKYLKETKKIVEEALDLSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + ++IAG + + +AL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ RA+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKRAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KAK ++ P + L+ + DF R
Sbjct: 270 LVDKAKKAIE--PWGLDAQYLISLADFITNR 298
>gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase; OPP synthetase) [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 317
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 84/305 (27%), Positives = 139/305 (45%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ K + + I D+ ++ + K +I SGGKR+RP + + + + +
Sbjct: 7 IQSVLSKFDKNLDSIIHEDIPILKKIKKQVITSGGKRIRPFSHYLFCQFMNVKDVSWLDV 66
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E IH A+LLHDDVVD++ +RRGK +GN+T++L GD+LL+ + +
Sbjct: 67 GSVAELIHAASLLHDDVVDNAPIRRGKPTIGASFGNKTAILAGDYLLACGISRLNSLGNP 126
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ +E S V L+ EL Q+ KN ++T + Y +I KTA LF E ++++A
Sbjct: 127 DLMEIFSQVLRDLSVSELLQMEWEKNPNITLKIYDQIIYGKTASLFGVCTEAAAILANQS 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
R+ + +G+ LG FQ DD LDY + GK +DF+NG T PV++ +
Sbjct: 187 KEKRKEFRQFGVRLGKLFQKKDDCLDYFEDSKASGKEFLKDFKNGLFTYPVLVLRSKLNL 246
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
EK V++ +M + S L P S +
Sbjct: 247 LEKRKLNRLFQKEIRDVKDESIILDLMNSKKIPAILHKELESEKNDLLRFLNQFPKSEER 306
Query: 308 KSLME 312
+ +E
Sbjct: 307 ELFIE 311
>gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 325
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 7/314 (2%)
Query: 15 VNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
V + + + + D ++Y++ GK++RP+LTL A + + V A AIE
Sbjct: 11 VQEALTAAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE- 131
+ H +L+HDD++D + LRRG++ W + ++L GD LL +A+ V + + L+
Sbjct: 71 YFHNFSLIHDDIMDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLDL 130
Query: 132 --ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ VA + EG+ + VTE YLH+I+ KT+VL AL + ++I
Sbjct: 131 LTTFNKVATEVCEGQQLDMDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVE 190
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ + +G+N+GIAFQL DD+LD G+ GK +G D K T +I + ++ +
Sbjct: 191 QQELIYDFGVNVGIAFQLQDDILDVYGDPETFGKQVGGDIIANKKTFLLIKLLEYASETD 250
Query: 250 -KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWK 307
+ D + + ++ + + + A D+L + S K
Sbjct: 251 LPHIQNLLTADLEQEPDKVELMKQFYAKYDISTLANRKKEYFTTLAFDTLAKINAPSERK 310
Query: 308 KSLMEVVDFCLQRL 321
L+ + + L R+
Sbjct: 311 AELITLAENLLNRI 324
>gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
Length = 324
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + V+Y + GGKR+RP+L L + + A A
Sbjct: 8 LDKINKYIADIQFTRTPKGLYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPAAA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D S +RRGK VW + T+VL GD +L AF + ++
Sbjct: 68 IEVYHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPAEHLK 127
Query: 131 EALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + EG+ + DVTE++Y+ +I+ KTAVL + +L++ +++AG
Sbjct: 128 EVMDLFSLTMLEICEGQQLDMEFESRGDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGAT 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT- 246
+ L +GM +G+AFQL DD+LD G+ GK IG D K T +I A R
Sbjct: 188 AEDAENLYKFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALDRADA 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
K+ + + + E +K + + E + Y A +SL +
Sbjct: 248 KQREELNRWLDAETCQPAEKIKAVTELYNQLDIRSVCENKMRGYYTLAMESLAAVGVAEE 307
Query: 306 WKKSLMEVVDFCLQR 320
KK L +V + R
Sbjct: 308 RKKELKNLVKLLMYR 322
>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
Length = 290
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 131/316 (41%), Gaps = 51/316 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
+N I + S + + D + Y + +GGKRLRP+L L +A + + V +A A E
Sbjct: 14 INEQIKRLTPSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATE 73
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
FIHT +L+HDD+ LRRGK +V+G ++L GD L S AF ++ + ++
Sbjct: 74 FIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPD 133
Query: 131 ------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
LS + + + + D + KTA + ++ ++A
Sbjct: 134 KLLKVINILSHGTGIYGMVGGQAADILHEKENSFNDINFIHTHKTAKFIQSCCQMGGVLA 193
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+LK+YG+ +G+AFQ+ DD+LD G+ ++GK +D K T P I
Sbjct: 194 DATEEEEISLKNYGLYIGLAFQIQDDILDEIGDEKKLGKKTKKDRDKNKLTYPSIY---- 249
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ +++ A Y +KA + L
Sbjct: 250 ----------------------------------GIEESKRIAREYVEKAVSEVEKLKRP 275
Query: 305 SWKKSLMEVVDFCLQR 320
L+E+ F + R
Sbjct: 276 E---ILIEIAKFIINR 288
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ VN + + + I + ++Y + +GGKR+RP+L LA ++
Sbjct: 74 DFKSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLAACELVGGSE 133
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK +V+G +VL GD LL+ AF
Sbjct: 134 SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAFAFE 193
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + LA+ ++ + +V E + KTA
Sbjct: 194 HIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHIHKTA 253
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D
Sbjct: 254 KLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLV 313
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 314 ADKVTYPKLM--------------------------------------GIEKSREFAEKL 335
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A++ L L+ + ++ R N
Sbjct: 336 LNEARELLAGFDQEKA-APLIALANYIAYRQN 366
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + I I + ++Y + +GGKR+RP+L LAT M+
Sbjct: 18 NLVAYLKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCEMMGGTI 77
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ AF
Sbjct: 78 EMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKT 169
+V L+L ++ L D++ E + + KT
Sbjct: 138 LVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNFIHRHKT 197
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ L A + +IAG Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 198 SALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAGKDQ 257
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P + L ++ +A
Sbjct: 258 KAKKVTYPSLW--------------------------------------GLEESRLKAQE 279
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L D + K L + F R N
Sbjct: 280 LVKVACAELEPFGDRA--KPLQAIAHFITSRNN 310
>gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 340
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 66/339 (19%), Positives = 124/339 (36%), Gaps = 19/339 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K + I I + E +V+ I G RP+L + T M
Sbjct: 2 EFSEYVAKRRNAIYSKITDYIPLQEPEEHYKIVREYIDRQGNYRRPILLMLTGEMFGAPI 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V LA A + L+ DD +DDS RRG ++G ++ D + + ++
Sbjct: 62 EKLVQLAAAQQLSEEWLLIQDDAMDDSEFRRGGPTLHKMYGWIHAINASDTINVTMWKIL 121
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK------------SKT 169
+ + + + + + + + + + K
Sbjct: 122 KDYIMKFDPKNGNAIYDKFYDMIKYTIEGQYIENKFINNTKDLSKASESMYFRIADGKTC 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+++ ++ AG A K G N GIAFQ++DD+LD G+ GK D
Sbjct: 182 YYTIYGPMQIGAMAAGAPEKAISAFKEIGTNTGIAFQIMDDILDMAGDEKTFGKKRYGDL 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDG--KISVENLKKAFIIMRENRALVDTEYRA 287
GK TL V+ A+ + + E+ + + E + I+++ + A
Sbjct: 242 YEGKLTLIVLHAYGKASPEERKKIDAIYRKSRSDKTEEEINWLVEIIKKYGGIEYAMKVA 301
Query: 288 YSYGQKAKDSL----RCLPDSSWKKSLMEVVDFCLQRLN 322
YG+ A+ +L PD+ +K L + +R +
Sbjct: 302 DHYGELAEKALQDNMDLFPDNEYKNILKSAIQAQYKRKS 340
>gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH]
Length = 297
Score = 99.3 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 2/291 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA +
Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGEHTSQKHVLAAVV 60
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E
Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG
Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT +
Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ I G F + + AL T A Q A ++ P
Sbjct: 241 LAREAIEHGGTD--RFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFP 289
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 132/333 (39%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
E + E+VN + + I + ++Y + +GGKR+RP+L +A+ ++
Sbjct: 67 DFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYSLLAGGKRVRPLLCIASCELVGGDE 126
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 127 RTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLALAFE 186
Query: 120 M---------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + L G++ + +V E ++ KTA
Sbjct: 187 HVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHLHKTA 246
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L AA+ + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D
Sbjct: 247 ALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLL 306
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 307 TDKTTYPKLL--------------------------------------GLEKSREFAEKL 328
Query: 291 GQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
A D L + + L+ + ++ R N
Sbjct: 329 RADACDQLVGFD--PARAAPLIALANYIAYRNN 359
>gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 325
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 5/315 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66
+ ++ +LK + + + + L+ SGGK LRP + E D
Sbjct: 12 IQLKLIQLEPYLLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGEKIPADKLRA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125
A AIE +H ATL+HDDV+D S LRRG +G + ++ GD+L + F ++ T
Sbjct: 72 GAAAIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTH 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L+ T+ GEL Q++ + D++++DY H I KTA LF + E S+++
Sbjct: 132 DATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTH 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
++ G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q
Sbjct: 192 APRNIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTA 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++KK I+ ++ L A QKA + LP+ +
Sbjct: 252 G---TQLAPLLGKKQDLKEADIKKIQKIVIKSGGLKRAHEIANQLTQKALALINRLPEQN 308
Query: 306 WKKSLMEVVDFCLQR 320
KK L + + LQR
Sbjct: 309 SKKELRRLTNLLLQR 323
>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 295
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L + +++N + +++ S + + ++Y + GGKR+RP L AT ML
Sbjct: 1 MYQLSQDLPQLQQRINTFLAQQLNVDSSPSPLAEAMRYGVLLGGKRIRPFLVYATGRMLG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A ++E +H +L+HDD+ LRRG+ + + + T++L GD L +
Sbjct: 61 ADLNQLDYAAASVEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDALQAF 120
Query: 117 AFCMVIETKSQEALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ + + +A + +S+ ++ + + ++KT
Sbjct: 121 AFEILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIHRNKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ SAA+++ + + + Q L+ Y +G+AFQ+ DD+LD GE + +GK +G
Sbjct: 181 GAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P +L L + +A
Sbjct: 241 DLLADKSTYPKLL--------------------------------------GLAGAKQKA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 263 QELYQNAIAELESIP--FDTSALRAIAEFVVNRKS 295
>gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae]
Length = 337
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 14/304 (4%)
Query: 31 PDVVKYL--IFSGG--------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
+ I +GG K +RP L L +A + + + A A+E +H +L+
Sbjct: 32 HQAAYHFGWITAGGAPTSADAGKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLV 91
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVA 137
HDD++D RR + +WG +++L GD +L+ A + A L+
Sbjct: 92 HDDLMDGDEERRHRRTVWKLWGPSSAILTGDAMLALAQEVLLDTGLPTAASAARLLARTT 151
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
L G+++ L+ + VT E+ + + KT L SA+ + +++AG + AL Y
Sbjct: 152 RHLIRGQVQDLAFEQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALY 211
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G+AFQLVDDVL G+ GK + D R+ K TLPV A +
Sbjct: 212 GDQVGVAFQLVDDVLGIWGDPAVTGKPVHSDLRSRKKTLPVSHALNQEGPLGDELATWLT 271
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
G+ E L++ ++ + A A+++L + ++ + L+ + F
Sbjct: 272 ARGRPDEEELRRVARLVEDAGGRRWALAEAARRMALAEEALCGVELEAGARDELLALGRF 331
Query: 317 CLQR 320
+ R
Sbjct: 332 VVDR 335
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 71/325 (21%), Positives = 130/325 (40%), Gaps = 56/325 (17%)
Query: 14 KVNFLIL----KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
V + K + +D + + ++Y + +GGKR+RP+L +A L+ + L
Sbjct: 19 AVEQFLESLFVKELGTDYGTLAESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLA 78
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+E IHT +L+HDD+ LRRGK +++G+ T++L GD LL+ AF ++ +
Sbjct: 79 PLELIHTYSLIHDDLPSMDDDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYD 138
Query: 128 EALEALSLVACTL----------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G + S+ + + + KT L A+L
Sbjct: 139 KLVSFEIRLKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASL 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +L+ +S + L YG +GIAFQ+ DD+LD G+ +GK +D K T P
Sbjct: 199 RIGALLGKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYP 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + A +A ++
Sbjct: 259 GLM--------------------------------------GVEKARNMARHKLNEALEA 280
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K L E+ + ++R N
Sbjct: 281 IGSF--GEKAKHLRELASYIIERRN 303
>gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu002]
gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu003]
gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu004]
gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu005]
gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu006]
gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu007]
gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu008]
gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu009]
gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu002]
gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu003]
gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu004]
gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu005]
gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu006]
gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu007]
gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu008]
gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu009]
Length = 333
Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 19 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A +
Sbjct: 79 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLA 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
EA ++ L G++R + T E YL V+ KT L +A+ ++ +
Sbjct: 139 S-RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++G + + G +G AF++ D++ G+ G D TLP+ A
Sbjct: 198 ALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA---TLSGADLGQAVHTLPMPYA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ T + G I +++ +A ++R + + + +Y +A++ L L
Sbjct: 255 LREQTPDTSRLRELL--AGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYL 312
Query: 302 PDSSWKKSLMEVVDFCLQ 319
PD +++L ++D +
Sbjct: 313 PDRQPRRALATLIDHAVS 330
>gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
Length = 324
Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 8/317 (2%)
Query: 12 MEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN + + + +KY++ GGKR+RP+L + + + + + ACA
Sbjct: 8 LTIVNEYLNNLPYNRKPSSLYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSSACA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E H TLLHDD++D++ LRRG+ W N ++L GD +L A+ + + ++
Sbjct: 68 LETYHNYTLLHDDLMDEAPLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQVDTKHLQ 127
Query: 131 ---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ A + EG+ + DVT ++Y+ +I+ KT+VL + A ++ +L+A
Sbjct: 128 AVLNLFTETALQIGEGQQYDMEFEHRNDVTVDEYIEMIRLKTSVLLACATKMGALLADAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G +G+AFQL DD LD G+ GK IG D + K T +I AF
Sbjct: 188 AEDAENLYKFGEQIGLAFQLQDDYLDVYGDSKVFGKKIGGDITSNKKTYMLITAFNLAND 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDS 304
+++ + + E + + E + + Y ++ K L+ LP+
Sbjct: 248 KQRAELEEWINKTAFDTEEKIAAVTRLYNEIGVDKLAKEKMDYYYEQGKQYLQAVKLPEE 307
Query: 305 SWKKSLMEVVDFCLQRL 321
K+ L D + R
Sbjct: 308 QKKELLAYAAD-MMSRQ 323
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 53/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKR--ICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + + V + + S +E + + +Y +F+GGKRLRP+L LA A +
Sbjct: 4 DLKLYLAERKQLVEDALEDCFPVPSGLEKSVLEAARYSLFAGGKRLRPILCLAAAEVAGG 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IHT +L+HDD+ +D+ RRGK V+G +VL GD LL++A
Sbjct: 64 SREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGDALLTEA 123
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKT 169
F V + + V TL + + + E + ++ KT
Sbjct: 124 FDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATVEYMHIHKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L SA+LEV +L+ G ++ +LK YG +LG+AFQ+ DD+LD G+ EMGK G D
Sbjct: 184 GALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGKKPGSDA 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ + + A
Sbjct: 244 AKNKKTYP----------------------------------ALL----GITRSREAARE 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A +L D + + L + + L R
Sbjct: 266 HVDAALQALAAFDDRA--EPLRAIARYLLVRK 295
>gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 313
Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 15/322 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+K +E L K ++ + + + ++ +VV+Y + GKR+R + +
Sbjct: 5 LKDIEALMEKRASIIDSRLNALAYAIEPMLLSEVVRYALSLKGKRIRTTVLTLSCEAAGG 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A A+E +H +L+ DD++D S +RRGK WGN+ +++ D +LS A
Sbjct: 65 DMERAMAPAMAVEMLHNTSLVLDDIIDKSDIRRGKATINNRWGNEMALIACDVMLSLAIR 124
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + + VA ++ + + T +DY + KTA LFSA+ E
Sbjct: 125 EITRSDLGLTKQMIDCVADSMLRLAEGEALELEKKKFTIDDYYKIADKKTASLFSASAES 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L+ +AL+ YG +LG+AFQ DD+LD+ G ++GK D + +PTL +I
Sbjct: 185 GALVGNADQKYVKALQQYGRSLGLAFQARDDILDFTGTE-QIGKTAFLDLKMNRPTLVMI 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
LA G RE L + + + ++ + +A ++AK L
Sbjct: 244 LAADDGFSREDMLGMGR-------DRLLGELEPYIEKAGSI--SREKA----EEAKRYLD 290
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+P+S + L + ++ + R
Sbjct: 291 VIPESLARDRLEILCEYVVSRK 312
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 49/318 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+V + + + + + ++Y + +GGKRLRP+L LA + + + A A+E
Sbjct: 40 RVEAALDAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGESERAMPTAVALE 99
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+H +DD LRRG+ V+G ++L GD LL++AF MV S
Sbjct: 100 MIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDALLTRAFEMVALRSSGVPP 159
Query: 131 EA--------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E G + V + ++ KT L A + +L
Sbjct: 160 ERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIHLHKTGALLRACVLCGAL 219
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IAG +++ AL++Y +G+AFQ++DD+LD +GK G+D K T P +L
Sbjct: 220 IAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLL-- 277
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L ++ RA + +AK++L
Sbjct: 278 ------------------------------------GLEESRQRAQALVLEAKEALAPFA 301
Query: 303 DSSWKKSLMEVVDFCLQR 320
L+ + D+ R
Sbjct: 302 AGGRAAPLLALADYITSR 319
>gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
Length = 347
Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 79/344 (22%), Positives = 137/344 (39%), Gaps = 26/344 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRI----------CSD------VEMIPDVVKYLIFSGGKRLR 46
D + + V I++ + S+ + + + GGKR+R
Sbjct: 2 NFADYLKQKLPAVEAEIMRGLPAASTSPANASSERTHADLNTYLYQPLAHFSAGGGKRVR 61
Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
P+L A + + + + CAIE +A L+HDD+ D S LRRG+ G +
Sbjct: 62 PVLCCLGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIADKSELRRGEKCLYKTLGTGLA 121
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+ VGD L V + ++ L+ E + +L + + V
Sbjct: 122 INVGDSALVNVVRRVTVADHLSDQIKVRVIDALLSMEEHTLEGQALDLGWAQNERWDVTS 181
Query: 167 SKT---------AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ + L + +LI G ALK +G+ +G+AFQL DD+L+ G+
Sbjct: 182 DQYLFMALSKTAYYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQLQDDLLNLVGD 241
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
E GK+ D GK TL V+ A + +K S ++ L+ A +M
Sbjct: 242 AKEQGKDFRSDITEGKRTLAVVYALEHLGSADKAELVSILSAHTTDTLRLQHAVELMESV 301
Query: 278 RALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
A+ RA + ++AK L + + +L+ + DF + R
Sbjct: 302 NAIKFVRTRALALVEEAKLVLKNVILTEDARDTLLSMADFFVNR 345
>gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
acidophilum DSM 1728]
gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
acidophilum]
Length = 354
Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 136/337 (40%), Gaps = 28/337 (8%)
Query: 14 KVNFLI-----LKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+++ I K + ++ + +++ GGKRLRP+ + + +
Sbjct: 18 RIDERISRFFDRKEAETKDDLSRRVIRMIREYTEGGGKRLRPIFLVLGYRLFADENNAIF 77
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR--------------LVWGNQTSVLVGD 111
+ +IE + L+HDDV+DDS LRRGK + G +++ GD
Sbjct: 78 DASISIELAQSYLLIHDDVIDDSDLRRGKPSMHIRLWRSFFPESEKGKKMGEGLAIVAGD 137
Query: 112 FLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+ A +I + + L+ G+ + D E D + +
Sbjct: 138 LAETYAHESLINSDFDPSLLLLADMELTKTIEMTGYGQFLDVVSGTLNDFRENDLIRLHL 197
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA + ++ L+ +G LGIAFQL DD+L G+ GK+I
Sbjct: 198 WKTARYTLEGPLAMGALLSGRHDQIMDLRLFGRTLGIAFQLKDDILGLFGDEATTGKSIY 257
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK TL +I A + +++ F + G ++ E ++ I+ ++ + +
Sbjct: 258 SDVNEGKRTLLMIKAMEFSDRQDAEFIDRILRRGNVTQEEFERIRNIVMKSGSYDYSVKL 317
Query: 287 AYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
S K+K+ L + +S K L + D+ + R +
Sbjct: 318 MDSLVAKSKEYLNRIRGNSCAKTYLSWLSDYLVARDH 354
>gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDV 84
+ I + Y GK +RP++ A L + +A E IHT +L+HDDV
Sbjct: 48 DEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV 107
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+D S RRGK +A WG +V+ G++++S + ++ +S E + +S + L GE
Sbjct: 108 IDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRIIEDLIYGE 167
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGI 203
L QL + A + + Q V+QA ++G LGI
Sbjct: 168 LCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGI 227
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DD LD+ + ++GK D + G T PV+ + + + S
Sbjct: 228 AFQIQDDRLDFLADSEQLGKPACADLKLGLSTAPVL----YACQTHEGEMWPLMKRRFTS 283
Query: 264 VENLKKAFIIM-RENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+++KA I+ R + AL+ T A +Y ++A + L D K++L+E+ R
Sbjct: 284 PGDVQKAHNIITRRSDALLKTRLLAENYAKRAAREIDMLTADPVLKENLLELTKMVTNR 342
>gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon GZfos27B6]
Length = 360
Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + + + L+ GGKRLRP L L ++ + A I
Sbjct: 32 AIFEDAYKRNLEGRGPDTLYKPIIDLLGRGGKRLRPSLCLMACELVGGEIKKALPTAICI 91
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----- 126
EF H +L HDD+ DDS LRRG+ A + +G +V GD L + ++ + ++
Sbjct: 92 EFFHNFSLAHDDIEDDSKLRRGEPALHVKYGIPIAVNAGDGLYALSYEALKANRNLLGLE 151
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E ++ + L+EG+ L + ++ E + + ++ KTA LF + + ++
Sbjct: 152 RAWKIFEEIAELCVVLSEGQAMDLEFKERKEMGELEVIETLRKKTAKLFGVSAKCGAIAG 211
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + + L S ++GIAFQ+ DD+L+ GE + GK IGED GKPTL ++ +
Sbjct: 212 GASHETAEDLSSAWEDIGIAFQIRDDILNVLGEEEKYGKRIGEDIAEGKPTLLLVNCLEH 271
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ------------ 292
REK +++ + R+ ++ +E A Y +
Sbjct: 272 CEAREKENIYECF--HNYDKAKIEEVVDLFRKYGSIEHSEEIAMRYLRSGTDKIGKIDIR 329
Query: 293 -KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K K + ++ ++ + + ++R
Sbjct: 330 GKGKGEIEGKSREEIREYMVALAKYFVER 358
>gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDV 84
+ I + Y GK +RP++ A L + +A E IHT +L+HDDV
Sbjct: 48 DEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV 107
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+D S RRGK +A WG +V+ G++++S + ++ +S E + +S + L GE
Sbjct: 108 IDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRIIEDLIYGE 167
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGI 203
L QL + A + + Q V+QA ++G LGI
Sbjct: 168 LCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGI 227
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DD LD+ + ++GK D + G T PV+ + + + S
Sbjct: 228 AFQIQDDRLDFLADSEQLGKPACADLKLGLSTAPVL----YACQTHEGEMWPLMKRRFTS 283
Query: 264 VENLKKAFIIM-RENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+++KA I+ + + AL+ T A +Y ++A + L D K++L+E+ R
Sbjct: 284 PGDVQKAHNIITKRSDALLKTRLLAENYAKRAAREIDMLTADPVLKENLLELTKMVTNR 342
>gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
Length = 354
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 13/304 (4%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ D + L+ GGKR R ++ L ++ AC E +H T++ DDV D +
Sbjct: 49 LSDPIWDLLDRGGKRWRAVVCLLLLDGFGADPRAYLPYACIPEVLHNGTIIVDDVEDGAE 108
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLS---------QAFCMVIETKSQEALEALSLVACTL 140
+RRG+ A +G ++ G+ + A + + L L
Sbjct: 109 IRRGEPALHHRFGPDIALNAGNAMYFLPLKVIGKNPADLDPETQLATYEMLMDELNRTHL 168
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
+G +++ V E +YL + KT L ++++I V + + +Y +
Sbjct: 169 GQGMDIYWHRNRDATVAEAEYLEMCACKTGCLGRIVARLAAIITDQPPEVEREVAAYAED 228
Query: 201 LGIAFQLVDDVLDYRGE---VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+ IAFQ+ DD+LD E GK G D R GK TL VI A + S +
Sbjct: 229 MSIAFQIGDDILDVESTIEGTTEFGKAFGNDIREGKRTLMVIHALSAADPVAADRLSSIL 288
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
+ + + E + +A I++ ++ A S+ Q A++ LR +P D L +F
Sbjct: 289 HKPENTREEITEAIGILQSTDSIEYARECALSFSQSAREHLRDVPLDEERADQLASFTEF 348
Query: 317 CLQR 320
++R
Sbjct: 349 VIER 352
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ VN + + + I + ++Y + +GGKR+RP+L ++ ++
Sbjct: 90 DFKEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGTE 149
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD +D+ RRGK V+G T++L GD LLS AF
Sbjct: 150 EVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSFAFE 209
Query: 120 MVIETKSQEALEALS----------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + S+ + + L G++ ++ + V + + KT
Sbjct: 210 HIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTLEWIHIHKT 269
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
AVL ++ ++I+G ++ + ++ Y ++G+ FQ+VDD+LD E+GK G+D
Sbjct: 270 AVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDL 329
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P ++ L + A
Sbjct: 330 ISDKATYPKLM--------------------------------------GLEKAKQFASD 351
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK+ L C L+ + D+ R N
Sbjct: 352 LLIRAKEDLSCFDPMKA-APLLGLADYIAFRQN 383
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + MI + ++Y + +GGKR+RP+L L+ ++ + ACA+E
Sbjct: 89 VNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLCLSACELVGGDESVAMPAACAVEM 148
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF V +
Sbjct: 149 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAA 208
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ LA+ ++ + +V E + KTA L A++ + ++
Sbjct: 209 RIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTAALLEASVVLGAI 268
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + + L+S+ +G+ FQ VDD+LD E+GK G+D K T P ++
Sbjct: 269 LGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKDLVADKATYPRLM-- 326
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A ++A++ L
Sbjct: 327 ------------------------------------GIEKSREFAEKLNREAQEHLGGFD 350
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 351 PQKA-APLIALANYIAYRQN 369
>gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
Length = 303
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 39/306 (12%)
Query: 15 VNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
VN + + + + ++++I +GGKR RP++ L + + + +A A+E
Sbjct: 11 VNEALDNLVNEVDAIPKVKKALRHIIKAGGKRTRPIIVLLSGRLCGGEWSEVMNVALAVE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L HDDV+D +RR + + ++LVGD+L+S++ +V ++E +
Sbjct: 71 LIHTASLAHDDVIDRGVVRRNVETLHVKYDTSLAILVGDWLISKSVELVS-VYNEEVIRD 129
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ V +AEGE+ + KN EEDY I +KTA LF+ + + + I +
Sbjct: 130 FARVGMMMAEGEIMDIDSIKNGGFGEEDYFKCIAAKTASLFAYSAKNACRIVSDDKKAAE 189
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L +YG NLGIA+QLVDD+L+Y + TLP+I + G +
Sbjct: 190 YLFNYGNNLGIAYQLVDDLLEYLE------IFEDKKSEFESRTLPMIYEERYGFEE---- 239
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
A+ T Y ++ SL D K L+
Sbjct: 240 --------------------------AVARTLQLIREYANISRKSLDYFDDCESKDKLLA 273
Query: 313 VVDFCL 318
+VDF
Sbjct: 274 MVDFMT 279
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 85 ELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAV 144
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +VL GD LLS AF + S +
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDV 204
Query: 130 LEALSLVACTLA-------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +V + DV E + KTA L A+
Sbjct: 205 VSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEAS 264
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + + L+ + +G+ FQ+VDD+L E+GK G+D K T
Sbjct: 265 AVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELGKTAGKDLIADKLTY 324
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P I+ L + A ++A+D
Sbjct: 325 PKIM--------------------------------------GLEKSREFAEKLNREARD 346
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L DS L+ + ++ R N
Sbjct: 347 QLLGF-DSDKVAPLLALANYIAYRQN 371
>gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
Length = 303
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/325 (21%), Positives = 127/325 (39%), Gaps = 56/325 (17%)
Query: 14 KVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
V + +D + + ++Y + +GGKR+RP+L +A L ++ L
Sbjct: 19 AVEQFLDSLFVKEQRTDYGTLAESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIPLLA 78
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+E IHT +L+HDD+ LRRGK +++G+ T++L GD LL+ AF ++ +
Sbjct: 79 PLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYD 138
Query: 128 EALEALSLVACTL----------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G + S+ + + + KT L A+L
Sbjct: 139 KLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASL 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +L+ + + L YG +GIAFQ+ DD+LD G+ +GK +D K T P
Sbjct: 199 RIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYP 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + A +A D+
Sbjct: 259 GLM--------------------------------------GVEKARNMARHKLNEALDA 280
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K L E+ + ++R N
Sbjct: 281 ISSF--GEKAKHLRELASYIIERRN 303
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+I K + +V + I + + Y + SGGKRLRP+LTL ++ DN + A AIE
Sbjct: 15 EEIIKKYMPEEVGYQKTIMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIE 74
Query: 73 FIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ D+ LRRG+ V+G ++L GD LL+ A+ +++ +
Sbjct: 75 MIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKESIGKEN 134
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG----- 185
L A + V + I + + ++
Sbjct: 135 PERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGA 194
Query: 186 ----VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + Y +G+AFQ+VDD+LD G+ ++GK++G D N K T P ++
Sbjct: 195 AIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNKSTYPSLM- 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A + AK S+ +
Sbjct: 254 -------------------------------------GLEKSREIATELIEDAKRSISKV 276
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ L + D+ L R +
Sbjct: 277 --TDDTGFLDGLADYILSRDH 295
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ + + V + + + + E+I + ++Y +F+GGKRLRP+L L++ +L
Sbjct: 1 MFKEKLREKQQLVEKELHRILDIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGY 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSL----------SKNLDVTEEDYLHVIKSK 168
+++ + + ++ T S+N +T E+ + + K
Sbjct: 121 EVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L A++ + IAG AL+ Y +G AFQ+ DD+LD GE ++GK +G D
Sbjct: 181 TAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T I L ++
Sbjct: 241 REKGKFTFVNIFE--------------------------------------LEKSQEMVV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L + + L E+ ++ ++R+N
Sbjct: 263 ELTQNAVKILDRFGEKAL--FLKELSNYLIERVN 294
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E+ + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 ISDFEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + ++IAG QAL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ RA+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKRAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ AK +++ P + K L+ + DF R
Sbjct: 270 LVENAKKAIK--PWGADAKYLISLADFITNR 298
>gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 287
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 48/325 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+++ + +N + + + + + + ++Y + +GGKR+RP+L + A ++
Sbjct: 2 EFKNILKEKASFINKQLDRFVPRCIPEELSNAMRYSLEAGGKRIRPILVIECAKAVKEDV 61
Query: 61 -GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + +A + EFIHT +L+H +DD LRRGK V+G ++L GD LL+ A
Sbjct: 62 NVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTFA 121
Query: 118 FCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
F ++ K S E + + + + ++ +D + +KTA SA
Sbjct: 122 FELISNNKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKDVEFIHLNKTAKFLSA 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ ++A LK+YG+N+G+AFQ+ DD+LD G+ + GK + +D K T
Sbjct: 182 CCQIGCVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEKTGKRLHKDKDKNKIT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P + L + A Y +KAK
Sbjct: 242 YPSLY--------------------------------------GLEKSIQIAKDYVEKAK 263
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ ++ L +S + L+++ D+ + R
Sbjct: 264 NEIKDLKNSEF---LIKLADYIISR 285
>gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
Length = 325
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 5/316 (1%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHV 65
+++ V L+ + + + + + + + GK LR L LA A + E +
Sbjct: 11 YIQEELVAVKALMKSELQLKIPDVREKILAYMDAPGKYLRAGLCLAMAQLTPEGITQSKR 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIET 124
+A AIE +H ATL+HDDV+D++ RRG A + N+ ++ GD+L++ A +
Sbjct: 71 YIAAAIEVLHLATLIHDDVIDEADTRRGIEALHIQKSNRLAIYAGDYLMTYAARLIQKSQ 130
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + + V + GEL QL+ +T DYL I+ KTA+LF+AA
Sbjct: 131 QEFDRNPLDAWVMEGILIGELNQLANQYRQGMTMYDYLRQIRGKTALLFAAATFFGYYSL 190
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ G +G+AFQL DD++DY+ + GK +D +NG T P
Sbjct: 191 SQSALQNRQAFYLGQAIGMAFQLRDDLIDYQVDAKVSGKPRMQDVQNGIYTAP---LILG 247
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ S + L + + + + L +TE +Y KA+ LR L
Sbjct: 248 LQADPSLRQELKERGQPWSQQELDRLYQSLVDLGTLTETERLVDNYLAKAEKRLRGLGGK 307
Query: 305 SWKKSLMEVVDFCLQR 320
++L+ +++ ++R
Sbjct: 308 QESQALVNLLNQVMKR 323
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 80/329 (24%), Positives = 139/329 (42%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
E + + + + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 9 DFEKYLKQTKKVIEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEP 68
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
V A AIE IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++AF
Sbjct: 69 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFE 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV L V L+ + + E + + KT
Sbjct: 129 MVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKTGA 188
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + ++IAG + QAL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 189 LLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 248
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L + +++ RA+
Sbjct: 249 DKTTYPKLL--------------------------------------GMEESKKRAFDLV 270
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK ++ P + L+ + DF R
Sbjct: 271 EKAKKAIE--PWGADANHLISLADFITNR 297
>gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 28/337 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATAL-------- 55
L ++ V + + ++V ++ +Y G GKR RP + L +
Sbjct: 10 SLVADELRVVANRMRSMVTAEVSVLSLAAEYFFKMGVEGKRFRPTVLLLMSTLLMTSPAH 69
Query: 56 -----MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ + +A IE IH A+LLHDDV+D + RRG + V
Sbjct: 70 GLQDLIFDDLRFRQQRIAEIIEMIHVASLLHDDVLDHADTRRGISSLN--HAMGNKVCAA 127
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
FLL++A + ++ + +E LS V L GE+ QLS + KTA
Sbjct: 128 IFLLARASVTLSSLRNTQVVELLSQVLEHLVTGEIMQLSSEYKNMSNFDVISWKTFYKTA 187
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + + +++AG V YG +LG+A+QLVDD L+Y G +GK+ D
Sbjct: 188 SLMANSCKSIAVLAGQPEEVANRAFDYGRHLGLAYQLVDDALNYTGTTKTLGKSALSDLG 247
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G T PV+ A + + I + + +A ++++++ + T A +
Sbjct: 248 QGVVTAPVLFALHQFPE-----MSKLIQLKFKTATDRNQAVEMVKQSQGVAQTLAFATVH 302
Query: 291 GQKAKDSLRCLPDS------SWKKSLMEVVDFCLQRL 321
QKA D++ LP + +++L+E+ + R
Sbjct: 303 AQKAVDAIISLPPNSSLYVQQCRRALIEIAHQVITRS 339
>gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+N + I + I + ++Y + +GGKR+RP L LA ++ + ACA+E
Sbjct: 90 INQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEM 149
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK +V+G +VL GD LL+ AF + + +
Sbjct: 150 IHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSA 209
Query: 132 ALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ LA+ ++ ++ + +V E + KTA L A+ + ++
Sbjct: 210 RIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAI 269
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 270 LGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL-- 327
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A ++A++ L
Sbjct: 328 ------------------------------------GIEKSREFAEKLNKEAQEQLAGFD 351
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 352 PEKA-APLIALANYIAHRQN 370
>gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15]
Length = 298
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 125/335 (37%), Gaps = 57/335 (17%)
Query: 5 EDLTLKDM-----EKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
++L D +V+ + + I S + + ++Y + GGKR+RP L LA A +
Sbjct: 4 KNLLASDFLETCRARVDAELDRCITRDSASGRLQEAMRYSVLGGGKRIRPALCLAAAKAM 63
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
GD ++ AC++E IH +L+HDD+ LRRG+ + + T++L GD L +
Sbjct: 64 GQTGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQA 123
Query: 116 QAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF + E L +V + G+ L +
Sbjct: 124 LAFGWLAEAPGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHK 183
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ ++ + V +L Y LG+AFQ+ DD+LD G+ +GK G
Sbjct: 184 TGALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGS 243
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT P ++ L
Sbjct: 244 DAARAKPTYP----------------------------------ALL----GLEGAREHL 265
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A+ SL+ L + D+ + R +
Sbjct: 266 ANLLEQAQQSLQAF--GPEADPLRAMADYVVARTH 298
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 83/332 (25%), Positives = 135/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + V + + + E I + ++Y + +GGKRLRP+L L T ++
Sbjct: 18 DLASYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTV 77
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+H +DD RRGK+ V+G ++L GD LLS AF
Sbjct: 78 EMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFE 137
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
V L L V L ++ L LDVT + + KT
Sbjct: 138 YVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIHKTG 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + + L Y N+G+AFQ++DD+LD E+GK G+D R
Sbjct: 198 ALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQR 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T P + L +++ +A +
Sbjct: 258 DKKATYPSLW--------------------------------------GLEESQKQAQAL 279
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + S+ + L + F + R N
Sbjct: 280 IDDAIAQVDPYGQSA--QPLKAIAQFIVARKN 309
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + I + ++Y I +GGKR+RP+L +A ++ + + ACA+
Sbjct: 6 DSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAV 65
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK +V+G +VL GD LL+ AF ++ + +
Sbjct: 66 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVP 125
Query: 130 LEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + V LA+ ++ + DV E + KTA L ++ +
Sbjct: 126 ADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLG 185
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + + L+ + +G FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 186 AILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLI 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + A ++A+D L
Sbjct: 246 --------------------------------------GLEKSREFAEKLNREAQDQLAA 267
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 268 FDIEKA-APLIALANYIAYRNN 288
>gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
Length = 337
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 4/283 (1%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +RP L L +A + + + A A+E +H +L+HDD++D RR + +W
Sbjct: 53 GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDLMDGDEERRHRRTVWKLW 112
Query: 102 GNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
G +++L GD +L+ A + A L+ L G+++ LS + VT
Sbjct: 113 GPSSAILTGDAMLALAQEVLLDTGLPTAAPAARLLARTTRHLIRGQVQDLSFEQRSHVTV 172
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
E+ + + KT L SA+ + +++AG + AL YG +G+AFQLVDDVL G+
Sbjct: 173 EECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDDVLGIWGDP 232
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
GK + D R+ K +LPV A + G+ E L++ ++
Sbjct: 233 AVTGKPVHSDLRSRKKSLPVSHALNQDGPLSDELAAWLTTPGEPGEEELRRVAGLIEGAG 292
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
A A+D+LR + D+ + L+ + F + R
Sbjct: 293 GRDWALAEAARRMALAEDTLRSIKLDAGARDGLLALGRFVVDR 335
>gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
Length = 312
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 109/321 (33%), Positives = 170/321 (52%), Gaps = 10/321 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M LE + + + + + SDV I + + L+ +GGKR+RP L + L
Sbjct: 1 MTDLEAP----LRRFEEALSELVQSDVLFIRLIHQDLVTAGGKRIRPRLVFLASRALGG- 55
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+E +H+ATLLHDD++DD+ RRGK AA +GN SVL GDFLLS+ +
Sbjct: 56 APFELELALAVELLHSATLLHDDLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSRLLHV 115
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +T E +E + VA TL+EGE+ Q ++ D + E+Y +I +KTAVL + A E
Sbjct: 116 IAKTGRMELVERFAEVAKTLSEGEVLQFQVAALEDYSLENYERIITAKTAVLMALATEGP 175
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+ G ++ VR+AL YG+ G AFQ+ DD LD G +GK +G D R GK TL +L
Sbjct: 176 ALLLGAESRVREALYRYGLLYGQAFQMRDDYLDLMGTPEVLGKPVGGDLREGKATLIPLL 235
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + +L++ + RE+ A + R + A +L
Sbjct: 236 LM-----ERYPEVREVLRRRAREAGDLERVRALARESGAAEEAVRRIRERAEAAAQALEA 290
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S ++++L E+ +R+
Sbjct: 291 LPPSPFREALRELALKEAERV 311
>gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
Length = 353
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 17/335 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ E+ + V L+ I S + + + +GGKR RP++ LA +
Sbjct: 20 ETFEEYLSSYAQVVGDLVNDFIPSGSHDGMDDYLYAPLLGYSRNGGKRHRPLICLAACVA 79
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V A AIE HTA L+HDD+ D++ LRRG+ L G ++ +GD LS
Sbjct: 80 VGGDVRRAVSSAAAIEHFHTAALIHDDIADEATLRRGEPCLHLTQGLGLAINMGDLGLSL 139
Query: 117 AFCMVIETK---SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL------HVIKS 167
V+ + ++ + Q D
Sbjct: 140 VNGTVVRDPLLEDGVKVRVIAELIEMTRRTIEGQALDLGWARDERYDITPEDYLVMATHK 199
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ L V +++ G + + L++YG++ G+AFQ+ DD+L+ G+ +GK+
Sbjct: 200 TAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDTGLAFQIQDDLLNIEGDPAVVGKDFCS 259
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK TL V+ A Q R ++ + L++A IMR + ++ A
Sbjct: 260 DITEGKRTLMVVHALQNSADR--GRLVDILSAKTTDADTLREAVAIMRASGSIDYARAYA 317
Query: 288 YSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRL 321
AKD L L S + L+ + D+ + RL
Sbjct: 318 EDLTNIAKDRLVGLIGPSPARSLLISMADYFVNRL 352
>gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1]
gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1]
Length = 365
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/351 (21%), Positives = 138/351 (39%), Gaps = 34/351 (9%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA---LMLEYRG 61
+ ++V+ K + S V IP + + GGKRLR L L
Sbjct: 16 NKTLQEIFDEVDVE-AKGVSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYWSRKWGYGNI 74
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-----LVGDFLLSQ 116
D+ L IEF+ + L+HDD++D+ +RRG + + + + +SQ
Sbjct: 75 DSIKYLMAGIEFLQSYLLVHDDIMDEDEIRRGGPTVHVWFDRKCREEGLISRCKHYGVSQ 134
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------------- 163
A + +S L A EL + V +L
Sbjct: 135 AIIVGDYLESLAVSMFTRLNLPDYALKELIKTYTRGVRLVAYGQFLDVLIANTPLKKVSE 194
Query: 164 ----VIKSKTAVLFSAALE---VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
I ++ L + N + L Y + GIAFQL DD+L G
Sbjct: 195 DDVYNIHMLKTASYTVELPLHLGAIASLMYNNELLMELSQYALPAGIAFQLQDDILGLYG 254
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG---KISVENLKKAFII 273
+ GK +G D R K TL ++ A+Q +K F + + +I+ E++++ I
Sbjct: 255 DPKVTGKPVGSDVREKKKTLLIVKAYQFADADDKKFLEELYDKRKPEEITDEDIRRVQSI 314
Query: 274 MRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+RE +L + + Y ++A+++L + + + + L +++ ++R +
Sbjct: 315 VRETGSLDYSVKKMNEYVERARNALRSSVIINETARNILEWLLELFIKRRH 365
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + I + ++Y + +GGKR+RPML +A ++ + ACA+
Sbjct: 95 KSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAV 154
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK + +G +VL GD LLS AF V
Sbjct: 155 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAP 214
Query: 130 LEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + V + L G++ + +V + + KTA L ++ +
Sbjct: 215 PERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLG 274
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 275 AILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLI 334
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ A ++A++ L
Sbjct: 335 --------------------------------------GVEKSKEFADRLNREAQEQLLH 356
Query: 301 LPDSSWKKS-LMEVVDFCLQRLN 322
+ + L+ + ++ R N
Sbjct: 357 F--HPHRAAPLIALANYIAYRDN 377
>gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
Length = 340
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 16/337 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L+ ++ ++ + + +V+++ +F+GGKR+RP+LTL A +
Sbjct: 4 EKLKKQLQAAAGQIETVMAADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAARLTTAA 63
Query: 57 --LEYRGD--------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+ + LA A E++HTA+LLHDDV+D +A RRG+ W +
Sbjct: 64 NHGGVPTEPPAADQATDQQRLAIAFEYLHTASLLHDDVIDHAAQRRGRETVNSRWDQGHA 123
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+L GDFL ++A + Q LE ++ + E Q + D E Y V++
Sbjct: 124 ILAGDFLHARAMWLAGNYGGQPCLELIASATEAMVAAEFLQAEAAAARDWRRETYFAVLE 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L +AA + + G QAL+ YG NLG+AFQ++DD+LD+ G+ GK +G
Sbjct: 184 GKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDDLLDFLGDPRATGKAVG 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + GK TLP++LA QR T ++ + + + L ++ E A
Sbjct: 244 NDLQEGKMTLPLLLAHQRATPEQRCWLEQLLAAEPARRQAELDTVRQLLTETDAFAGCRS 303
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L P ++ L + ++ LQR +
Sbjct: 304 QARELIATGLAGLEIFPAGGERELLQGLGEYVLQRDH 340
>gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
japonicus yFS275]
gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
japonicus yFS275]
Length = 381
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 37/347 (10%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--------- 57
L D+++V+ + + + +++ + D Y + GK+LRP L L + +
Sbjct: 39 LIRDDLKRVSPGMRRMLGCNLDHLQDASTYYTLAQGKQLRPSLVLLVSRAVSLLNGINRS 98
Query: 58 -----------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ + LA E IH A+LLHDDV+D + RRG+V+ +
Sbjct: 99 VASERYILDCNPALLLDGDVLPSQLRLAQITEMIHVASLLHDDVIDLATHRRGQVSGNIA 158
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GNQ +V GDF+L++A + ++ E L+ V L GE QL
Sbjct: 159 FGNQQAVFAGDFILARASTAMARLRNTRVTELLATVIADLIRGEFLQLRNVDEKGGDALQ 218
Query: 161 YLHVIKSKTAVLFSAALEVSSLI-----AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L +A+L S + S+ QA+ +G LGIAFQLVDD LD++
Sbjct: 219 ASFDYYLEKSYLKTASLISKSCMAAAVLGKAVPSIVQAIGEFGRCLGIAFQLVDDALDFK 278
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
++GK D + G T PV+ A+++ + +S + S +++A +R
Sbjct: 279 STDGDLGKPANADLKLGLATAPVLFAWKQFPEL-----ESAVRSNFQSKGAIEQARQYVR 333
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQRL 321
E + TE A + KAK L +PDS ++L+++ D + R
Sbjct: 334 EADGVRKTEAWAGQFIVKAKGLLSSHIPDSPPLQALLDICDRVITRK 380
>gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
Length = 309
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME ++ +++ + VE+ + +Y+I SGGKR+RP +TLA + L ++ + LA AI
Sbjct: 4 MESLDERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVSKGLGLDENDALDLASAI 63
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IHTA+L+HDDV+D + RR + WG + +VL GDFL +A ++ + K+ ++
Sbjct: 64 ELIHTASLVHDDVIDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIAKKKAA-MVD 122
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ + +GE+ Q ++ ++ + + Y +I KT LF AA + + +
Sbjct: 123 YVAKAVEDMVKGEILQEAVRGSVHLDLDTYYEIIDRKTGKLFGAAFALPAYYLEKPYWME 182
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
G +G AFQ+VDDVLDY GK+ +D NGK TLP+IL +R
Sbjct: 183 LDKA--GTLVGRAFQIVDDVLDYFPGT---GKDRFKDLLNGKATLPLILYTERYGSSFVE 237
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
S ENL F M ++ A Y A + LP
Sbjct: 238 KIL-----KNPSEENLLNLFERMMNAGVFEESLKIARGYVDGALKLIGDLP 283
>gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
25986]
gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
25986]
Length = 341
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/337 (20%), Positives = 133/337 (39%), Gaps = 18/337 (5%)
Query: 2 KMLEDLTLKDMEKVNFLIL-----KRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATAL 55
+ +++N + + +D+E + + + GKR RP++ + A
Sbjct: 7 SPFTSFLAQHFDQINDYLATFFDGQATSADIERYLYAPLSTFTANAGKRHRPLICMLAAT 66
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ++ A AIE + L+HDD+ D+ LRRGK L G ++ GD L+
Sbjct: 67 AVGGSFESARSAAAAIEHFQSGALIHDDIADNGQLRRGKPCMHLTEGTGLAINCGDLALT 126
Query: 116 QAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIK 166
+S L L + + Q + D
Sbjct: 127 MVTKTVLDDPTLESDVKLRVLHELTEMIVRTIEGQALDLGWVRDGRFDISVDDYLDMATH 186
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ L ++I G + +AL+++G++ G+AFQ+ DD+L+ G K+
Sbjct: 187 KTAFYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQIQDDLLNLVGTKEAANKDFR 246
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK TL + A +R + ++ ++ G L +A I +E ++
Sbjct: 247 TDITEGKRTLVAVHA--LSDERHHDEVEAILSSGTDDPAQLARAVEIFQETDSIDYAHTY 304
Query: 287 AYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
A KAK ++ + D ++ + + DF ++RLN
Sbjct: 305 ALDLTAKAKAAIENVELDPHARELFLSMADFFVERLN 341
>gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
Length = 325
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 12 MEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
E + +I + I S + + + Y++ GGKR+RP L M +
Sbjct: 4 FEDLREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPAL 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A AIE H TLLHDD++D S++RRGK WG+ T++L GD + A+ + +
Sbjct: 64 EVAMAIETYHNFTLLHDDLMDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVD 123
Query: 126 SQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S+ + +A + +G+ + + V E++YL +I+ KTAVL + AL++ ++
Sbjct: 124 SRLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAI 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
G L YG+++G++FQL DD+LD G+ +GK IG+D K T+ +I A
Sbjct: 184 AGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKKIGDDIACNKKTMLLIKAL 243
Query: 243 QRGT-KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +S + E ++ I E + A+ +L L
Sbjct: 244 EMAQGEELNLLRESLLMPDVQCEEKIRAVTGIYNRLGIRPIVEDLIDYHNGLAEKALDEL 303
Query: 302 P-DSSWKKSLMEVVDFCLQRLN 322
D K L E++ R +
Sbjct: 304 GLDEITTKPLRELIGTLRNRKS 325
>gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 383
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 137/321 (42%), Gaps = 19/321 (5%)
Query: 18 LILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + + + V +Y +GGK +RP L LA L R + +
Sbjct: 64 ELRRAVDTLPAPVRRVARYHFGWEDAAGLPSGANGGKAVRPALVLAAVHALGGRPERALR 123
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E H TLLHDDV+D RR + A V+G+ ++L GD L S A + E
Sbjct: 124 SAAAVELTHNFTLLHDDVIDRDRTRRHRPTAWTVFGDADAILAGDALQSLAQQWLAEDPH 183
Query: 127 QEALEALSLVACTLAEGELRQLSLS-----KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
A A++ +A + E Q + +V+ ++ L + +SKT L A + +
Sbjct: 184 PRAGAAVARLARCVIELCAGQHTDCALEDRAPTEVSLDECLTMAESKTGALLGCACALGA 243
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L A + AL ++G G+AFQL+DD++ G+ + GK G D K +LPV+ A
Sbjct: 244 LHADAEPDQVNALDAFGREAGLAFQLIDDIIGIWGDPSRTGKPAGADLTARKKSLPVVAA 303
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-C 300
GT + G + L + ++ + A +A L
Sbjct: 304 LTSGTAAGAELAERY--AGPPEPDELARTVALVEAAGGRDWAQAEAADRMGRAVQQLSLA 361
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+PD + L+ + +F +R
Sbjct: 362 VPDPARAGGLLSLAEFVTRRS 382
>gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 347
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 137/321 (42%), Gaps = 19/321 (5%)
Query: 18 LILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + + + V +Y +GGK +RP L LA L R + +
Sbjct: 28 ELRRAVDTLPAPVRRVARYHFGWEDAAGLPSGANGGKAVRPALVLAAVHALGGRPERALR 87
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E H TLLHDDV+D RR + A V+G+ ++L GD L S A + E
Sbjct: 88 SAAAVELTHNFTLLHDDVIDRDRTRRHRPTAWTVFGDADAILAGDALQSLAQQWLAEDPH 147
Query: 127 QEALEALSLVACTLAEGELRQLSLS-----KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
A A++ +A + E Q + +V+ ++ L + +SKT L A + +
Sbjct: 148 PRAGAAVARLARCVIELCAGQHTDCALEDRAPTEVSLDECLTMAESKTGALLGCACALGA 207
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L A + AL ++G G+AFQL+DD++ G+ + GK G D K +LPV+ A
Sbjct: 208 LHADAEPDQVNALDAFGREAGLAFQLIDDIIGIWGDPSRTGKPAGADLTARKKSLPVVAA 267
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-C 300
GT + G + L + ++ + A +A L
Sbjct: 268 LTSGTAAGAELAERY--AGPPEPDELARTVALVEAAGGRDWAQAEAADRMGRAVQQLSLA 325
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+PD + L+ + +F +R
Sbjct: 326 VPDPARAGGLLSLAEFVTRRS 346
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
D ++ +V + + +C D + + ++Y + GGKRLRP+L LA + + +
Sbjct: 21 DFNDWMRAELARVEEALSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVGGQP 80
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IH +L+HDD +D+ +RRGK + +G ++L GD L + AF
Sbjct: 81 EAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGDALQALAFE 140
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTAVL 172
++ L ++ + + ++E+ H+ KT L
Sbjct: 141 LLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSLKTGAL 200
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ + ++ + QAL YG +G+AFQ+VDDVLD + +GK G+D +
Sbjct: 201 LQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAASD 260
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
KPT ++ L A
Sbjct: 261 KPTYVSLM--------------------------------------GLQSARAYADVLHA 282
Query: 293 KAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L L D+ ++L + D ++R +
Sbjct: 283 QALAALVASGLTDT---RALAALADMVVRRSH 311
>gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
Length = 127
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 79/119 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L +
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF
Sbjct: 69 GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQ 127
>gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 329
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 11/330 (3%)
Query: 1 MKMLEDLTLKDME----KVNFLIL-KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
M + +D+E + + + + + D +++ GKRLRP++ L A
Sbjct: 1 MTTISTTIKQDLEIHRKAIIQFLETEALEGFPSNLADSTYHIMTLEGKRLRPIMVLMAAQ 60
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A AIE H TL+HDD++D + +RRG + +G +++ GD +L
Sbjct: 61 GFGVTTEAAMSAAIAIEVFHNFTLVHDDIMDKALVRRGTITVHEKYGVDKAIVTGDAMLP 120
Query: 116 QAF---CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E KS +++ +A + EG+ + VT E+Y+++I+ KT+VL
Sbjct: 121 HSMGLLIKGTEEKSAVLMKSFLKMAQEVMEGQQYDMEFETQEIVTVEEYMNMIRLKTSVL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F A E+ +++ ++ L +G+ G+AFQ++DD LD G+ GK IG D
Sbjct: 181 FGCACEIGAILGNASIEDQKKLYDFGLYTGLAFQIMDDYLDTFGDDT-FGKRIGGDILLN 239
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T +I A Q +K ++ + + +E +
Sbjct: 240 KKTFLLINAMQNANGDQKARIAKLFDEKD-EEAKISGFQDVFKEIGVAKIALDKMEELHD 298
Query: 293 KAKDSLRCLPDSSW-KKSLMEVVDFCLQRL 321
K+ +++ S K+ L+E+ + L R
Sbjct: 299 KSVEAVMSSGISEEDKRKLIELGEIMLSRT 328
>gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
Length = 312
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 109/321 (33%), Positives = 170/321 (52%), Gaps = 10/321 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M LE + + + + + SDV I + + L+ +GGKR+RP L + L
Sbjct: 1 MTDLEAP----LRRFEEALSELVQSDVLFIRLIHQDLVTAGGKRIRPRLVFLASRALGG- 55
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA A+E +H+ATLLHDD++DD+ RRGK AA +GN SVL GDFLLS+ +
Sbjct: 56 APFELELALAVELLHSATLLHDDLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSRLLHV 115
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +T E +E + VA TL+EGE+ Q ++ D + E+Y +I +KTAVL + A E
Sbjct: 116 IAKTGRMELVERFAEVAKTLSEGEVLQFQVAALEDYSLENYERIITAKTAVLMALATEGP 175
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+ G ++ VR+AL YG+ G AFQ+ DD LD G +GK +G D R GK TL +L
Sbjct: 176 ALLLGAESGVREALYRYGLLYGQAFQMRDDYLDLMGTPEVLGKPVGGDLREGKATLIPLL 235
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + +L++ + RE+ A + R + A +L
Sbjct: 236 LM-----ERYPEVREVLRRRAREAGDLERVRALARESGAAEEAVRRIRERAEAAAQALEA 290
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP S ++++L E+ +R+
Sbjct: 291 LPPSPFREALRELALKEAERV 311
>gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
Length = 320
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + ++ + + + + +++ Y + GGK LRP L A Y +A AI
Sbjct: 3 LAETRRVLAEAVAATDPRLQELLDYALE-GGKGLRPTLVFLCARFGIYDALEAGRVAAAI 61
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H A+L+HDD++D +A+RR + A +G +VL GD+L + AF ++ + K
Sbjct: 62 ELVHLASLVHDDILDGAAVRRNRPALYRAYGTVPAVLTGDYLFATAFGLLAKGKKAVLYT 121
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ + ++ K E Y I KTA L SAA +++ V+ + +
Sbjct: 122 VTEAIRSMCSG----EIGQLKGGLAGPEAYFTYIGQKTAALISAACRCGAILGRVKRNQQ 177
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L +G +LG+A+Q+VDD LD G MGK +D G TLPV+
Sbjct: 178 ECLAQFGWHLGLAYQIVDDCLDLFGSPERMGKPCRQDLARGLLTLPVLRFLAVTPDAACW 237
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ + +++ R T A +A +L LP + +
Sbjct: 238 RERLARG---LEAAEMEELVEAARGLGCDTYTAAVAADEVTRALTALDRLPVNPVQD 291
>gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C]
gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C]
Length = 336
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 8/287 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ V +Y + GK LRP L +AL + + A E HT +LLHDD++D A
Sbjct: 33 LDAVHRYALLPTGKLLRPRLLALSALAVGGSLRAVLPAAVGFEAAHTGSLLHDDIIDQDA 92
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG+ A +G Q +++ G+ L F + E + + A +Q+
Sbjct: 93 LRRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAAHGIPHQRIVAAMETQAKAGQQIC 152
Query: 150 L--------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ +L+ + YL + ++KTA LF AA V +++ G AL ++G +L
Sbjct: 153 RGAALELTLAGDLEAPPDVYLEMARAKTAALFDAACTVGAVLGGGTEHQIAALGAFGDHL 212
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQ+ DD+L Y G+ GK D RN +PTLPV+LA Q T ++ ++ + G
Sbjct: 213 GCAFQIRDDLLPYLGDGARAGKPADSDLRNRRPTLPVLLAHQGATPAQRAVLRNCMTPGG 272
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E ++ ++R AL E RA + ++A+ +L +P +
Sbjct: 273 DPWEAFRRLAGVLRATGALQAAEQRADDHAEQARHALGGIPPGEHRD 319
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx
var. piperascens]
Length = 377
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/323 (22%), Positives = 132/323 (40%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + I + ++Y + +GGKR+RPML +A ++ + ACA+
Sbjct: 95 KSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAV 154
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK + +G +VL GD LLS AF V
Sbjct: 155 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAP 214
Query: 130 LEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + V + L G++ + +V + + KTA L ++ +
Sbjct: 215 PERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLG 274
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 275 AILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKAGKDLVADKTTYPKLI 334
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + A ++A++ L
Sbjct: 335 --------------------------------------GVEKSMEFADRLNREAQEQLLH 356
Query: 301 LPDSSWKKS-LMEVVDFCLQRLN 322
+ + L+ + ++ R N
Sbjct: 357 F--HPHRAAPLIALANYIAYRDN 377
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 50/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + I + ++Y + +GGKR+RP+L +A ++ G
Sbjct: 70 DFKSYMLEKANLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAACELVGGDG 129
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ RRGK +V+G + +VL GD +LS AF
Sbjct: 130 LTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFE 189
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + + LA+ + S+ DV E + KTA
Sbjct: 190 HMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAA 249
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++ + +++ G + + L+ + ++G+ FQ+VDD+LD E+GK G+D +
Sbjct: 250 LLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVS 309
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L + + A
Sbjct: 310 DKTTYPKLL--------------------------------------GIEKSREFAEELN 331
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A++ L L+ + ++ R N
Sbjct: 332 KDAQEQLSEFDPRKA-APLIALANYIAYRQN 361
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 51/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++V + + + + D ++Y + +GGKRLRP+L LA ++ + + A A+
Sbjct: 32 DRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSSELAMPTAVAL 91
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD +LS+AF MV +
Sbjct: 92 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVP 151
Query: 130 LEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L V G S+ V E ++ KTA L A + +
Sbjct: 152 ADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGA 211
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LI G + QA+++Y +G+AFQ++DD+LD +GK G+D K T P +L
Sbjct: 212 LIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDLLADKTTYPKLL- 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + +A +++K +L
Sbjct: 271 -------------------------------------GLDASREKALQLVRESKAALEPW 293
Query: 302 PDSSWKKSLMEVVDFCLQR 320
D + L+ + D+ R
Sbjct: 294 RDKAA--PLLALADYVASR 310
>gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
Length = 232
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 131/232 (56%), Gaps = 1/232 (0%)
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
+RRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL
Sbjct: 1 MRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLM 60
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ D TE Y+ VI SKTA LF AA ++ +++ V A+++YG LG AFQL+D
Sbjct: 61 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 120
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
DV+DY + +EMGKN+G+D GKPTLP++ A Q G + + I + L +
Sbjct: 121 DVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNE 179
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
M + +L T +A KA L LP+S +K++L+ + + R
Sbjct: 180 ILAAMEQTGSLQYTIEKALHEADKAIAELAILPESEYKQALITLAHMAVNRS 231
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 51/319 (15%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V + + + E + + ++Y + +GGKRLRP+L +A + + A A+
Sbjct: 26 ASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACELAGGEPTQALPTAVAL 85
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL+++F MV A
Sbjct: 86 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSKGVA 145
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSS 181
E L V L+ + + E + + KT L SA + +
Sbjct: 146 PERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTGALLSACVICGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LI G ++ + AL+ Y +G+AFQ++DD+LD + +GK G+D K T P +L
Sbjct: 206 LIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLL- 264
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L ++ RA +AK +L
Sbjct: 265 -------------------------------------GLEESRRRAELLVSEAKAALDPW 287
Query: 302 PDSSWKKSLMEVVDFCLQR 320
S+ L+ + D+ R
Sbjct: 288 QSSAA--PLLALADYITSR 304
>gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 325
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 12 MEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
E + +I + I S + + + Y++ GGKR+RP L M +
Sbjct: 4 FEDLREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPAL 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A AIE H TLLHDD++D S++RRGK WG+ T++L GD + A+ + +
Sbjct: 64 EVAMAIETYHNFTLLHDDLMDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVD 123
Query: 126 SQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S+ + +A + +G+ + + V E++YL +I+ KTAVL + AL++ ++
Sbjct: 124 SRLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAI 183
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
G L YG+++G++FQL DD+LD G+ +GK IG+D K T+ +I A
Sbjct: 184 AGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKKIGDDIACNKKTMLLIKAL 243
Query: 243 QRGT-KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +S + E ++ I E + A+ +L L
Sbjct: 244 EIAQGEELNLLRESLLMPDVQCEEKIRAVTGIYNRLGIRPIVEDLIDYHNGLAEKALDEL 303
Query: 302 P-DSSWKKSLMEVVDFCLQRLN 322
D K L E++ R +
Sbjct: 304 GLDEITTKPLRELIGTLRNRKS 325
>gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei]
gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei]
Length = 396
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 39/332 (11%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-------- 65
V L + S+ + + Y GGK LRP ++L + +
Sbjct: 65 AVENLADLNVTSN---LGRMTHYYFQQGGKMLRPTVSLLMGNACNSATNRSISDDLLAVP 121
Query: 66 ------------------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
+ E IHTA+L+HDDV+D++ RRG + VWGN+ SV
Sbjct: 122 SSDRSGIATHLTVCQNQYKIGMIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSV 181
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
LVGDF+L++A ++ + ++ + L GE Q+S + + ++ I+
Sbjct: 182 LVGDFILARATQILCSIGKPNVISVMASIIEDLVLGEFMQMSATPSEATPQQRMNAYIEK 241
Query: 168 KTAVLFSA----ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S + L ++ Q YG NLGIAFQL DD+LD+ +EMGK
Sbjct: 242 THRKTASLFASSCRSTAILADPNNLNLHQTAYEYGRNLGIAFQLADDLLDFIATSDEMGK 301
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+ D + G T PV+ A Q+ + + ++G + +KA I+ + + T
Sbjct: 302 PVAADLKLGLATAPVLYASQQYPELITMLLRKFKHEG-----DAEKAREIVVNSDGMDKT 356
Query: 284 EYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVV 314
+Y QKA + LP+ + + L+++
Sbjct: 357 RQLIDAYSQKAIEMASSLPNRNESTEQLIKLA 388
>gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
Length = 340
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 16/337 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56
+ L+ ++ ++ + + +V+++ +F+GGKR+RP+LTL A +
Sbjct: 4 EKLKKQLQAAAGQIETVMAADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAARLTTAA 63
Query: 57 --LEYRGD--------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+ + LA A E++HTA+LLHDDV+D +A RRG+ W +
Sbjct: 64 NHGGVPTEPPAADQATDRQRLAIAFEYLHTASLLHDDVIDHAAQRRGRETVNSRWDQGHA 123
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+L GDFL ++A + Q LE ++ + E Q + D E Y V++
Sbjct: 124 ILAGDFLHARAMWLAGNYGGQPCLELIASATEAMVAAEFLQAEAAAARDWRRETYFAVLE 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L +AA + + G QAL+ YG NLG+AFQ++DD+LD+ G+ GK +G
Sbjct: 184 GKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDDLLDFLGDPRATGKAVG 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + GK TLP++LA QR T ++ + + + L ++ E A
Sbjct: 244 NDLQEGKMTLPLLLAHQRATPEQRCWLEQLLAAEPARRQAELDTVRQLLTETDAFAGCRS 303
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L P ++ L + ++ LQR +
Sbjct: 304 QARELIATGLAGLEIFPAGGERELLQGLGEYVLQRDH 340
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 138/336 (41%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + V+ + + + E+ + ++Y +F+GGKR+RP+L LA +
Sbjct: 2 DLKAYLKERCTLVDEALDRFLPKADELPFSLHKSMRYSVFAGGKRIRPILMLAACDAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IHT +L+HDD+ RRG V+G ++L GD LL++A
Sbjct: 62 DISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDALLTEA 121
Query: 118 FCMVIETKS-----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
F ++ + + + + G++ + ++ ++
Sbjct: 122 FILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQYIHT 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A+++ +++ G + +L +YG +G+AFQ+ DD+LD G E+GK+ G
Sbjct: 182 HKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEIGKDAG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK T P ++ L +++ R
Sbjct: 242 SDEARGKATYPAVM--------------------------------------GLAESKKR 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A +SL + L ++ + ++R +
Sbjct: 264 AVELVDMALESLAGFDHRA--DPLRDIATYIVKRKS 297
>gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 325
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 8/327 (2%)
Query: 1 MKML---EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ + E L K++ + + + D I D V L+ +GGK LRP +
Sbjct: 2 MQTIWQPESLVAKELAALKPYLATNVKIDNAAINDRVHDLLAAGGKFLRPGFFYLFSQFG 61
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ A A+E +H ATL+HDDV+D+S RR +G + ++ GD L +
Sbjct: 62 PDHNTARLRAGAAAMELLHVATLIHDDVIDESPERRHVTTIHQDYGQRNAIYAGDLLFTC 121
Query: 117 AFCMVIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
F V+ K+ + ++ + + +GEL Q++ + + T +DYL + + KTA LFS
Sbjct: 122 YFDQVLIAAKTADDVKINTAAMRAILQGELDQMAHNFDPTTTVDDYLAIARGKTARLFSL 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ E + AG SV + + G +G+A+Q++DDVLDY G+ K + D R+G +
Sbjct: 182 SCEQGAHFAGADASVVKLAQQIGERMGLAYQMLDDVLDYAGDEALTQKPVLNDLRDGVYS 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP T + + IS E L + + + A Y + A
Sbjct: 242 LP---LIYALTAEPQLAEQLPQPGDHISNEQLLTIRDQVIALGGVTQAQQLATHYTKTAL 298
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + LP +++L +V L R +
Sbjct: 299 NLIDQLPTGETQQTLRRLVTELLVRNH 325
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 128/333 (38%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + I I + ++Y + +GGKRLRP+L LAT+ M+
Sbjct: 17 NLVAYLKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTI 76
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ AF
Sbjct: 77 EIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFE 136
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
V + L L G++ L D + E + KT
Sbjct: 137 FVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A + ++AG + Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 197 AALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDL 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + + + +A
Sbjct: 257 LAKKVTYPSLW--------------------------------------GIEQSRVKAQQ 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L + L + F R +
Sbjct: 279 LIEAACTELEPF--GEDAQPLKAIAHFITSRNH 309
>gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius ATCC 11741]
gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius ATCC 11741]
gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius CECT 5713]
Length = 328
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-----LEYRGD 62
KD+EKV + +I D + + + +GGK LRP L +
Sbjct: 12 LAKDIEKVKHNLQDKISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDK 71
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++
Sbjct: 72 KLIDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLIT 131
Query: 123 ETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + S + GEL Q+ N T +YL + KTA LF A +
Sbjct: 132 DNVLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
G + G N+GI+FQ++DD+LD + + + K ED G +LP++L
Sbjct: 192 YFGGASSQTVSLATRIGQNIGISFQILDDILD-YSDASRLNKPTLEDLATGVYSLPLLLV 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +++ +++ ++ E + + A + KA + L
Sbjct: 251 ---LNEDSDELHTLLAKKQDLTLPEIQRIQALVVELGGVEKAKDLAAKFTNKALIDIDKL 307
Query: 302 PDS 304
PDS
Sbjct: 308 PDS 310
>gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 410
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 34/345 (9%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
+ ++++ V+ + + + + + +Y G GKRLRP L L + L
Sbjct: 70 SVVQQEVDVVSERLRHSVTTGIPALKTAAEYFFRRGIEGKRLRPTLALLMSSALSPAAPS 129
Query: 63 --------------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA E IH A+LLHDDV+DD+ RRG ++ G
Sbjct: 130 PEYLQVDTRPAAEHPHEMRRRQQRLAEIAELIHVASLLHDDVIDDAQTRRGVLSLNTSVG 189
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
N+T++L GDFLL++A + ++ E +E +S V L GE+ Q++ + + E YL
Sbjct: 190 NKTAILAGDFLLARASVTLASLRNSEIVELMSQVLEHLVSGEIMQMTATSEQLLDLEHYL 249
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
KTA L + + +++AG V SYG +LGIAFQ+VDD+LD G + +G
Sbjct: 250 AKTYCKTASLMANSSRSVAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLDLTGSSSVLG 309
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K D R+G T PV+ A +E+ ++ I ++ KA ++ + L
Sbjct: 310 KPALNDMRSGLATAPVLFA-----AQEEPALQALILRRFKHDGDVTKAMSLIERTQGLRR 364
Query: 283 TEYRAYSYGQKAKDSLRCLP--DSS----WKKSLMEVVDFCLQRL 321
E A + + A D +RCLP S +++L+++ L R
Sbjct: 365 AEELAAQHAKAAADMIRCLPTAQSDHAEIAREALIQITHRVLTRK 409
>gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
Length = 355
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/355 (20%), Positives = 134/355 (37%), Gaps = 38/355 (10%)
Query: 1 MKMLEDLTLKDMEKV--NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L D++++ + + D + D V+ GGKRLRP + + + +L
Sbjct: 2 INHLRQ-IAADIDRLLADDEFPATVRPDY--LRDAVRDYPVRGGKRLRPAMLIWSCGLLG 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-------------------------G 93
+ A A+E H TL+HDD++D RR
Sbjct: 59 GSESAALYPAAAVEVFHNWTLVHDDIIDQDDTRRGAPTSHVKLAAELGGRFSLAADDAER 118
Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153
+ + LL ++ + + AL L + +
Sbjct: 119 TGRDFAILAGDLQQGWANDLLLRSAEHGVPPEVTVALGRRFQKLANSDLISGEALDVEFS 178
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSS--------LIAGVQNSVRQALKSYGMNLGIAF 205
L +++ + A L+ + A ++ + L + + GIAF
Sbjct: 179 LRELTGLKSQEVRTMLGLKTGALLQFCTEAGAMIALNTADAEHPDVRKLSEFALAAGIAF 238
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD L G + +GK +G D R GK T+ ++ + + ++ I S
Sbjct: 239 QLRDDYLGIFGVYDSLGKALGNDLREGKATVMLLDTLRLASAADREKLLGYIGRETYSDA 298
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+L IMR++ A E A ++A++ LR PD+ +++ L+++V+F + R
Sbjct: 299 DLDDVRRIMRDSGAAASNEAEAARLAEQARNILRSFPDNPYRQHLLDLVNFLIDR 353
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M +D+ ++ +E +N + K + D E++ D ++Y +F+GGKRLRP+L +++ ++
Sbjct: 1 MFDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D+ + +ACAIEFIHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ F
Sbjct: 61 RDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGF 120
Query: 119 CMVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++I A C G LS+N ++TEE+ + KT
Sbjct: 121 EVLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ +++ G + + L Y +G+AFQ+ DD+LD G+ +++GKN+ D
Sbjct: 181 GALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDL 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
NGK T + L +
Sbjct: 241 ENGKSTFVSVF--------------------------------------GLQRSISLVKE 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L + L + + R +
Sbjct: 263 LTASAIRILDDF--GEKSEFLKSLTKYMADRDS 293
>gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius UCC118]
gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius UCC118]
Length = 328
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-----LEYRGD 62
KD+EKV + +I D + + + +GGK LRP L +
Sbjct: 12 LAKDIEKVKHNLQDKISVDYPDLQTALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDK 71
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++
Sbjct: 72 KLIDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLIT 131
Query: 123 ETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + S + GEL Q+ N T +YL + KTA LF A +
Sbjct: 132 DNVLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
G + G N+GI+FQ++DD+LD + + + K ED G +LP++L
Sbjct: 192 YFGGASSQTVSLATRIGQNIGISFQILDDILD-YSDASRLNKPTLEDLATGVYSLPLLLV 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +++ +++ ++ E + + A + KA + L
Sbjct: 251 ---LNEDSDELHTLLAKKQDLTLPEIQRIQALVVELGGVEKAKDLAAKFTNKALIDIDKL 307
Query: 302 PDS 304
PDS
Sbjct: 308 PDS 310
>gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
synthase) [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
synthase) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 305
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 56/327 (17%)
Query: 13 EKVNFLILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++VN +++ + S + ++ +++ GGKRLRP L A M +N A
Sbjct: 18 QRVNNVLISTLSSVAFANNPLVH-AMQHGTLLGGKRLRPFLVYAVGEMFGLSANNLDAPA 76
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ + +
Sbjct: 77 AAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDALQALAFEILSKREM 136
Query: 127 QEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ A L + G+ L+ A++ A
Sbjct: 137 PDVTTADRLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHMLEQIHRHKTGALIRCAV 196
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + L Y +G+AFQ+ DD+LD G+ +GK G D + GK T
Sbjct: 197 RMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILDVIGDTEMIGKRQGSDQQLGKSTY 256
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P +L L + +AY Q+A
Sbjct: 257 PALL--------------------------------------GLEQAQKKAYELYQEALK 278
Query: 297 SLRCLPDSSW-KKSLMEVVDFCLQRLN 322
+L L D S+ L + F ++R N
Sbjct: 279 ALNKLEDKSYNTTMLRALASFIIERNN 305
>gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
43183]
gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
43183]
Length = 324
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + D V Y++ GGKR+RP+L L + + A
Sbjct: 8 LDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + + ++
Sbjct: 68 IEVYHNYTLLHDDLMDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPAEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L + T + EG+ + + DV EE+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 128 AVMDLFSLTALEICEGQQMDMDFEQRSDVKEEEYLEMIRLKTSVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +GMN+G+AFQL DD+LD G+ GKNIG D K T +I A + K
Sbjct: 188 AEDAERLYDFGMNMGVAFQLKDDLLDVYGDTAVFGKNIGGDILCNKKTYMLIKALEHADK 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ K I E ++ + + E + Y KA +SL + ++
Sbjct: 248 EQATQLKHWITVTDFDPAEKIEAVTGLYNRIGVKLLCENKMSEYNNKALESLAAVNVTAE 307
Query: 307 KK-SLMEVVDFCLQR 320
+K L +++ + R
Sbjct: 308 RKRELDKLIKELMYR 322
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 54/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + + V+ + + + + I +++ +F+GGKRLRP+L LA A
Sbjct: 4 DLKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGG 63
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+N + ACA+E +HT +L+H +DD +RRG V+G ++L GD L + +
Sbjct: 64 SLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQALS 123
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQ-------LSLSKNLDVTEEDYLHVIKSKTA 170
F +V +T ++V + + ED ++ +SKTA
Sbjct: 124 FELVAQTPVTHRHSPAAMVLELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHESKTA 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++++++ + A Q QAL +GM G+AFQ++DD+LD ++GK+ G+D
Sbjct: 184 ALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEKLGKSAGKDVA 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T P ++ L + A+
Sbjct: 244 SEKSTYPALM--------------------------------------GLDASRDEAHRL 265
Query: 291 GQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
KA+ +L P+ W L ++ D+ L+R
Sbjct: 266 TGKARQALEVFGPNGHW---LHQLADYLLKR 293
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 52/322 (16%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + K I I + ++Y + +GGKR+RP+L +A ++ R + + ACA+E
Sbjct: 105 AVTEALDKAIPHSYPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAME 164
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G T++L GD L + AF ++ S+
Sbjct: 165 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVG 224
Query: 131 EA----------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + G++ ++ ++ V + + KTAVLF A
Sbjct: 225 SDGILRAVTELARATGPQGIMGGQIVDIASERDAFVDLQTLEWIHIHKTAVLFECATVCG 284
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++ + LG+ FQ+VDD+LD ++GK G+D + K T P ++
Sbjct: 285 AIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSEDLGKTAGKDLVSDKATYPKLM 344
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + + KAK+ L C
Sbjct: 345 --------------------------------------GLEKAKGFSLELLNKAKEELSC 366
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + D+ R N
Sbjct: 367 FDPMKA-APLFGLADYMALRQN 387
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 296
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 128/325 (39%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ + ++ S + D ++Y + GGKR+RP L A ML + + A
Sbjct: 12 QRIDDCLSAQLESLPAMAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAA 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +LLHDD+ +D+ LRRG+ + T++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLP 131
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L A + + + G+ L E A++ A
Sbjct: 132 DRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVA 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A V ++ AL++Y +G+AFQ+ DD+LD G+ +GK G D K T P
Sbjct: 192 LGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGDTVTLGKPQGSDLAQEKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A KA +
Sbjct: 252 ----------------------------------ALL----GLDNARELARELHGKALTA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ LP + L D+ ++R +
Sbjct: 274 LQSLPYN--TDILEAFADYIIERTH 296
>gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 360
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/342 (20%), Positives = 129/342 (37%), Gaps = 34/342 (9%)
Query: 13 EKVNFLILKRICSD----------VEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRG 61
++V+ + + + + + D V+ + GGKRLRP
Sbjct: 17 QRVDKALADFLAARRTWMTDVDGSLAPVADAVEAFVLGGGKRLRPAFAYWGYRGAGGIDT 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------------- 105
+ A+EF+ + L+HDD++D S RRG+ A L + Q
Sbjct: 77 EQVATALAALEFVQASALIHDDLMDRSDTRRGEPAVHLRFAAQHRSAGWDGDADGFGDAA 136
Query: 106 SVLVGDFLLSQAFCM------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
++L+GD L + + T ++ + + L L+ + E
Sbjct: 137 AILLGDLCLVWSDELLHSAGLDPRTVARARPIFDQMRSEVTVGQYLDVLTQATGDTSVEW 196
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
L + + +A + A +YG+ LG AFQL DDVL G+
Sbjct: 197 AGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGLPLGEAFQLRDDVLGVFGDPA 256
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ GK G+D R GK T V A + ++ +++ D + + + ++ + A
Sbjct: 257 QTGKPAGDDLREGKRTYLVAAALETVDSTGRDMLLNSLGDPGLDDVGVARLRELIEASGA 316
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
L E R + A +L + D+ ++L ++ +R
Sbjct: 317 LDRAEQRIRALTDTALAALSTVDLDTEAHQALADLAIAATRR 358
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 128/325 (39%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ + ++ S + D ++Y + GGKR+RP L A ML + + A
Sbjct: 12 QRIDDCLSAQLESLPAMAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAA 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +LLHDD+ +D+ LRRG+ + T++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPMP 131
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++L A + + + G+ L E A++ A
Sbjct: 132 DSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIECAVA 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A V + AL++Y +G+AFQ+ DD+LD G+ +GK G D K T P
Sbjct: 192 LGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKRQGSDLAQEKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A KA +
Sbjct: 252 ----------------------------------ALL----GLDNARELARELHGKALTA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ LP + L D+ ++R +
Sbjct: 274 LQSLPYN--TDILEAFADYIIERTH 296
>gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
Length = 299
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 131/334 (39%), Gaps = 56/334 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++ +V + +R + E + ++Y + +GGKRLRP L L+ A +
Sbjct: 4 KERLAAQAAEVEVYLKERFGARMRERGVPESLLAAMEYSLLAGGKRLRPALCLSFAELFG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A E IHT +L+H +DD LRRG+ + V+G ++L GD LL++
Sbjct: 64 AARARAMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAAAILAGDGLLTE 123
Query: 117 AFCMVIETK---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF + A A + A + G+ + + VT + +
Sbjct: 124 AFGCMGRAWPGIAADLVLPALAEAARAAGAAGMGGGQALDMDYTARQGVTLAELARMQAL 183
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +A+ +++AG + YG +G AFQ+VDD+LD G+ +GK +G
Sbjct: 184 KTGALITASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAATLGKPVGS 243
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L ++ A
Sbjct: 244 DREQGKNTYPSMV--------------------------------------GLDESRRLA 265
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +L + + L ++ + ++R+
Sbjct: 266 DERVAAAVAALSPY-NGPAAEFLRDLARYIVERV 298
>gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021]
gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 355
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 27/332 (8%)
Query: 1 MKMLEDLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLE 58
+ + + +++ V + + +V + + + +GGKRLRP
Sbjct: 8 LDTIRFEVDRSLKEFVERQLPQVSAPEVAPLISAAEEFL-AGGKRLRPAFCYWGWRGAGG 66
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS------------ 106
A ++E + + L+HDDV+D S LRRG AA +
Sbjct: 67 GDDPALFTAAASLELLQASALVHDDVMDASDLRRGMPAAHRRFQTLHEKAGWHGSAEQFG 126
Query: 107 ----VLVGDFLLSQAFCMVIETK--------SQEALEALSLVACTLAEGELRQLSLSKNL 154
+L+G+ +L + M + +Q+ + + +L + + +N
Sbjct: 127 EGAAILLGNLMLIWSGEMWRGSGLPPASLAAAQQVHDHMRTELMCGQYLDLLEQAHGENT 186
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ K +V L + G + + + YG ++GIAFQL DD+L
Sbjct: 187 FDSALRVALFKSGKYSVEQPLRLGLVLAARGRAPWIDRLCEEYGRSVGIAFQLRDDILGV 246
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ E GK G+D R GK T+ + + + + T+ D + + + I+
Sbjct: 247 FGDPAETGKPAGDDLREGKRTMLIARTLSVASPAQAEAVRGTLGDPALDAAGIDRLRQII 306
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
E ALV E +Y + A SL P +
Sbjct: 307 AETGALVACEEMIKNYLEDALTSLDDAPITEE 338
>gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 338
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 86/335 (25%), Positives = 141/335 (42%), Gaps = 25/335 (7%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPD--VV-KYLI-----------FSGGKRLRPMLTLATA 54
+ + + E + + +Y + F+ GK LRP L L +
Sbjct: 4 ADERTAIEAAMRAAFPQADERVARFYAMQEYHLGWRDEDLQPASFAPGKLLRPRLCLLSC 63
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ + + LA AI+ +H +L+HDD+ D S RRG+ +WG + GD +
Sbjct: 64 RVVGGDPRDALPLAAAIQLLHDFSLIHDDIQDQSDTRRGRPTVWKLWGLAQGINTGDGMF 123
Query: 115 SQAFCMVIETKSQEALE--------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+ A + T+ EG+ LS NL + E YL +I+
Sbjct: 124 TIAHLALHRLSLTGVPPATVLDVLRRFDETILTICEGQFLDLSYEGNLQIDESAYLAMIE 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L +A+ E+ +L+ G QAL +G LG+AFQ+ DDVL G+ GK
Sbjct: 184 RKTAALIAASAELGALVGGADEETIQALFDFGRALGLAFQIEDDVLGIWGDPAVTGKPFA 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K +LPVI A R F KS + +++++ I+ + V E
Sbjct: 244 ADLHRRKISLPVIHALTTSPDR--AFLKSLYAQAALDNDSVRQVLAILDAAGSRVYAETT 301
Query: 287 AYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A +Y +A +L + D++ + L + L R
Sbjct: 302 AAAYHGEAFAALDRVQGDATALEELRAIATSLLGR 336
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + + + I + ++Y + +GGKR+RPML +A ++ + ACA+
Sbjct: 13 KSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAV 72
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK + +G +VL GD LLS AF V
Sbjct: 73 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAP 132
Query: 130 LEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + V + L G++ + +V + + KTA L ++ +
Sbjct: 133 PERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 193 AILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLI 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ A ++A++ L
Sbjct: 253 --------------------------------------GVEKSKEFADRLNREAQEQLLH 274
Query: 301 LPDSSWKKS-LMEVVDFCLQRLN 322
+ + L+ + ++ R N
Sbjct: 275 F--HPHRAAPLIALANYIAYRDN 295
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
Length = 294
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ V + + + + + + ++Y + GGKRLRP+LTLA +
Sbjct: 2 ELKPYLADRKYLVESALDRLLPAADREPRALTGAMRYSLLIGGKRLRPILTLACCEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E +HT +L+HDD+ +D+ LRRG +G T++L GD LL+ A
Sbjct: 62 ALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDALLTHA 121
Query: 118 FCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
F + + + EA G + + ++ KT
Sbjct: 122 FELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNIHIHKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + + G + LK YG LG+AFQ+ DD+LD G+ +GK G D
Sbjct: 182 GALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGKATGVDR 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ L A +
Sbjct: 242 ALDKATYPKLM--------------------------------------GLAQAREAAEN 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A L L + + + R +
Sbjct: 264 LMQEATRCLTEF--GPQADPLRALAQYVIARTH 294
>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
Length = 305
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 127/336 (37%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
E ++VN +++ + S + +++ GGKRLRP L A M
Sbjct: 8 QFEQQLKTYQQRVNKVLISTLSSLTFPNSPLVRAMQHGALLGGKRLRPFLVYAVGEMFGL 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+N A A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + A
Sbjct: 68 SANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDALQALA 127
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + + + A L + G+ L +
Sbjct: 128 FEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQIHRHK 187
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ A + + V L Y +G+AFQ+ DD+LD G +GK G
Sbjct: 188 TGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIGSTEMIGKRQGS 247
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 248 DQQLGKSTYP----------------------------------ALL----GLEQAQQKA 269
Query: 288 YSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQRLN 322
+ Q+A +L L + S+ +L + F ++R +
Sbjct: 270 HELYQEALKALNKLEEKSYNTTTLRTLASFIIERNS 305
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 49/318 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KV + + + + + ++Y + +GGKRLRP+L LA + + A A+E
Sbjct: 29 KVEAALDGSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELAGGDSAQAMPTAVALE 88
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ +D+ LRRG V+G ++L GD LL++AF MV
Sbjct: 89 MIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAFEMVALRSPGVPA 148
Query: 131 EALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L V G + +V E ++ KT L A + +L
Sbjct: 149 EQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLEYIHLHKTGALLRACVLTGAL 208
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IAG +++ +AL++Y +G+AFQ++DD+LD +GK G+D K T P +L
Sbjct: 209 IAGAPDALLEALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLL-- 266
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L ++ RA + +AK +L
Sbjct: 267 ------------------------------------GLEESRKRADALVAEAKAALEPWS 290
Query: 303 DSSWKKSLMEVVDFCLQR 320
L+ + D+ R
Sbjct: 291 AGGKAAPLLALADYITSR 308
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 78/326 (23%), Positives = 130/326 (39%), Gaps = 55/326 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + I + + Y + +GGKR+RP+L +A ++ + CA+
Sbjct: 85 ELVNKALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELVGGEESTAMPARCAV 144
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +VL GD LLS +F + S +
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLASATSSDV 204
Query: 130 LEALSLVACTLA-------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +V + DV E + KTA L A+
Sbjct: 205 VSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEAS 264
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T
Sbjct: 265 AVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTY 324
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P I+ L + A ++A+D
Sbjct: 325 PKIM--------------------------------------GLEKSREFAEKLNREARD 346
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L DS L+ + ++ R N
Sbjct: 347 QLLGF-DSDKVAPLLALANYIAYRQN 371
>gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
synthetase/ farnesyltranstransferase [Mycobacterium
bovis AF2122/97]
gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
synthetase/ farnesyltranstransferase [Mycobacterium
tuberculosis H37Rv]
gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
IdsA1 [Mycobacterium tuberculosis H37Ra]
gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
F11]
gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis H37Ra]
gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis 94_M4241A]
gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T92]
gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T85]
gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis GM 1503]
gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T17]
gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 1435]
gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis C]
gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
str. Haarlem]
gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 605]
gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T17]
gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T92]
gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis GM
1503]
gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis 210]
gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 4207]
gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN R506]
gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
ferase [Mycobacterium tuberculosis 94_M4241A]
gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu001]
gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu002]
gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu003]
gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu004]
gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu005]
gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu006]
gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu008]
gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu007]
gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu009]
gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu010]
gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu011]
gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu012]
gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN V2475]
gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
Short=GGPP synthase; Short=GGPPSase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
Short=GGPP synthase; Short=GGPPSase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
(PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
(FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
SYNTHASE) [Mycobacterium bovis AF2122/97]
gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
(PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
(FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
SYNTHASE) [Mycobacterium tuberculosis H37Rv]
gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase
idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis C]
gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
str. Haarlem]
gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
IdsA1 [Mycobacterium tuberculosis H37Ra]
gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
F11]
gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 1435]
gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 605]
gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T17]
gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T92]
gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis GM
1503]
gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
ferase [Mycobacterium tuberculosis 94_M4241A]
gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu001]
gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu002]
gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu003]
gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu004]
gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu005]
gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu006]
gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu007]
gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu008]
gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu009]
gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu010]
gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu011]
gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu012]
gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id
[Mycobacterium tuberculosis CDC1551A]
gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis W-148]
gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 4207]
Length = 359
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +RP L A + + A ++E +H +L+HDD++D RR + +W
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALW 131
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTE 158
G+ ++L GD +LS A ++++ S A+S L G+ + DV
Sbjct: 132 GDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVAL 191
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++ L + + KTA L +A+ EV +L+AG SVR+AL +YG ++G+AFQLVDD+L G
Sbjct: 192 DECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRP 251
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVENLKKAFIIMR 275
GK + D R+ K TLPV G + +++ S + L ++
Sbjct: 252 EITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIE 311
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRL 321
A + + D + +PD + L ++ + + R
Sbjct: 312 CGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAE-LQDLAHYIVDRQ 358
>gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
rimae ATCC 49626]
gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
rimae ATCC 49626]
Length = 365
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 23/317 (7%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ ++ +GGKR+RP L L + + + +ACAIE +A L+HDD+ D
Sbjct: 47 NTYLYQPLRGFSATGGKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDIAD 106
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRG+ G ++ VGD L + + + L L+ ++ E
Sbjct: 107 KSELRRGEPCLYRRLGTGLAINVGDAALVHTIGRICHGNTYDEATRLRLIDALISMQEHT 166
Query: 147 --------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSY 197
+ D+T ++YL + SKTA +A +++ G R ALK++
Sbjct: 167 LEGQALDLGWTQENRWDITPDEYLFMATSKTAYYSAAYPLLCGAIVGGGTAEQRSALKAF 226
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP-------------VILAFQR 244
G+ G+AFQL DD+L+ G+ GK+ D GK TL
Sbjct: 227 GLKAGLAFQLQDDLLNLVGDAKTQGKDFRSDITEGKRTLLVVKAIEVLLANAKDNTPDAA 286
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-D 303
K S ++ L++A ++ A+ D A + +AK L P D
Sbjct: 287 AAKASYKKLISLLSSKTNDPILLEEAVELIVSTGAVDDVRAYAQTLIAEAKGYLEEAPFD 346
Query: 304 SSWKKSLMEVVDFCLQR 320
+ + +L+ + DF + R
Sbjct: 347 AEARDTLLSMADFFVNR 363
>gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis 02_1987]
gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length = 359
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +RP L A + + A ++E +H +L+HDD++D RR + +W
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALW 131
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTE 158
G+ ++L GD +LS A ++++ S A+S L G+ + DV
Sbjct: 132 GDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVAL 191
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++ L + + KTA L +A+ EV +L+AG SVR+AL +YG ++G+AFQLVDD+L G
Sbjct: 192 DECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRP 251
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVENLKKAFIIMR 275
GK + D R+ K TLPV G + +++ S + L ++
Sbjct: 252 EITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIE 311
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRL 321
A + + D + +PD + L ++ + + R
Sbjct: 312 CGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAE-LQDLAHYIVDRQ 358
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 131/335 (39%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ +V I + I + ++Y + +GGKRLRP+L LAT ML
Sbjct: 13 DLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCEMLGASA 72
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E +HT +L+H +DD RRGK+ V+G +VL GD LL+ AF
Sbjct: 73 NIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDALLTYAFE 132
Query: 120 MVIETKSQEALEALSLVACTLAEG------------ELRQLSLSKNLDVTEEDYLHVIKS 167
+ Q + A + S+ V EE +
Sbjct: 133 HIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETLTFIHMH 192
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L ++ +++AG +V L+ Y +G+AFQ+VDDVLD +GK+IG+
Sbjct: 193 KTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITSTPETLGKSIGK 252
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P + L +++ +A
Sbjct: 253 DIAAQKATYPSLW--------------------------------------GLEESQRKA 274
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L + + + L+ + F R +
Sbjct: 275 EQLVADAISELSEFGEGA--QPLVAIAQFITARTH 307
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 76/333 (22%), Positives = 129/333 (38%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L K + + + I I + ++Y + +GGKRLRP+L LA M+
Sbjct: 17 NLAAYLQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGGTI 76
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD+ +D+ RRG++ V+G+ ++L GD LL+ AF
Sbjct: 77 SMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAFE 136
Query: 120 MVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKT 169
V + L ++ L D++ E + KT
Sbjct: 137 FVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNHKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A++ ++AG + Q L Y N+G+AFQ++DD+LD ++GK G+D
Sbjct: 197 AALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGKDL 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + + ++ +A
Sbjct: 257 IAKKVTYPSLW--------------------------------------GIEESRSKAQQ 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L + L + + R +
Sbjct: 279 LVEAACKELETF--GQLAQPLNALAHYITSRNH 309
>gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination
protein C3) [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 326
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 13/329 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALML 57
ML + D ++++ IL + D ++ I + L+ SGGKRLRPM+ + +
Sbjct: 2 MLNEALHIDPKRIDREILSLVKHDPDIPSDSVIGKSIAELVESGGKRLRPMMVIVGSRFG 61
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA EFIH A+L+HDD++D S RR + A G QT+V ++++++
Sbjct: 62 PRPSPRKTLQLAAIAEFIHAASLIHDDIIDRSDTRRNRPALHTKVGIQTAVHTANYMMAR 121
Query: 117 AFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + + ++ L GE +QL+ + DVTEE YL +KTA L
Sbjct: 122 VVELLSQYSKEHDRYVQDFSAITTTQLCIGEYQQLNHRFDFDVTEEVYLEKTGNKTAQLM 181
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ L+V + + ++V L +G L ++FQ+ DD+LD+ ++GK G D NG+
Sbjct: 182 ATCLKVGAKSSDASDAVADKLYQFGECLVMSFQIRDDLLDFTQPSEQLGKPAGSDLINGQ 241
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TLPV+ A K + + G+ E +++ R +R L E + Y +
Sbjct: 242 VTLPVLYALDLPELGPKIRSLTFRSTGEEIAEIVEEI----RSSRVLDKVEALSDHYLDR 297
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK + L + L ++ F R N
Sbjct: 298 AKTLIGDLHAYPAYRDLEHILHFFADRKN 326
>gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 394
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 83/327 (25%), Positives = 140/327 (42%), Gaps = 19/327 (5%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATALMLEYRG 61
V+ + + + S + + + +G GK +RP L LA L
Sbjct: 70 ASVDPELRRAVDSLPGSMRRIALHHFGWEHADGTPAAGNAGKAIRPALVLAAVRALGGPQ 129
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A A+E IH TLLHDDV+D RR + A V+G+ ++L GD L + A ++
Sbjct: 130 SSAVRAAAAVELIHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADAILAGDALQALAHRLL 189
Query: 122 IETKSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
E + A + +A + E Q +VT ++ L + ++KT L A
Sbjct: 190 AEDPHPASAAAAARLAACVIELCAGQHADTAMERRGPGEVTLDECLAMAEAKTGALLGCA 249
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +L AG + +AL ++G G+AFQL+DDV+ G+ + GK G D K +L
Sbjct: 250 CALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVIGIWGDPSRTGKPAGADLMARKKSL 309
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A GT + + L++ + + + +A +A
Sbjct: 310 PVVAALAAGTPAAAELAELYAVPHQ--EGELERTVLAVERAGGRDWAQQQAADRMARAMH 367
Query: 297 SLR-CLPDSSWKKSLMEVVDFCLQRLN 322
L +PD L+ + +F +R N
Sbjct: 368 ELSRAIPDPEAAGGLLALAEFVTRRSN 394
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 74/338 (21%), Positives = 131/338 (38%), Gaps = 57/338 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILK------RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
K + +D+++V I + + + + ++Y + GGKR+RP L AT
Sbjct: 9 KKIMYQFSQDLQQVQERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGR 68
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
ML A +E IH +L+HDD+ LRRG+ + + T++L GD L
Sbjct: 69 MLGADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDAL 128
Query: 114 LSQAFCMVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ AF ++ + + A + S L +S K + + E + +H
Sbjct: 129 QAFAFEILTQAPALSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHR 188
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
K+ + + L ++ Q L+ Y +G+AFQ+ DD+LD GE +GK
Sbjct: 189 NKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKT 248
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G D K T P +L L +
Sbjct: 249 VGSDLMADKSTYPKLL--------------------------------------GLDGAK 270
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++A +L LP ++L + +F + R +
Sbjct: 271 QKAQELYREAISTLDELP--FDTQALRAITEFVVNRKS 306
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ K + VN + + I + + + ++Y + +GGKRLRP+L+LA ML
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGG 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IHT +L+HDD+ +D+ RRG+ V+G ++L GD LL+ A
Sbjct: 65 SVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLA 124
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSL---------SKNLDVTEEDYLHVIKSK 168
F +++E + A + + S+ V E + + K
Sbjct: 125 FEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLK 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A + ++++ G Q L + NLG+AFQ+ DD+LD G ++GK +G D
Sbjct: 185 TGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + L ++
Sbjct: 245 ADNNKSTYVTVY--------------------------------------GLEKSKEILS 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA D+L L + + L+R N
Sbjct: 267 DVTKKAVDALEKF--GEKADFLRSLAKYLLEREN 298
>gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 324
Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + D +KY++ GGKR+RP+L L + + + A A
Sbjct: 8 LDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK VW + T++L GD +L A+ + + S+
Sbjct: 68 IEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ ++ DV EE+YL +I+ KTAVL +A+L++ +++ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-T 246
+ L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R
Sbjct: 188 PEDAENLYDFGMQIGVAFQLQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADR 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E + + + E + Y +A SL +
Sbjct: 248 DQLEGLNHWLSATSFCPEEKISAVTELYTQIGIKAVCENKMREYYTRAMTSLGAVSVIED 307
Query: 307 KKS-LMEVVDFCLQR 320
KKS L +++ + R
Sbjct: 308 KKSELKKLMKHLMYR 322
>gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
Length = 326
Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 7/324 (2%)
Query: 4 LEDLTLKDMEKVNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + + +N I + + + + ++Y++ GGKR+RP+L+L + + +
Sbjct: 1 MNQSIKEYIVSINSAIEQEDFGDKPQELYEPIRYIMSLGGKRMRPLLSLLSYQLYKDNIK 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + A+E H TL+HDD++D++ LRRG+ W + ++L GD +L +A+ +I
Sbjct: 61 EVIPASIAVEIFHNFTLMHDDIMDNAPLRRGQQTVHEKWNSPVAILSGDVMLVKAYQQLI 120
Query: 123 ETKSQEALE----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
E L + A + EG+ ++ + V E DY+ +I+ KTAVL +LE
Sbjct: 121 ANSPTEKLTEILEKFNRCAIEVCEGQQIDMNFEEQEQVQEADYIEMIRLKTAVLLGFSLE 180
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++A + + L G+N GI FQL+DD+LD + ++ GK +G D K T +
Sbjct: 181 FGGILAMDNEADQALLYQMGVNAGIGFQLMDDLLDVYADQDKFGKQVGGDIIANKKTYLL 240
Query: 239 ILAFQRGTKREKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
I A + + E + I E TE + Y +KA +
Sbjct: 241 IKANELAQGENSIKLHDWLKAQDFDNEEKVNAVKSIYDELHIKTLTEAKMNEYFEKAFTN 300
Query: 298 LRCLP-DSSWKKSLMEVVDFCLQR 320
L L S K + + ++ + R
Sbjct: 301 LEDLDAPSEKKNIIKDFFNYLINR 324
>gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 342
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 26/339 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI----------FSG-GKRLRPML 49
++ T + M V + R V + D++ Y + + GK LR +
Sbjct: 9 LEEYSAYTDRQMRAV---LNNR--KRVGRLYDMMMYHLGWLDEDFRECRAPRGKSLRSTM 63
Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
L + + + A A+E +H +L+HDD+ D RR + +WG ++
Sbjct: 64 CLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIEDGDVKRRHRDTLWKLWGVPQAINT 123
Query: 110 GDFLLSQAFC-------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
GD + A V + + + L EG+ + DV+ +Y+
Sbjct: 124 GDAMDIAANLSLLDLDGTVEPGMMVDIIRIFNQTVIELCEGQYLDMDFQGRSDVSVGEYI 183
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
++ KTA L A+ + +++A V ++G +GIAFQ+ DD+L G+ G
Sbjct: 184 TMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQIRDDILGIWGDPESTG 243
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K+ D RN K +LPV+ A ++ R + K+ +++ ++ + F I+ E AL
Sbjct: 244 KSAKNDIRNKKKSLPVLYAMEKS--RHRAELKTIYAKEQLTDGDIARVFEILTEAGALEY 301
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
T+ A Y +A L L + F ++R
Sbjct: 302 TQSEAQRYKDEAMAQFDGLKLHKGPMDKLRTIGRFLVER 340
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
Length = 298
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ K + VN + + I + + + ++Y + +GGKRLRP+L+LA ML
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVKNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGG 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IHT +L+HDD+ +D+ RRG+ V+G ++L GD LL+ A
Sbjct: 65 SVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLA 124
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSL---------SKNLDVTEEDYLHVIKSK 168
F +++E + A + + S+ V E + + K
Sbjct: 125 FEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLK 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A + ++++ G Q L + NLG+AFQ+ DD+LD G ++GK +G D
Sbjct: 185 TGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + L ++
Sbjct: 245 ADNNKSTYVTVY--------------------------------------GLEKSKEILS 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA D+L L + + L+R N
Sbjct: 267 DVTKKAVDALEKF--GEKADFLRSLAKYLLEREN 298
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ K + VN + + I + + + ++Y + +GGKRLRP+L+LA ML
Sbjct: 2 EFKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IHT +L+HDD+ +D+ RRG+ V+G ++L GD LL+ A
Sbjct: 62 SVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSL---------SKNLDVTEEDYLHVIKSK 168
F +++E + A + + S+ V E + + K
Sbjct: 122 FEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A + ++++ G Q L + NLG+AFQ+ DD+LD G ++GK +G D
Sbjct: 182 TGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + L ++
Sbjct: 242 ADNNKSTYVTVY--------------------------------------GLEKSKEILS 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA D+L L + + L+R N
Sbjct: 264 DVTKKAVDALEKF--GEKADFLRSLAKYLLEREN 295
>gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 324
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + D +KY++ GGKR+RP+L L + + + A A
Sbjct: 8 LDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK VW + T++L GD +L A+ + + S+
Sbjct: 68 IEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ ++ DV EE+YL +I+ KTAVL +A+L++ +++ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-T 246
+ L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R
Sbjct: 188 PEDAENLYDFGMQIGVAFQLQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADR 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E + + + E + Y +A SL +
Sbjct: 248 DQLERLNHWLSATSFCPEEKISAVTELYTQIGIKAVCENKMREYYTRAMTSLGAVSVIED 307
Query: 307 KKS-LMEVVDFCLQR 320
KKS L +++ + R
Sbjct: 308 KKSELKKLMKHLMYR 322
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E +N + + I + I ++Y I +GGKR+RP+L LA ++ + ACA+
Sbjct: 90 ETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAV 149
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LL+ AF + E
Sbjct: 150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSK 209
Query: 130 LEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + DV ED ++ KT L A+ +
Sbjct: 210 KMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEYIHVHKTGALLEASAVIG 269
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 270 AVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSEELGKTAGKDQVAGKLTYPKVM 329
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ ++AK+ ++
Sbjct: 330 --------------------------------------GLEKSKEFVKKLKREAKEHIQG 351
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS K L+ + +F R N
Sbjct: 352 F-DSDKVKPLIALTNFIANRNN 372
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/332 (25%), Positives = 134/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + VN + K + I + ++Y + +GGKR+RP L +A ++
Sbjct: 40 DLDSYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNE 99
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + ACA+E +HT +L+H +DD LRRGK +G T+VL GD LL+ AF
Sbjct: 100 DLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAFE 159
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + V L + ++ ++ + V E +V KTA
Sbjct: 160 HIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYVHTHKTA 219
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
VL +A+ +++ G L +Y N+G+ FQ+VDD+LD E+GK G+D
Sbjct: 220 VLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLV 279
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 280 ADKATYPKLL--------------------------------------GLEKSRAFAEEL 301
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KAKD L L+ + D+ R N
Sbjct: 302 IRKAKDQLSVFDQQKV-APLLGLADYIAYRQN 332
>gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis
NCTC 9343]
gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis NCTC 9343]
Length = 324
Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + D +KY++ GGKR+RP+L L + + + A A
Sbjct: 8 LDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK VW + T++L GD +L A+ + + S+
Sbjct: 68 IEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ ++ DV EE+YL +I+ KTAVL +A+L++ +++ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-T 246
+ L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R
Sbjct: 188 PEDAENLYDFGMQIGVAFQLQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADR 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E + + + E + Y +A SL +
Sbjct: 248 DQLEGLNHWLSATSFCPEEKISAVTELYTQIGIKAVCENKMREYYTRAMTSLGAVSVIED 307
Query: 307 KKS-LMEVVDFCLQR 320
KKS L +++ + R
Sbjct: 308 KKSELKKLMKHLMYR 322
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 54/321 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + I + ++Y + +GGKR+RP+L LA+ ++ + + ACA+E
Sbjct: 66 VNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEM 125
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ RRGK +V+G + +VL GD LLS AF V + E
Sbjct: 126 IHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAE 185
Query: 132 ALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA+ + S+ DV E + KTA L ++ + +++
Sbjct: 186 RIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIM 245
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + + L+ + ++G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 246 GGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLL--- 302
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + A ++A++ L+
Sbjct: 303 -----------------------------------GIEKSREFAEKLNKEAQEQLKEF-- 325
Query: 304 SSWKKS--LMEVVDFCLQRLN 322
+K+ L+ + ++ R N
Sbjct: 326 -DIRKAAPLIALANYIAYRDN 345
>gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis 638R]
Length = 324
Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + D +KY++ GGKR+RP+L L + + + A A
Sbjct: 8 LDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK VW + T++L GD +L A+ + + S+
Sbjct: 68 IEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ ++ DV EE+YL +I+ KTAVL +A+L++ +++ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-T 246
+ L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R
Sbjct: 188 PEDAENLYDFGMQIGVAFQLQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADR 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + E + + + E + Y +A SL +
Sbjct: 248 DQLEGLNHWLSATSFCPEEKISAVTELYTQIGIKAVCENKMREYYTRAMTSLGAVSVIED 307
Query: 307 KKS-LMEVVDFCLQR 320
KKS L +++ + R
Sbjct: 308 KKSELKKLMKHLMYR 322
>gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
Length = 349
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 135/320 (42%), Gaps = 13/320 (4%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN I K +D + + +GGKR RP++ A + A AI
Sbjct: 31 DLVNSFIPKGTHADMDRYLYQPLMAYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAI 90
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS------QAFCMVIETK 125
E HTA L+HDD+ D++ LRRG+ L G ++ GD LS + + +
Sbjct: 91 EHFHTAALIHDDIADEAELRRGEPCMHLTEGMGLAINAGDLALSLVNGTVVSDENLDDAT 150
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---AALEVSSL 182
+ L + EG+ + +++ +++ + L + ++
Sbjct: 151 KVRVITELIDMTRRTIEGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAI 210
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I G +AL++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A
Sbjct: 211 IGGGTEVEVEALRNYGLDTGLAFQIQDDLLNLVGSEESTKKDFRNDITEGKRTLMVVHAL 270
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCL 301
Q R + ++ + L +A IM + ++ A + AK+ L +
Sbjct: 271 QHSDDR--DRLIDILSSKEKDQAVLAEAVAIMEASGSIDYARNYAENLTSIAKNRLTDMV 328
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S+ + L+ + D+ + RL
Sbjct: 329 RPSTARDLLVSMADWFVSRL 348
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 128/335 (38%), Gaps = 54/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + + ++Y + +GGKR+RP L +A ++
Sbjct: 54 DFAAYIAEKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTM 113
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + ACA+E IHT +L+HDD+ RRGK V+G + ++L GD LLS AF
Sbjct: 114 DVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFE 173
Query: 120 MVIETKSQEAL------------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ + + + + ++ +VT E ++
Sbjct: 174 YIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAH 233
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L ++ +++AG + + L Y +G+AFQ+VDD+LD ++GK G+
Sbjct: 234 KTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGK 293
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L +++ A
Sbjct: 294 DEAVGKATYPSLV--------------------------------------GLEESKKIA 315
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AKD L+ L+ + D+ R N
Sbjct: 316 DKLIADAKDLLKDYDQEKA-APLIGLADYIKNRQN 349
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 298
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 58/335 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + EK++ + + + +I + ++Y +F+GGKRLRP+L L + +L +
Sbjct: 4 ERLTEYLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGK 63
Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + +ACAIE IHT +L+HDD+ LRRGK +V+G ++L GD LL++
Sbjct: 64 EADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNK 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIK 166
A + + + + A ++ + S E +
Sbjct: 124 AAEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHL 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT+ L A+ + +AG + V + YG NLG+AFQ+ DD+LD+ G+ ++GK+IG
Sbjct: 184 KKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIG 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D + K T + +
Sbjct: 244 KDIKEKKNTFVTFY--------------------------------------GIEKAQNY 265
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSL-MEVVDFCLQR 320
S+ +KA + + + L +E+ ++ + R
Sbjct: 266 VESFSKKAIEIVEKYD----RMGLFIELTNYLITR 296
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 67/332 (20%), Positives = 124/332 (37%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ +N + + I + ++Y + +GGKR+RP L LA ++
Sbjct: 77 DFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRVRPALCLAACELVGGNE 136
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAAR---------LVWGNQTSVLVG 110
+ ACA+E IHT +L+HDD +D+ LRRGK L ++
Sbjct: 137 SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLALAFE 196
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ A ++ A L G++ + +V E + KTA
Sbjct: 197 HIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKLEFIHVHKTA 256
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D
Sbjct: 257 KLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLV 316
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + A
Sbjct: 317 ADKVTYPKLM--------------------------------------GIDKSREFAEKL 338
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ L L+ + ++ R N
Sbjct: 339 NKEAQEQLAGFDPEKA-APLIALANYIAYRQN 369
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K E V + + + + D ++Y + +GGKRLRP+L LA +
Sbjct: 6 DFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGDA 65
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ V A A+E IHT +L+H +DD +RRG+ V+G ++L GD LL++AF
Sbjct: 66 KHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFE 125
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV + L V G S+ V E ++ KT
Sbjct: 126 MVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGA 185
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L SA + +LI +++ AL++Y +G+AFQ++DD+LD +GK G+D
Sbjct: 186 LLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLA 245
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 246 DKTTYPKLL--------------------------------------GLEESRKRADDLV 267
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++AK++L+ P S L+ + DF R
Sbjct: 268 REAKEALQ--PWSDQAMPLLALADFITSR 294
>gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 465
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 98/377 (25%), Positives = 157/377 (41%), Gaps = 68/377 (18%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
+ K+++ + I K + S M+ V KY +S GK +RP+L L +
Sbjct: 92 IVGKELKFLTKNIRKLLGSGHPMLDKVAKYYTWSEGKHVRPLLVLLMSQATALAPRNPHT 151
Query: 57 -------------------------------------------LEYRG---DNHVLLACA 70
LA
Sbjct: 152 HSTSISSQQQSYISEPISSPLVLADANPDTSPLTAPAAELEGIFGEDPNILPAQRRLAEI 211
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IHTA+LLHDDV+D++ RR +A +GN+ +VL GDFLL +A + ++ E +
Sbjct: 212 TELIHTASLLHDDVIDNAVTRRSSSSANTQFGNKMAVLAGDFLLGRASVALARLRNPEVI 271
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLI 183
E L+ V L EGE QL + + + + I KTA L S + ++L+
Sbjct: 272 ELLATVIANLVEGEFMQLKNTASDERSPVFTDDTITYYLQKTYLKTASLISKSCRAAALL 331
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ +A SYG NLG+AFQLVDD+LDY E GK G D G T P++ A++
Sbjct: 332 GNSTPDIVEAAYSYGRNLGLAFQLVDDMLDYTVNSAEFGKPAGADLELGLATAPLLFAWK 391
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + ++++A ++ + + T A Y KA ++ LPD
Sbjct: 392 ENPELGA-----LVGRKFEQEGDVERARELVARSNGIEQTRALAQEYADKAAAAIDILPD 446
Query: 304 SSWKKSLMEVVDFCLQR 320
S K L+++ + ++R
Sbjct: 447 SEAKNGLLDMCEKTMKR 463
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 134/329 (40%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K E V + + + + + ++Y + +GGKRLRP+L LA ++
Sbjct: 22 DFSSYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LLS+AF
Sbjct: 82 SLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFE 141
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L V L+ + + E + + KTA
Sbjct: 142 MVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAA 201
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LI G S A+++Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 202 LLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLIA 261
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + RA
Sbjct: 262 DKTTYPKLL--------------------------------------GLEPSRARALELV 283
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK L D + + L+ + D+ R
Sbjct: 284 AQAKAVLEPWKDKA--QPLLALADYVASR 310
>gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
gamma proteobacterium EBAC20E09]
Length = 314
Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 85/313 (27%), Positives = 162/313 (51%), Gaps = 7/313 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K+++ V LI I + ++ + Y+ S GK++R L L + + + L
Sbjct: 7 ITKELKAVEKLIKSDINKEKTILG-LYNYIFKSDGKKIRSRLNLIASS--SSKNSDRYKL 63
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A IE +HTATL+HDDVVD+++ RRG ++ +W N VL+GD++ S+AF +++E
Sbjct: 64 ASIIELLHTATLVHDDVVDNASTRRGAISVNSLWSNAHGVLIGDYIYSKAFMLMVEIGKT 123
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L L+ +++GEL QL N+ ++ + KT LF A+ + +++AG
Sbjct: 124 DILAELADATNDISQGELIQLDAISNIKISLNKLKKISYFKTGRLFEASAKTGAMLAGAN 183
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + + N+GI FQ+ DD+LDY GK +D + GK T P A + ++
Sbjct: 184 KNFIKNISESAKNIGILFQIKDDLLDYSNSSKT-GKQSFQDLKEGKITYPFFFALKNSSQ 242
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+EK S + + +++ KKA ++ + L+ T+ A + + ++ + + + +
Sbjct: 243 KEKKQLISFLGNKRLNE---KKALALISKLNGLIKTQQLAEKFYTSSINTAKTINNQFIR 299
Query: 308 KSLMEVVDFCLQR 320
+ ++E+ + L R
Sbjct: 300 QEMIELANIALNR 312
>gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833]
gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833]
Length = 358
Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 66/324 (20%), Positives = 112/324 (34%), Gaps = 36/324 (11%)
Query: 14 KVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGD 62
+V+ I + + + + D + SGGKRLRP
Sbjct: 14 EVDRSIRRFLDRQRPLFFDDPQLATLLDAAE-AFLSGGKRLRPAFCYWGWRAAGGGSDDA 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV------------- 109
A ++E + + L+HDDV+D S +RRG +A +
Sbjct: 73 RLYNAAASLELLQASALIHDDVMDASDVRRGMPSAHRRFERMHLESRWHGSAAQFGENAA 132
Query: 110 ---GDFLLSQAFCMVIET--------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
G+ LL A M + +Q + + +L + + + +
Sbjct: 133 VLLGNLLLVWAGEMWRTSGLPAEALAVAQPVHDHMLTELMCGQYLDLLEQAQGEGTFDSA 192
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
K +V L + + YG +GIAFQL DD+L G+
Sbjct: 193 LRVALYKSGKYSVEQPLRLGLLLAAQSRLPWIDTLCAQYGQRVGIAFQLRDDILGVFGDP 252
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
E GK G+D R GK T+ + + T + + + + + E + I+ E
Sbjct: 253 AETGKPAGDDLREGKRTMLIARTLAQATPEQAEVVRKLLGNPDLDAEGVATLRTIIEETG 312
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP 302
AL E Y +A +L+ P
Sbjct: 313 ALAACEEMIKRYLDEALHALQEAP 336
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 54/321 (16%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + + + ++Y I SGGKR+RP+L +A ++ + + +ACAIE
Sbjct: 101 VNQALDRAVPLRFPQKLHESMRYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEM 160
Query: 74 IHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IH TLLHDD+ D+ +RRGK V+G T+++ G LLS AF + + S+
Sbjct: 161 IHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGN 220
Query: 132 ALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L + G+ L + V + + KTAVL +++ +
Sbjct: 221 DRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQWIHAHKTAVLLESSVVCGA 280
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + ++ Y +GI FQ+VDD+LD E+GK G+D + K T P ++
Sbjct: 281 IIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGKTAGKDLMSDKATYPKLM- 339
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L ++ + +AK L
Sbjct: 340 -------------------------------------GLEKSKQFSIELLDRAKKELSYF 362
Query: 302 PDSSWKKS-LMEVVDFCLQRL 321
K + L+ + D+ R
Sbjct: 363 D--PAKTAPLLALADYIAFRQ 381
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 81/318 (25%), Positives = 135/318 (42%), Gaps = 51/318 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+V + + + + + ++Y + +GGKRLRP+L LA + + A A+E
Sbjct: 21 QVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEVALALPTAVALE 80
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL++AF MV
Sbjct: 81 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAFEMVALRSPGVPA 140
Query: 131 EALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L V G S+ DV ++ KT L A + ++
Sbjct: 141 ERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTGALLQACVLTGAM 200
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IAG + Q L++Y +G+AFQ++DD+LD +GK G+D K T P +L
Sbjct: 201 IAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLL-- 258
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L ++ RA + +AK +L+
Sbjct: 259 ------------------------------------GLEESRQRADALVAEAKAALQPWQ 282
Query: 303 DSSWKKSLMEVVDFCLQR 320
S+ + L+ + D+ R
Sbjct: 283 ASA--QPLLALADYITSR 298
>gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 524
Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 114/258 (44%), Positives = 165/258 (63%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ DM +V+ +I +R+ S V ++ V +Y+I +GGKRLRP L L L Y+G+
Sbjct: 13 SIVEPDMREVDRVIAQRLDSGVPLVGSVSQYIISAGGKRLRPALLLLCCGALGYKGEQRF 72
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+A +EFIHTATLLHDDVVDDS LRRG A +GN SVLVGDFL S+AF M+++ +
Sbjct: 73 NMAAVVEFIHTATLLHDDVVDDSDLRRGAPTANARFGNPASVLVGDFLYSRAFQMMVDAQ 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S ++ L+ ++EGE+ QL N + E YL VI+SKTA LF A+ V ++++
Sbjct: 133 SMRIMQVLADATNIISEGEVMQLMNMHNAALDEAGYLQVIRSKTAKLFEASARVGAILSQ 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ +A +G +G AFQ++DDVLDY G+ MGKN+G+D R GK TLP+I A QRG
Sbjct: 193 ASETHEEACAEFGQAMGTAFQVIDDVLDYAGDATVMGKNLGDDLREGKTTLPLIAAMQRG 252
Query: 246 TKREKNFWKSTINDGKIS 263
T+ E++ ++ I G ++
Sbjct: 253 TESERSTIQTAIETGDLT 270
>gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis EAS054]
gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
tuberculosis EAS054]
gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
tuberculosis EAS054]
Length = 359
Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +RP L A + + A ++E +H +L+HDD++D RR + +W
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALW 131
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTE 158
G+ ++L GD +LS A ++++ S A+S L G+ + DV
Sbjct: 132 GDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVAL 191
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++ L + + KTA L +A+ EV +L+AG SVR+AL +YG ++G+AFQLVDD+L G
Sbjct: 192 DECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRP 251
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVENLKKAFIIMR 275
GK + D R+ K TLPV G + +++ S + L ++
Sbjct: 252 EITGKPVYSDLRSRKKTLPVTWTVAHGGLAGRRLAAWLVDETGSQTASDDELAAVAELIE 311
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRL 321
A + + D + +PD + L ++ + + R
Sbjct: 312 CGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAE-LQDLAHYIVDRQ 358
>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
Length = 296
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 128/325 (39%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ + ++ S + D + Y + GGKR+RP L A ML + + A
Sbjct: 12 QRIDDCLSAQLESLPAMAPRLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAA 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +LLHDD+ +D+ LRRG+ + T++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMP 131
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++L A + + + G+ L E A++ A
Sbjct: 132 DSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVA 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A V ++ AL++Y +G+AFQ+ DD+LD G+ +GK G D K T P
Sbjct: 192 LGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A KA +
Sbjct: 252 ----------------------------------ALL----GLENARELARELHGKALTA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ LP + L D+ ++R +
Sbjct: 274 LQSLPYN--TDILEAFADYIIERTH 296
>gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 244
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 101/243 (41%), Positives = 144/243 (59%), Gaps = 1/243 (0%)
Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
TLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ S + LE +S
Sbjct: 1 TLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAV 60
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++AG + L+ Y
Sbjct: 61 NVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDY 120
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I
Sbjct: 121 GRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAI 180
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
G L+ M +L T RA KA +L+ LPD+ W+++L+ +
Sbjct: 181 EQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIA 239
Query: 318 LQR 320
+QR
Sbjct: 240 VQR 242
>gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 190
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + +AL+++G +LG+AFQ
Sbjct: 17 QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQ 76
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
LVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + + I G + E+
Sbjct: 77 LVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQAALVRQAIQKGGL--ED 134
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ + AL T A Y +A L LP S ++ +L+E+ +F + R +
Sbjct: 135 LESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDALVELSEFAVARTH 190
>gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
DSM 14838]
Length = 324
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E N I + + V+Y++ GGKR+RP+L L + + A
Sbjct: 8 LENFNSHIAGLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + E S
Sbjct: 68 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPSTFLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + + DVT E+YL +I+ KTAVL +A+L++ + + G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMEFEQRNDVTAEEYLEMIRLKTAVLLAASLKIGARLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT- 246
L +GM++G+AFQL DD+LD G GKNIG D K T +I A +
Sbjct: 188 VEDADRLYDFGMHIGVAFQLKDDLLDVYGNAKVFGKNIGGDILCNKKTYMLIKALEHANA 247
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E + + E + Y +A +SL
Sbjct: 248 DQHNQLNSWINAETFQPAEKIAAVTELYDRIGVKAVCENKILEYSNRAMESLAA 301
>gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 324
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++K+N I + + + D VKY++ GGKR+RP+L L + + + A A
Sbjct: 8 LDKINSHISDIQFTRTPVGLYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPATA 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + +RRGK VW + T++L GD ++ A+ + S+
Sbjct: 68 IEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSSEYLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + DV EE+YL +I+ KTAVL +A+L++ +++ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMGFESRDDVKEEEYLEMIRLKTAVLLAASLKIGAILGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R +
Sbjct: 188 REDAENLYDFGMQIGVAFQLQDDLLDVYGDSAVFGKNIGGDILCNKKTYMLIKALERADR 247
Query: 248 RE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + + E + + + E + Y +A SL +
Sbjct: 248 NQLDELNRWLNATLFCAEEKISAVTELYNQIGIKAVCENKMREYYTRAMTSLGAVSVIED 307
Query: 307 KKS-LMEVVDFCLQR 320
+KS L +++ + R
Sbjct: 308 RKSELKKLMKHLMYR 322
>gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
Length = 171
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y + LA
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYDDEKLYSLAA 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S
Sbjct: 74 MVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQLMVASGSMRV 133
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
LE ++ G +
Sbjct: 134 LEVMADANQHYCRGRSHAADEHRQYGHYRRTIYPSHP 170
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 127/321 (39%), Gaps = 56/321 (17%)
Query: 19 ILKRICSDVEMI-----PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
I + + S V +I + ++Y + SGGKR+RP++ +A ++ + ACA E
Sbjct: 57 INEALDSAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAACELVGGHESTVMPTACAQEM 116
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IH+ +++ DD +D+ RRGK++ V+G + ++L L + A V+ E
Sbjct: 117 IHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVRSLQALAVDHVVTATRGVPPE 176
Query: 132 ALSLVACTLAEGELRQ----------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L +A + S ++ +V+ E H+ KT L ++ +
Sbjct: 177 RLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQLEHIHMQKTGTLCEGSVVSGA 236
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + L+ + +G+ FQ+VDDVLD E+GK G+D K T P ++
Sbjct: 237 IIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTKSSMELGKPAGKDVVAAKATYPRLI- 295
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + A +AK+ L
Sbjct: 296 -------------------------------------GIEKSRELALKLNSEAKEQLSGF 318
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
L+ + D+ + R N
Sbjct: 319 DQEKA-APLIALADYIVARQN 338
>gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
B-30929]
gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
B-30929]
Length = 325
Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
+ + +L + + I + L+ SGGK LRP + E
Sbjct: 12 INLKLIALEPYLLNAVNLPNQPIHHKISQLLKSGGKFLRPGFFYIYSEFGQEVDPAKIKA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125
A A+E +H ATL+HDDV+D+S +RRG +G + ++ GD+L + F ++ T+
Sbjct: 72 GAAAVELLHVATLIHDDVIDESPIRRGIETIHTEYGQKNAIYAGDYLFTCYFTQVLKSTQ 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
++ T+ GEL Q+ + N +TE DY H I KTA LF + S+L++
Sbjct: 132 DPANMKRHVDAMQTILAGELDQMKYNFNQQMTEADYFHEITGKTAELFRLCFQQSALVSQ 191
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + + G+ +G A+Q++DD+LDY G+ ++ K + ED ++G TLP+I A Q
Sbjct: 192 ASDQIFKLGGEIGLTIGQAYQILDDILDYSGDPHQTKKPVLEDLKSGVYTLPLIFALQTA 251
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K+ K +++ E++ + I+ ++ L A KA+ + LP+
Sbjct: 252 QKQLKPL---LDKREQLTHEDIAQIQAIVVQSGGLQQAIQSANQLTAKAEKLIAQLPERR 308
Query: 306 WKK 308
K+
Sbjct: 309 AKR 311
>gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 59/337 (17%)
Query: 5 EDLTLKDMEK----VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ LK++++ + + + + + E I ++Y + +GGKRLRP+L LA A +
Sbjct: 3 KKAFLKELKRKVNIIEEALSQYLPGEDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEAV 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ACAIE IHT +L+HDD+ RRGK +V+G ++L GD LL+
Sbjct: 63 GGDVKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLT 122
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + ++ ++ G S+NLD++ E ++
Sbjct: 123 LAFEVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKYIH 182
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT LF AAL+ ++++ AL Y LG+ FQ+ DD+LD G+ ++GK +
Sbjct: 183 IHKTGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEKLGKPV 242
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + K T P I L + +
Sbjct: 243 GSDIKKKKATYPSIF--------------------------------------GLQEAKQ 264
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A ++ SL + + L E+ + L+R N
Sbjct: 265 MAREAVAESLMSLEGFDERA--DFLREMARYLLERDN 299
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 81/330 (24%), Positives = 142/330 (43%), Gaps = 52/330 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+++L E + + + + + + ++Y + +GGKRLRP+L +A A +
Sbjct: 1 MKELWRNRQELIERALRDELAKTDILDNTLREAMEYSLMAGGKRLRPILLMAAADAVGSD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
G + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LL+ AF
Sbjct: 61 GTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDALLTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAV 171
+++ K A+ L +V + ++N ++ ++ V KT
Sbjct: 121 TVLLRQKDVPAVSLLRVVDEISRAAGAEGMVGGQVLDLQAENKTISLDELRRVHMGKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
LF AAL +++ G AL +Y + G+AFQ+ DD+LD G ++GK +G D +N
Sbjct: 181 LFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGSDEKN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T + +L + A
Sbjct: 241 HKSTYVTLT--------------------------------------SLSAAQELARRTV 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A +L S L E+V + + R
Sbjct: 263 DEALAALAVF--GSEASFLRELVSYLVNRK 290
>gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 131
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/120 (46%), Positives = 75/120 (62%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+
Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 52/321 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+VN + + + I + ++Y + +GGKR+RP+L +A+ ++ + + ACA+E
Sbjct: 7 QVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTACALE 66
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRG + V+G T+VL GD LL+ AF V +
Sbjct: 67 MIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKNVSS 126
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSL 182
+ + L + ++ + E + + KTA L AA+ ++
Sbjct: 127 DRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAI 186
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P ++
Sbjct: 187 MGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATYPKLI-- 244
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + A +A L
Sbjct: 245 ------------------------------------GIDEAKKFAAQLTDQANQELGFYD 268
Query: 303 DSSWKKS-LMEVVDFCLQRLN 322
K + L + + R N
Sbjct: 269 --PVKAAPLYHLASYIASRQN 287
>gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
Length = 324
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 5/299 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EK+N I + D V Y++ GGKR+RP+L L + + ++ A
Sbjct: 8 LEKINSHIADLQFVRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + +
Sbjct: 68 IEVYHNYTLLHDDLMDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + + DV EE+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+N+G+AFQL DD+LD G+ GKNIG D K T +I A K
Sbjct: 188 AEDAERLYDFGVNMGVAFQLKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALDHADK 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + I + E + + + E + Y KA SL + S
Sbjct: 248 EQLSQLEHWITIADFNPVEKIAAVTDLYNQIGVKGLCENKMVEYSDKAMGSLAAVSVSD 306
>gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
Length = 315
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 10/311 (3%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYRGDNHVLLACAIE 72
V IL D + + +++K +GGKR+R +L L A + E + + +A +E
Sbjct: 12 VLEDILDITKCDDDRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNFELNRKDIIRMASIVE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L+HDD++D++ RRG + + N+ ++ VGD+L + V + +
Sbjct: 72 IIHTASLIHDDIIDNADTRRGSITMNKEYTNEFALHVGDYLFAIVLNEVAKFSDERIHNY 131
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L+ L GEL Q N+ DYL IK KTA+L + A S+++ + +
Sbjct: 132 LAETLKELCIGELIQADGLYNIKTRRIDYLKKIKRKTAILIAFACVAGSIVSKASDENIK 191
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ SYG LG+++Q++DD LD+ G +GK +G+D NG TLP +LA + ++ NF
Sbjct: 192 SAFSYGYYLGMSYQIIDDYLDFAGGAENLGKEVGQDLMNGNITLPALLAKEENSELFSNF 251
Query: 253 WKSTINDGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
G+ S E + ++ N + L +T + Y KA++S+ + S K L
Sbjct: 252 T------GETSTEEKTEIIDYIKNNEKILSETLDISRRYLLKAQNSIDKIEIS-VKNELT 304
Query: 312 EVVDFCLQRLN 322
+++ +R N
Sbjct: 305 FIMNKLARRDN 315
>gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia]
Length = 346
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/304 (18%), Positives = 111/304 (36%), Gaps = 13/304 (4%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I D + LI GGKR RP A + + + +A +E IH ATL+ DD+ DDS+
Sbjct: 45 ISDPIYDLIDRGGKRWRPAFCFLIADLFKRAHEELYEVAALVELIHNATLVVDDIEDDSS 104
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL------VACTLAEG 143
+RR + +G +V ++L + + + + + + + G
Sbjct: 105 VRRNDKCVHIKYGLDVAVNAANYLYFAPLHYFLNSANYSNDQKMKMLEVSLSNMKIVHFG 164
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---SYGMN 200
+ + K + +K + + A + L V + K + +
Sbjct: 165 QAWDIFWHKQVCDIIPTEEQYLKMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFAVQ 224
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+GIAFQ+ DD+L+ G + L K++K +
Sbjct: 225 IGIAFQIQDDILNLNGGDKYKQTKGYLGEDIHE--GKFSLIVIHSLKQQKGRLLEILKSR 282
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD--SSWKKSLMEVVDFCL 318
E + +A I+++ +L R+ + A + L K L + + +
Sbjct: 283 TQDQETINEAISIIKQTGSLEYAHKRSLEIIEDAWKEIENLEFQCPEAKSRLKDFAKYLI 342
Query: 319 QRLN 322
+R +
Sbjct: 343 ERDS 346
>gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 338
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 25/335 (7%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPD--VV-KYLI-----------FSGGKRLRPMLTLATA 54
+ + + E + + +Y + F GK LRP L L +
Sbjct: 4 SDERTAIEAAMRAAFPLADERVARFYAMQEYHLGWRDEELRPATFDPGKLLRPRLCLLSC 63
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + + LA AI+ IH +L+HDD+ D S RRG+ +WG + GD +
Sbjct: 64 RAVGGDPRDALPLAAAIQLIHDFSLIHDDIQDQSDTRRGRPTVWKLWGLAQGINTGDGMF 123
Query: 115 SQAFCMVIE--------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+ A + + L T+ EG+ LS NL++ E YL +I+
Sbjct: 124 TVAHLSLHRLALTSLPAATILDVLRRFDETILTICEGQFLDLSYEGNLEIDEAAYLAMIE 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L +A+ E+ +L+ G QAL +G LG+AFQ+ DDVL G+ GK
Sbjct: 184 RKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIEDDVLGIWGDPAVTGKPFA 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K +LPVI A R + + + +++A I+ + V E
Sbjct: 244 ADLYRRKLSLPVIHALTTSPDR--ERLMNLYAQATLDDDAVRQALAILDAAGSRVYAEAT 301
Query: 287 AYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A +Y +A +L D++ + L + L R
Sbjct: 302 AAAYHGEAFAALDRARGDAAALEELRAIATSLLGR 336
>gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 205
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+F M++E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+
Sbjct: 2 SFEMMVELGSMEVMRILSKATRVIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEAS 61
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ + ++ +AL+++G +LG+AFQLVDD+LDY G+ +GKN+G+D GKPTL
Sbjct: 62 THSAAALCNASDAQTEALRTFGDHLGVAFQLVDDLLDYLGDAETLGKNVGDDLAEGKPTL 121
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P+I + G+ + + I G + E+L+ + AL T A Y +A
Sbjct: 122 PLIYTMREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTARLARDYAARAIA 179
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP S ++ +L+E+ +F + R +
Sbjct: 180 CLDALPPSEYRDALVELSEFAVARTH 205
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 113/320 (35%), Gaps = 53/320 (16%)
Query: 13 EKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V + +R+ + + ++Y + +GGKR+RP+L L + M + + ACA
Sbjct: 15 ARVEEALRERVGQMGRYADLREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACA 74
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMV 121
+E IHT +L+HDD+ + + L+QA
Sbjct: 75 VEMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLTQAQLTA 134
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ A +L+ + G+ ++ +T + + KT L +AA E+
Sbjct: 135 QQVVDAVACLSLAAGPDGMVGGQALDMAGEG-RSLTRAELEQLQSLKTGALIAAAAELGC 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ AG R++++ Y LG AFQ+ DD+LD E+GK G D K T +L
Sbjct: 194 IAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLL- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + +A +L
Sbjct: 253 -------------------------------------GLDRSRELVAELTAQAVSALDGF 275
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S L+ + + QR
Sbjct: 276 -ASP--DFLVWLANTLAQRT 292
>gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
Length = 298
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 75/338 (22%), Positives = 124/338 (36%), Gaps = 56/338 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M +LE + +V + + + + + + ++Y + GGKR+RP+L AT L
Sbjct: 1 MTVLERYLPEYQARVEAALERWLPPAQTHPARLHEAMRYAVLGGGKRMRPLLVYATGDAL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
ACA+E IH +L+H +DD LRRG+ + T++LVGD L S
Sbjct: 61 RLPRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDALQS 120
Query: 116 QAFCMVIETKSQEALEALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHV 164
AF ++ + EA + +A G+ E
Sbjct: 121 LAFRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYEAVGRQVTVAELEDMH 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
I A++ ++ + + + + L Y +G+AFQ+ DDVLD G+ +GK+
Sbjct: 181 IHKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLDVIGDEARLGKS 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G D R KPT P ++ L +
Sbjct: 241 QGADARLNKPTYP----------------------------------ALL----GLDEAR 262
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A Q A SL L V ++ + R +
Sbjct: 263 DFARQLCQDAVASLEDF--GPEADCLRSVAEYIVARDH 298
>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 295
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 118/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+VN + + + + ++Y + +GGKR+RP+L A L + + AC
Sbjct: 11 ARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------- 118
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFTALLDPALS 130
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
C + AL+ + G+ L A++ ++
Sbjct: 131 DCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + QAL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLDAAKAYALELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
LR + + L ++ + ++R +
Sbjct: 273 LRPFD--AAAEPLRDLARYIVERRS 295
>gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
Length = 269
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 4/272 (1%)
Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
L +Y+ D +A A+E IH A+L+HDDV+D + LRRG WG++ ++
Sbjct: 1 MLLAGKFGDYKLDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYT 60
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
GD+L +++ + + EA +ALS + +GE+ Q+ N D YL IK KT
Sbjct: 61 GDYLFAKSLECITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKT 120
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A+L +A+ ++ ++ AG L YG +G+++Q++DD+LD+ ++GK G D
Sbjct: 121 ALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDL 180
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
G TLP + + K + + +K+ ++ + A+ +
Sbjct: 181 LQGNITLPALY----AMEDPILCKKIKSVHENTTADEMKEIIEAVKNSAAIDKAFAFSER 236
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
Y KA + ++ LP K +L V + +R
Sbjct: 237 YLHKALEMIKPLPRGQAKYALQNVAKYIGKRK 268
>gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
CCMP1335]
gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
CCMP1335]
Length = 320
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 81/323 (25%), Positives = 144/323 (44%), Gaps = 29/323 (8%)
Query: 23 ICSDVEMIPDVVKYLIFS-----GGKRLRPMLTLATALM------LEYRGDNHV------ 65
+ +D ++ +Y S GK++RP++ + + E
Sbjct: 2 VGTDHPVLNSAARYFFNSEDGKGKGKQVRPVMVMLFSRAMMQMGTGEGNPSTAHALKSQR 61
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA E IHTA+L HDDV+D++ RRG+ AA +GN+ ++L GD+LL++A + +
Sbjct: 62 RLAEITEMIHTASLFHDDVIDEADTRRGQPAAHRAFGNKMAILAGDYLLARASICLARLR 121
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV------ 179
+ + +E +S V L GE+ Q+ ++ E YL KTA L + + +
Sbjct: 122 NVDVVECMSTVIEHLVRGEVLQIKDNRTGVPDMEGYLRKNFYKTASLMANSCKSAALLGA 181
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S+ +G+ V +A YG ++G+AFQL+DD LD+ G +GK D G T PV+
Sbjct: 182 SANGSGISPVVVEAAYLYGKHIGVAFQLIDDALDFEGSAASLGKPALADLNAGLSTAPVL 241
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + ++ A + + T+ A + + A +++
Sbjct: 242 FA-----AEIHKELIPAMARKFKEAGDINFALRCIEGAGGVRKTKELAAIHAEVAMNAVA 296
Query: 300 C-LPDSSWKKSLMEVVDFCLQRL 321
L S ++ SL+ + + R
Sbjct: 297 SALEPSPFRDSLVHLACRVVDRS 319
>gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
Length = 328
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN 63
E K++ V+ I + + I ++ + S GK LRP L L T+ + E ++
Sbjct: 8 EQELKKNLMNVSSTIESTVATAHGFIRPILLDHVQSVGKMLRPALILITSALGEQEVTED 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ + +E IH A+L+HDD++D +A RRGK G + +VL GDFLL++A +
Sbjct: 68 AIRVGSILELIHLASLVHDDIIDSAAKRRGKSTVFAKVGAKQAVLAGDFLLAKALMLTSG 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ +S L E EL Q + + ++ YL I KTA LF+ + +
Sbjct: 128 KERGMDSRVVSRALSRLCESELEQDAGQGDFFISHHTYLRRIAGKTASLFALSCYAGVAL 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + + G +G+AFQ+ DD+LDY G +++GK+ G D + G PTLP+I A +
Sbjct: 188 QESEPTRQMLCHRIGYCMGMAFQIQDDILDYAGSSSKLGKHTGNDLKCGIPTLPLIYALK 247
Query: 244 RGTKREKNFWKST--INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + + + +K+A I++ + + A SY ++A ++ L
Sbjct: 248 QERENGQTQLHDLLYQASTPLKEKTVKQALILVESLGGVQKAQILAESYKKRAFSDIKRL 307
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
++ L + R
Sbjct: 308 AHPQVERQLSTLFTKLSTRS 327
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 132/327 (40%), Gaps = 56/327 (17%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN ++ + + + I + ++Y + SGGKR+RPML LA ++ + + ACA
Sbjct: 69 KSVNEVLDEAVPLCEPVLKIREAMRYTLLSGGKRVRPMLCLAACELVGGQESTAMPCACA 128
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH ++L+ DD +DD LRRGK V+G ++L D L++ A +E+ S +
Sbjct: 129 VEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIALAIKHTVESTSLD 188
Query: 129 ALEALS------------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSA 175
+ + T +L I KTA L A
Sbjct: 189 VPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLEFIHIHKTAALLEA 248
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++ G + + ++SY +G+ FQ+VDDVLD E+GK G+D + K T
Sbjct: 249 AAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLISEKLT 308
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P ++ + + A ++A+
Sbjct: 309 YPKVM--------------------------------------GVEKSREYAEKLNREAR 330
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L L+ + D+ + R N
Sbjct: 331 EHLNMFDPDKA-APLLLLADYIVNRQN 356
>gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927]
gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei]
Length = 359
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 30/337 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------- 57
+ ++++ + I + + E++ KY++ SGGK LRP L A L
Sbjct: 29 SMVTREVKAMQNHISSLVANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQ 88
Query: 58 --------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ L E IHTA L+HDDV+DDS +RRGK A V
Sbjct: 89 QFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDVIDDSEMRRGKPALHCVHDV 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GDFLL++A + + ++ L GE+ Q+ +L+ EE
Sbjct: 149 KRAVLAGDFLLARASLWIASLCVPRIVVLMTTALEDLTRGEMMQMEGCFDLERYEEKTYC 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S A +A ++ A YG LGIAFQ+VDD LD G+ +GK
Sbjct: 209 KTGSLIANSLAATAVLADPSNSAHEV---AAGEYGRRLGIAFQIVDDCLDITGDEKNLGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G TLP +LA ++ +K + + + + + + +++
Sbjct: 266 RTMVDMKAGIATLPTLLAARQDSKVDA-----AVRRRFKEPGDAEICVEAIERHGCVMEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++ +LR L +S ++ L ++ L R
Sbjct: 321 LQHADQHCRRGIAALRTLHESPARERLEAAMNLLLTR 357
>gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
Length = 315
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 161/324 (49%), Gaps = 18/324 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LE 58
+K ++L ++V I S+ E + V+K +GGKR+R +L L + +
Sbjct: 2 LKQYDELV----QEVLKDIFVITKSEDEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDFN 57
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
N + +A +E IHTA+L+HDD++D + RRG + +G++ ++LVGD+L S
Sbjct: 58 NNKKNIIRMASIVEIIHTASLIHDDIIDKAETRRGNITLNKEFGDEFALLVGDYLFSIVL 117
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
V E +++ L+ L GEL Q NL+ DYL IK KTA+L + A
Sbjct: 118 REVSEFENELIHSYLATTLKELCIGELIQEDGLYNLNTRRLDYLRKIKRKTAILIAFATV 177
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S+I+G + + +G LG+++Q++DD LD+ G +GK IG+D NG TLP
Sbjct: 178 SGSIISGAKKEDVDSSYRFGYYLGMSYQIIDDYLDFAGGATSLGKEIGQDLVNGNITLPA 237
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDS 297
+ +EKN + I++E ++ N+ L +T + Y KA++S
Sbjct: 238 L------IAKEKNENLFLDFNRSINLEKKNVIIDYIKNNKDILDETLSISQRYLDKAENS 291
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
+ + + K L+ F + RL
Sbjct: 292 IAEINE-EVNKELI----FIMNRL 310
>gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 359
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 30/337 (8%)
Query: 6 DLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------- 57
+ ++++ + I + + E++ KY++ SGGK LRP L A L
Sbjct: 29 SMVTREVKAMQNHISNLVANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQ 88
Query: 58 --------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ L E IHTA L+HDDV+DDS +RRGK A V
Sbjct: 89 QFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDVIDDSEMRRGKPALHCVHDV 148
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ +VL GDFLL++A + + ++ L GE+ Q+ +L+ EE
Sbjct: 149 KRAVLAGDFLLARASLWIASLCVPRIVVLMTTALEDLTRGEMMQMEGCFDLERYEEKTYC 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
S A +A ++ A YG LGIAFQ+VDD LD G+ +GK
Sbjct: 209 KTGSLIANSLAATAVLADPSNSAHEV---AAGEYGRRLGIAFQIVDDCLDITGDEKNLGK 265
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D + G TLP +LA ++ +K + + + + + + +++
Sbjct: 266 RTMVDMKAGIATLPTLLAARQDSKVDA-----AVRRRFKEPGDAEICVEAIERHGCVMEA 320
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++ +LR L +S ++ L ++ L R
Sbjct: 321 LQHADQHCRRGIAALRTLHESPARERLEAAMNLLLTR 357
>gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
15641]
gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
15641]
Length = 354
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 15/321 (4%)
Query: 13 EKVNFLILKRICSD-VEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN I + D + + D + +Y +GGKR RP++ A + D + A A
Sbjct: 36 DLVNRFIPRGSHPDMNKYLYDPLLRYS-RNGGKRHRPLICFAACRAVGGDLDRALSAAAA 94
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE HTA L+HDD+ D++ LRRG+ L G ++ GD LS V+E + +
Sbjct: 95 IEHFHTAALIHDDIADEAELRRGEPCLHLTEGLGLAINAGDLGLSLVNGTVMEDDALDDA 154
Query: 131 EALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSS 181
+ +V+ + + D+T EDYL + KTA A + +
Sbjct: 155 TKVRVVSELITMTRRTIEGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGA 214
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ G + L++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A
Sbjct: 215 IVGGGTEGEIEGLRNYGLDTGLAFQIQDDLLNLIGAEEATKKDFRNDITEGKRTLVVVHA 274
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RC 300
Q +++ ++ + L +A +M E ++ A + AK+ L
Sbjct: 275 LQAS--TQRDRLVEILSSREKDPRVLAEAVSLMEEAGSIEYARNYAENLTSIAKNRLVEM 332
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ + + L+ + D+ + RL
Sbjct: 333 INPTPARDLLVSMADWFVNRL 353
>gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
Length = 334
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 4/323 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + + V + + ++ D ++L+ +GGKRLRP+LTL TA + +
Sbjct: 13 ALSARLTERLALVEERLRDAVTHADQLADDAARHLVNAGGKRLRPLLTLLTAELGDGSRR 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A +E H ATL HDDV+D + LRRG +A VWGN ++L GD L ++A V
Sbjct: 73 EVVDAATVVELTHLATLYHDDVMDSAPLRRGAPSAHEVWGNSVAILTGDLLFARASATVA 132
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ L G+L + + + YL V+ KTA L + + ++
Sbjct: 133 GLGPDAVRIQAATFER-LCLGQLHETVGPRPGEDPVAHYLQVLADKTASLVATSARFGAM 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG + V + + +G LG+AFQL DDV+D + GK G D R PT+P +L
Sbjct: 192 FAGCRPDVVRTVTGFGEKLGVAFQLADDVIDLTSDGTLTGKTPGTDLRERVPTMPALLLR 251
Query: 243 QRGTKREKNFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
R ++ + + L A +R + + +T RA + ++A D L
Sbjct: 252 ARAATDADPADRALVAQLDADLTDDDALAAAVAALRSHPVVAETRERAVALAREAVDELA 311
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP +++L+ D + R +
Sbjct: 312 PLPAGPVREALVAFADALVDRAS 334
>gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 324
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 5/299 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EK+N I + D V Y++ GGKR+RP+L L + + ++ A
Sbjct: 8 LEKINSHIADLQFIRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + +
Sbjct: 68 IEVYHNYTLLHDDLMDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + + DV EE+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L +G+N+G+AFQL DD+LD G+ GKNIG D K T +I A K
Sbjct: 188 AEDAERLYDFGVNMGVAFQLKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALDHADK 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + I + E + + + E + Y KA SL + S
Sbjct: 248 EQLSQLEHWITIADFNPVEKIAAVTDLYNQIGVKGLCENKMVEYSDKAMGSLAAVSVSD 306
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ +N + I + I + ++Y + +GGKR+RP L LA ++
Sbjct: 78 DFKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGND 137
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+ IHT +L+HDD +D+ LRRGK +V+G +VL GD LL+ AF
Sbjct: 138 SMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFE 197
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + LA+ ++ ++ + +V E + KTA
Sbjct: 198 HIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTA 257
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++ G + + L+ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 258 KLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQELGKTAGKDLV 317
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L + + A
Sbjct: 318 ADKVTYPKLL--------------------------------------GIEKSREFAEKL 339
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ L L+ + ++ R N
Sbjct: 340 NKEAQEQLAGFDPEKA-APLIALANYIAYRQN 370
>gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 298
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
+K + + +D ++ L +++ + + + ++Y GGKRLRP+L +AT +
Sbjct: 5 LKTMMEQVAQD---IDRLFAEQLPVPEDPRRRLVEAMRYAAIGGGKRLRPLLVVATCALF 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + AIE IH +L+HDD +D+ LRRGK + + ++VL GD L +
Sbjct: 62 NVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN----------LDVTEEDYLHVI 165
AF ++ E K + LA + + + +
Sbjct: 122 LAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLPTITRLQ 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT LF LE +++ +R LK+Y ++G+AFQ+ DD++D G+ GK +
Sbjct: 182 QLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVAGKAV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D GK T +L L
Sbjct: 242 GKDAAAGKATFLSLL--------------------------------------GLEKARS 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + +A L S L + + + R +
Sbjct: 264 QAQALVDQAIAHLSVF--GSEADYLRSIARYIVARDH 298
>gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1]
gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1]
Length = 349
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 76/320 (23%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN I K +D + D + +GGKR RP++ A + A AI
Sbjct: 31 DLVNSFIPKGTHADMDRYLYDPLISYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAI 90
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS------QAFCMVIETK 125
E HTA L+HDD+ D++ LRRG+ L G ++ GD LS + + +
Sbjct: 91 EHFHTAALIHDDIADEAELRRGEPCMHLTEGMGLAINAGDLALSLVNGTVVSDKSLDDAT 150
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---AALEVSSL 182
+ L + EG+ + +++ +++ + L + ++
Sbjct: 151 KVRVITELIDMTRRTIEGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAI 210
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I G +AL++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A
Sbjct: 211 IGGGTEIEIEALRNYGLDTGLAFQIQDDLLNLVGSEESTKKDFRNDITEGKRTLMVVHAL 270
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCL 301
Q R + ++ + L +A IM + ++ A + AK+ L +
Sbjct: 271 QHSDDR--DRLIDILSSKEKDQAVLAEAVAIMEASGSIDYARNYAENLTSIAKNRLTDMV 328
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
S+ + L+ + D+ + RL
Sbjct: 329 RPSTARDLLVSMADWFVSRL 348
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K + V + + + + D ++Y + +GGKRLRP+L LA +
Sbjct: 6 DFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGEA 65
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ V A A+E IHT +L+H +DD +RRG+ V+G ++L GD LL++AF
Sbjct: 66 KHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFE 125
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV E L V G S+ V E ++ KT
Sbjct: 126 MVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGA 185
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L SA + +LI +++ AL++Y +G+AFQ++DD+LD +GK G+D
Sbjct: 186 LLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLA 245
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 246 DKTTYPKLL--------------------------------------GLEESRKRADDLV 267
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++AK++L+ P S L+ + DF R
Sbjct: 268 REAKEALQ--PWSEQAMPLLALADFITSR 294
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/335 (21%), Positives = 128/335 (38%), Gaps = 53/335 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + +++ + + + + ++Y + +GGKR+RP+L LA M
Sbjct: 3 REFKQELASRAKEIEDYLESCLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGA 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A +E IHT +L+HDD+ +D+ LRRGK + +G ++L GD LL+QA
Sbjct: 63 CTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQA 122
Query: 118 FCMV-------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F M+ + A + + G+ + + + D + KT
Sbjct: 123 FAMMLKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMKTG 182
Query: 171 VLFSAALEVSSL---IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
L AA ++ +YG N+G+AFQ+VDD+LD G+ +GK +G
Sbjct: 183 ALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPVGS 242
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P L L + A
Sbjct: 243 DESVNKSTYPRFL--------------------------------------GLEKSRELA 264
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK LR + L + + + R +
Sbjct: 265 QTAADEAKTCLRDY-QGQGRDFLYRLAQYIVDRAS 298
>gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5]
Length = 324
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 7/317 (2%)
Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ + + + ++ E + + Y + GGKRLRPML + + R + A A
Sbjct: 9 LLAIENYLAQTEFPAEPERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPAAAA 68
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---Q 127
+E H TLLHDD++D++A+RRGK + WG ++L GD ++ A+ ++ E +
Sbjct: 69 VEVFHNFTLLHDDIMDNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVPAELLP 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L + +A + EG+ + V+ +Y+H+I+ KT+VL + ++ + +++ G
Sbjct: 129 RILGTFNTMALEVCEGQQYDMDFESKRKVSVVEYMHMIELKTSVLLAGSITIGAMLGGAS 188
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L+ + + LG+AFQL DD+LD G+ +GK IG D GK T +I A R +
Sbjct: 189 EEDCRKLRRFAIELGLAFQLQDDLLDSYGDDR-LGKAIGGDILEGKQTYLMITAMSRADE 247
Query: 248 REKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++T D ++S E + I TE + ++A L L
Sbjct: 248 ATREALRTTRLDARLSDAEKIAAVKSIYDRLDVPRLTEQQISLRFERALSILDTLSADKA 307
Query: 307 K-KSLMEVVDFCLQRLN 322
+ + + E + + R N
Sbjct: 308 RTQRIREYAESLIGRKN 324
>gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 376
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/324 (24%), Positives = 132/324 (40%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + V
Sbjct: 52 LRAAVDRLAPPMDTVAAYHFGWIDAAGNPADGDGGKAVRPALAVLSAQAAGAAPEVGVPG 111
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A + +
Sbjct: 112 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEILLELGTV 171
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + L +G+ + +S VT E+ L + +KT L + A + +++
Sbjct: 172 EAGRATRRLTTASRALIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACACSIGAVLG 231
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 232 GADDRTADTLEKYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 291
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 292 GGPASRRLGELLAEDAKSSDFENFSEEEFAARAALIEEAGGREWTAQEARRQHTIAIEAL 351
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + L+ + DF + R
Sbjct: 352 DTIEMPQQVRAQLVALADFVVVRK 375
>gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes LO28]
Length = 292
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 7/296 (2%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLA 68
D++ V + K + +L+ +GGKR+RPM +A + +
Sbjct: 1 DIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNAS 60
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K
Sbjct: 61 VAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVA 120
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G
Sbjct: 121 AHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSE 180
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLP +
Sbjct: 181 ADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLP----VFFAMED 236
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + + E + +++ A E A +Y +K+ ++R S
Sbjct: 237 PFLKKRISQITEETPAEEIAVLVEEVKKTGA-KQAEDVATTYLKKSSRNIRFFAAS 291
>gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
Length = 293
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 128/332 (38%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +V+ + + S+ ++ + ++Y +F+GGKR+RP L +L
Sbjct: 2 EIRQQLKHYQSRVDNHLENCLPSESIDPLLQESMRYSLFNGGKRVRPALVYLVNQILGGT 61
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE IH+ +L+H +DD LRRGK + + T++L GD L AF
Sbjct: 62 DEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDALQCLAF 121
Query: 119 CMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + Q A + L+ + G+ L E+ A
Sbjct: 122 ELLANDQQQSADSKIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAMHQHKTGA 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+L A ++ V AL Y + +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 182 LLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGDSETIGKPQGSDLE 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
KPT P +L L + +
Sbjct: 242 LNKPTYPALL--------------------------------------GLEGAKLKLTKL 263
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++L +++ + L + DF ++R +
Sbjct: 264 HHEAIEALTIFNENA--EPLRALADFIVRRDH 293
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 130/332 (39%), Gaps = 54/332 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + + + + + + ++Y + +GGKR+RP L +A ++ +
Sbjct: 51 NYIADKNKAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVA 110
Query: 65 VLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ ACA+E IHT +L+HDD+ RRGK V+G + ++L GD LLS AF +
Sbjct: 111 MPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIG 170
Query: 123 ETKSQEAL------------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + + +VT E ++ KT
Sbjct: 171 RETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTG 230
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG + + L Y +G+AFQ+VDD+LD ++GK G+D
Sbjct: 231 ALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEA 290
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P ++ L +++ A
Sbjct: 291 VGKATYPSLV--------------------------------------GLEESKKIADDL 312
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK+ LR D L+ + DF R N
Sbjct: 313 ITEAKELLRDY-DPKLAAPLLGLADFIKNRQN 343
>gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa]
gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 149/324 (45%), Gaps = 30/324 (9%)
Query: 22 RICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYR-----------------GD 62
+ ++V + +Y G GKR RP + L A L R
Sbjct: 1 MVIAEVPKLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRK 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IH A+LLHDDV+DD+ RRG + LV GN+ +VL GDFLLS+A +
Sbjct: 61 RQQSIAEITEMIHVASLLHDDVLDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVALA 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
K+ E + L+ L GE Q++ + + E Y+ KTA L S + + +L
Sbjct: 121 SLKNTEVVTLLATAVEHLVNGETMQMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIAL 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG V YG NLG+A+QL+DDVLD+ G +GK D R+G T P++ A
Sbjct: 181 LAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAM 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
E S I+ G EN+ A + ++R + T A + A ++ LP
Sbjct: 241 -----EEFPQLCSVIDRGFDKPENIDAALEYLGKSRGIQRTRELAAKHANLAAAAIDSLP 295
Query: 303 DSS------WKKSLMEVVDFCLQR 320
++ +++L+++ + R
Sbjct: 296 ETDDEEVRKSRRALVDLTQRVITR 319
>gi|118379849|ref|XP_001023090.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|89304857|gb|EAS02845.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 465
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 10/303 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + + ++ GGKR+RP+ A ++ ++ + + ++
Sbjct: 163 LSEPIWEMLKRGGKRIRPIFCALIAEAYNHKLTIQKMIGNIFKMNYLIVQQIANLKSLKR 222
Query: 90 LRRGKVA-----ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+ V + L +T SQ +L ++
Sbjct: 223 REKDAVHIIYGVDISINAANYGYYAPLNYLLNLKKYNQKTISQLSLIYAYEMSQIHLGQG 282
Query: 145 LRQLSLSKNL----DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
L ++ TE+ YL ++ +KT LF + + ++ ++ + L +
Sbjct: 283 WDLLWHNQKKESLKIPTEQQYLQMVVNKTGALFRMMIRMLGVVLNLEERNVKMLSLFTEK 342
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G FQ+ DD+++ GED GK T+ I A T+ +K +
Sbjct: 343 VGAVFQIQDDIINLDSPDYTTKGKRGEDITEGKITVIAIHALNNNTEDKKQRLFEILCMK 402
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQ 319
+ +A IM+++ ++ + A ++A L LP+S K L + F L+
Sbjct: 403 TQDQTLVDEAIEIMQQSGSIQYAKELASQIMEQAWQELDKSLPESESKYKLKLICQFILK 462
Query: 320 RLN 322
R +
Sbjct: 463 RQS 465
>gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
Length = 323
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 6/316 (1%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ N + + + + +KY++ GGKR+RP L L + + + + ACA
Sbjct: 7 LNIFNEYLDNLQYARKPHTLYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSSACA 66
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D++A+RRG+ W T++L GD +L A+ + + +
Sbjct: 67 IETYHNYTLLHDDLMDNAAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCDGSKLK 126
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L T + EG+ + DVTE +Y+ +I+ KT+VL + +L++ +++AG
Sbjct: 127 EVIDLFTETALEIGEGQQLDMDFETRNDVTEAEYIEMIRLKTSVLLACSLKIGAILAGSS 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +G +G+AFQL DD LD G+ GK IG D K T +I AF + +
Sbjct: 187 AEDADYLYRFGEQIGLAFQLQDDFLDVYGDTKVFGKAIGGDILCNKKTYMLINAFNKADR 246
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLP-DSS 305
++ + + A + + E + Y +++K +R +
Sbjct: 247 NQRAELQRWFDAEDYVPAEKIAAVTALYNAIGIDKLAEEKIAYYFEQSKKYIRAVQVPEE 306
Query: 306 WKKSLMEVVDFCLQRL 321
K+ LM ++R
Sbjct: 307 RKQELMAYAQRMMKRK 322
>gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 328
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-----LEYRGD 62
K++EKV + +I D + + + +GGK LRP L +
Sbjct: 12 LAKNIEKVKHNLQDKISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDK 71
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++
Sbjct: 72 KLIDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLIT 131
Query: 123 ETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + S + GEL Q+ N T +YL + KTA LF A +
Sbjct: 132 DNVLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGA 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
G + G N+GI+FQ++DD+LD + + + K ED G +LP++L
Sbjct: 192 YFGGASSQTVSLATRIGQNIGISFQILDDILD-YSDASRLNKPTLEDLATGVYSLPLLLV 250
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +++ +++ ++ E + + A + KA + L
Sbjct: 251 ---LNEDSDELHTLLAKKQDLTLPEIQRIQALVVELGGVEKAKDLAAKFTNKALIDIDKL 307
Query: 302 PDS 304
PDS
Sbjct: 308 PDS 310
>gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 50/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ +++L + + V + + + + D + Y + +GGKRLRP+L L+ A +
Sbjct: 5 VSRMKELLRERGQMVEEELAVCLDGRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAAALCG 64
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A AIE IHT +L+H +DD LRRGK + + T++L GD LL+
Sbjct: 65 LPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLLTD 124
Query: 117 AFCMVIETKSQEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF M+ + ++ + G+ + + V+ ED + KT
Sbjct: 125 AFLMMCRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLRGIHAMKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ +++AG + A+ SYG LG+AFQ+ DD+LD + +GK +G D
Sbjct: 185 GALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGKPVGSDA 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T P ++ L + A
Sbjct: 245 AQGKKTYP----------------------------------ALL----GLDQSRALARE 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KAK +L L + D+ + R
Sbjct: 267 QAEKAKAALAGF-SGDEADFLRALADYTVTR 296
>gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi]
gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi]
Length = 394
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 84/351 (23%), Positives = 154/351 (43%), Gaps = 39/351 (11%)
Query: 4 LEDLTLKDMEKVNFLILKRI----CSDVEMI-------------PDVVKYLIFSGGKRLR 46
L ++ + I++ + + ++ ++ KY GGK R
Sbjct: 47 LPSFIRDKLKALQSEIMETLVRNAENSPSLLSTCFSSSAFTKTFQEMAKYYFDQGGKLFR 106
Query: 47 PMLTLATALMLEYRGDN--------------HVLLACAIEFIHTATLLHDDVVDDSALRR 92
P + L A +A E IHTA+L+HDDV+D + +RR
Sbjct: 107 PTICLLMARACNQFEPKSMLVDSGRDTVTRNQYKIAVISEMIHTASLVHDDVIDKADIRR 166
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G +WGN+ +VLVGDF+L++A ++ + ++ + L +GE Q++
Sbjct: 167 GSRTINALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFMQMNDGT 226
Query: 153 --NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
N Y+ SKTA LF+ + + +++++ V + + YG +LGIAFQ++DD
Sbjct: 227 DLNATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDD 286
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+LDY + GK D + G T PV+ A + + K +S +G +++ A
Sbjct: 287 LLDYVSTSSVTGKPTANDLKLGLATAPVLFAAEEYPELNKLITRSFSKEG-----DIELA 341
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
+ I+ + L T A + + A +R P+ + L+++ +R
Sbjct: 342 WEIVGNSTGLQKTRTAAREHAEHAVKMVRNFPNGDGVRDHLIQIALSQTER 392
>gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
Length = 298
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 16/295 (5%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LRP L +AT + + A A+E IH A L+HDDV D+S R +
Sbjct: 2 GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVEDNSECRHRMPTLQAEQ 61
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ---------LSLSK 152
G +V +GD + + + +V E + + L+
Sbjct: 62 GVPIAVNIGDAMNALSLRLVRENIPMLGHQLTQRIYEEFEHLMLKSLEGQASELGWVRDN 121
Query: 153 NLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
D+TE DYL +I +KT F + LIA +G +G AFQ+ DDV
Sbjct: 122 RCDITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQIQDDV 181
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN--FWKSTINDGKISVENLKK 269
L+ G+ ++ GK IG D GK TL ++ F++GT E++ G+ S E +
Sbjct: 182 LNLVGDSHQYGKEIGGDIWEGKRTLMLVHLFKQGTPSERDVLQAFMAKPRGERSEEEVSW 241
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCL----PDSSWKKSLMEVVDFCLQR 320
M++ ++ A+ + + A + P+S K + +++ + + R
Sbjct: 242 VIQRMQDYGSIDYAIAVAHQFAEAALEEFSVAYQDTPNSGEKAFIPKLIHYMISR 296
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ E V + + + ++ + + ++Y + +GGKR+RP+L LA A +
Sbjct: 21 DIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGGKRVRPILCLAAAEAVGS 80
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A A+E IHT +L+HDD+ +D+ LRRG + +G ++L GD LLS A
Sbjct: 81 DPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDGLLSFA 140
Query: 118 FCMVIETKSQEALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + + + G ++ + ++ + +
Sbjct: 141 FELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQQIHRH 200
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +AA++ ++ G + QAL YG G+AFQ+VDD+L+ + +GK G
Sbjct: 201 KTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTATLGKAAGS 260
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L TE +A
Sbjct: 261 DAARGKATYP----------------------------------ALL----GLEATEDKA 282
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +L + + L E+ + R
Sbjct: 283 REAVAAAVAALESFDHRA--EPLRELARYIHSRK 314
>gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
Length = 300
Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 124/336 (36%), Gaps = 55/336 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L D E+V + R+ + E + ++Y + GGKR+RP+LT AT +
Sbjct: 5 RSLSDFMRSSQERVERALDARLPAADRMPERLHQAMRYSVLGGGKRMRPLLTYATGQTIG 64
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D ACA+EFIH +L+H +DD LRRGK + T++L GD L +
Sbjct: 65 VAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDGLQAL 124
Query: 117 AFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ + S + + G+ L+ I+
Sbjct: 125 AFHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLENMHIR 184
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ ++ G+ L Y +G+AFQ+ DD+LD + +GK G
Sbjct: 185 KTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESDTQTLGKTRG 244
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D + KP P ++ L + +
Sbjct: 245 KDRDHNKPNYP----------------------------------ALL----GLSGAKEK 266
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + A +SL L E+ F +QR +
Sbjct: 267 AEEMHEAALESLAGF--GPEADLLRELARFIIQRQS 300
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K V + + + + + ++Y + +GGKRLRP+L LA ++
Sbjct: 25 DFSAYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDA 84
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LLS+AF
Sbjct: 85 SLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFE 144
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
MV E L V LA + + E + + KTA
Sbjct: 145 MVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAA 204
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +LI G + +A+++Y +G+AFQ+VDD+LD +GK G+D
Sbjct: 205 LLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLIA 264
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + RA
Sbjct: 265 DKTTYPKLL--------------------------------------GLEPSRARALELV 286
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK +L P +S + L+ + D+ R
Sbjct: 287 AQAKSALE--PWTSKAQPLLALADYVASR 313
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 124/332 (37%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ +VN + + + ++Y + +GGKR+RP L A A +
Sbjct: 4 ALQEFINDTSLQVNRCLEGWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVYAAARAVSV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A A+E IH +L+HDD+ +D+ LRRGK + + T++L GD L + A
Sbjct: 64 PNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILAGDGLQTLA 123
Query: 118 FCMVIETKSQEALEALSLV------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTA 170
F + + A+ + G++ + +L I KT
Sbjct: 124 FEKLSTIEDPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTISHLEKIHRHKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L AA+ + + Q+L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 184 ALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTATLGKRQGADLE 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T +L L + +A
Sbjct: 244 HEKATYVSLL--------------------------------------GLREAREKARDL 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A SL+ S+ L V D+ + R +
Sbjct: 266 HATALSSLQSFASSA--DPLRWVADYIVTRSH 295
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L D + V+ + + + + E I ++Y +F+GGKR+RP+L + A +
Sbjct: 7 DLRDYLAQQQRLVDSELDRLVPPESAAPETIHRAMRYSLFAGGKRIRPILCIEAARTVSD 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
AC++E IHT +L+HDD+ D+ RRGK+ V+G+ ++L GD LL+ A
Sbjct: 67 DCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTLA 126
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTA 170
F ++ + + +A + + A G + + + + + ++KT
Sbjct: 127 FQVLAQLDAPDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRAKTG 186
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+L + ++ AG +AL YG ++G+AFQ+VDD+LD +GK G+D
Sbjct: 187 ALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEALGKTAGKDAA 246
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P + L + A
Sbjct: 247 QHKITFPAVY--------------------------------------GLEPSREMAARE 268
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L + + + L E+ D ++R +
Sbjct: 269 CERAHAVLAPFGERALR--LHELADLIVRRKS 298
>gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae]
gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16]
Length = 392
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 40/352 (11%)
Query: 2 KMLEDLTLKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
++E L +D V L + S+ + + Y GGK LRP ++L
Sbjct: 48 DIMEQLIPQDASGAVENLADLNVTSN---LGRMTHYYFQQGGKMLRPTVSLLMGNACNSA 104
Query: 59 ------------------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
N + E IHTA+L+HDDV+D++ RRG
Sbjct: 105 MNRSIPEEQIAIPISERSAISSHLIVCQNQYKIGMIAEMIHTASLVHDDVIDEANTRRGS 164
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ VWGN+ SVLVGDF+L++A ++ + ++ + L GE Q+S++ +
Sbjct: 165 ASVNAVWGNKMSVLVGDFILARATQILCSIGKPNVIAVMASIIEDLVLGEFMQMSVTPSE 224
Query: 155 DVTEEDYLHVIKSKTAVLFSA----ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ + I+ S + L +++ Q YG NLGIAFQL DD
Sbjct: 225 ATPSQRMVAYIEKTHRKTASLFASSCRSTAILADSSNSNLHQTAYEYGRNLGIAFQLADD 284
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+LD+ +EMGK + D + G T PV+ A ++ + + ++G + ++A
Sbjct: 285 LLDFIATSDEMGKPVAADLKLGLATAPVLYACEQYPELTTMLLRKFKHEG-----DAERA 339
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQRL 321
I+ + + T +Y QKA + LP+ + + L+++ R
Sbjct: 340 RDIVMNSDGMDKTRQLIDAYSQKAVEMASSLPNRNESTEQLIKLALSQTDRK 391
>gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 360
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 71/342 (20%), Positives = 130/342 (38%), Gaps = 34/342 (9%)
Query: 13 EKVNFLILKRI----------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRG 61
++V+ + + + + + D V+ + GGKRLRP
Sbjct: 17 QRVDKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFAYWGYRGAGGIDT 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------------- 105
+ A+EF+ + L+HDD++D S RRG+ A L + +
Sbjct: 77 EQVATALAALEFVQASALIHDDLIDRSDTRRGEPAVHLRFTARHRSAGWDGDAAGFGDAA 136
Query: 106 SVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
++L+GD L + ++ A + + G+ + D + E
Sbjct: 137 AILLGDLCLVWSDELLHSAGLDPHTVARARPIFDQMRTEVTVGQYLDVLTQATGDTSVER 196
Query: 161 YLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
V + K+A L + + +A + A +YG+ LG AFQL DDVL G+
Sbjct: 197 AGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPLGEAFQLRDDVLGIFGDPA 256
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ GK G+D R GK T V A + + + D + + + ++ + A
Sbjct: 257 QTGKPAGDDLREGKRTYLVAAALETVGNAGREVLLDGLGDAGLDDAGVARLRELIGTSGA 316
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
L E R A +L + D+ ++L ++ +R
Sbjct: 317 LDRAEQRIRELTDTALAALSTVDLDTEAHQALADLAIAATRR 358
>gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
Length = 318
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 5/296 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ ++Y + SGGKRLRPML M + A AIE H TLLHDD++DDS
Sbjct: 21 LYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIEIFHNFTLLHDDLMDDSP 80
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELR 146
RR K + W T++L GD +L +A+ + + + + A + EG+
Sbjct: 81 TRRNKPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKYWAKVLPVFTQTALEVCEGQQF 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ +VT ++Y +I+ KTAVL + +L+ ++IA ++ + G+ +G+AFQ
Sbjct: 141 DMDFETKDNVTIDEYFRMIRLKTAVLLACSLKTGAIIADASERDQRLIYDLGIAIGMAFQ 200
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE- 265
L DD LD G +GK IG+D K T ++ A ++ ++ +N I+ +
Sbjct: 201 LKDDYLDTYGTFETLGKRIGDDILCRKKTFLLLTALNNADGNQREHLRTILNSTSIADDR 260
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
+ + I E Y +A L + K + +++ R
Sbjct: 261 KIAEVTEIYNRLNVAKICEEEINRYYCEAGKLLAEISVADEAKTDIRNLINKLKIR 316
>gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct]
Length = 296
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 122/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + + ++Y + +GGKR+RP+L A L AC
Sbjct: 11 ARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++L D L + AF ++ +T+
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRN 130
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A+ L + G+ L + A++ ++
Sbjct: 131 PQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 191 LGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A A +
Sbjct: 251 ----------------------------------ALL----GLEAAKGYALELRDLALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S+ L ++ + ++R N
Sbjct: 273 LDGFPPSA--DPLRQLARYIVERRN 295
>gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
Length = 296
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 134/332 (40%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + I S + D +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQNRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + S V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P + +L + +F + R +
Sbjct: 267 YQSALSELEKIPFN--TTALRALAEFVITRKS 296
>gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
Length = 295
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 122/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + + ++Y + +GGKR+RP+L A L AC
Sbjct: 11 ARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++L D L + AF ++ +T+
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRN 130
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A+ L + G+ L + A++ ++
Sbjct: 131 PQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 191 LGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A A +
Sbjct: 251 ----------------------------------ALL----GLEAAKGYALELRDLALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S+ L ++ + ++R N
Sbjct: 273 LDGFPPSA--DPLRQLARYIVERRN 295
>gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 335
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 141/325 (43%), Gaps = 12/325 (3%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D+ + + R E + ++ +Y + S GK LRP++ +A+A + +
Sbjct: 12 SSPVAADIRR---ALDARWSGGGEPLDEISRYALLSPGKLLRPLMLVASAEAVGGDREAV 68
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A+E++H A+L+HDD++D RRG+ + +G +++ GD L+ + F + E
Sbjct: 69 MPAALAVEYLHAASLVHDDIIDGDDTRRGRASVHARYGVADAIITGDALIIRLFGSLAEC 128
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIKSKTAVLFSA 175
+A ++ A +L + + + L V YL + KT LF
Sbjct: 129 PVPDADVLSAVRILARAGDDLCRGQMREALLVPPAPGALGSGLAAYLGMAALKTGALFRG 188
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++ G + + + G+AFQ+ DD+L + G+ GK D N +PT
Sbjct: 189 ACQAGAVLGGGTPGEVGIVAEFAEHTGLAFQMYDDLLPFLGDPAVTGKPDTSDVSNLRPT 248
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PV+LA + G E+ + + G L ++ AL A + AK
Sbjct: 249 FPVLLAHREGGPAERRRIERVLAGGLAPGAALAALREVVMATGALDLALAHAQEEVRLAK 308
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
L LP + L V + ++R
Sbjct: 309 SGLGVLPSAEAAGLLGAVAELAVRR 333
>gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 58/325 (17%)
Query: 13 EKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ VN + + + +++ ++Y + +GGKRLRP+L LA +L + + A
Sbjct: 12 DLVNAFLDNYVK-ENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCELLGGDINEVMPFA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
CAIE +HT +L+HDD+ +D+ RRGK+ +G ++L GD LL+ AF ++IE+ +
Sbjct: 71 CAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTA 130
Query: 127 QEALEALSLVAC-----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + S+N +V E ++ K KT L A
Sbjct: 131 TDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLEYMHKCKTGALIKA 190
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ S++I ++L++Y NLG+AFQ+ DD+LD G ++GK +G D N K T
Sbjct: 191 PVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKLGKKVGSDESNKKTT 250
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ L ++ ++A
Sbjct: 251 YVSLY--------------------------------------GLEKSKQMLRETTEEAI 272
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
++ ++ L E+ ++ + R
Sbjct: 273 KNIGKFGPNA--NFLRELAEYLIVR 295
>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
Length = 295
Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 122/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + + ++Y + +GGKR+RP+L A L AC
Sbjct: 11 ARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++L D L + AF ++ +T+
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRN 130
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A+ L + G+ L + A++ ++
Sbjct: 131 PQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 191 LGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A A +
Sbjct: 251 ----------------------------------ALL----GLEAAKGYALELRDLALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S+ L ++ + ++R N
Sbjct: 273 LDGFPPSA--DPLRQLARYIVERRN 295
>gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
Length = 297
Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 132/333 (39%), Gaps = 58/333 (17%)
Query: 8 TLKDMEKVNFLILKRICSDV-------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + + + D + Y + GGKR+RP L AT ML
Sbjct: 5 LSTDLTAIQQRINDFLATKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIYATGRMLGVS 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S AF
Sbjct: 65 LEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILAGDALQSFAF 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL------HVIKSKTAVL 172
++ + +S + + + R + L ++LD+ ED +I
Sbjct: 125 ELIAQDESLTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGA 184
Query: 173 FSAALEVSSLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A + + + +Q L+ Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 185 LIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETDKIGKTVGSDE 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + +A
Sbjct: 245 NLHKSTYPKLL--------------------------------------GLEGAKQKAQD 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A DSL LP +L E+ DF ++R +
Sbjct: 267 LYQLALDSLAKLP--FDTTALKELADFIVKRES 297
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + I + ++Y + +GGKR+RP+L++A +
Sbjct: 73 DFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHE 132
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD+ +D+ LRRGK V+G +VL GD +L+ A
Sbjct: 133 AVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAF 192
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ T+++ + L G++ + + ++ ED + +SKT
Sbjct: 193 HLVATETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKT 252
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L ++ + +++ G + + ++ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 253 AALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 312
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ + + +
Sbjct: 313 VADKTTYPKLI--------------------------------------GIEKSREFSDE 334
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A D L +S L+ + ++ R N
Sbjct: 335 LKREAIDQLAGF-NSDKTAPLIAMANYIANRDN 366
>gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 189
Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
E++QL + D TEE Y+ VI SKTA LF AA +V+++IA V A + YG LG
Sbjct: 12 EVQQLMNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVETAFQDYGRYLGT 71
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A + G ++ + I
Sbjct: 72 AFQLIDDVLDYVADGKEMGKNVGDDLAEGKPTLPLLYAMRHGNPQQAAMIREAIEQAN-G 130
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ L + MRE AL T+ RA KA +L LP+S+ K++L+ + +QR
Sbjct: 131 MDKLDEILTCMRETGALEYTQQRAEQEADKAIAALDILPESAHKQALIALAHLSVQR 187
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 113/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKRYALELRDQALTAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 SPFD--AAAEPLRELARYIVERRH 295
>gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
Length = 326
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYH 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 53/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
LE + + V + + + + + Y +F+GGKRLRP+L LA +
Sbjct: 5 ELESYLAERRQLVQEALARNLPPPDTYPPAVHQAMHYSLFAGGKRLRPILVLAAGEAVGS 64
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + + ACA+EFIHT +L+HDD+ +D+ RRG+ V+G ++L GD LL+ A
Sbjct: 65 QPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAGDALLTLA 124
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSKT 169
F ++ + E + LA Q + + E + ++ KT
Sbjct: 125 FEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVNYIHNHKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A L + ++ G L YG LG+AFQ+ DD+LD G+ ++ GK G D
Sbjct: 185 GSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTGKQGGVDA 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T P L + + +A
Sbjct: 245 ARGKATYPACL--------------------------------------GVEASRQKAGE 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A R L + L + F L+R
Sbjct: 267 LCAEAGALARAL--GPAAEPLELLAGFVLRRQ 296
>gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
Length = 365
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 71/333 (21%), Positives = 130/333 (39%), Gaps = 33/333 (9%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA---LMLEYRGDNHVLLACAIEFIHTATL 79
+ S V IP + + GGKRLR L L D+ L IEF+ + L
Sbjct: 33 VSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYWSRKWGYGSIDSVKYLMAGIEFLQSYLL 92
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSV-----LVGDFLLSQAFCMVIETKSQEALEA-- 132
+HDD++D+ +RRG + + + + +SQA + +S
Sbjct: 93 VHDDIMDEDEIRRGGPTVHVWFDKKCREGGLIGRCKHYGVSQAIIVGDYLESLAVSMFTR 152
Query: 133 --------------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ +A G+ + ++ +
Sbjct: 153 LNLPDYALKELIKTYTRGIRLVAYGQFLDVLIANTPLQKVSEDDVYNIHLLKTASYTVEL 212
Query: 179 VSSLIAGVQNSVRQAL----KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
L A + L Y + GIAFQL DD+L G+ GK +G D R K
Sbjct: 213 PLHLGAIASLMYDKELLTELSQYALPAGIAFQLQDDILGLYGDPKVTGKPVGSDVREKKK 272
Query: 235 TLPVILAFQRGTKREKNFWKSTINDG---KISVENLKKAFIIMRENRALVDTEYRAYSYG 291
TL ++ A+Q +K F + + +I+ E++++ I+RE +L + + Y
Sbjct: 273 TLLIVKAYQLADTGDKKFLEELYDKKKPEEITDEDVRRVQSIVRETGSLDYSVKKMNEYV 332
Query: 292 QKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
++A+++L + + S KK L +++ ++R +
Sbjct: 333 ERARNALKSSIIINESAKKVLDWLLELFVRRRH 365
>gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
Length = 326
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLQTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
F I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAP---HVFSPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 56/334 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + +L K + + I + + + + + Y +GGKRLRP+L + + +
Sbjct: 1 MDFISEL-KKKSDFIEAEIYAYLPLEEGYQKTLFSAMNYSYKAGGKRLRPILIMESYKLC 59
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+G ++ A AIE IHT +L+HDD+ D+ LRRGK V+G ++L GD LL+
Sbjct: 60 GGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDGLLN 119
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT------ 169
A+ +++ + + ++ AC + V E I
Sbjct: 120 YAYEVILNHALNSSDQPSAIKACKAIADGAGIYGMVGGQVVDVESESKEIDLACLDFIHL 179
Query: 170 ---AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A + A ++ + +AG + + L++YG LG+AFQ+ DD+LD G+ E+GKN+G
Sbjct: 180 NKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADDILDIEGDEKELGKNVG 239
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D N K T P IL + ++
Sbjct: 240 SDIENDKATYPHIL--------------------------------------GMERSKEI 261
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A KAK+ + + L+ + D+ + R
Sbjct: 262 ARDLVVKAKEKIEAF---EGAEFLVGLADYVISR 292
>gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
Length = 326
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 58/330 (17%)
Query: 11 DMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++++V I + I S + D +KY + GGKR+RP L AT ML
Sbjct: 8 ELKQVQDRINQFLANQFEEIDSYNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSA 67
Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A AIE IH +L+HDD+ +D+ LRRG+ + + T++L GD L + AF ++
Sbjct: 68 LDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEIL 127
Query: 122 IETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
E S A + L V L +S K +++ E + +H K+ +
Sbjct: 128 TEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLT 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ L + Q L+ Y +G+AFQ+ DD+LD G E+GK +G D
Sbjct: 188 AALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEGNSAEIGKPVGSDLDLD 247
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + +A
Sbjct: 248 KSTYPKLL--------------------------------------GLEGAKQKAQELYH 269
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L LP +L + +F + R +
Sbjct: 270 TALHELDNLP--FDTTALRALAEFIVNRKS 297
>gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
Length = 326
Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KT LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTGELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 85/336 (25%), Positives = 136/336 (40%), Gaps = 62/336 (18%)
Query: 8 TLKDMEKVNFLILKRICSDVE-------MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+++ + R+ S + + + Y + +GGKRLRP+L +A A L
Sbjct: 8 IEAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGS 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +ACA+E +HT +L+HDD+ D+ RRGK V+G ++L GD LL+ AF
Sbjct: 68 RDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTHAF 127
Query: 119 ---------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SK 168
V S +E LS A + + VT+ D L I K
Sbjct: 128 YSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHEHK 187
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L ++ IA +AL+ YG LG AFQ+ DD+LD G+ +++GK D
Sbjct: 188 TGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLGKKTQSD 247
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P + + +
Sbjct: 248 VIQQKVTYPYFI--------------------------------------GIEASRAEVE 269
Query: 289 SYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
+AK +L+ +P+ + L+E+ D L+R +
Sbjct: 270 RLTSEAKQALQNGAIPNP---QRLLEIADLLLRRDH 302
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/341 (22%), Positives = 133/341 (39%), Gaps = 60/341 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ VN + I +D + + ++Y + +GGKR+RP L LA ++ R
Sbjct: 65 DFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGGR 124
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E +HT +L+H +DD LRRGK +V+G +VL GD LLS +F
Sbjct: 125 EAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLSF 184
Query: 119 CMVIETKSQEALEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYL 162
+ S + ++ L ++ + + + L
Sbjct: 185 HHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLERL 244
Query: 163 HVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
I KTA L A++ + +++ G + ++L+ Y ++G+ FQ+VDD+LD E+
Sbjct: 245 EYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEEL 304
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D + K T P +L L
Sbjct: 305 GKTAGKDLASDKTTYPKLL--------------------------------------GLE 326
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A A++ L D L+ + ++ R N
Sbjct: 327 KSREFAEKLLSDAREQLSGF-DQETAAPLLHLANYIAYRQN 366
>gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8]
gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8]
gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
Length = 326
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGTVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 63/324 (19%), Positives = 113/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ +CA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGASCA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKRYALELRDQALTAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 STFD--AAAEPLRELARYIVERRH 295
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/341 (22%), Positives = 133/341 (39%), Gaps = 60/341 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ VN + I +D + + ++Y + +GGKR+RP L LA ++ R
Sbjct: 65 DFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGGR 124
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E +HT +L+H +DD LRRGK +V+G +VL GD LLS +F
Sbjct: 125 EAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLSF 184
Query: 119 CMVIETKSQEALEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYL 162
+ S + ++ L ++ + + + L
Sbjct: 185 HHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLERL 244
Query: 163 HVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
I KTA L A++ + +++ G + ++L+ Y ++G+ FQ+VDD+LD E+
Sbjct: 245 EYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEEL 304
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D + K T P +L L
Sbjct: 305 GKTAGKDLASDKTTYPKLL--------------------------------------GLE 326
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A A++ L D L+ + ++ R N
Sbjct: 327 KSREFAEKLLSDAREQLSGF-DQETAAPLLHLANYIAYRQN 366
>gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 298
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 131/337 (38%), Gaps = 58/337 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
+K + + +D ++ L +++ + + + ++Y GGKRLRP+L AT +
Sbjct: 5 LKTMMEQVAQD---IDRLFAEQLPVPEDPRRRLVEAMRYAAIGGGKRLRPLLVAATCALF 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + AIE IH +L+HDD +D+ LRRGK + + ++VL GD L +
Sbjct: 62 NVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN----------LDVTEEDYLHVI 165
AF ++ E K + LA + + + +
Sbjct: 122 LAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLPTITRLQ 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT LF LE +++ +R LK+Y ++G+AFQ+ DD++D G+ GK +
Sbjct: 182 QLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVAGKAV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D GK T +L L
Sbjct: 242 GKDAAAGKATFLSLL--------------------------------------GLEKARS 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + +A L S L + + + R +
Sbjct: 264 QAQALVDQAIAHLSVF--GSEADYLRSIARYIVARDH 298
>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 48/327 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M ++ + E +N + I + D ++Y + GGKR+RP+L + ++ +
Sbjct: 1 MTDIKIYLKQKAELINTYLKNLIPKGTPKELFDAMEYSLTVGGKRIRPILIIESSKAVNP 60
Query: 59 -YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + +A ++EFIHT +L+H +DD LRRGK V+G ++L GD LL+
Sbjct: 61 DVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLS--LSKNLDVTEEDYLHVIKSKTAVLF 173
AF ++ + + L ++ + + + ++ +D + KTA
Sbjct: 121 YAFELISGNQKITPDKLLKVINVISNSVGVYGMVGGQAGDILENFKDIDFIHTHKTAKFI 180
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
S +V ++AG + LK+YG+ +GIAFQ+ DD+LD G+ ++GK + +D K
Sbjct: 181 SGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEKVGKKLHKDKEKNK 240
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P + L ++ A Y +K
Sbjct: 241 ITYPSVY--------------------------------------GLDNSIKMAKDYVEK 262
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
AK ++ L + L+ + D+ + R
Sbjct: 263 AKQEVKYLKNP---DILISIADYIVSR 286
>gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 298
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
+K + + +D ++ L +++ + + + ++Y GGKRLRP+L +AT +
Sbjct: 5 LKTMMEQVAQD---IDRLFAEQLPVPEDPRRRLVEAMRYAAIGGGKRLRPLLVVATCALF 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + AIE IH +L+HDD +D+ LRRGK + + ++VL GD L +
Sbjct: 62 NVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN----------LDVTEEDYLHVI 165
AF ++ E K + L ++ + + +
Sbjct: 122 LAFEILSEEKIHTDPHVRLELIQALLSPPVKDGMVGGQAIDLAAETSTVPFDLPTITRLQ 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT LF LE +++ +R LK+Y ++G+AFQ+ DD++D G+ GK +
Sbjct: 182 QLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVAGKAV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D GK T +L L
Sbjct: 242 GKDAAAGKATFLSLL--------------------------------------GLEKARS 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + +A L S L + + + R +
Sbjct: 264 QAQALVDQAIAHLSVF--GSEADYLRSIARYIVARDH 298
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E +N + + I + I ++Y I +GGKR+RP+L LA ++ + ACA+
Sbjct: 90 ETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAV 149
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LL+ AF + E
Sbjct: 150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSK 209
Query: 130 LEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + + DV ED ++ KT L A+ +
Sbjct: 210 KMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIG 269
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 270 AVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI 329
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ + A++ L+
Sbjct: 330 --------------------------------------GVEKSKEFVEKLKRDAREHLQG 351
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS K L+ + +F R +
Sbjct: 352 F-DSDKVKPLIALTNFIANRNH 372
>gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4);
farnesyltranstransferase [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E +N + + I + I ++Y I +GGKR+RP+L LA ++ + ACA+
Sbjct: 90 ETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAV 149
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LL+ AF + E
Sbjct: 150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSK 209
Query: 130 LEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + + DV ED ++ KT L A+ +
Sbjct: 210 KMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIG 269
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 270 AVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI 329
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ ++ + A++ L+
Sbjct: 330 --------------------------------------GVEKSKEFVEKLKRDAREHLQG 351
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
DS K L+ + +F R +
Sbjct: 352 F-DSDKVKPLIALTNFIANRNH 372
>gi|148654322|ref|YP_001274527.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148566432|gb|ABQ88577.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 330
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 10/315 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK-RLRPMLTLATALMLEYRGD 62
L D D+ +V +I R+ + ++ + K RLR L + A + Y
Sbjct: 22 LPDDIAGDLAEVEQIITVRMNAR-PIVAQTANAAMRDADKLRLRAALVMLAARLGRYDTR 80
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A A E IH+AT +HD +++++A RRGK W +++ GD+LL+ A +
Sbjct: 81 RVVHAAAAAELIHSATTVHDSLINEAARRRGKPVGDQHWNGDVALMSGDYLLALAAAEMA 140
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ S V EG+L +++ LD + V +S+TA L AA V +
Sbjct: 141 LAPDARIIGMYSRVVMAFCEGKLAPVTVINPLDQALAQHEFVAESRTAALLEAAARVGVV 200
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+++ L +G LG+A + + DY G + G D R G+ TLP
Sbjct: 201 CGSGDDALGDLLGPFGRALGMALHIAIEARDYEMG----GSDAGRDLRAGRITLP---LI 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ I+ + + + +R + RA Y Q+A ++L LP
Sbjct: 254 YAAHAEGGAGLATVIDQHPLDARHAAEVIARVRR-DGVPPARARAQQYVQQAIETLTALP 312
Query: 303 DSSWKKSLMEVVDFC 317
+ + +L + D
Sbjct: 313 PGATRDALAALADRV 327
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 51/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ VN + + + I + ++Y + +GGKR+RP+L++A +
Sbjct: 73 DFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPILSIAACELFGGHE 132
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD+ +D+ LRRGK V+G +VL GD +L+ AF
Sbjct: 133 AVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFH 192
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+V S + + V LA+ ++ + + ++ +D + +SKTA
Sbjct: 193 LVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHRSKTA 252
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ + +++ G + + ++ Y +G+ FQ+VDD+LD E+GK G+D
Sbjct: 253 ALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 312
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P ++ + + +
Sbjct: 313 ADKTTYPKLI--------------------------------------GIEKSREFSDEL 334
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A D L +S L+ + ++ R N
Sbjct: 335 KREAVDQLAGF-NSDKAAPLIAMANYIANRDN 365
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 113/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKRYALELRDQALTAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 STFD--AAAEPLRELARYIVERRH 295
>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
Length = 295
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 123/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + + ++Y + +GGKR+RP+L A L AC
Sbjct: 11 ARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++L D L + AF ++ +T+
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRN 130
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A+ L + G+ L + A++ ++
Sbjct: 131 PQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 191 LGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A A +
Sbjct: 251 ----------------------------------ALL----GLEAAKGYALELRDLALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S+ L ++ + ++R N
Sbjct: 273 LDGFPPSA--DPLRQLARYIVERRN 295
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/338 (22%), Positives = 128/338 (37%), Gaps = 58/338 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ VN + + S + + + + +GGKRLRP+L LA
Sbjct: 17 DFKAYLKARQTLVNERLGAILGSLDPRRELTCAMGHSLMAGGKRLRPILCLAACEACSAP 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACA+E IHT +L+HDD+ +D+ LRRG +G T++L GD LL+ AF
Sbjct: 77 LEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAGDGLLTHAF 136
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY---------------LH 163
++ ++ + V L ++ ++ D
Sbjct: 137 QILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETVTSLELLTQ 196
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT + A++ ++ AG N++ ++L Y +G+AFQ+VDD+LD G+ MGK
Sbjct: 197 IHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVEGDPTVMGK 256
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G D N K T P + L +
Sbjct: 257 TAGSDVDNRKMTFPSFM--------------------------------------GLEAS 278
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +A +L + L + + LQR
Sbjct: 279 RKYAQEIINEAVKALDLFDEKK-TLPLKAIAAYILQRK 315
>gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 357
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 72/350 (20%), Positives = 129/350 (36%), Gaps = 38/350 (10%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ DL + + ++ + +++ + SGGKRLRP
Sbjct: 16 LTEFLDLQQQRLAEIGPELAEQV--------QAARDAT-SGGKRLRPSFCYWGFRAAGGD 66
Query: 61 GDNHV-LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT-------------- 105
+ + A ++E +H + L+HDDV+D S +RRG AA +
Sbjct: 67 PERPILTAAASLEMLHVSALVHDDVMDSSDVRRGAPAAHKRFEALQRARTEASGTGGDPV 126
Query: 106 ------SVLVGDFLLSQAFCMVIE--TKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
++L+GD L A M+ + A E Q
Sbjct: 127 GFGIGAAILLGDLCLIWADEMMHTSGFDAAALARASKFFDAVRVEVTAGQYLDLVAQASG 186
Query: 158 EEDYLHV----IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
E D L + + + G + AL +YG+ LG AFQL DD+L
Sbjct: 187 EADMDRALRVLRYKSATYTVERPLHIGAALGGGDQYLIDALSAYGLPLGEAFQLRDDLLG 246
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK G+D R GK T+ V A + + + + ++ + ++ I
Sbjct: 247 VFGDPGVTGKPAGDDLREGKRTVLVAYAAEHMSPVQLTEFDRLFGRAELDDDEIQLLREI 306
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRL 321
++++RA+ E + A +L + D + +K+L ++ R
Sbjct: 307 LQDSRAVQACEDLISERTEDALQALDRSPIEDEASRKALADLAIAATSRQ 356
>gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98]
gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98]
gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
Length = 326
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|224108643|ref|XP_002314919.1| predicted protein [Populus trichocarpa]
gi|222863959|gb|EEF01090.1| predicted protein [Populus trichocarpa]
Length = 383
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 86/347 (24%), Positives = 138/347 (39%), Gaps = 58/347 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYR--- 60
L ++ + + + ++V + +Y G GKR RP + L A L R
Sbjct: 61 SLVADELSVLANRLRSMVIAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRILE 120
Query: 61 ---------------------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
+A E IH A+LLHDDV+DD+ RRG +
Sbjct: 121 TTTSGVETTTRGVGDALTTELRKRQQSVAEITEMIHVASLLHDDVLDDADTRRGIGSLNF 180
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
V GN+ +VL GDFLLS+A + K+ E
Sbjct: 181 VMGNKVAVLAGDFLLSRACVALASLKNTEDDWCCYCSMEYY------------------- 221
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ KTA L S + + +L+AG V YG NLG+A+QL+DDVLD+ G
Sbjct: 222 --MQKTYYKTASLISNSCKAIALLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSA 279
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK D R+G T P++ A + + G EN+ A + ++R
Sbjct: 280 SLGKGSLSDIRHGIVTAPILFAMEEFPQLRSVIDW-----GFDKPENIDVALEYLGKSRG 334
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQR 320
+ T A + A ++ LP++ +++L+++ + R
Sbjct: 335 IQRTRELAAKHANLAAAAIDSLPETDDEEVRKSRRALVDLTQRVITR 381
>gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
Length = 324
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 89/293 (30%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 12 MEKVNFLI--LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+EK+N I L+ + S + + D + Y++ GGKR+RP+L L + + + A
Sbjct: 8 LEKINSHIADLRFVRS-PKGLYDPITYVLSMGGKRIRPVLMLMAYNLYKENVEPAFSSAT 66
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE H TLLHDD++D + RRGK VW + ++L GD +L A+ + + +
Sbjct: 67 GIEVYHNYTLLHDDLMDRADKRRGKETVHKVWNDNAAILSGDAMLVLAYQFMAQCPVKHL 126
Query: 130 LEALSLVA---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E + L + + EG+ + + DV EE+YL +I+ KT+VL +A+L++ +L+ G
Sbjct: 127 KEVMDLFSLTAFEICEGQQMDMEFEQRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGA 186
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L +GMN+G+AFQL DD+LD G+ GKNIG D K T +I A + +
Sbjct: 187 SADDAARLYDFGMNMGVAFQLKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALEHAS 246
Query: 247 KREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + I + E + + + E + Y +A DSL
Sbjct: 247 QEQASRLQHWITVVDFNPAEKITAVTDLYNQIGVKTLCENKITEYSNRAMDSL 299
>gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
Length = 298
Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLARPSGL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + I + I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+
Sbjct: 90 ESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAV 149
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LLS AF + +
Sbjct: 150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSE 209
Query: 130 LEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + +V E + KTAVL A +
Sbjct: 210 RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLG 269
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 270 AIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLTGKLTYPKLM 329
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ + A+ L+
Sbjct: 330 --------------------------------------GLEKSKEFVKRLTKDARQHLQG 351
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S L+ + F R
Sbjct: 352 F-SSEKVAPLVALTTFIANR 370
>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
Length = 296
Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 133/332 (40%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + I S + D +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQNRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + S V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P + +L + +F + R +
Sbjct: 267 YQSALSELEKIPFN--TTALRALAEFIITRKS 296
>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
Length = 296
Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 130/334 (38%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
K L +E+V I L R+ + + ++Y GGKRLRP L + +A +
Sbjct: 3 KTLTAAMADTVEQVEAAIDVLLPRVDLPEARLFEAMRYGCLGGGKRLRPFLVMESARLFG 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+EFIH +L+HDD+ LRRG+ L + T++L GD LL+
Sbjct: 63 VNPACALRAAAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILAGDALLTV 122
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSK 168
AF ++ + ++ E + + LA+ + + + + + + K
Sbjct: 123 AFEILADPETHEDAQVRCRLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAITRLQRLK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + + +++ AL++Y +LG+AFQ+ DD+LD G E GK++G D
Sbjct: 183 TGELIAFSATAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEGTEAETGKSVGRD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T IL + +A
Sbjct: 243 EGANKATFVSIL--------------------------------------GVERAREQAG 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L D + L +V + + R +
Sbjct: 265 RLADQAMAHLDIFEDRA--DMLKQVARYVVDRRS 296
>gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis
OG1RF]
Length = 326
Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFGPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
Length = 326
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPNVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa]
gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa]
Length = 370
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 39/348 (11%)
Query: 7 LTLKDMEKVNFLILKRI-----------------CSDVEMIPDVVKYLIFSGGKRLRPML 49
++ + I++ + + + ++ KY GGK RP +
Sbjct: 26 FVRDKLQALQSEIMEILVRNAENSSSLLSTCFSSSAFTKTFQEMAKYYFDQGGKLFRPTI 85
Query: 50 TLATALMLEYRGDN--------------HVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
L A +A E IHTA+L+HDDV+D + +RRG
Sbjct: 86 CLLMARACNQFEPKSMLVDSGRETVTRNQYKIAVISEMIHTASLVHDDVIDKADIRRGSR 145
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK--N 153
+WGN+ +VLVGDF+L++A ++ + ++ + L +GE Q++ N
Sbjct: 146 TVNALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFMQMNDGTDLN 205
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
Y+ SKTA LF+ + + +++++ V + + YG +LGIAFQ++DD+LD
Sbjct: 206 ATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDDLLD 265
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
Y + GK D + G T PV+ A + + K +S +G +++ A+ I
Sbjct: 266 YVSTSSVAGKPTANDLKLGLATAPVLFAAEEYPELNKLITRSFSKEG-----DVELAWEI 320
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
+ + L T A + + A +R P+ + L+ + +R
Sbjct: 321 VGNSTGLQKTRTAAREHAEHAVKMVRNFPNGDGVRDHLIRIALAQTER 368
>gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
Length = 326
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDRGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 51/318 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
KV + + + + + ++Y + +GGKRLRP+L LA+ + + A A+E
Sbjct: 21 KVEQALDSSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGDASLALPTATALE 80
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ +D+ LRRG+ V+G+ T++L GD LL++AF MV
Sbjct: 81 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPA 140
Query: 131 EALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E L V G S+ ++V + ++ KT L A++ +L
Sbjct: 141 ERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTGALLQASVLSGAL 200
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IAG +++ +AL++Y +G+AFQ++DD+LD +GK G+D K T P +L
Sbjct: 201 IAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLL-- 258
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L +++ RA S ++A L P
Sbjct: 259 ------------------------------------GLEESKARAESLVKEACGVLN--P 280
Query: 303 DSSWKKSLMEVVDFCLQR 320
S + L+ + + R
Sbjct: 281 WSDKAQPLLALAGYITSR 298
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATAL-MLE 58
+ D + E VN + + ++ + + ++Y GGKRLRP+LTL A +
Sbjct: 2 EINDFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFG 61
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A A+E +H +L+H +DD RRG++A V+G+ +VL GD LL+
Sbjct: 62 VEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTY 121
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT--------EEDYLHVIKSK 168
AF ++ + + E + V+ +A+G + + + D + + K
Sbjct: 122 AFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L AA+ +++ G AL Y N+G++FQ++DD+LD G+ ++GK +G D
Sbjct: 182 TGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEVGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P + L ++ A
Sbjct: 242 EGQDKATFPSVY--------------------------------------GLEESRAMAQ 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q AK+++ + L+++ D+ ++R
Sbjct: 264 KKVQAAKEAIERFE--EDAELLIQLADYIIER 293
>gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 337
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 89/322 (27%), Positives = 149/322 (46%), Gaps = 14/322 (4%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIF----------SGGKRLRPMLTLATALMLEYRGDN 63
V+ + K I V +Y GGK LRP L L +A + G
Sbjct: 15 AVDPELRKVIGKLDPDTRGVCEYHFGWTNADGSPNGGGGKALRPALVLLSAQAVAPNGAQ 74
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H +LLHDD++D RR + A V+G ++L GD LL A ++++
Sbjct: 75 AVPAAAAVELVHNFSLLHDDLLDGDTSRRHRPTAWTVFGRPAALLAGDALLGLATEVLLD 134
Query: 124 TKSQEAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S +A+ AL +L G+ L DVT ++ LH+ KT+ L + + +
Sbjct: 135 STSGDAIASARALCAAVRSLIAGQNADLDFEHRADVTLDECLHMADEKTSALLACSTSIG 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G + L ++G LG+AFQLVDD+L G+ GK + D R K T+P++
Sbjct: 195 ALHVGAPRETVERLHAFGSELGMAFQLVDDLLGLWGDPEVTGKPVLSDLRARKKTVPIVH 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299
A GT+ + + + ++ L++A ++R + T+ A L R
Sbjct: 255 ALTSGTEAGRRLGELYGKEEPLTEAELREAADMVRRAGSQQWTQDECERRLAAAHQHLPR 314
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
++ +SL E+ +F ++R
Sbjct: 315 ATGNAEAIESLTELAEFIVRRQ 336
>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 296
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + +++NF + K+ I S + + +KY + GGKR+RP L AT ML
Sbjct: 1 MYQFAQDLQESKQRINFFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKML 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A AIE IH +L+HDD+ LRRG + + + T++L GD L
Sbjct: 61 GANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQP 120
Query: 116 QAFCMVIETKS---------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ +T + L S V L +S ++ ++++ + +H K
Sbjct: 121 FAFELLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNK 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ + + + + + L Y +G+AFQ+ DD+LD GE +GK G
Sbjct: 181 TGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVIGKTAG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K T P ++ L + +
Sbjct: 241 SDLLADKSTYPKLI--------------------------------------GLDGAKQK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +A L LP +L + +F + R +
Sbjct: 263 ARELYHQALQELDALP--FDTSALHALAEFVVNRQS 296
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E + V + + + ++ + ++Y + +GGKR+RP+L LA+ +
Sbjct: 8 IPDFEKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A AIE IHT +L+HDD+ RRG+ V+G+ ++L GD LL++A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKT 169
F MV L V L+ + + E + + KT
Sbjct: 128 FEMVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ ++IAG + AL +Y +G+AFQ++DD+LD ++GK G+D
Sbjct: 188 GALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + +++ +A+
Sbjct: 248 LADKTTYPKLL--------------------------------------GMEESKKKAFD 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK ++ P K L+ + DF R
Sbjct: 270 LVDQAKKAIE--PWGLNAKYLISLADFITNR 298
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 53/316 (16%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + I + ++Y + +GGKR+RP+L +A ++ + AC+IE
Sbjct: 36 VNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVGGNESTAMAAACSIEM 95
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF + + S + E
Sbjct: 96 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAFAFEHIAVSTSGVSPE 155
Query: 132 ALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L G++ ++ D+ E + KTA L ++ V ++
Sbjct: 156 RIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLHKTAALLEGSVVVGAI 215
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G N + L+ + +G+ FQ+VDDVLD E+GK G+D K T P +L
Sbjct: 216 LGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTAGKDLVADKVTYPKLL-- 273
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A + A++ L
Sbjct: 274 ------------------------------------GIEKSNEFAQKLNRDAQEQLSGFD 297
Query: 303 DSSWKKS-LMEVVDFC 317
K + L+ + ++
Sbjct: 298 --PVKVAPLIALANYI 311
>gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 63/324 (19%), Positives = 116/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + ++E + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--AAAEPLRQLARYIVERRH 295
>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
Length = 296
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 133/332 (40%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D++ V I + S + D +KY + GGKR+RP L AT ML
Sbjct: 5 SEDLQHVQQRINHFLAEQFAHLDSAPAPLADAMKYGLLLGGKRIRPFLVYATGRMLGADL 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L + AF
Sbjct: 65 AQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAFAFE 124
Query: 120 MVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + + A + L+L+ L +S K + + E +++H+ K+
Sbjct: 125 ILTDIPTLSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEHIHLNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ + + + ++ Q L+ Y +G+AFQ+ DD+LD G+ +GK +G D
Sbjct: 185 LTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSETIGKTVGSDLT 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 ADKSTYPKLL--------------------------------------GLEGAKQKAQEL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A L+ LP +L + +F ++R N
Sbjct: 267 YEMALAELKDLP--FDTTALYALAEFIIKRKN 296
>gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153]
Length = 298
Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGTVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLARPSGL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183]
gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183]
Length = 353
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 121/310 (39%), Gaps = 33/310 (10%)
Query: 41 GGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
GGKRLRP A ++E + + L+HDDV+D S RRG+ +
Sbjct: 45 GGKRLRPAFCYWGWRAAGGEDIEAATGIAAAAASLELLQASALIHDDVMDASDTRRGQPS 104
Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
A + ++ A + L+ A L +L + V
Sbjct: 105 AHRRFE---AMHREHGWRGGAAAFGEGSAILLGDLCLAWSAEMFDTSGLDTEALRRGRPV 161
Query: 157 TEEDYLHVIKSKTA-------------------------VLFSAALEVSSLIAGVQNSVR 191
+ VI + L + + +AG V
Sbjct: 162 FDLMRTEVICGQYLDMLESARGAGTVERALTVVEFKSAKYTIERPLHMGAELAGGTPEVV 221
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL++YG LGIAFQL DDVL G+ E GK G+D R GK T+ V +R T E
Sbjct: 222 EALRAYGRPLGIAFQLRDDVLGVFGDPAETGKPAGDDLREGKRTVLVAFTLERATPAEAE 281
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
F +S + D ++ E + + I+ + AL E Y ++A ++LR P S +++L
Sbjct: 282 FIESRLGDPELDAEGIAQLRSIIDGSGALAACEELIDRYTEQAYEALRSAPIASDARQAL 341
Query: 311 MEVVDFCLQR 320
E+ R
Sbjct: 342 AELAVAATAR 351
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 131/321 (40%), Gaps = 51/321 (15%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + + + + ++Y + +GGKRLRP+L L + M D + ACA+
Sbjct: 15 SQVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMSGGSADLAMPTACAL 74
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD RRGK+ V+G ++L GD LL+ AF ++ E
Sbjct: 75 EMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLAYAFQLIAEKTVGAQ 134
Query: 130 LEALSLVACTLAEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + V L + S+ +T E ++ KT L ++ +
Sbjct: 135 PERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIHTHKTGALLEVSVISGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG V + L Y +G+AFQ+ DD+LD E+GK G+D R+ K T P +L
Sbjct: 195 ILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGKTAGKDLRDRKATYPSLL- 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
RA ++A L
Sbjct: 254 -------------------------------------GYDGARDRAEQLREQAVAELADF 276
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
S+ + L + +F +QR +
Sbjct: 277 GASA--RPLTALAEFIVQRRH 295
>gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336]
gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336]
Length = 296
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + +++NF + K+ I S + + +KY + GGKR+RP L AT ML
Sbjct: 1 MYQFAQDLQESKQRINFFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKML 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A AIE IH +L+HDD+ LRRG + + + T++L GD L
Sbjct: 61 GANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQP 120
Query: 116 QAFCMVIETKS---------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ +T + L S V L +S ++ ++++ + +H K
Sbjct: 121 FAFELLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNK 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ + + + + + L Y +G+AFQ+ DD+LD GE +GK G
Sbjct: 181 TGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVIGKTAG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K T P ++ L + +
Sbjct: 241 SDLLADKSTYPKLI--------------------------------------GLDGAKQK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +A L LP +L + +F + R +
Sbjct: 263 AQELYHQALQELDALP--FDTSALHALAEFVVNRQS 296
>gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2);
farnesyltranstransferase [Arabidopsis thaliana]
gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP
synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 2; AltName:
Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + I + I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+
Sbjct: 94 ESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAV 153
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LLS AF + +
Sbjct: 154 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSE 213
Query: 130 LEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + +V E + KTAVL A +
Sbjct: 214 RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLG 273
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 274 AIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI 333
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ + A+ L+
Sbjct: 334 --------------------------------------GLEKSKEFVKRLTKDARQHLQG 355
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S L+ + F R
Sbjct: 356 F-SSEKVAPLVALTTFIANR 374
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + I + I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+
Sbjct: 91 ESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAV 150
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LLS AF + +
Sbjct: 151 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSE 210
Query: 130 LEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + +V E + KTAVL A +
Sbjct: 211 RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLG 270
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 271 AIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI 330
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ + A+ L+
Sbjct: 331 --------------------------------------GLEKSKEFVKRLTKDARQHLQG 352
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S L+ + F R
Sbjct: 353 F-SSEKVAPLVALTTFIANR 371
>gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 346
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKR+RP++ + D V A +IE +H TL+HDDV D S RR + +W
Sbjct: 57 GKRIRPLICVLACAAAGGDPDVAVPTAASIELLHNFTLVHDDVQDGSDRRRHRPTVWALW 116
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALE--------ALSLVACTLAEGELRQLSLSKN 153
G ++ GD L + + ++ + ++ + + EG++ L +
Sbjct: 117 GVGQAINAGDALFALSQLPLLGSHARGVPPARVIGVAREFNATVLRIVEGQVLDLCFEER 176
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
++ YL++I+ KTA L + A +++AG + +++G LG+ FQ+ DD+L
Sbjct: 177 WEIPVASYLNMIEGKTASLVAFAAWSGAVLAGADAERAERYRAFGRALGLGFQVQDDLLG 236
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
GE GK G+D R K +LPV+L + + + ++ ++ ++ +
Sbjct: 237 IWGEAEVTGKPAGDDIRRRKKSLPVLLLASKADAEDLSTLQTIYAGPEVDDAAVETVLRL 296
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQR 320
+ + + + Y +A L ++ L E+ + R
Sbjct: 297 LEKYDVQSEVQVAVAEYHAEALRLLEEAGATGPARERLNELAERLATR 344
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 79/330 (23%), Positives = 128/330 (38%), Gaps = 55/330 (16%)
Query: 8 TLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
V + + + + I + Y +F+GGKRLRP+L L +A ++
Sbjct: 12 LADKKAYVEKFMREFMPPENAYPQVIHRAMHYAVFNGGKRLRPILVLESAQVVGKDLTRA 71
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +ACA+E IH+ +L+H +DD LRRGK V+G ++L GD LL+ AF ++
Sbjct: 72 LPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDALLTLAFEIMT 131
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVIKSKTAVL 172
+E + + D + KT L
Sbjct: 132 ACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKDTDFFTLKTLHSKKTGAL 191
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F A L +L+ GV++ QAL Y N G+AFQ+ DD+LD G+ GK +G D +
Sbjct: 192 FRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGDEKITGKPVGSDEKKQ 251
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L + + + A S +
Sbjct: 252 KVTYPSLL--------------------------------------GMDEAKKLAKSSVE 273
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +SL + L + + L R +
Sbjct: 274 EAVESLNVF--GAEADFLRNLALYLLHRRS 301
>gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 352
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 11/302 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + + L+ GGKR RP L L + L + + LA IE +H +L+ DD+ D +
Sbjct: 51 IFEPMWDLLSRGGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIEDGAE 110
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---------LSLVACTL 140
+RRG A + +G +V + + +++E E + +
Sbjct: 111 VRRGDKAIHIKYGLDIAVNLSSAMYFLPLRILMEMNVDELKYRRLVNAYLEDMIRIHIGQ 170
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
A L V E YL + +KT VL A +++ A + + + + +
Sbjct: 171 ATDIGWHRGLRDPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAES 230
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ+ DD+L+ +GK GED R GK TL VI+ R + E+ K ++
Sbjct: 231 IGVAFQIQDDILN-LRSAENLGKEFGEDIREGKITLMVIVTLSRAGEEERRRLKEILSMH 289
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQ 319
E +K+A IM A+ A + + + LP++ +K + E+ +F ++
Sbjct: 290 TSDRELIKEAISIMERQGAIDYARDVARKIVMDSWEDIRDLLPENIYKDKIRELANFLIE 349
Query: 320 RL 321
R
Sbjct: 350 RS 351
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++D + V+ + + + + + ++Y + +GGKR+RP+LT+A A +
Sbjct: 32 NIKDYLEQKRLAVDCFLDQVSPPTATPPTTLHESMRYSLMAGGKRVRPILTIAAAEAIGA 91
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +AC++EFIHT +L+HDD+ RRGK V+G ++L GD LL+ A
Sbjct: 92 TPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILAGDALLTMA 151
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLS----------LSKNLDVTEEDYLHVIKS 167
F ++ + + E V ++N D+ ++ K
Sbjct: 152 FDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLPTLQNIHKH 211
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT +L AA+ + ++ AG + + Y ++G+AFQ+ DDVL+ G E+GKN
Sbjct: 212 KTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNVTGTREELGKNPNT 271
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P + A
Sbjct: 272 DAERGKKTYPTFY--------------------------------------GVEGARKLA 293
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L S+ L E+ + R N
Sbjct: 294 DDCVTRAIGRLNTFGPSA--DPLREIARYITARKN 326
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
Length = 367
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 76/330 (23%), Positives = 128/330 (38%), Gaps = 60/330 (18%)
Query: 14 KVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
VN + + + + D ++Y + +GGKR+RP L LA ++ + A A+
Sbjct: 77 AVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEPWAMPAAAAV 136
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD LRRGK +V+G +VL GD LLS +F + S
Sbjct: 137 EMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPP 196
Query: 130 LEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYLHVIK-SKTAVL 172
+ ++ L ++ + + L I KTA L
Sbjct: 197 DVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPLERLEYIHLHKTAAL 256
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ + ++I G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D +
Sbjct: 257 LEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASD 316
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + A
Sbjct: 317 KTTYPKLL--------------------------------------GLEKSREFAEELLS 338
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + L C D L+ + ++ R N
Sbjct: 339 DAVEQLACF-DKEKAAPLLHLANYIAHRQN 367
>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
Length = 299
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 124/333 (37%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ +V + + + ++Y + +GGKRLRP+L L+TA M
Sbjct: 6 DLKARLRMQAARVEGYLATCLAGRGIPPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLD 65
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A AIE IHT +L+H +DD LRRG+ + + T++L GD LL+ AF
Sbjct: 66 PMSVMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAF 125
Query: 119 CMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + + G+ + + D+ + KT
Sbjct: 126 DLMASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKT 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + +L+ G S + + YG +G AFQ+VDD+LD G+ ++GK +G D
Sbjct: 186 GALIRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEAQLGKPVGSDV 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T P +L + + A
Sbjct: 246 EQGKVTYPSLL--------------------------------------GIERSRALAQE 267
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L + L + + + R++
Sbjct: 268 QADIAVTCLADF-EGEDADFLRALAQYIVDRVS 299
>gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1]
gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1]
Length = 318
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 12/309 (3%)
Query: 15 VNFLILKRICSDVEMIPD--VVKYLIF---SGGKRLRPMLTLATALM-LEYRGDNHVLLA 68
N L+LK + SD + D ++ L+ +GGKR+RP+ L A + A
Sbjct: 14 FNDLLLKAVSSDSTLFSDPKMMNDLLQIIMNGGKRIRPLFVLLAADLKENVNKQEIYTAA 73
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
AIE +H A+L+HDD++D+S R + V +G+F+L+++ + E K +
Sbjct: 74 VAIELMHVASLIHDDIIDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSEFKIPK 133
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ +++V L GEL Q N D++ +DY++ KT L S +L V L+AG+
Sbjct: 134 LHQEIAVVMNNLCLGELNQQHNHFNFDLSFDDYINKSYQKTGALISLSLVVGGLVAGLDA 193
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
++ L + G +GIA+QL DD+LD+ ++GK +G D RNG TLP +
Sbjct: 194 NIINQLSTIGSQIGIAYQLKDDILDFTSTSKKIGKPVGYDLRNGIITLP----TIFALED 249
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ + ++ + + + Y +K+ + LP K
Sbjct: 250 SLLKDDLLSLNVETEKSKFDLLCEQIKNSEHIQRANDICFKYINSSKNLINELP--LQKN 307
Query: 309 SLMEVVDFC 317
+ +++
Sbjct: 308 QFLNLINLI 316
>gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase
[Gordonibacter pamelaeae 7-10-1-b]
Length = 349
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 12/302 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + + +GGKR RP++ A + A AIE HTA L+HDD+ D++
Sbjct: 49 LYEPLNAYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIADEAE 108
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEG 143
LRRG+ L G ++ +GD LS VI + L + EG
Sbjct: 109 LRRGEPCLHLTEGMGLAINMGDLALSLVNGTVINDPLLDDATKVRVVNELIEMTRRTIEG 168
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---AALEVSSLIAGVQNSVRQALKSYGMN 200
+ + +++ +++ + L + ++I G + +AL++YG++
Sbjct: 169 QALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEAEIEALRNYGLD 228
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
G+AFQ+ DD+L+ G K+ D GK TL V+ A Q R + ++
Sbjct: 229 TGLAFQIQDDLLNLIGSEESTKKDFRNDITEGKRTLMVVHALQHSDDR--DRLIDILSSK 286
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQ 319
+ L +A IM + ++ A + AK+ L + SS ++ L+ + D+ +
Sbjct: 287 EKDQAVLAEAVDIMETSGSIEYARNYAENLTSIAKNRLVDMVRPSSSRELLISMADWFVN 346
Query: 320 RL 321
RL
Sbjct: 347 RL 348
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 132/330 (40%), Gaps = 58/330 (17%)
Query: 11 DMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++++V I + I S + D +KY + GGKR+RP L AT ML
Sbjct: 8 ELKQVQDRINQFLANQFEEIDSYNAHLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSA 67
Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A AIE IH +L+HDD+ +D+ LRRG+ + + T++L GD L + AF ++
Sbjct: 68 LDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEIL 127
Query: 122 IETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
E S A + L V L +S K +++ E + +H K+ +
Sbjct: 128 TEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLT 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ L + Q L+ Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 188 AALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSAEIGKPVGSDLGLD 247
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + +A Q
Sbjct: 248 KSTYPKLL--------------------------------------GLEGAKQKAQELYQ 269
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L LP +L + +F + R +
Sbjct: 270 TALHELDNLP--FDTTALRALAEFIVNRKS 297
>gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 339
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 133/333 (39%), Gaps = 27/333 (8%)
Query: 16 NFLILKRICS-------DVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALML 57
+ I + + S V M ++ +Y + GK LRP L +
Sbjct: 6 DESIRQAMQSAFPPADARVTMFYEMQEYHLGWRNAQLEPTQADSGKLLRPRFCLLACAAV 65
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
LA AI+ +H +L+HDD+ D S RRG+ +W ++ VGD + + A
Sbjct: 66 GGDPQQAEPLAAAIQLLHDFSLIHDDIEDHSPTRRGRETVWKLWEVPQAINVGDGMFTLA 125
Query: 118 F--------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
V + E + L EG+ +S + LD++E DYL +I KT
Sbjct: 126 QLSLFRLAEVGVESSVVVEIARRFNQTIIRLCEGQYLDMSFEQRLDISEGDYLAMISRKT 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L +AA + +++ AL ++G LG+AFQ+ DD+L G GK D
Sbjct: 186 AALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIEDDMLGIWGAEAVTGKPDAHDI 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LP+I A + + + +++ I+ + T A
Sbjct: 246 WGRKKSLPIIHALAHADAEDGGKLAAIYQKEPLEASDIQIVLTILERTGSQGYTAGVAKF 305
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRL 321
Y ++A +L L ++ L + L R+
Sbjct: 306 YHEQALAALADLQGEAEPIAELHALTKQLLGRV 338
>gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1]
gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1]
Length = 364
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 31/332 (9%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLACAIEFIHT 76
++ + DVE + + L+ +GGKRLR ++ + + CA+E
Sbjct: 32 LMATVSPDVEPLIGSISNLV-TGGKRLRALMCYWGWRGAGGPAGDPDIITAGCALELFQA 90
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVL----------------VGDFLLSQAFCM 120
A L+HDD++D S RRG + + + GD LS +
Sbjct: 91 AALIHDDIIDRSDTRRGGPSVHKRFNQLHEMNGWALDSGRFGDAAAILTGDLCLSFSEES 150
Query: 121 VIETKSQ---------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--KSKT 169
E + + V L +++ + I
Sbjct: 151 FTEIGHRAAAGSPARRIFNVMRAEVMAGQYLDILEEVAGPVRDRAGSVERAKSIIRYKSA 210
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + +AG + + + + LG AFQ+ DDVL G+ GK G+D
Sbjct: 211 KYSTEHPLALGGALAGAPEGLLKGYSEFSLPLGEAFQMRDDVLGVFGDPETTGKPAGDDL 270
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R GK T+ V A + E ++ + + + + + ++ E AL TE
Sbjct: 271 REGKRTVLVGFAINQAPPAEADYLDRMLGNPGLGEVEVAEIRRVIVECGALDATESLIAE 330
Query: 290 YGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
+A ++L LP +L ++ + + R
Sbjct: 331 LSNRAFEALERLPLEDLPLVALRQLAEAAVSR 362
>gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 235
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 134/233 (57%), Gaps = 1/233 (0%)
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S +RRGK A +GN SVLVGDF+ ++AF M+ S + LE +S +AEGE+ Q
Sbjct: 2 SDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQ 61
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
L + D+TEE+Y+ VI SKTA LF AA + S ++AG + L+ YG LG AFQL
Sbjct: 62 LMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQL 121
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
+DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I G L
Sbjct: 122 IDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAIEQGN-GRHLL 180
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ M +L T RA KA +L+ LPD+ W+++L+ + +QR
Sbjct: 181 EPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQR 233
>gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 116
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 69/113 (61%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL
Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLY 116
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + I + ++Y + +GGKR+RPM+ +A ++ N + ACA+E
Sbjct: 82 VNEALDASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEM 141
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ RRGK + V+G + +VL GD LLS +F + + +
Sbjct: 142 IHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKD 201
Query: 132 ALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA + ++ + DV + ++ KTA+L +++ + +++
Sbjct: 202 RIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIM 261
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + + L+ + ++G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 262 GGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGKTAGKDLLTDKTTYPKLL--- 318
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + A ++A++ L
Sbjct: 319 -----------------------------------GIEKSREFAEKLNKEAQEQLSGFDR 343
Query: 304 SSWKKSLMEVVDFCLQRLN 322
L+ + ++ R N
Sbjct: 344 RKA-APLIALANYNAYRQN 361
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 54/321 (16%)
Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ I + ++ D V Y + +GGKRLRP+L +A+ + +N V A AIE
Sbjct: 16 IEEFIKSYFQTFPTPPILHDSVLYSLTAGGKRLRPILCIASYEACDGM-ENIVPYATAIE 74
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
FIHT +L+HDD+ +D+ LRRGK V+G ++L GD LL++AF ++
Sbjct: 75 FIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANIS 134
Query: 131 EALSLVACT--------LAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSS 181
L + + L +E + I KTA + A+++V +
Sbjct: 135 SNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + L+ YG ++G+AFQ+VDD+LD G MGK G D GK T P +
Sbjct: 195 ILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVF- 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++ +A KA +SL
Sbjct: 254 -------------------------------------GIEKSKQKAKELIDKALESLTMF 276
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 277 NHKA--EPLREIAHYIIKRTS 295
>gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
Length = 362
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 64/341 (18%), Positives = 117/341 (34%), Gaps = 30/341 (8%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ V L I D + D + L+ +GGKR+R +L + +
Sbjct: 22 QEFLAVKRNELAEISVDAPALIDTISGLV-TGGKRMRALLCYWGWRGAGGNPETSSPITT 80
Query: 70 AI---EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--------------------- 105
A E A L+HDD++D S +RRG + +
Sbjct: 81 AGAALELFQAAALIHDDIIDRSDIRRGAPSVHRQFSQLHQRQRWALDPERFGHAAAILAG 140
Query: 106 --SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ + + S + + V L +++ +
Sbjct: 141 DLCLSFSEEVFSSINVPAPQKARSVFNTMRAEVMAGQYLDILEEVAGPSRGPENAVERAQ 200
Query: 164 VI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
I L + +AG ++ ++ + LG AFQL DD+L G+
Sbjct: 201 SIIRYKSAKYSSEHPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDMLGVFGDPATT 260
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D R GK T+ + + + +F + + ++++ IM A+
Sbjct: 261 GKPAGDDLREGKRTVLIGYTLRLADSDQADFVDQRLGIPDLGEADIEQIRSIMVGCGAVA 320
Query: 282 DTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
TE Y A ++L LP D + +L + +QR
Sbjct: 321 ATEDLIGRYSDTAFEALDSLPIDENTMLALRSMAQAAVQRS 361
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 83/329 (25%), Positives = 134/329 (40%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K V + + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 19 DFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDA 78
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+H +DD LRRG+ V+G ++L GD LL++AF
Sbjct: 79 AQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFE 138
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV E L V G S+ +V E ++ KT
Sbjct: 139 MVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGA 198
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L SA + ++I G + + AL+ Y +G+AFQ++DD+LD +GK G+D
Sbjct: 199 LLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIA 258
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA
Sbjct: 259 DKTTYPKLL--------------------------------------GLEESRKRAADLV 280
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+AK L+ P +S + L+ + D+ R
Sbjct: 281 QEAKGVLK--PWASKAQPLLALADYITSR 307
>gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14]
gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14]
gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013]
Length = 298
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 125/322 (38%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGVVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + + T++LVGD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 287
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 122/323 (37%), Gaps = 52/323 (16%)
Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V + + + ++Y + +GGKRLRP+L L+TA M + + A A
Sbjct: 4 ARVEGYLATCLAGRGIPPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAA 63
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+H +DD LRRG+ + + T++L GD LL+ AF ++
Sbjct: 64 IELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGI 123
Query: 129 ALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + G+ + + D+ + KT L +
Sbjct: 124 PAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVA 183
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L+ G S + + YG +G AFQ+VDD+LD G+ ++GK +G D GK T P +
Sbjct: 184 GALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSL 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + A A L
Sbjct: 244 L--------------------------------------GIERSRALAQEQADIAVTCLA 265
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ L + + + R++
Sbjct: 266 DF-EGEDADFLRALAQYIVDRVS 287
>gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642]
gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642]
Length = 301
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 41/306 (13%)
Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + + + +V I +K+LI +GGKR RP++ L +A + + +A A+E
Sbjct: 11 IERALKELLDREVIIPKIKKALKHLIEAGGKRTRPIIVLLSAKLAGGDEKEILDMALAVE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L HDDV+D RR K + + + ++LVGD+L+S++ + + +
Sbjct: 71 LIHTASLAHDDVIDRGVKRRNKETLNVKYDDSLAILVGDWLISKSVQLTAKYGYDIVRDF 130
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L S + EEDY I+ KTA LF+ + + + Q+ +
Sbjct: 131 AKTGMLMSEGEVLDVYSTKEKF--DEEDYFKCIEYKTAALFAYSAKNAYQYFS-QDEGVE 187
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L YG+NLGIA+QLVDD+L+Y + + TLP+I + G +
Sbjct: 188 KLFQYGLNLGIAYQLVDDLLEYLS------LYGDKSSKIESRTLPMIYEEKFGVE----- 236
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+A+ Y QK+K +L D K L+
Sbjct: 237 -------------------------KAVKKVMDLIVDYSQKSKKALEFFEDGVVKSKLLR 271
Query: 313 VVDFCL 318
+VDF
Sbjct: 272 LVDFMT 277
>gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155]
gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155]
Length = 293
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 126/331 (38%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + ++V+ + +R+ + + + Y GGKR+RP L + M
Sbjct: 1 MLVSAIQEYQQRVDNQLKQRLSTLEHTAPQLKAAMTYGALLGGKRIRPFLVYSVGRMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 ELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A A+ + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAQDTAKQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
Length = 296
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 66/325 (20%), Positives = 114/325 (35%), Gaps = 56/325 (17%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---------- 118
+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L A + A G+ L A++ ++
Sbjct: 132 RDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 LGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 252 ----------------------------------ALL----GLEAAKRYALELRDQALTA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + + L E+ + ++R +
Sbjct: 274 LSTFD--AAAEPLRELARYIVERRH 296
>gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 296
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 131/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D++ V I I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SQDLQHVQQRINHFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADM 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE IH +L+HDD+ LRRG + + T++L GD L + AF
Sbjct: 65 AHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFE 124
Query: 120 MVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + A + L L+ L +S K + + E + +H+ K+
Sbjct: 125 ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ + + ++ Q L+ Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 185 LTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTGSDLT 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 ADKSTYPKLL--------------------------------------GLEGAKQKALEL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L+ LP + +L + +F ++R +
Sbjct: 267 YERALTELKNLPFN--TTALYALAEFIVKRKS 296
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 52/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + ++ + + + I ++Y +F+GGKRLRP LTLA A +
Sbjct: 2 ELKSYLTARGKLIDQALDRFLPRASVKPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVG 110
+ ACA+E IHT +L+HDD+ + + +
Sbjct: 62 EVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLTIA 121
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+L+QA E G + ++ + ++ + KTA
Sbjct: 122 FEILAQAKETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHRCKTA 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L +A++ + + A + + L +G +LG+AFQ++DD+LD ++GK G+D
Sbjct: 182 ALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGKDVA 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P I L + A+
Sbjct: 242 ATKATYPAIF--------------------------------------GLERSREEAHRL 263
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L+ S L D+ L R
Sbjct: 264 TLAAHAALKPFGKSGAT--LRAFADYLLVR 291
>gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens]
Length = 439
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 22/331 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTLATALMLEYRGD-- 62
L ++ + + + ++ ++ GKR RP + A L
Sbjct: 113 ALCRDELTPFSDNVKALVETENPVLSQAATMFFEQRHGKRFRPTIVALMAKALPVVHARD 172
Query: 63 -------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
L E IH A+L+HDDV+DD+ RRG A ++ N+ +VL GD+LL+
Sbjct: 173 DAETCKAKQDRLGQITEMIHVASLIHDDVLDDADTRRGGDAIHKMYSNKVAVLSGDYLLA 232
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A ++ + ++ +E ++ +L + +Q S+ ++ ++ S
Sbjct: 233 RASVLLARLQHKQVVEVMAKALDSLLGKDGKQK-KSEIAARDAKEMELYLRKSYYKTASL 291
Query: 176 ALEVSSLI-----AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ S ++ +A + YG +LG+AFQ+VDDVLD+ + +++GK G D
Sbjct: 292 ICDASKSCALLAGHDFDSATARAAEEYGYHLGLAFQIVDDVLDFVVDSDDLGKPAGADLS 351
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G T P++ A Q + I+ ++ +A+ +R +R L + A+ +
Sbjct: 352 LGLATAPILYAAQDLPELRP-----LIDRRFKGDGDVTRAYETVRASRGLELSRKLAHFH 406
Query: 291 GQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
Q+A D++ R PDS + +L+ V L R
Sbjct: 407 AQRAVDAICRVAPDSEARDALISVCYIVLSR 437
>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
Length = 308
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++N + ++ ++ + + Y + GGKR+RP L T ML A
Sbjct: 25 QRINHFLSNQLPQSPTEQPPLNQAMAYAVLLGGKRIRPFLMYTTGKMLGVPLTTLDHSAA 84
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ +D+ LRRGK + + T++L G+ L + AF ++
Sbjct: 85 AIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILAGNALQALAFELIANAPHL 144
Query: 128 EALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L L+ +K+L++TE + +H K+ ++ S +
Sbjct: 145 TDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTELEQIHRHKTGALIVASVLMA 204
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V+ N+++Q L+ Y +G+AFQ+ DD+LD G+ +++GK +G D + K T P
Sbjct: 205 VNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTDKIGKTVGADQQLHKSTYPK 264
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L L + +A Q A ++L
Sbjct: 265 LL--------------------------------------GLTQAKQKAQDLHQTALNAL 286
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
LP S +L E+ DF + R N
Sbjct: 287 AELPFKS--TALKELADFIIHREN 308
>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 297
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 76/334 (22%), Positives = 125/334 (37%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ + + V+ + + +D +I ++Y +F+GGKRLRP+L LA A +
Sbjct: 4 DLKQYLAQRRQMVDAALEAWLPADESGGVILKAMRYSLFAGGKRLRPILCLAGAEAVGGD 63
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACA+E IHT +L+H +DD RRG V+G +VL GD LL+QA
Sbjct: 64 PRRAMFCACALEMIHTYSLIHDDLPAMDDDDYRRGVPTNHKVFGQGMAVLAGDGLLTQAM 123
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVIKSK 168
++ + + L A + ++ ++ K
Sbjct: 124 VLLTDAAAVGDLPAERARQAANVVMRAAGHLGMVGGQAADLLAETMEPDLAMVDYIHARK 183
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A+LE ++AG L YG +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 TGALICASLEAGGILAGADRDRLSRLVRYGRRIGLAFQIADDLLDLEGDAETLGKATGAD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P +L
Sbjct: 244 AAKGKMTYPAVL--------------------------------------GPAQARQTGQ 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A + L + L + + + R +
Sbjct: 266 RLVEEAVAIIAEL--GPPARPLELLAHYIMSRTH 297
>gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M +D+ + +E +N + + + E++ + +KY +F+GGKRLRP+L ++ ++
Sbjct: 1 MFDDILREKIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + +ACAIEFIHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ F
Sbjct: 61 KEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSL---------SKNLDVTEEDYLHVIKSKT 169
++I+ L A + S+N ++ E D + KT
Sbjct: 121 EVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ ++I G + + L SY LG AFQ+ DD+LD +G+ ++GK+IG D
Sbjct: 181 GALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDI 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
NGK T +L L +
Sbjct: 241 ANGKSTFVSVL--------------------------------------GLQRSVELVNE 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA L + + L + + +R +
Sbjct: 263 LTEKAISILNDFGNKG--EFLKSLTKYMAERDS 293
>gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1)
[Caenorhabditis elegans]
gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 393
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 87/352 (24%), Positives = 145/352 (41%), Gaps = 40/352 (11%)
Query: 2 KMLEDLT-LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L + V L + S+ + + Y GGK LRP ++L
Sbjct: 49 DIMVQLIPQDESGAVENLADLNVTSN---LGRMTHYYFQQGGKMLRPTVSLLMGNACNSA 105
Query: 61 GDNHV--------------------------LLACAIEFIHTATLLHDDVVDDSALRRGK 94
+ + + E IHTA+L+HDDV+D++ RRG
Sbjct: 106 ANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMIAEMIHTASLVHDDVIDEANTRRGS 165
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ VWGN+ SVLVGDF+L++A ++ + ++ + L GE Q+S +
Sbjct: 166 ASVNAVWGNKMSVLVGDFILARATQILCSIGKPNIISVMASIIEDLVLGEFMQMSTTPTD 225
Query: 155 DVTEEDYLHVIKSKTAVLFSA----ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ I+ S + L G + + YG NLGIAFQL DD
Sbjct: 226 ATPVDRMKAYIEKTHRKTASLFASSCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADD 285
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+LD+ +EMGK + D + G T PV+ A ++ + + +DG + +KA
Sbjct: 286 LLDFIATADEMGKPVAADLKLGLATAPVLYACEQYPELNTMLLRKFKHDG-----DAEKA 340
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQRL 321
I+ + + T SY QKA + LP+ + + L+++ R
Sbjct: 341 REIVVNSDGMDKTRRLIDSYSQKAVEMASSLPNRNESTEHLIKLAMSQSDRK 392
>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
Length = 296
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQNRINHFLEAQFEGIESHNAPLLNAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + S V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P + +L + +F + R +
Sbjct: 267 YQSALSELEKIPFN--TTALRALAEFIITRKS 296
>gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
17393]
gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
17393]
Length = 324
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 5/294 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+EK+N I + + V+Y++ GGKR+RP+L L + + A
Sbjct: 8 LEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPAIG 67
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + E
Sbjct: 68 IEVYHNYTLLHDDLMDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAECSPSFLK 127
Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L + T + EG+ + + DV E+YL +I+ KTAVL +A+L + + + G
Sbjct: 128 EVMDLFSLTALEICEGQQMDMEFEQRNDVAAEEYLEMIRLKTAVLLAASLRIGARLGGAS 187
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
L +GM +G+AFQL DD+LD G V GKNIG D K T +I AF+
Sbjct: 188 VEDADRLYDFGMQIGVAFQLKDDLLDVYGNVKVFGKNIGGDILCNKKTYMLIKAFEHADS 247
Query: 248 REKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ VE + + + E + Y +A +SL
Sbjct: 248 SQREQLNYWVHAKAFQPVEKIAAVTELYNQIGVKAICENQMLEYSNRAMESLAA 301
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 51/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E V + + ++ + + ++Y + +GGKRLRP+L LA + + A A+
Sbjct: 20 ESVELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGNVAAAMPTAVAL 79
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ LRRG+ V+G T++L GD LL++AF +V +
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAFEIVALRSPGVS 139
Query: 130 LEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + V G S+ +V + ++ KT L SA +
Sbjct: 140 PECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTGALLSACVICGG 199
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LI + + QAL++Y +G+AFQ++DD+LD + +GK G+D K T P +L
Sbjct: 200 LIGDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLVADKTTYPKLL- 258
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + RA +AK L
Sbjct: 259 -------------------------------------GLKASRERAEQLVAEAKQGLDPW 281
Query: 302 PDSSWKKSLMEVVDFCLQR 320
D + L+ + D+ R
Sbjct: 282 RDRAA--PLLALADYITGR 298
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/335 (19%), Positives = 123/335 (36%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ + +VN + + + + + ++Y + +GGKR+RP+L A L
Sbjct: 1 MIAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + ACA+E IH +L+H +DD LRRG+ + ++L GD L S A
Sbjct: 61 KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA 120
Query: 118 FCMVIETK----------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F +++ + Q A + + G+ L +
Sbjct: 121 FSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHK 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ + + + ++L++Y +G+AFQ+ DD+LD + +GK G
Sbjct: 181 TGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGA 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT P ++ L + A
Sbjct: 241 DIARDKPTYP----------------------------------ALL----GLDAAKAYA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +LR + + L ++ + + R N
Sbjct: 263 LELRDQALHALRPFD--AAAEPLRDLARYIVDRRN 295
>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter aphrophilus NJ8700]
Length = 296
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 58/330 (17%)
Query: 11 DMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
D+++V I + I S + + +KY + GGKR+RP L AT +L +
Sbjct: 7 DLQQVQQRINSFLASQFEHINSSPAPLVEAMKYGLLLGGKRIRPFLVYATGRILGANLAH 66
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF ++
Sbjct: 67 LDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQSFAFEIL 126
Query: 122 IETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ A + L+L+ L +S K + +TE +++H+ K+ +
Sbjct: 127 TDIPDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEHIHLNKTGALLT 186
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ L ++ Q L+ Y +G+AFQ+ DD+LD G +GK +G D +
Sbjct: 187 AALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEGNSETIGKPVGSDLNSD 246
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + +A +
Sbjct: 247 KSTYPKLL--------------------------------------GLAGAKQKAQELYE 268
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L+ LP +L + +F ++R N
Sbjct: 269 TALAELQNLP--FDTTALYALAEFIIKRQN 296
>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 297
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 57/337 (16%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK + + L+ +E +N ++ K + D ++ ++Y + +GGKRLRP+L + A +
Sbjct: 1 MKNIDFKKYILQKVEYINLVLKKFLPKDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ +N + ACAIE++HT +L+HDD+ +D+ LRRG A +G ++L GD LL++
Sbjct: 61 VKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCGDALLTE 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV------------ 164
+F ++ ++KS E ++ G ++ + +
Sbjct: 121 SFSLITKSKSSEKNINEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKILLGEKIKFI 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KTA L A+L++ +++AG +AL+ YG N GIAFQ+VDD+LD + +GK
Sbjct: 181 QIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADKKLLGKE 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G D NGK T+ + + E
Sbjct: 241 -GSDAENGKLTVLSLC--------------------------------------GKREAE 261
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+AY + +KAK ++ + S + + ++D+ R
Sbjct: 262 KKAYEHIKKAKKAVSVFGNKS--EIFVYLLDYIADRT 296
>gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275]
Length = 298
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 125/322 (38%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L AY +A L
Sbjct: 256 M--------------------------------------GLDGARAYAYQLTDEAVSLLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
DX253]
gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
DX253]
Length = 276
Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 15 VNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V + + + + + + + + SGGKR+RP + + +N V IE
Sbjct: 7 VEDRLEEVVERVEPRELSEQLAHTALSGGKRVRPTVAMLACEAAGGDAENAVDFGVGIEL 66
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H A+L+ DD++D S +RRG +A +G +++ D +L +AF + A+
Sbjct: 67 VHDASLVVDDIIDRSDVRRGTESAWAEYGYGRAIIASDGMLGEAFELFS-----SDPRAM 121
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+VA ++ E + + S + +Y+ + + KT LF AA E+ ++ A A
Sbjct: 122 EVVAESMIELGMGEASELVATPSNQSEYMELARRKTGALFRAAAELGAIAADADPETIDA 181
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
Y +GIAFQ+ DDVLD + +++GK G+D G+P++ +
Sbjct: 182 FGEYAERVGIAFQIRDDVLDATADPDDLGKPTGQDEEIGRPSIVQVTDL----------- 230
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLM 311
+ + A+ A +L + PDS+ L
Sbjct: 231 -------------------------SAEEANELAHKQSDAALAALDRVDAPDSAALDYLR 265
Query: 312 EVVDFCLQRLN 322
+ +F + R +
Sbjct: 266 DFAEFVVTREH 276
>gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 113/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLEPAKRYALELRDQALTAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 SPFD--AAAEPLRELARYIVERRH 295
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 55/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ ++V + + + + + ++Y + +GGKR+RP+L LA A L
Sbjct: 2 DIKQYLNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAGGKRIRPILCLAAAEALPT 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A A+E IHT +L+H +DD LRRG +G ++L GD LLS A
Sbjct: 62 DSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSFA 121
Query: 118 FCMVIETKSQEALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + + + A + G ++ + E + +
Sbjct: 122 FELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHRC 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + A++ ++ G +AL SYG +G+AFQ+VDD+L+ G+ +GK G
Sbjct: 182 KTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L T +A
Sbjct: 242 DAARGKATYP----------------------------------ALL----GLEATRRQA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L + L E+ + R
Sbjct: 264 DEAVAGAITALNGF--GEEAEPLRELARYIAAR 294
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 132/334 (39%), Gaps = 55/334 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+K T +V+ + +++ + + ++Y +F+GGKR+RPMLT A+A ++
Sbjct: 3 LKQFSTYTQS---RVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVG 59
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
A A+E IH +L+HDD+ +D+ LRRGK + + T++L GD L +
Sbjct: 60 DISSLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTF 119
Query: 117 AFCMVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ S + A+ L+ + G++ LS E +
Sbjct: 120 AFELLSNPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKT 179
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ ++ + V+ L +Y +G+AFQ+ DD++D + +GK D
Sbjct: 180 GALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSD 239
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L +
Sbjct: 240 AEANKATYPKLL--------------------------------------GLDGAKALVV 261
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A + D S + L ++ ++ + R +
Sbjct: 262 RLHEQAIAQISEFGDKS--QPLTDLANYIIDRNH 293
>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 305
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ L ++ + +N + + + + + D ++Y GGKRLRP L L +A +
Sbjct: 7 VSHLNEVMAAEALAINDHLSQLMPATDGPEGRVVDAMRYAALEGGKRLRPFLVLQSAQLF 66
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ +A AIE IH +L+HDD+ +D+ LRRG+ + T++L GD LL+
Sbjct: 67 SVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGDALLT 126
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------------LH 163
+AF ++ + + LA + + + +
Sbjct: 127 KAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVPAITR 186
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ + KT L S + +++ S RQAL +Y +LG+AFQ+ DD+LD G+ +GK
Sbjct: 187 MHQLKTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGK 246
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D +GK T +L L
Sbjct: 247 TAGKDEASGKSTFVSLL--------------------------------------GLERA 268
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++A + L + + L V F + R +
Sbjct: 269 RDQADMLAEQAVNHLDAFDEKA--DLLRAVARFVVDRKS 305
>gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
Length = 326
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP A + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELGQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ ++LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYANILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFGPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 296
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILK-------RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D++ V I + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SQDLQHVQQRINQFLAKQFAHIDSASAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADM 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE IH +L+HDD+ LRRG + + T++L GD L + AF
Sbjct: 65 AHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFE 124
Query: 120 MVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + A + L L+ L +S K + + E + +H+ K+
Sbjct: 125 ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ + + ++ Q L+ Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 185 LTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTGSDLT 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 ADKSTYPKLL--------------------------------------GLEGAKQKALEL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L+ LP + +L + +F ++R +
Sbjct: 267 YERALTELKNLPFN--TTALYALAEFIVKRKS 296
>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
Length = 302
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ + + D Y + +GGKR+RP+L + ++ V A A+E IHT +L+HDD
Sbjct: 41 GAKYKALYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDD 100
Query: 84 --VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACT 139
+D+ +RRG+ + G ++L GD L + A + ++ +++ + +
Sbjct: 101 LPCMDNDDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSDLSAEKKTAMIKELYDR 160
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
Q + T + L + + KT+ L +AA + + AG A ++Y
Sbjct: 161 TLGMIEGQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAH 220
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++G+AFQ+VDD+LD V E+GK IG D + K T +L
Sbjct: 221 DVGLAFQIVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLL------------------- 261
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
L A Y + A+++L ++ + L + D L
Sbjct: 262 -------------------GLDKARELAKKYTEGAENALSAFENNEF---LCRLTDLLLN 299
Query: 320 RLN 322
R N
Sbjct: 300 RKN 302
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/324 (19%), Positives = 112/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + ++ + D ++Y + +GGKR+RP+L A L + ACA
Sbjct: 12 RVNAALESLFQAPGPELARLYDAMRYSVMNGGKRVRPLLAYAACEALGGEARDADGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A A D+L
Sbjct: 251 ---------------------------------ALL----GLDAAKSYALELRDMALDAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ L ++ + ++R +
Sbjct: 274 NPF--GPAAEPLRDLARYIVERRH 295
>gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
Length = 299
Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 129/325 (39%), Gaps = 56/325 (17%)
Query: 14 KVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+V + +R + E + ++Y + +GGKRLRP+L L A + + +
Sbjct: 13 EVEVYLRERFGARMRERGVPENLLAAMEYSLLAGGKRLRPVLCLVFAELFDADRARVMPF 72
Query: 68 ACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A E IHT +L+H +DD LRRG+ + V+G ++L GD LL++AF +
Sbjct: 73 AAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDALLTEAFGCMGRVW 132
Query: 126 ---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A + A + G++ + + VT + + KT L +A+
Sbjct: 133 PGVAAELVLPALAEAAKAAGAAGMVGGQVLDMDYTAREGVTLAELARMQALKTGALLTAS 192
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+++AG + YG +G AFQ+VDD+LD G+ +GK +G D GK T
Sbjct: 193 CVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAATLGKPVGSDREQGKNTY 252
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P ++ L ++ A A
Sbjct: 253 PSMI--------------------------------------GLDESRRLAEERVAAAIA 274
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + L ++ + + R+
Sbjct: 275 AIEPY-AGEAAEFLRDLARYIVVRV 298
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 52/322 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
VN + + + I + ++Y + + GKR+RP+L +A ++ + ACA+E
Sbjct: 65 AVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVE 124
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G +VL GD L+S AF + + +
Sbjct: 125 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPA 184
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV----------IKSKTAVLFSAALEVS 180
+ + + L + +D+T KTAVL AA +
Sbjct: 185 RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLG 244
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 245 AIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM 304
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ A A + L
Sbjct: 305 --------------------------------------GLEKSKDFADKLLSDAHEQLHG 326
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
S K L+ + ++ +R N
Sbjct: 327 FDSSRVK-PLLALANYIAKRQN 347
>gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 52/322 (16%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
VN + + + I + ++Y + + GKR+RP+L +A ++ + ACA+E
Sbjct: 65 AVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVE 124
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD +D+ LRRGK V+G +VL GD L+S AF + + +
Sbjct: 125 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPA 184
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV----------IKSKTAVLFSAALEVS 180
+ + + L + +D+T KTAVL AA +
Sbjct: 185 RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLG 244
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 245 AIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM 304
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ A A + L
Sbjct: 305 --------------------------------------GLEKSKDFADKLLSDAHEQLHG 326
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
S K L+ + ++ +R N
Sbjct: 327 FDSSRVK-PLLALANYIAKRQN 347
>gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 58/338 (17%)
Query: 1 MKMLEDLTLKDME-KVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M+ L +L K + +V+ + + + S E+I ++Y IF+GGKRLRP + +A A
Sbjct: 1 MEFLNEL--KKIAGQVDAALNRYLLPESSCPEIIHRAMRYSIFAGGKRLRPAMLIAAAEA 58
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ D + ACA+E IHT +L+H +DD RRGK V+G ++L GD LL
Sbjct: 59 VGGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALL 118
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHV 164
+ +F ++ + + +V +S N ++ ++
Sbjct: 119 TMSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYI 178
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT LF AA+ ++++G + ++L +Y + G+AFQ+ DD+LD G++ + GK
Sbjct: 179 HTKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQKTGKP 238
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G D +N K T P + L +
Sbjct: 239 VGSDEKNNKATYPALY--------------------------------------GLEEAY 260
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A ++A +L L E+V F + R +
Sbjct: 261 RLAGYSAEQALYALEPF--GEKANFLKELVKFVVNRDH 296
>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
Length = 296
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLIL-------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + I S + D +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQNRINHFLEAQFEGIESHNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + S V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 55/333 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDV--EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MK ++M V + + +DV + + + Y + +GGKRLRP+L +A A +
Sbjct: 1 MKE-RWRARQEM--VERALQAELDRTDVLDDTLRQAMAYSLMAGGKRLRPVLLMAAADAV 57
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
G + +ACA+E IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LL+
Sbjct: 58 GGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLT 117
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSK 168
AF +++ + A L +V + ++ ++ E+ V K
Sbjct: 118 LAFTVILRQQDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGK 177
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T LF AAL +++ G + +L +Y G+AFQ+ DD+LD G ++GK +G D
Sbjct: 178 TGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGKPVGSD 237
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T + +L + + A
Sbjct: 238 EKNHKSTYVSLT--------------------------------------SLDEAQELAA 259
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A +LR + L E+V + + R
Sbjct: 260 QTVKDACAALRDF--GAEADFLRELVSYLVYRK 290
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 58/337 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
L + + +E + + + + +D + D ++Y + GGKRLRP+L +A +
Sbjct: 11 TLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAACEAV 70
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IH +L+HDD +D+ LRRGK + +G ++L GD L +
Sbjct: 71 NGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQA 130
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKS 167
AF + + + LA+ Q +T + +
Sbjct: 131 LAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHEMHRL 190
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + + + + AL+ YG +G+AFQ+VDD+LD + +GK G+
Sbjct: 191 KTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSATLGKTAGK 250
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT ++ L ++ A
Sbjct: 251 DAAQDKPTFVSLM--------------------------------------GLQASKDYA 272
Query: 288 YSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
KA SL L ++ +L + D + R +
Sbjct: 273 QQLLGKALASLDASGLGNTH---ALHALADMLVNRHH 306
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVEAALEHYLPAESTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVL 130
Query: 121 -VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + + A+L +A
Sbjct: 131 APAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + I + I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+
Sbjct: 96 ESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENATIPAACAV 155
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LLS AF + +
Sbjct: 156 EMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLAFEHMTTAEISSE 215
Query: 130 LEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + + +V E + KTAVL A +
Sbjct: 216 RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLG 275
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 276 AIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI 335
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ + A+ L+
Sbjct: 336 --------------------------------------GLEKSKEFVKRLTKDARQHLQG 357
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
S L+ + F R
Sbjct: 358 F-SSEKVAPLVALTTFIANR 376
>gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 115/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K ++E + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHPTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--AAAEPLRQLARYIVERRH 295
>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
Length = 295
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/325 (19%), Positives = 119/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + ++++ + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEALLQPPRAELQRLYQAMRYSVVNGGKRVRPLLVYAACEALGGTPERAEGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + ++L GD L + AF ++ + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAFEVLTDPRRN 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
L L + G+ L + A++ ++
Sbjct: 131 PRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL Y +G+AFQ+ DD+LD + +GK G+D N KPT P
Sbjct: 191 LGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTATLGKTQGKDQANDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A + +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYALALRDQALGA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + + ++R +
Sbjct: 273 LEGFDAGA--DPLRALARYIVERRH 295
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K E+V + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 6 DFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEA 65
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+H +DD LRRG+ V+G ++L GD LL++AF
Sbjct: 66 TQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFE 125
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV E L V G S+ +V E ++ KT
Sbjct: 126 MVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGA 185
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L SA + ++I G ++ +AL++Y +G+AFQ++DD+LD +GK G+D
Sbjct: 186 LLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIA 245
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA +
Sbjct: 246 DKTTYPKLL--------------------------------------GLDESRRRADALV 267
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK+SL+ + + L+ + DF R
Sbjct: 268 NEAKESLQPWAEKAV--PLLALADFITSR 294
>gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 124/322 (38%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + ++Y + GGKR+RP+L A + ++A
Sbjct: 15 AAFEEVLRRVLPQPEVSPQRLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAA 74
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
++E IH +L+HDD+ LRRGK + + T++LVGD L + AF ++ E +
Sbjct: 75 SVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLTEHRLS 134
Query: 128 EALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + LA + +T + ++ KT L AA+ +
Sbjct: 135 DGPQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPELENMHIHKTGALIRAAVLL 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ V L Y +G+AFQ+VDDVLD + +GK G+D N KPT +
Sbjct: 195 GAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTL 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + A + ++A +SL
Sbjct: 255 L--------------------------------------GVTAAREMANNLHREALESLA 276
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + L E+ DF + R
Sbjct: 277 EFGD--AAQRLRELADFIVLRK 296
>gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/330 (16%), Positives = 109/330 (33%), Gaps = 53/330 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
E L + +++ + + S E + ++Y + GGKR+RP+L A+ + +
Sbjct: 4 EALFARWRDRIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQP 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDF 112
++ A A+E IH +L+HDD+ +
Sbjct: 64 ESLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFG 123
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL+ A + A + A + G+ + + + KT L
Sbjct: 124 LLADAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALT-RMHALKTGAL 182
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA+ + +L L S+ LG+AFQ+ DD+LD ++GK G+D
Sbjct: 183 IRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQD 242
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P ++ + + +
Sbjct: 243 KSTFP----------------------------------ALL----GMDGAKAQLRELAA 264
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +L D +L + ++R +
Sbjct: 265 RMQSTLAGYGD--EADALRALATLAVERDH 292
>gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
Length = 195
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
E++QL + D TEE Y+ VI SKTA LF +A ++ +++ V AL++YG LG
Sbjct: 18 EVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGT 77
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A + T + I
Sbjct: 78 AFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPENALMIREAIEKAN-G 136
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+E L + +M+E +L T +A KA L LP+S +K++L+ + ++R
Sbjct: 137 MERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVLPESEYKEALITLAHVAVKRT 194
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ K E+V + + + + + ++Y + +GGKRLRP+L LA +
Sbjct: 6 DFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEA 65
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IHT +L+H +DD LRRG+ V+G ++L GD LL++AF
Sbjct: 66 TQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFE 125
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
MV E L V G S+ +V E ++ KT
Sbjct: 126 MVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGA 185
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L SA + ++I G ++ +AL++Y +G+AFQ++DD+LD + +GK G+D
Sbjct: 186 LLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAGKDLIA 245
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L ++ RA +
Sbjct: 246 DKTTYPKLL--------------------------------------GLDESRRRADALV 267
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
AK++L+ + + L+ + DF R
Sbjct: 268 NAAKEALQPWAEKAI--PLLALADFITSR 294
>gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
Length = 281
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 44/320 (13%)
Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + + ++V + + + + + D V+++ +GGKR+RP +T+ L
Sbjct: 1 MMEYLQRRRDRVEERLEAVLDGVEPDELADEVRHVALAGGKRVRPTVTVLVCEALGGEPA 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ V A IE +H A+L+ DD++D+S +RRG +A +G+ +++ D LL +AF +
Sbjct: 61 DAVEFAVGIELVHNASLVIDDIIDESDVRRGTPSAWAAFGHGPAIIASDGLLGEAFALFS 120
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
A+ V ++ E + + + E +Y+ + + KT LF AA E+ ++
Sbjct: 121 -----SDERAMQAVTESMVELGEGEATELVSQPTNETEYIELARRKTGALFRAAAELGAI 175
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A +A Y +G+AFQ+ DDVLD + ++GK G+D +P+ +
Sbjct: 176 AADADAYTVEAFGQYAERVGVAFQMRDDVLDATADAEKLGKPAGQDAEMDRPSFVEVTDL 235
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL- 301
+ RA + A ++L +
Sbjct: 236 TPA------------------------------------EANERARAESDAALEALATVD 259
Query: 302 -PDSSWKKSLMEVVDFCLQR 320
DS + L ++ +F + R
Sbjct: 260 TDDSQATEYLQDLAEFVVVR 279
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
Length = 307
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 124/326 (38%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V+ + + + + + ++Y GGKRLRP L A M N + A
Sbjct: 20 QRVDEALNQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVYAVGEMFNVPVANLDVPAA 79
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ +D+ LRRGK + +G ++L GD L + AF ++ +
Sbjct: 80 AIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILAKNAMP 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI----------KSKTAVLFSAAL 177
+ A + + + + I A++ +A
Sbjct: 140 DVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALIRAAVR 199
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + V AL Y ++G+AFQ+ DD+LD G E GK G D GK T P
Sbjct: 200 LGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAGKSTYP 259
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A +A D+
Sbjct: 260 ----------------------------------ALL----GLAQAQKKAQELYNEALDA 281
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQRLN 322
L L + +L ++ +F ++R N
Sbjct: 282 LAFLEQYEYDTSTLKQLANFIVERKN 307
>gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640]
gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06]
Length = 298
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y + GGKRLRPML LA + + E D
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ + A++ +A +
Sbjct: 136 PAARQLAMLSVLAKAGGSMGMAGGQTIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLPENSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L ++ +F + R
Sbjct: 278 PFGNKALR--LRQLAEFTIART 297
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 54/333 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + + +Y + SGGKRLRP+L L T L
Sbjct: 1 MMDVANYLQTQSQLIEKRLDQLVSKRHGPHQNLIEAARYALLSGGKRLRPILALTTVQTL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ AC +E IHT +L+HDD +D+ RRGK+ + +VL GDFLL+
Sbjct: 61 HGDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
AF ++ K + + + L+ + + + + E + ++K
Sbjct: 121 YAFELLATDKYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L +A++E ++A ++ +G N+G+AFQ+ DD+LD + G+ IG D
Sbjct: 181 TAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T +L + + A
Sbjct: 241 ILKDKSTYVSLL--------------------------------------GIEQAKAYAL 262
Query: 289 SYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
++ QKA ++L+ LP D+S+ L+ + DF + R
Sbjct: 263 NFYQKAINALKLLPYDNSF---LIHLADFIIHR 292
>gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
Length = 334
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 6 DLTLKDMEKVNFLILKRICS------DVEMIPDVVKYLIFSGG-KRLRPMLTLATALMLE 58
L KD++ ++ + S + + ++Y + G KR+RP+L L L
Sbjct: 4 SLEAKDLKACRQIVQDTLQSLMLDKRTPQALYAPIRYTLEQEGAKRVRPVLALLMQAYLR 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A+E H TLLHDDV+D+S +RRGK + +G ++L GD +L A+
Sbjct: 64 PEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSVYAKYGLTPAILSGDAMLILAY 123
Query: 119 CMVIETKSQEA----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
M+ E S E ++ + +A + EG+ L + V++E YL +I KTAVL +
Sbjct: 124 QMLTEGVSPEMLPDLIQNFNKMATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIA 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A ++++ + ++ ++G NLG+AFQL DD LD G+ GK +G D GK
Sbjct: 184 TATRFGAILSKGSVTELESSYAFGWNLGLAFQLQDDYLDLYGDSETFGKPLGGDILEGKK 243
Query: 235 TLPVILAFQRGTKREKNFWKSTIND-GKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T+ LA+ ++ ++ T+ + + E + + E + Y +
Sbjct: 244 TILHTLAYATASQAQRQALTETMRRSNEQAEEKISAVKTLYDEMDIATQVQALVRDYLAE 303
Query: 294 AKDSLRCLPDSSWKKS--LMEVVDFCLQR 320
A+ +L L + +++ L V +R
Sbjct: 304 AQKALDALESALGREATQLRAFVSKIAER 332
>gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 264
Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 98/265 (36%), Positives = 157/265 (59%), Gaps = 3/265 (1%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
ML Y G+N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+
Sbjct: 1 MLNYSGENRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLT 60
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AF +IE + L LS + L +GE++Q+ + E+Y +I KTA LFSA
Sbjct: 61 LAFRWLIECGNLNILSILSKASHLLVKGEIKQMKARFDPHTVRENYFDIIGEKTASLFSA 120
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
E +S ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK T
Sbjct: 121 CCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVT 180
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP I+A+++G+ E+ FW+ + + + +A + + A+ + +A Y A+
Sbjct: 181 LPAIIAYEKGSPAEQTFWEKCFSSARHN---FDQALHYINHHNAIQLSMEKARHYINMAQ 237
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + DS +K +L+ ++ ++R
Sbjct: 238 NDISTFSDSFYKTTLINFLNASIER 262
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 116/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K ++E + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--AAAEPLRQLARYIVERRH 295
>gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces
griseoaurantiacus M045]
gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GGK +RP LTL +A+ + ++ V A A+E +H TLLHDDV+D LRR + AA
Sbjct: 61 GGGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDVIDGDDLRRHRPAAWS 120
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDV 156
V+G +VL GD LL A ++ +T+ Q ++ L L EG+ R ++ K +V
Sbjct: 121 VFGTPAAVLTGDALLVAAMRVLTDTQQQRMAVAVKELVDALLELVEGQSRDVAYEKAPEV 180
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ YL + + KT L A + ++AG + L+ +G LG+AFQ DDVL G
Sbjct: 181 SVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCADDVLGIWG 240
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ GK +G D K +LPV+ A + + + + +++ A ++ E
Sbjct: 241 HTSRSGKPVGGDLAARKKSLPVVTALESDGPAARRLRTLYDSPDALGEQDVALARELVEE 300
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
E+ A A +L + P + + L E+ +R
Sbjct: 301 AGGREAAEHEAERQLSAALRALSRVRPAAEAHRQLREIAWAVARR 345
>gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185]
gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195]
gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223]
gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185]
gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195]
gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223]
gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678]
Length = 293
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 125/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + ++V+ + +R + + + Y GGKR+RP L + M
Sbjct: 1 MLVSAIQEYQQRVDNQLKQRFSTLEDTAPQLKAAMTYGALLGGKRIRPFLVYSVGRMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 ELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A A+ + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAQDTAKQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829]
gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
Length = 366
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/316 (23%), Positives = 118/316 (37%), Gaps = 23/316 (7%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------------DNHVLLACAIEFI 74
+ + + +GGK +RP L + A Y G D + ++CA E
Sbjct: 49 AYLYQPLAHFTVNGGKLIRPALCVLGAYACGYEGMLKDNCSIQKSVSDTLLQISCAFEHF 108
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALE 131
A L+HDD+ D+S LRRGK V G + +GD L A + + +
Sbjct: 109 QAAALIHDDIADESLLRRGKPCLYRVHGTGLATNMGDSALVHALECINSLSGISDELRVR 168
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFSAALEVSSLIAG 185
+ Q + D S L + +L AG
Sbjct: 169 LIQEFITMEKHTIEGQALDVGWSNENRWDISLDDYLYMATSKTAYYSASTPLVIGALFAG 228
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+AL++YG+ G+AFQL DD L+ G+ N++GK++ D GK T + A
Sbjct: 229 ASQKRSEALRAYGLQAGLAFQLKDDELNLFGDANKLGKDLRSDIVEGKRTYLTLYALSHL 288
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDS 304
+ K + S + L +A ++ + A + A S Q+A + L
Sbjct: 289 NALQSAQLKEILTKPHNSPDELDEACALIEASGARTHSHNLARSLAQQADACIDENLFSK 348
Query: 305 SWKKSLMEVVDFCLQR 320
L + F +QR
Sbjct: 349 ETVAILHAMTAFFIQR 364
>gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 313
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/348 (21%), Positives = 125/348 (35%), Gaps = 66/348 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ V + + + ++Y + +GGKR+RP+L L TA +
Sbjct: 5 SEIKTRLRDAAAGVERYLAACLADRGIPARLRASMEYSLNAGGKRVRPVLCLTTAALFGL 64
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A AIE IHT +L+H +DD LRRGK + ++ T++L GD LL+ A
Sbjct: 65 PTERVMPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKMFDEATAILAGDGLLTDA 124
Query: 118 FCMVIETKSQEALEALSLVACT-----------------------LAEGELRQLSLSKNL 154
F + + A + G+ + +
Sbjct: 125 FDFMAGVGAGVGAAAGDENGGNAAIPAANVLAALRAVARAAGAPGMVGGQALDMEYTGRT 184
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
VT E+ + KT L A+ +L+AG + YG ++G AFQ+VDD+LD
Sbjct: 185 GVTLEEMAAMHAMKTGALLRASCLSGALLAGADADALARIADYGAHIGAAFQIVDDILDE 244
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ E+GK +G D GK T P +L
Sbjct: 245 VGDEAEIGKPVGSDAEQGKTTYPSLL---------------------------------- 270
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A A + L L + + + R +
Sbjct: 271 ----GVERSRALARERADAAIERLSPY-TGPDADFLRSLASYIVDRAS 313
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+E+ + + V + K + + ++ + + Y +FSGGKRLRP+L LA A +
Sbjct: 8 EIENYIFEQQQVVESALRKFVTGKAKKPRILHEAIDYCLFSGGKRLRPILCLAGAHAVCR 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + +ACA+E IHT +L+HDD+ RRGK + ++G ++L GD LL+ A
Sbjct: 68 NSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDALLALA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F + +S + LA + ++ ++ ++ KT
Sbjct: 128 FEVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYIHCRKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L + +L + ++ A + YG LG+AFQ++DD+LD +GK+ G+D
Sbjct: 188 AALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQTTEILGKSAGKDQ 247
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P I+ L ++ A
Sbjct: 248 KAKKATYPRIM--------------------------------------GLEYSKEAAAY 269
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y QKA L + L ++ +F L R
Sbjct: 270 YTQKALRYASKL--GEKGRLLSDLANFLLTR 298
>gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured
Verrucomicrobiales bacterium HF0130_14P10]
Length = 344
Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 150/313 (47%), Gaps = 2/313 (0%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + +L R + D+ + SGGKR+RP L A + +N + + +
Sbjct: 28 LASFDTYLLGRANHFDPAVRDLAVQALASGGKRIRPALVHACGIGNLAVSENLLKASSIV 87
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EF+H ATL+HDDV+DD+++RR + G ++L+GD L + A M E + E
Sbjct: 88 EFVHVATLVHDDVLDDASIRRDRQTVYADRGATAAILLGDALFAHALEMASEFQGNEVCR 147
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ GE++Q L + +T Y +I++KTA LF+ + + + +AG+ N+
Sbjct: 148 WVAAATRRTCSGEIQQSFLRGDFTLTSSRYKLIIEAKTAELFTVSCRLGAHVAGLDNATS 207
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-- 249
+G LG+A+Q+ DD++D G + GK++G D +GK TLP I F + +K E
Sbjct: 208 ALACEFGRRLGLAYQIYDDLVDVFGREADFGKSLGRDLAHGKVTLPTITLFSKLSKLEAS 267
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + + + E + + +MR++ + ++L D +
Sbjct: 268 RLHENLFNSGPEPNPEIIHEMVNLMRKHGVHHECRELLDEELSAIGNTLSEFTDDTIASR 327
Query: 310 LMEVVDFCLQRLN 322
L ++ + R++
Sbjct: 328 LDDLRQVIVDRIS 340
>gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
Length = 334
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 6 DLTLKDMEKVNFLILKRICS------DVEMIPDVVKYLIFSGG-KRLRPMLTLATALMLE 58
L KD++ ++ + S + + ++Y + G KR+RP+L L L
Sbjct: 4 SLEAKDLKAYRQIVQDTLQSLMLDKRTPQALYAPIRYTLEQEGAKRVRPVLALLMQAYLR 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A+E H TLLHDDV+D+S +RRGK + +G ++L GD +L A+
Sbjct: 64 PEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSVYAKYGLTPAILSGDAMLILAY 123
Query: 119 CMVIETKSQEA----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
M+ E S E ++ + +A + EG+ L + V++E YL +I KTAVL +
Sbjct: 124 QMLTEGVSPEMLPDLIQNFNKMATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIA 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A ++++ + ++ ++G NLG+AFQL DD LD G+ GK +G D GK
Sbjct: 184 TATRFGAILSKGSATELESSYAFGWNLGLAFQLQDDYLDLYGDSETFGKPLGGDILEGKK 243
Query: 235 TLPVILAFQRGTKREKNFWKSTIND-GKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T+ LA+ ++ ++ T+ + + E + + E + Y +
Sbjct: 244 TILHTLAYATASQAQRQALTETMRRSNEQAEEKISAVKTLYDEMDIATQVQALVREYLAE 303
Query: 294 AKDSLRCLPDSSWKKS--LMEVVDFCLQR 320
A+ +L L + +++ L V +R
Sbjct: 304 AQKALDALESALGREATQLRAFVSKIAER 332
>gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442]
gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442]
Length = 298
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGVVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + + T++LVGD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710]
gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304]
gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579]
gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149]
gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33]
Length = 298
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y + GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 121/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V + + + + ++Y SGGKRLRP+L AT L AC
Sbjct: 22 ARVEQALDYWLPEAQTHPARLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLDGPAC 81
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + T++L GD L + AF ++
Sbjct: 82 AVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAHDPGG 141
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
L +A G+ L+ + + I A++ ++
Sbjct: 142 VQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIRASVQ 201
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + V + Q L YG +G+AFQ+ DD+LD GE +GK G D R K T P
Sbjct: 202 LGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQAKATYP 261
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + + A + A +S
Sbjct: 262 ----------------------------------ALL----GMREARETADRLVEDALES 283
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L L S+ L + ++C+ R +
Sbjct: 284 LEGLDQSA--DVLRGIAEYCIGRNH 306
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 129/322 (40%), Gaps = 51/322 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E +N + K I + I ++Y IF+GGKR+RP+L LA ++ + + AC++
Sbjct: 121 ETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGGERSAIPAACSV 180
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+ DD +D+ LRRGK V+G ++L G LL+ AF + E
Sbjct: 181 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSK 240
Query: 130 LEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + D ED ++ KT L A+ +
Sbjct: 241 KMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHVHKTGALLEASAVIG 300
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I G + ++S+ +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 301 AVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPRVI 360
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ + A++ L+
Sbjct: 361 --------------------------------------GLEKSKEFVKKLNRDAREHLQG 382
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ K L+ + +F R N
Sbjct: 383 FDEDKVK-PLIALTNFIANRNN 403
>gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 346
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 67/322 (20%), Positives = 128/322 (39%), Gaps = 17/322 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGDN 63
V+ + + + + Y GK +RP L L A +
Sbjct: 24 VDPGLRAAVDTLPPPTRHIAGYHFGWWDENAEPAEHKAGKAIRPALVLLCARAVGSSDIE 83
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CM 120
+ A A+E +H +L+HDDV+D RR + A V+G+ ++L GD + + A
Sbjct: 84 ALPAAVAVELVHNFSLVHDDVIDRDVTRRHRPTAWSVFGDGAAILAGDAMSTLACAVLAD 143
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ ++ L +G+ +S + ++ + +KT L A +
Sbjct: 144 SGHPAAMDGIKLVNRAIQELIDGQHADVSFETREQIDPQECRAMAAAKTGALLGCACAIG 203
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G + L+++G +LG+AFQ VDD+L G+ GK + D R+ K +LPV+
Sbjct: 204 ARFGGGSPHQVERLRAFGTDLGLAFQHVDDLLGIWGDPQATGKPVYSDLRSRKKSLPVVA 263
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A + + E + +A ++ E + A +A SL
Sbjct: 264 ALASDSPAAAALSSLYSGTEPLRDEEITRAAALIEEAGGRQWSSTEAAGLLDRALASLAE 323
Query: 301 L--PDSSWKKSLMEVVDFCLQR 320
+ +S+ L + +R
Sbjct: 324 VGAEESAASD-LTTLARLVTRR 344
>gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
Length = 330
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+K++ I+++ + E+I + LI GGK+LRP L A +Y + L +IE
Sbjct: 13 KKLDKNIIEKTTTHREIINSAIVDLIDGGGKKLRPFLMFLAASFGDYDKKELLDLGSSIE 72
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+LLHDD++DD+ LRRGKV A+ +G +V +GDFL+S+ F ++ E +E L
Sbjct: 73 ILHMASLLHDDIIDDADLRRGKVTAQKRFGKNEAVFIGDFLISRTFDILFEYLDKETLIK 132
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
++ + EGE+ Q + +++ DY I+ KTA+LF+ + + + ++G++
Sbjct: 133 MNKNLRLICEGEIEQAEKKYDFNISIRDYYRRIRHKTALLFAISSYLGAYVSGIRGKKLN 192
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L G+ +G+AFQ+ DD+LD+ GE + GK I +D G TLPVIL FQ+ ++K
Sbjct: 193 ILYKLGLEIGMAFQIQDDILDFNGEQAKTGKKIAKDLEEGVITLPVILLFQKEEYQKKYS 252
Query: 253 WKSTIN--------DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + K+ E + +R + L ++ + + L LP +
Sbjct: 253 HVLEMGGLKNTELDNRKLEQETIISITEDVRNSSVLEESREILKIFITRVDKYLNYLPKN 312
Query: 305 SWKKSLMEVVDFCLQRL 321
KK L +++ + R
Sbjct: 313 KAKKRLKKLIAAQIDRK 329
>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 297
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 58/334 (17%)
Query: 7 LTLKDM----EKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L D+ +++N + +++ + + + + Y + GGKR+RP L AT ML
Sbjct: 4 LLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLLGGKRVRPFLIYATGRMLGV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S A
Sbjct: 64 PLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILAGDALQSFA 123
Query: 118 FCMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ E ++ V L ++ +K + + E + +H K+
Sbjct: 124 FELLATDPHLTDREKVAQVTELATASGAKGMCLGQSLDLIAENKAVSLEELELIHRNKTG 183
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+L S + ++ +++Q L +Y +G+AFQ+ DD+LD G+ +++GK +G D
Sbjct: 184 ALILSSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTDKIGKTVGSD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 244 EHLNKSTYPKLL--------------------------------------GLDGAKQKAE 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A SL LP +L E+ +F ++R N
Sbjct: 266 MLYQTALHSLEQLP--FDTTALKELANFIVKREN 297
>gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355]
Length = 298
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G ++L GD L +QAF ++
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLARPSGL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
Length = 293
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 55/327 (16%)
Query: 9 LKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + ++ + + + + + + ++Y + +GGKR+RP LTL + +
Sbjct: 5 NQYLSRIEEALASYLPAKDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAM 64
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
ACA+E IH+ +L+HDD +D+S LRRG+ A + +G ++L GD LL+ AF +
Sbjct: 65 PFACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALS 124
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL----------HVIKSKTAVLF 173
+S + A + V + + + + KT L
Sbjct: 125 PESIKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALI 184
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA ++ +AG R+A Y +G+AFQ+ DD+LD + +GK +G D +N K
Sbjct: 185 QAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISDPETLGKPVGSDDKNEK 244
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L + + Q+
Sbjct: 245 STYVSLL--------------------------------------GMEKAQQLVNELTQQ 266
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A+ +L S L E R
Sbjct: 267 AESALSAF--SEDTAFLREFAQSLANR 291
>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
Length = 297
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + +++N + +++ + + D + Y + GGKR+RP L AT ML
Sbjct: 4 DLFAELSQYQQRINHFLSEQLSQYPAYNTPLIDAMSYAVLLGGKRVRPFLIYATGKMLGV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E IH +L+HDD+ LRRGK + + T++L GD L S A
Sbjct: 64 PLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILAGDALQSFA 123
Query: 118 FCMVIETKS-------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ S + S++ + ++ + ++KT
Sbjct: 124 FELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELERIHRNKTG 183
Query: 171 VLFSAALEVSSL--IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ + + ++Q L Y +G+AFQ+ DD+LD G +GK G D
Sbjct: 184 ALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIGNSEVIGKTAGSD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 244 QALDKSTYPKLL--------------------------------------GLEGAKQKAE 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S Q A +L LP +L+ + +F ++R N
Sbjct: 266 SLYQTALKALETLP--FDTTALVALAEFIVKREN 297
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 52/321 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ + + + + + + + Y + +GGKR+RP+L LA D + LAC
Sbjct: 12 KRIDTRLAELLQTSTPEFSGLYEAMNYSLNAGGKRIRPVLFLAVLEAAGTDPDAFLDLAC 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H+ +L+HDD+ +D+ RRGK V+G+ T+VL GD LL+ AF ++ +
Sbjct: 72 ALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAAQSAA 131
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVS 180
A + L + + + D+ E + +SKT V+F+A ++++
Sbjct: 132 PAHKILQAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFTAIVQMA 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L+AGV+N +AL +YG LG+AFQ+ DD+LD G EMGK +G D +N K T +L
Sbjct: 192 ALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHKTTYVSLL 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ A +A +L+
Sbjct: 252 --------------------------------------GVEGAREEAKQTTARALAALQE 273
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+++ + L ++V + QR+
Sbjct: 274 FDENA--EFLRQLVIYLEQRV 292
>gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
Length = 384
Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 86/324 (26%), Positives = 140/324 (43%), Gaps = 19/324 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATALMLEYRGDN 63
V+ + + + S E + + Y +G GK +RP L L A L
Sbjct: 62 VDPELRRAVDSLPESMRRIGLYHFGWQHADGSPAAGNAGKAIRPALVLTAAATLGGHRQA 121
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H TLLHDDV+D RR + A V+G+ ++L GD L + A ++ E
Sbjct: 122 AVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDSDAILAGDALQALAHRLLAE 181
Query: 124 TKSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A + +A + E Q + DVT E+ L + ++KT L A
Sbjct: 182 DPHPASAAAAARLASCVVELCAGQHADTALEERRPEDVTLEEVLAMAEAKTGALLGCACA 241
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L AG + +AL ++G G+AFQL+DDV+ G+ GK G D K +LPV
Sbjct: 242 MGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVIGIWGDPGRTGKPAGADLIARKKSLPV 301
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A GT + +L++ + + + +A +A D L
Sbjct: 302 VAALASGTPAAAELAELYAA--PFQEGDLERTVLAVERAGGRDWAQAQAADRMARAVDEL 359
Query: 299 R-CLPDSSWKKSLMEVVDFCLQRL 321
+PD L+ + +F +R
Sbjct: 360 SRAVPDPESAGGLLALAEFVTRRS 383
>gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 115/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K ++E + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLTPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--AAAEPLRQLARYIVERRH 295
>gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
Length = 298
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 129/322 (40%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 125/324 (38%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + + + + + + ++Y + GGKRLRP+L +T + L A
Sbjct: 13 ARTERALEQVLPPADKPPKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLDAPAS 72
Query: 70 AIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + T++LVGD L S AF ++ ++ S
Sbjct: 73 AVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTSG 132
Query: 128 EALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + +A G+ L L E A++ ++ L
Sbjct: 133 LPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVLL 192
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + L + +G+AFQ+ DDVLD + +GK G D KPT P
Sbjct: 193 GAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDRARDKPTYPS 252
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L L + +A S ++A +L
Sbjct: 253 LL--------------------------------------GLPQAKAKAQSLLEQAHQAL 274
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
R + + + L + DF +QR +
Sbjct: 275 RAVD--APTEHLEWLADFVVQRRH 296
>gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
Length = 293
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVETALEHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------C 119
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALTSEVL 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + + A+L +A
Sbjct: 131 APAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 83/334 (24%), Positives = 137/334 (41%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
E L + + V I + + D +I + Y + +GGKRLRP+L LA
Sbjct: 2 EFESLFKRYRKMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGI 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A +E +HT +L+HDD+ +D+ RRGK V+G ++L GD LL++A
Sbjct: 62 APEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKA 121
Query: 118 FCMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F + +T Q + S E L++ +K
Sbjct: 122 FELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L +L ++AG +AL YG +LG+AFQ+VDD+LD G+ ++GK +G D
Sbjct: 182 TARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T + + +T+ RA
Sbjct: 242 EKNQKLTYVSLF--------------------------------------GIEETKKRAE 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK+ L+ P +++ +F L+R +
Sbjct: 264 EEINAAKNVLK--PYGEKSSFFIKLAEFILKRES 295
>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
Length = 294
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ + L+ E+V +I + ++ + I + + Y + +GGKRLRP+L +
Sbjct: 1 MMNEQLLQSTEEVEQVIYSYLPAEEGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G AIE IHT++L+HDD +D+ RRGK +V+G +VL GD LL A
Sbjct: 61 TGKEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---------K 168
+ + + V E +I K
Sbjct: 121 IETAARAFQMTDNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L AA+ + +++AG + + ++ +G+AFQ+ DD+LD +GK + D
Sbjct: 181 TGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T + +
Sbjct: 241 EKNNKTTYV--------------------------------------SLEGIEKAKRDVE 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A D L LP S+ L +++ + R
Sbjct: 263 KLSETAVDILYSLPGSN--DFLEDLIKVLVSR 292
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 77/330 (23%), Positives = 128/330 (38%), Gaps = 60/330 (18%)
Query: 14 KVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
VN + I + + D ++Y + +GGKR+RP L LA ++ + A A+
Sbjct: 81 AVNRALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEAWAMPAAAAV 140
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD LRRGK +V+G +VL GD LLS +F + S
Sbjct: 141 EMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPP 200
Query: 130 LEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYLHVIK-SKTAVL 172
+ ++ L ++ + + L I KTA L
Sbjct: 201 DVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPLERLEYIHLHKTAAL 260
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ + ++I G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D +
Sbjct: 261 LEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASD 320
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + A
Sbjct: 321 KTTYPKLL--------------------------------------GLEKSREFAEKLLS 342
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + L C D L+ + ++ R N
Sbjct: 343 DAIEQLDCF-DKEKAAPLLHLANYIAHRQN 371
>gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 294
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + ++V I + S+ + ++Y + +GGKRLRP+L LA + + +
Sbjct: 4 SFKAKLSQYQQRVETGIDTLLPSEDTHPVRLHRAMRYSMEAGGKRLRPVLVLALSELAD- 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G + + A AIE +HT TL+HDD+ D+S LRRG+ + + T+VL GD LL+ A
Sbjct: 63 SGQDPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLAGDALLTFA 122
Query: 118 FCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ + + G ++ ++ V + ++ ++KTA
Sbjct: 123 FELLSREYASSPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTLQYIHENKTA 182
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L +AAL + Q ++ G +LG+ FQ+VDD+LD MGK +G D
Sbjct: 183 ALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATSSAEAMGKPVGNDAS 242
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T + + A +
Sbjct: 243 ADKTTYVALH--------------------------------------GIEGAREHAKEH 264
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KA + + L ++ + L+++++ R+N
Sbjct: 265 TSKAIAAAKSLGGNN--RFLLDLIEQLEHRIN 294
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVEAALEHYLPAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVL 130
Query: 121 -VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + + A+L +A
Sbjct: 131 APAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRSLAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 295
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 115/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K ++E + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--AAAEPLRQLARYIVERRH 295
>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
Length = 297
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 57/338 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M +++ K +EK+ I + + + + + Y + +GGKRLRPML T M
Sbjct: 1 MPSIKEQLSKKIEKIEQTIDFYLPEEKGLQKTVLSAMNYSVKAGGKRLRPMLMAETYEMF 60
Query: 58 EYRGDNHV-LLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + AIE IHT +L+HDD+ D+ ALRRG A + +G ++L GD LL
Sbjct: 61 GGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAGDALL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--------- 165
+ AF + + + A + + + V E I
Sbjct: 121 NYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTLMYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+KTA L A+ + +++AG ++ +GIAFQ+ DD+LD E+GK
Sbjct: 181 NNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDVVSTSEEIGKPA 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +NGK T + + + ++
Sbjct: 241 GSDEKNGKNTYVLF--------------------------------------KGIEQSKK 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
A Y ++A L+ + +K S L E++ + + R N
Sbjct: 263 DAEQYTREA---LQIFDELEYKNSFLRELLLYLVGRKN 297
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+E + + +VN + + + + I + ++Y + +GGKRLRP+L LA
Sbjct: 1 MIEAYFAEKVPEVNRWLDRLMPPATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +ACA E +HT +L+HDD+ +D+ LRRG + T++L GD L++ A
Sbjct: 61 APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120
Query: 118 FCMVIETKSQEALEALSLV-------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ E + + + ++ + E + ++KT
Sbjct: 121 FRILAEMDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHRAKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ ++AG S L +YG +G+AFQ+ DD+LD ++GK G+D
Sbjct: 181 ALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPGKDAA 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P + L + +A +
Sbjct: 241 AGKATYPALY--------------------------------------GLEASRKQAEAL 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L L L E+ F + R +
Sbjct: 263 AEEAIAVLEPL--GQQAMLLAEMARFVVHRTS 292
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 55/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + +V+ + + + + ++Y +F+GGKRLRP+L +A A +
Sbjct: 8 DLKVYLEEKRVQVDAALDEYFPKGDGLTTALIKAMRYSLFAGGKRLRPILCIAGAEAVGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G + +ACA+E IHT +L+H V+DD LRRGK V+G ++L GD LL++A
Sbjct: 68 VGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGLLTEA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY----------LHVIKS 167
F ++ K+ E +E L+ V + + +
Sbjct: 128 FSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFETVKFLHTH 187
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT + A++ ++ AG + SV Q SYG +G+AFQ+ DD+LD G+ MGK G
Sbjct: 188 KTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSEIMGKMAGA 247
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P +L + +++
Sbjct: 248 DEGKGKTTYPSVL--------------------------------------GMDESKKIQ 269
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ + A L D + L ++ + ++R
Sbjct: 270 EALVRDAVQDLEVFGD--AAEPLRKIAYYIIERK 301
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
L + +++ I + + + E + ++Y +F+GGKR+RP+L LA A +
Sbjct: 12 DLNAYIKEKKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGGKRIRPILCLAAAEAVGT 71
Query: 59 -YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + +ACA+E+IHT +L+HDD+ +D+ RRGK + V+G+ ++L GD LL+
Sbjct: 72 SVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGDALLT 131
Query: 116 QAFCMVIETKSQE----------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+AF ++ T E + G + ++ + +
Sbjct: 132 EAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDTLNRIH 191
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT + +L ++++G AL YG +G+ FQ+ DD+L+ G+ +GK+
Sbjct: 192 NRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGDRTVLGKST 251
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D GK T P+++ L +
Sbjct: 252 GSDASRGKMTFPLLM--------------------------------------GLEPSRQ 273
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A++ ++A L + + L + + ++R
Sbjct: 274 KAFALVEEALRDLDGFDNRA--TPLRLMARYFVER 306
>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
Length = 299
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 134/333 (40%), Gaps = 58/333 (17%)
Query: 8 TLKDM----EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ ++VN I + + + + D + Y + GGKR+RP L AT ML
Sbjct: 7 LKTDLVTFQQRVNQFIEQELKQYSAHHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVS 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 67 LKALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAF 126
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + L+ + + L +S +K + ++E + +H K+
Sbjct: 127 ELIAKDPFLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLSELELIHRNKTGA 186
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ S + + ++ AL+ Y +G+AFQ+ DD+LD G+ +++GK G D
Sbjct: 187 LIVASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKIGKTAGSDE 246
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +A S
Sbjct: 247 SLNKSTYPKLL--------------------------------------GLEGAMEKAQS 268
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A +L LP ++L + F +QR +
Sbjct: 269 LYQTALKALDELP--FDTRALKALAHFIIQRES 299
>gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 287
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 74/325 (22%), Positives = 143/325 (44%), Gaps = 48/325 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+D+ + +N + + + + + + + ++Y + +GGKR+RP+L + +A ++
Sbjct: 2 EFKDILKEKASFINKQLDRFVPNCIPEELSNAMRYSLEAGGKRIRPILVIESAKAVKEDV 61
Query: 61 -GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + +A + EFIHT +L+H +DD LRRGK V+G ++L GD LL+ A
Sbjct: 62 NVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTYA 121
Query: 118 FCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
F ++ K S E + + + + ++ +D + +KTA SA
Sbjct: 122 FEVISNNKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKDVEFIHLNKTAKFLSA 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ ++A LK+YG+N+G+AFQ+ DD+LD G+ + GK + +D K T
Sbjct: 182 CCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEKAGKRLHKDKDKNKIT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P + L + A +KAK
Sbjct: 242 YPSLY--------------------------------------GLEKSIQIAKDCVEKAK 263
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +R L + L+++ + + R
Sbjct: 264 NEIRDLKKPEF---LIKLAKYIISR 285
>gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes Finland 1988]
Length = 274
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 134/244 (54%), Gaps = 2/244 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-E 58
+ L KD++ V + K + + E D +L+ +GGKR+RPM +A +
Sbjct: 6 LNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPN 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++
Sbjct: 66 ADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E K A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+
Sbjct: 126 EYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++G + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV
Sbjct: 186 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPV 245
Query: 239 ILAF 242
A
Sbjct: 246 FFAM 249
>gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
Length = 350
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 129/324 (39%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + +
Sbjct: 26 LRAAVDRLAPPMDTVAAYHFGWIDAHGNPADGDGGKAVRPALAVMSAEVTGAAPEAGIPG 85
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L+ A + +
Sbjct: 86 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALMVLANEILLELGTV 145
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A ++ L +G+ + +S VT E+ L + +KT L + A + +++
Sbjct: 146 EAARATRRVTTATRALIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACACSIGAVLG 205
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 206 GADDHTADTLEKYGYHLGLAFQAVDDLLGIWGDPVSTGKQTWSDLRQRKKSLPVVAALAA 265
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ + A A ++L
Sbjct: 266 GGPASERLGEILAADAKASDFENFSEEEFAARAALIEQAGGREWAVQEARRQHTIAIEAL 325
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + + DF + R
Sbjct: 326 DSIRMPERVRDEFAALADFVVVRK 349
>gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
Length = 365
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 55/336 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML------ 57
L +++ +V + + ++V + Y +G GKR P + L A +
Sbjct: 64 ALIKEEVSEVTNRLRSMVVAEVPELTSAAGYFFRAGAEGKRTCPTVLLLMASAISTDMSD 123
Query: 58 ------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
H+ +A E IH ++L+HDDV+D++ RRG + G + +VL GD
Sbjct: 124 PIVGSENKPRARHMRVAEITEMIHISSLIHDDVLDNADTRRGMDSLNFTVGKKLAVLAGD 183
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
FLL +AF + + E + L+ L GEL QL+++ + + YL KTA
Sbjct: 184 FLLFRAFSAAVALDNTEVVSLLATAVNNLVTGELMQLTITPAQRCSMDYYLQKTYYKTAA 243
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L S + + ++++G V+ YG +LGI
Sbjct: 244 LISNSCKAIAVLSGQTTEVQALAYQYGRHLGIV--------------------------- 276
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T PV+ A E + + G N+ +++++ + T A +
Sbjct: 277 ---TAPVLFAM-----EEFPQLREIVEQGFDDPSNVDVVLKYLQKSQGIERTRLLAAEHA 328
Query: 292 QKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
+ A ++ LP S +++L ++ L+R
Sbjct: 329 KLAAVAIDDLPASEDPVVLSSRQALKDLTQKFLRRT 364
>gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421]
gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421]
Length = 349
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 7/305 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDN 63
+ ++KV I +++C + + + + +GGK +RP+ L A + E
Sbjct: 35 ILKPSLQKVLNCIERQLCFADPNVNESLIEFLHAGGKLIRPVFFLLFAHLGEETFDSDPA 94
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A A+E +H ATL+HDD++D+S LRRG + + + G +V GD+LL+ F ++ +
Sbjct: 95 IIETAAALELLHMATLVHDDIIDNSPLRRGIASIQNIHGKSIAVYAGDYLLTVFFTLIAK 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S + L S + K I +
Sbjct: 155 NISDKELLVQSAASMQRLLEGELHQYRMKFNPEITVSDYFQIIEGKTAELFYLSCYLGIS 214
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ ++ K G N+G AFQ++DD+LDY + ++ ED G +LP
Sbjct: 215 FAKNKTYQEQAKRIGKNIGCAFQIIDDILDYDNLPQKKNIHVREDLAQGVYSLP----LI 270
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +++K+ + K S E L + + + + + A Y + A ++ LPD
Sbjct: 271 LAMEENPDYFKNNPHPDKKSQEYLAYIADGVEKLQGVQKAQAYAKKYSEAALKDIQELPD 330
Query: 304 SSWKK 308
KK
Sbjct: 331 GITKK 335
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 124/323 (38%), Gaps = 54/323 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ + + + + + + + ++Y + +GGKR+RP+L+ A + + +
Sbjct: 13 LALIESFLEQNLPATNCAPARLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAAS 72
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------- 118
A+E IH +L+HDD +D+ LRRGK + +G T++LVGD L S AF
Sbjct: 73 AAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESAL 132
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A + + +A G+ L E I A++ +A +
Sbjct: 133 TEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVI 192
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + + L + +G+AFQ+VDD+LD +GK G+D N KPT
Sbjct: 193 LGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDDILDAEASTAALGKTAGKDAENNKPTYV 252
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
IL + A+ ++A
Sbjct: 253 SIL--------------------------------------GIKQARELAHELQREASGV 274
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L + + L ++ DF +QR
Sbjct: 275 LDKFGPEALR--LQQITDFIVQR 295
>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
Length = 297
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 127/334 (38%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + +++N + +++ + + D + Y + GGKR+RP L AT ML
Sbjct: 4 DLFAELSQYQQRINHFLSEQLSQYPAYNTPLIDAMSYAVLLGGKRVRPFLIYATGKMLGV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E IH +L+HDD+ LRRGK + + T++L GD L S A
Sbjct: 64 PLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILAGDALQSFA 123
Query: 118 FCMVIETKS-------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ S + S++ + ++ + ++KT
Sbjct: 124 FELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELERIHRNKTG 183
Query: 171 VLFSAALEVSSL--IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ + + ++Q L Y +G+AFQ+ DD+LD G +GK G D
Sbjct: 184 ALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIGNSEVIGKTAGSD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 244 QALDKSTYPKLL--------------------------------------GLEGAKQKAE 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S Q A +L LP +L + +F ++R N
Sbjct: 266 SLYQTALKALETLP--FDTTALAALAEFIVKREN 297
>gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380]
gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380]
Length = 296
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 55/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + +V+ + + + + + ++Y F+ GKR+RP+L +A +
Sbjct: 2 DLNAYLKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAGKRIRPILMMAACEAVGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + ACA+E IHT +L+HDD+ RRG+ V+G+ ++L GD LL++A
Sbjct: 62 TVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLTEA 121
Query: 118 FC----------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + +E + + + G S+ ++ ++
Sbjct: 122 FILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIHTR 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A+++ +++ G + L Y G+AFQ+ DD+LD G+ +GK++G
Sbjct: 182 KTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDVGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L RA
Sbjct: 242 DQERGKATYP----------------------------------ALL----GLDAARDRA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +SL + + + L + + + R
Sbjct: 264 KELRDVALESLSGFDERA--EPLRSIAHYIVDRS 295
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/337 (22%), Positives = 129/337 (38%), Gaps = 58/337 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALML 57
L + + + + + S E + D ++Y + GGKRLRP+L +A +
Sbjct: 32 DLRAWSAGQLAAIERALSCWVASPDEAPAPAGLCDAMRYAVLDGGKRLRPLLVMAACAAV 91
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ACAIE IH +L+HDD +D+ LRRGK + +G ++L GD L +
Sbjct: 92 NGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGDALQA 151
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKS 167
AF ++ + + LA+ Q +T + +
Sbjct: 152 LAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQLHEMHRL 211
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + + + AL+ YG +G+AFQ+VDD+LD + +GK G+
Sbjct: 212 KTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAATLGKTAGK 271
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT ++ L + A
Sbjct: 272 DAAQDKPTFVSLM--------------------------------------GLQASRAYA 293
Query: 288 YSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+A SL L ++ ++L + D + R +
Sbjct: 294 QQLHAQALASLRASGLENT---QALQALADMLVNRQH 327
>gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
Length = 326
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 7/304 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64
+ + + LI + + + E I + + L SGGK LRP + +
Sbjct: 11 VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFTQLGDEEKQEKQQL 70
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +A ++E +H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ +
Sbjct: 71 LKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADA 130
Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 131 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 191 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 251 AAPDVFSPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 307
Query: 304 SSWK 307
+ K
Sbjct: 308 GTAK 311
>gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
Length = 368
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 80/333 (24%), Positives = 131/333 (39%), Gaps = 33/333 (9%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFI 74
L ++ +D + + + SGGKR+R +L + ++ + A+E
Sbjct: 35 LTQLSADTSDLMTAWR-SLTSGGKRVRALLMYHVFRGIESGRSGLSDEDLYGVGAALELF 93
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQT-------------------------SVLV 109
A L HDDV+D S RRG+ V+ +
Sbjct: 94 QAAALFHDDVMDRSDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASE 153
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
F + A +V Q+ + D + L VI +KT
Sbjct: 154 QLFRSATAPGQHRSRARDHFDAMRMIVTVGQFMDTHAQVVPLSDDDDAMQRALDVIATKT 213
Query: 170 AVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A L + + +AG V + L+++G LG AFQL+DD L G+ + GK G+D
Sbjct: 214 THYSVVAPLLIGAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDLGLYGDPAQTGKPSGDD 273
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
R GK T+ +I A +R + E++ S I + + +A I+ + A T RA
Sbjct: 274 LREGKRTVVLIEALRRASHAEQHTLGSVIVGDHHDEDTIAQALDIIESSGARQATLDRAR 333
Query: 289 SYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQR 320
+ KA +L + S ++ L + DF LQR
Sbjct: 334 AAHDKALRALDKVELSADSRQHLRTMTDFILQR 366
>gi|3128225|gb|AAC26705.1| putative trans-prenyltransferase [Arabidopsis thaliana]
Length = 297
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 115/304 (37%), Gaps = 20/304 (6%)
Query: 25 SDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
++V + +Y G GK+ R + L A L R ++ +
Sbjct: 4 AEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQR 63
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
+ + + + + G L+ + + L+ L
Sbjct: 64 GIAEITEMIHVASLLHDDVLDDADTRRGVGSLNV-------VMGNKVVALLATAVEHLVT 116
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
GE +++ S + + Y+ KTA L S + + +++ G V YG NLG
Sbjct: 117 GETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLG 176
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQL+DD+LD+ G +GK D R+G T P++ A E + ++ +
Sbjct: 177 LAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAM-----EEFPQLREVVDQVEK 231
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS------WKKSLMEVVDF 316
N+ A + +++ + A + A ++ LP++ +++L+++
Sbjct: 232 DPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHR 291
Query: 317 CLQR 320
+ R
Sbjct: 292 VITR 295
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 52/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + D E V I K + + + I + + Y + GGKRLRP+L + T + +
Sbjct: 2 DIKTIMQDDKEIVERHIKKIMDIKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDI 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ++ +AC +E IHT +L+HDD+ +D+ LRRGK +V+G ++L GD LL+ +
Sbjct: 62 DFEQYLNIACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLS 121
Query: 118 FCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ ++ + + + L G +++N ++ E+ ++ +KT
Sbjct: 122 YEVLFDFLYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L A++ ++ I+ L+SY N+G+AFQ+ DD+LD G+ +GK+IG+D
Sbjct: 182 AKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDE 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P L +++ + +
Sbjct: 242 QYGKNTYPKYF--------------------------------------GLEESKIKLKN 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y AK + + DS + +E+ D+ R
Sbjct: 264 YIDNAKREISKI-DSKNIEFFVELADYVGNR 293
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/324 (19%), Positives = 113/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ + ++R +
Sbjct: 274 SPFD--TAAEPLRQLARYIVERRH 295
>gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1]
gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1]
Length = 293
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 125/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + +V+ + +R + + ++Y GGKR+RP L + M
Sbjct: 1 MLASTIQEYQLRVDTQLKQRFSTLEDTAPQLKAAMQYGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 TLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + Q + ++ +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190]
Length = 298
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G ++L GD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTEL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
Length = 380
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ I + V Y GGK +RP L + +A ++ + +
Sbjct: 56 LRAAIDRLAPPMDTVAAYHFGWIDAQGRPAAGDGGKAVRPALAVLSAEVMSAAPETGIPG 115
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A M +
Sbjct: 116 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEMLLELGTV 175
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A + +++
Sbjct: 176 EAGRATRRLTTATRALIDGQAQDISYEHRDRVTVEECLEMEGNKTGALLACASSIGAVLG 235
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 236 GADDRTADTLERYGYHLGLAFQAVDDLLGIWGDPDSTGKQTWSDLRQRKKSLPVVAALAA 295
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 296 GGSASERLGEILAADAKSSDFENFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEAL 355
Query: 299 RCL--PDSSWKKSLMEVVDFCLQRL 321
+ PD ++ + DF + R
Sbjct: 356 DAIDMPD-RVREQFTALADFVVVRK 379
>gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Olsenella uli DSM 7084]
gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Olsenella uli DSM 7084]
Length = 355
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 10/295 (3%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
+ SGGKR RP L L + + + A IE +A L+HDD+ D+ LRRG+
Sbjct: 60 FVASGGKRTRPALVLLGCEAVGGDVERALSSAAGIEHFQSAALIHDDIADEGELRRGEPC 119
Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ--------L 148
L G ++ GD + + F V+E + + L ++A +
Sbjct: 120 TYLTEGLGVAINTGDLGIVRTFADVLEDDALDPTTKLRVLAELAQMEQRTVEGQALDLGW 179
Query: 149 SLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
DV+ DYL + + KTA S+ L + ++ G + AL S+GM+ G+AFQL
Sbjct: 180 VRDGRWDVSTSDYLRMARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDAGLAFQL 239
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+L+ G+ GK+ D GK T+ V + +R +++ + ++ L
Sbjct: 240 QDDLLNLVGDATAQGKDFRSDITEGKRTMVVAWSLERLEGQDREELVALLSAHTTDPTQL 299
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+A +MR+ A+ A + AK L + + L + DF ++RL
Sbjct: 300 ARAVGLMRDCGAIDAVGGYARALADHAKGELDGMDFAGHAVEVLDSMADFFVERL 354
>gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
Length = 300
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 78/336 (23%), Positives = 133/336 (39%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + +++N + I + + D +KY + GGKR+RP L AT ML
Sbjct: 5 MYQFSNDLQQAQQRINRFLEAQFDEINTRPSPLADAMKYGLLLGGKRIRPFLVYATGRML 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A AIE IH +L+HDD+ LRRG+ + + + T++L GD L +
Sbjct: 65 GADTAQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDHATAILAGDALQA 124
Query: 116 QAFCMVIETKS---------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ ++ + + L S V L +S K + ++E + +H K
Sbjct: 125 FAFEILTKSTALSAEQKLRLIQVLSHNSGVFGMCLGQSLDLISEHKQISLSELEQIHRNK 184
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ + + + N++ L Y +G+AFQ+ DD+LD G++ +GKN+G
Sbjct: 185 TGALLSAALKMGFICSSHFADNALEAKLDRYAAAIGLAFQVQDDILDIEGDLAAIGKNVG 244
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D + K T P +L L + +
Sbjct: 245 SDLESDKSTYPKLL--------------------------------------GLAGAKQK 266
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A L LP +L + +F + R N
Sbjct: 267 ARELYVAAVGELEHLP--FDTTALRALAEFIINRKN 300
>gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 56/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ ++ + + V + + + E + + + Y + +GGKRLRP+LTLATA L
Sbjct: 1 MEEIQRYLKEKAKSVEARLKEYMERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEAL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IHT +L+HDD+ RRG ++G ++L GD LL+
Sbjct: 61 GGDEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLT 120
Query: 116 QAFCMV----------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+AF ++ +T E G + + +V+ E+ +
Sbjct: 121 RAFDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+SKT L + ++ + +++ G QAL Y LG+AFQ+ DDVLD G+ ++GK +
Sbjct: 181 RSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D K T P +L L +
Sbjct: 241 GSDEVKNKSTYPSLL--------------------------------------GLDSSRE 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQR 320
R S ++AK + + + L+ + D+ R
Sbjct: 263 RIRSLVEEAKQLITA--QERIRPARLLAIADYLTVR 296
>gi|289811565|ref|ZP_06542194.1| hypothetical protein Salmonellaentericaenterica_47552 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 77
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62
Query: 61 GDNHVLLACAIEFIH 75
G+ HV +A IEFIH
Sbjct: 63 GNAHVTIAALIEFIH 77
>gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 364
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 122/332 (36%), Gaps = 31/332 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTAT 78
I D+E + + L+ +GGKRLR ++ V A+E A
Sbjct: 34 SAISPDIEPLMGSISNLV-TGGKRLRALMCYWGWRGAGGEPAAQQIVAAGAALELFQAAA 92
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVL----------------VGDFLLSQAFCMVI 122
L+HDD++D S RRG + + GD LS +
Sbjct: 93 LIHDDIIDRSDTRRGGPSVHRRFTELHGSRGWALDSERFGQAAAILTGDLCLSFSEEAFT 152
Query: 123 ETKSQ---------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--KSKTAV 171
+ + + V L +++ I
Sbjct: 153 DIGERAAAGSRARLIFNLMRAEVMAGQYLDILEEVAGPVRDRAGAVSRAQSIIRFKSAKY 212
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + +AG + + + ++ + LG AFQL DDVL G+ GK G+D R
Sbjct: 213 STEHPLALGGALAGASDELLRGYSAFALPLGEAFQLRDDVLGVFGDPLTTGKPAGDDLRE 272
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T+ V LA + + E F + + +S E++ + I+ E+ AL TE +G
Sbjct: 273 GKRTVLVALALDQASPAESAFIDARLGSPDLSAEDIHELRRIIEESGALAATEVLINEFG 332
Query: 292 QKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
A +L LP D K +L + + + R +
Sbjct: 333 AAAFVALEALPLDELPKTALRRLAEATVSRAS 364
>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
Length = 296
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S ++ + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNALLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFVITRKS 296
>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
Length = 296
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 54/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + V ++ + + I + + Y + +GGKRLRPML L T +
Sbjct: 1 MNNFDTELKERTAYVEKIVYDYCPKEEGLQKIIIEAMNYSLKAGGKRLRPMLVLETLRLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A+E IHT +L+HDD+ RRGK V+G +L GD LL+
Sbjct: 61 GGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDNDMYRRGKKTTHAVYGEDIGILAGDGLLN 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---------IK 166
A+ + + + +A + + + V + K
Sbjct: 121 MAYETMSMAILKSKYPQRAALAMNILAYKAGIYGMIGGQTVDVINENKEKDIDTINFIHK 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L A+ V +++AGV + ++ N+GIAFQ+ DD+LD G + E+GK +
Sbjct: 181 LKTAALIEGAMMVGAILAGVDEQAVETVEEIATNVGIAFQIQDDILDVTGTLEELGKPVL 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D +N K T + + + +++
Sbjct: 241 SDEKNNKTTYVTL--------------------------------------KGIDESKRL 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
Y +KA + L L + L ++ + R+
Sbjct: 263 VEDYSEKAVNLLESL--GEDSEFLKNLIIKLINRV 295
>gi|297562051|ref|YP_003681025.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846499|gb|ADH68519.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 360
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 77/326 (23%), Positives = 123/326 (37%), Gaps = 28/326 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATL 79
I ++ D ++ +I SGGKRLRP + V A ++EF+ L
Sbjct: 36 EIGEELAPAMDALEAMI-SGGKRLRPTFCYWGWRGAGGAAEDERVVRAAASLEFLQACAL 94
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTS----------------VLVGDFLLSQAFCMVIE 123
+HDDV+D+S RRG A + +L+GD L+ + M
Sbjct: 95 VHDDVIDNSDTRRGLPATHKRLAKLHADQGWSGDSEGFGQGAAILIGDLCLAWSDEMYQA 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + E+ L+ + SA V +
Sbjct: 155 SGFPTEVLGRGRPPFDAMRTEVMAGQYLDTLEQVRGTGTREAALRVMRYKSAKYTVERPL 214
Query: 184 A------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
G + YG+ LGIAFQL DDVL G+ + GK G+D R GK TL
Sbjct: 215 HLGAALAGRHGELAGVYTDYGIPLGIAFQLRDDVLGVFGDPSTTGKPAGDDLREGKRTLV 274
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V R + ++S + +SV +++ ++ + AL E Y +A +
Sbjct: 275 VAETLARAGAADAERFRSLLGAPDLSVASVEWMCSLIEGSGALAACEEMIAEYADRAVAA 334
Query: 298 LRCLP--DSSWKKSLMEVVDFCLQRL 321
L P D+S ++ L ++V R
Sbjct: 335 LES-PELDASAREPLRQLVVAATSRS 359
>gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 344
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 20/329 (6%)
Query: 12 MEKVNFLI----LKRICSDVEMIPDVVKYLI----------FSGGKRLRPMLTLATALML 57
M + LI + + E I +V Y I GK +RP L +A A +
Sbjct: 14 MAEARELISPLHRATVDALPEEISHIVGYHIGWWDANGRPCEQKGKYVRPTLAVACARAI 73
Query: 58 EYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A A+E +H +LLHDDV+D+ +RR + A ++G +VL GD L++
Sbjct: 74 GGEAAVKSAIPVAVAVELVHDFSLLHDDVMDEGTVRRHRPTAWSLFGTSKAVLAGDLLVA 133
Query: 116 QAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+A+ + ++ L+ L G+ L+ ++VT + ++ KT+ L
Sbjct: 134 EAYRLLASSGCDDPERLVKILAQAVHDLCVGQAMDLAFEDRVEVTLAETNAMVSGKTSAL 193
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+AA E+ +L AG + ++G +LG+ FQLVDD+L G+ GK +G D +
Sbjct: 194 IAAACELGALTAGADAEAAAVMCAFGGHLGMLFQLVDDILGVWGDPGVTGKPVGADVASR 253
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K +LPV+ A + GT ++ + ++ E++ KA + E E A Q
Sbjct: 254 KKSLPVVAALEAGTDASRSLAALYRSADPLTSEDVAKATQWVEEAGGRAWAEAEATRLRQ 313
Query: 293 KAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
A+D L + D+ L+ ++ F ++R
Sbjct: 314 AAQDCLEQVGADAWAFNDLLSLMRFLVER 342
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN + + + I + ++Y + S GKR+RPML LA ++ + + ACA
Sbjct: 59 KSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACA 118
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-----VIE 123
IE +H ++L+ DD +D+ +LRRGK +V+G ++L L++ A +
Sbjct: 119 IEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFAD 178
Query: 124 TKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L+ + + + Q + + + D E + KTA L AA
Sbjct: 179 VPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAA 238
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ G + + L+SY +G+ FQ+VDDVLD E+GK G+D GK T P
Sbjct: 239 VMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYP 298
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + ++ A +A++
Sbjct: 299 RLM--------------------------------------GVEKSKEYAERLNIEAREH 320
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L D L+ + D+ + R N
Sbjct: 321 LLGF-DIDKVAPLVSLADYIVNRQN 344
>gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
30120]
gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
30120]
Length = 305
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 73/326 (22%), Positives = 116/326 (35%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN +L + S + +KY GGKRLRP LT A ML DN A
Sbjct: 18 DRVNQYLLTSLDSLPFADLPLAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSLDNLDAPAA 77
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + +G +VL GD L + AF ++
Sbjct: 78 AVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSASMP 137
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + + G+ L A++ +A
Sbjct: 138 DVSDKDRIAMIAELAYASGLAGMCGGQALDLDAEGKRVDLVSLERIHQHKTGALIRAAIR 197
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L Y ++G+AFQ+ DD+LD G+ GK G D ++ K T P
Sbjct: 198 LGAYAAGHKGYQALTNLDKYAESIGLAFQVQDDILDVIGDSAVTGKRQGADEQHEKSTYP 257
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + +A Q A +
Sbjct: 258 SLL--------------------------------------GLEAAQEKAKELYQDAITA 279
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQRLN 322
L L L + +F ++R +
Sbjct: 280 LESLQSQGYNTDLLRALANFVIERKS 305
>gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
Length = 296
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESRNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFVITRKS 296
>gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
Length = 296
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + ++Y + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNAPLLEAMEYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + + + + L +S K + + E + +H K+
Sbjct: 125 ILTKTPNISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLNELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L ++ Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
Length = 280
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 15 VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + + + + D + ++ +GGKR+RP +T+ + ++ V A +E
Sbjct: 11 VNDRLEEVVSAVEPSELADQLDHVALAGGKRVRPAVTILACEAVGGTPEDAVDFAVGVEL 70
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H A+L+ DD++D S +RRG +A +G +++ D LL +AF ++ + A
Sbjct: 71 VHNASLVVDDIIDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFALLS-----SSDRAT 125
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+VA ++ E + + + E +Y+ + KT LF AA E+ ++ A V +A
Sbjct: 126 RIVAESMVELGEGEATELVAVPSNEAEYMQLAHRKTGALFRAAAELGAVAASGDAHVVEA 185
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
Y +G+AFQ+ DDVLD + E+GK G+D G+P+L +
Sbjct: 186 FGDYAARVGVAFQIRDDVLDATADAEELGKPTGQDAEMGRPSLVQVTDLTP--------- 236
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLM 311
+ RA +A +L + DS + L
Sbjct: 237 ---------------------------EEANRRARKQADEALSALDDSGVDDSEPLEYLR 269
Query: 312 EVVDFCLQRLN 322
++ +F + R +
Sbjct: 270 DLAEFVIVRES 280
>gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus]
Length = 346
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 15/325 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
+ V + I + + Y GGK +RP L L A +
Sbjct: 22 DTVESALRPAIDRLPPAMRRIAGYHFGWSDERGEPARAGGGKAIRPALVLLAAEAVGGAA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-- 119
D + A A+E H +LLHDDV+D RR + A V+G ++L GD LL+ AF
Sbjct: 82 DAALPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWTVFGVSPAILAGDALLALAFDVL 141
Query: 120 -MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ EA L EG+ ++ + DV + L + KT L A
Sbjct: 142 ATAGHPAAPEATRIFGAAIQELLEGQNADMAFERRQDVELAECLVMAAGKTGALLGCACA 201
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L+ G + L+++G +LG+AFQLVDD+L G+ GK + D R+ K +LP+
Sbjct: 202 LGALLGGGAPEQVEHLRAFGRDLGLAFQLVDDLLGIWGDPQVTGKPVYSDLRSRKKSLPI 261
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A + + + +S +L A ++ ++ +A +A L
Sbjct: 262 VAALTSSSPAGRELAGLYQRERPLSDADLVHAAELVDAVGGRAWSQTQADELLARALHHL 321
Query: 299 RCLPD-SSWKKSLMEVVDFCLQRLN 322
R S L + R +
Sbjct: 322 RSAGSVSRPIAELGTLARLVTHRDH 346
>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
Length = 296
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + D +KY + GGKR+RP L T ML
Sbjct: 5 SEELQQVQTRINRFLETQLEGIESHNAPLLDAMKYALLLGGKRVRPFLVYTTGQMLGAGK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + S + L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L ++ Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 64/322 (19%), Positives = 112/322 (34%), Gaps = 55/322 (17%)
Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLEPAKRYALELRDQALTAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ + L E+ + ++R
Sbjct: 274 SPFD--AAAEPLRELARYIVER 293
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 145/332 (43%), Gaps = 58/332 (17%)
Query: 9 LKDMEK----VNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K++++ + I + + + I + + Y + +GGKRLRP+L + + + +G
Sbjct: 4 KKELKERSIYIEDKIESYLPKEEGYQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQGQG 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ V + A+E IHT +L+HDD+ D+ LRRGK +V+G ++L GD LL+ A+
Sbjct: 64 EDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYE 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTA 170
++ + + +SL A + V ++ ++ +KTA
Sbjct: 124 TMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMNKTA 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ ++ +++AG+ ++L Y N+G+AFQ+VDD+LD G+ +GK +G D
Sbjct: 184 AMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLD 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T P +L + ++ +
Sbjct: 244 NDKSTYPSLL--------------------------------------GIDASKKIVENL 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK SL S + + + DF R N
Sbjct: 266 IEEAKTSLEVF-ASDA-EFMNALADFIRDRQN 295
>gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
87.22]
Length = 409
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 19/325 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATALMLEYRGDN 63
V+ + + + S + V +Y +G GK +RP L LA L R
Sbjct: 87 VDPELRRAVGSLPRSMRRVARYHFGWEDADGTPAAGNAGKAIRPALVLAAVHALGGRESV 146
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H TLLHDDV+D RR + A V+G ++L GD + + A ++ E
Sbjct: 147 AVRAAAAVELVHNFTLLHDDVMDRDTTRRHRATAWTVFGVPDAILAGDAMQALAQRLLAE 206
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSK-----NLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A + +A + E Q + ++ LDVT ++ L + ++KT L A
Sbjct: 207 DPHPASAAAAARLASCVVELCEGQHTDTELEGRPPLDVTLDEVLTMAEAKTGALLGCACA 266
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L AG +AL ++G G+AFQL+DDV+ G+ + GK G D K +LPV
Sbjct: 267 IGALYAGAAEEDVEALDAFGREAGLAFQLIDDVIGIWGDPSRTGKPAGADLMVRKKSLPV 326
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A GT + +L++ + + + +A +A L
Sbjct: 327 VAALASGTPEATELADLYGL--PYAQGDLERTALAVERAGGREWAQVQAADRMARAVREL 384
Query: 299 R-CLPDSSWKKSLMEVVDFCLQRLN 322
+PD L+ + +F +R +
Sbjct: 385 SRAVPDPESAGGLLALAEFVTRRSS 409
>gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 83/334 (24%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 1 MKMLE---DLTLKDMEKV----NFLILKRICS--DVE-MIPDVVKYLIFSGGKRLRPMLT 50
M+ +E + + + ++ + + D + + ++Y +F+GGKRLRP L
Sbjct: 1 MQSIESEAKIAQEYLARIAKDAEAKFDEHLPPVKDRPCRLHEAMRYSMFAGGKRLRPGLA 60
Query: 51 LATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVL 108
AT M +G+ L A+E +HT +L+HDD VD+ RRGK+ + +G T+V+
Sbjct: 61 KATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVM 120
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-S 167
GD L AF M+ +T + +A+E L+ + T + + + + I
Sbjct: 121 AGDALCIHAFEMMGKTGNAKAIELLAHLLGTYGMIGGEMTDIECEGKTVDLEIVDYIHYH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L A+L V +++A + +++YG ++G+AFQ+VDD+LD E+GK+ G
Sbjct: 181 KTAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELGKDAGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P I+ L + RA
Sbjct: 241 DIEKGKATYPSIV--------------------------------------GLEKSRERA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+++ +L L + L + + + R+
Sbjct: 263 RELYEESIKALDGL--TCDTSILRSIAAYIITRV 294
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVETALDHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------C 119
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVL 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + + A+L +A
Sbjct: 131 APAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 297
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 58/333 (17%)
Query: 8 TLKDMEKVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + + + + Y + GGKR+RP L AT ML+
Sbjct: 5 LSTDLSVIQQRINDFLSTKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVP 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S AF
Sbjct: 65 LEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++++ +S + + + L L+ K +++ E + +H K+
Sbjct: 125 ELIVQDESLTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGA 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ S + + + +++Q L+ Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 185 LIIASVLMGFNLSVHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKIGKTVGSDE 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + +A
Sbjct: 245 NLHKSTYPKLL--------------------------------------GLEGAQQKAQD 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP +L E+ F ++R N
Sbjct: 267 LYQTALNALEELP--FDTTALKELAHFIVKREN 297
>gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 317
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 10/308 (3%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK-RLRPMLTLATALMLEYRGDNHVLLAC 69
D+ KV +I R+ ++ + K LR L + A + Y + A
Sbjct: 16 DLAKVEQVIHARMQGR-PIVAQTASAALRGMEKPYLRAALVVLAARLGRYDARRVIHAAA 74
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E IH AT +HD++++++A RRG+ W +++ GD+LL+ A +
Sbjct: 75 AAELIHFATAVHDNLINEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEMALAPDARI 134
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ S V T EG L ++ LD + +V++S+TA LF A V + G ++
Sbjct: 135 ISMYSRVVMTFCEGRLAPVTAVAPLDQALAQHEYVVESRTAALFETAARVGVVCGGSDDT 194
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L +G LG+A + +V DY + G G D R G+ TLP+I A G
Sbjct: 195 LSNTLGRFGRELGMAMHIAAEVRDYEID----GPYAGHDLRAGRITLPLIYAVDAGGGA- 249
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ ++ L A +R R + Q+A D+L +P + +
Sbjct: 250 --DLAAVVDQHAPDTHYLTAAIDQVRRLGVPP-ARARMRDHAQRAMDALAFVPPGDIRNA 306
Query: 310 LMEVVDFC 317
L + D
Sbjct: 307 LGALADRV 314
>gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
Length = 291
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 50/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L VN + R+ + + + Y + +GGKRLRP+L +A A + +G
Sbjct: 2 ELRSYLRSRGALVNGYLQVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAADAVGAKG 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ V +A +E IHT +L+HDD+ RRG++ V+G+ ++L GD LL+QAF
Sbjct: 62 SDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDGLLTQAFE 121
Query: 120 MVIETKSQEALE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+++E + + T G S++ +T E + ++KT +
Sbjct: 122 VMLEQRGVDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKLHEAKTGAM 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F AA+ +++ G + + + G+AFQ+ DD+LD G+ MGK D +
Sbjct: 182 FVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAKVMGKPAHSDEKLH 241
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T + L A +
Sbjct: 242 KSTYVSLF--------------------------------------GLEKAREMAAQTLK 263
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A+++L L + L+E+ + R
Sbjct: 264 EAEETLAPL--GEKAQPLVEITRYLYNRK 290
>gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
Length = 293
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 126/331 (38%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + +V+ + +R + + ++Y GGKR+RP L + M
Sbjct: 1 MLASTIQEYQLRVDTQLKQRFSTLEDTAPQLKAAMQYGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 TLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + ++ +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32]
gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32]
Length = 293
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 127/331 (38%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + +V+ + +R + + ++Y GGKR+RP L + M
Sbjct: 1 MLASTIQEYQLRVDTQLKQRFSTLEDTAPQLKAAMQYGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 TLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E S + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + ++ +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
K279a]
gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
K279a]
Length = 292
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/328 (16%), Positives = 107/328 (32%), Gaps = 53/328 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L + +++ + + S E + ++Y + GGKR+RP+L A+ + + ++
Sbjct: 6 LFARWRDRIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGTQPES 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLL 114
A ++E IH +L+HDD+ + LL
Sbjct: 66 LDAAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRAFGLL 125
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ A + A + A + G+ + + + KT L
Sbjct: 126 ADAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALT-RMHALKTGALIR 184
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA+ + +L L S+ LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 185 AAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKS 244
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P ++ + + + + +
Sbjct: 245 TFP----------------------------------ALL----GMDGAKAQLHELAARM 266
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L +L + ++R +
Sbjct: 267 QSILARY--GEEADALRALATLAVERDH 292
>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 301
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 67/330 (20%), Positives = 129/330 (39%), Gaps = 60/330 (18%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++V+ + ++ + + + ++Y +F+GGKR+RPML ATA + A A
Sbjct: 12 DRVDRYLNDQLTQYDAADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNRLTDASAAA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IH +L+H +DD LRRGK + + T++L GD L + AF ++ + ++
Sbjct: 72 IESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFELLSASYNEI 131
Query: 129 ALEALSLVACT----------------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ L+ + G++ L+ E A++
Sbjct: 132 DTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMHQHKTGALI 191
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
++ L + + + L Y +G+AFQ+ DD++D + +GKN D
Sbjct: 192 RASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGKNQFSDSEAN 251
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
KPT P +L L +A + Q
Sbjct: 252 KPTYPKLL--------------------------------------GLEGAREKANTLKQ 273
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +++ D + L+++ + + R +
Sbjct: 274 EAIEAISPFGDKAA--PLIQLASYIISRNH 301
>gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 201
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 98/198 (49%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ ++ + S V ++ + Y++ GK++RPM +A +
Sbjct: 4 LNDIQKPIANELAAFEHKFKASMQSSVPLLDRITHYIVKRKGKQMRPMFVFFSAGLCGSI 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++ A +E +HTA+L+HDDVVD++ RRG + +W N+ +VLVGDFLLS+ +
Sbjct: 64 NESTFRGASLVELLHTASLVHDDVVDNANERRGFFSVNALWKNKVAVLVGDFLLSKGLLL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ L+ +S ++EGEL Q+ ++ LD+ E Y VI+ KTA L ++
Sbjct: 124 SVDNNDFHLLKIVSEAVEQMSEGELLQIEKARKLDIEESVYFEVIRQKTASLIASCCACG 183
Query: 181 SLIAGVQNSVRQALKSYG 198
+ V + +
Sbjct: 184 AASTDVDARNCKKNACFR 201
>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ + + +V + + + + + + Y + +GGKRLRP+L L+TA +
Sbjct: 8 QQVKTILAERGAQVEAYLQHCLDAIPMQGRLKEAMYYSLLAGGKRLRPVLCLSTAALFGL 67
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A ++E IHT +L+H +DD LRRG+ + + T++L GD LL+ A
Sbjct: 68 SAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAGDALLTDA 127
Query: 118 FCMVIETKSQEA---------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F + T + + + + G++ + + +V E + K
Sbjct: 128 FGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDCTGKTNVPLETLQTLHALK 187
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T +F A L+AG S +L++YG LG+ FQ+VDD+LD + +GK G D
Sbjct: 188 TGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETADTATLGKPAGSD 247
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P ++ L + A
Sbjct: 248 AEMGKTTYPSLM--------------------------------------GLDRSRELAQ 269
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +KA DSL L + + R
Sbjct: 270 EFAEKAVDSLSAFSGQDA-AFLKGLALMLVTR 300
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
LE + + + ++ I + ++Y + S GKR+RP+L +A A + +
Sbjct: 23 DLESYFAEKTKTIKNELINIINKSNSFGQLSKAMEYSLISEGKRIRPILCIAAAESVGGK 82
Query: 61 GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACAIE IHT +L+HDD+ D+ LRRGK + T++L GD LL+ AF
Sbjct: 83 QSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDALLTLAF 142
Query: 119 CMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ E + AL + + S+N + + K
Sbjct: 143 QVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLNKLEELHILK 202
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++E +++A + LK Y +G+AFQ+ DD+L+ G+ GK +G D
Sbjct: 203 TGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPTITGKPVGTD 262
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L + ++E A
Sbjct: 263 NVRKKSTYPSLL--------------------------------------GIDESENYAK 284
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A +L + S L + + ++R
Sbjct: 285 KLIKEALHALAIFDNKS--DPLRAIALYIIER 314
>gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
Length = 242
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 134/221 (60%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +
Sbjct: 16 LLAPIASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQ 75
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++
Sbjct: 76 KHVLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVG 135
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++
Sbjct: 136 VGKMRVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVL 195
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
AG A YG +G AFQ++DD LDY G MGKN
Sbjct: 196 AGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKN 236
>gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48]
gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48]
Length = 295
Score = 88.9 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 63/325 (19%), Positives = 118/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + ++E + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEPLFQAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------- 118
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLS 130
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A + + G+ L + A++ ++
Sbjct: 131 PQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A + + AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYALELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ +++ + L + + ++R +
Sbjct: 273 LQGFGENA--EPLRALARYIVERRH 295
>gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 88.9 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ VN + + + I + ++Y + S GKR+RPML LA ++ + + ACA
Sbjct: 59 KSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACA 118
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-----VIE 123
IE +H ++L+ DD +D+ +LRRGK +V+G ++L L++ A +
Sbjct: 119 IEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFAD 178
Query: 124 TKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L+ + + + Q + + + D E + KTA L AA
Sbjct: 179 VPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAA 238
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ G + + L+SY +G+ FQ+VDDVLD E+GK G+D GK T P
Sbjct: 239 VMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYP 298
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + ++ A +A++
Sbjct: 299 RLM--------------------------------------GVEKSKEYAERLNIEAREH 320
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L D L+ + D+ + R N
Sbjct: 321 LLGF-DIDKVAPLVSLADYIVNRQN 344
>gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 353
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 66/350 (18%), Positives = 121/350 (34%), Gaps = 35/350 (10%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTL---ATALMLEY 59
L +++ V + + S + I ++ GGKRLR L L +
Sbjct: 2 KLVEDNLKTVFSKLREEASSVSPLTYDIIEIASDYTLRGGKRLRAFLALVGYWSREWGSG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ IE + + L+HDDV+D LRRG + ++ + +
Sbjct: 62 DLATITNVMSGIELLQSYLLIHDDVMDRDELRRGGPTVHAWFRDKCLKEMKGDCVHYGDS 121
Query: 120 MVIETKSQEALEALSLVA--------------------CTLAEGELRQLSLSKNLDVTEE 159
I A+ ++ +A G+ + LS
Sbjct: 122 QAITVGDYLEATAVEYISRANLPGETLRRLLETYSRGLRMVAYGQYLDVLLSNKPLGNVS 181
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL----KSYGMNLGIAFQLVDDVLDYR 215
+ ++ L + + SY + GIAFQL DD++
Sbjct: 182 ERDVLLVHTLKTASYTIELPLHLGVIASGKYSEKILRELTSYAIPAGIAFQLRDDIIGLY 241
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI---NDGKISVENLKKAFI 272
G+ + GK +G D R K TL V+ A++ G + + +++ E++K
Sbjct: 242 GDPRQTGKPVGSDVRGKKKTLLVVKAYELGDREVRRRLSEIYDVLRTNEVTQEHVKFVQE 301
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK--KSLMEVVDFCLQR 320
I+RE +L E Y + A +L + S + L +++ R
Sbjct: 302 IVRETGSLEYNEELIKKYVENALKALEESKEISAQAVNILKWLLEKLAYR 351
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 54/322 (16%)
Query: 13 EKVNFLILKRIC-SDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
V + + + ++V + ++Y + GGKR+RP+L A + + A
Sbjct: 17 ALVEEALNRLLPPAEVAPQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAA 76
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRGK + + T++L GD L S AF ++ E +
Sbjct: 77 ALELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVA 136
Query: 128 EALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ + + +A G+ L + E I A++ ++ +
Sbjct: 137 DSPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVIL 196
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ + + L + +G+AFQ+VDDVLD + +GK G+D R GKPT
Sbjct: 197 GANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYV- 255
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++A +SL
Sbjct: 256 -------------------------------------STVGVEAARAMAQELKREAVESL 278
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ + + L E+ ++ + R
Sbjct: 279 APFGERARR--LRELAEYIVSR 298
>gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175]
Length = 293
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 125/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + ++V+ + +R + + + Y GGKR+RP L + M
Sbjct: 1 MLVSAIQEFQQRVDNQLKQRFSTLEDTAPQLKAAMTYGALLGGKRIRPFLVYSVGRMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 ELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E + E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A A+ + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGKPQGSDT 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAQDTAKQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
Length = 297
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 138/334 (41%), Gaps = 58/334 (17%)
Query: 7 LTLKDM----EKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L D+ +++N + +++ + + + + Y + GGKR+RP L AT ML
Sbjct: 4 LLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLLGGKRVRPFLIYATGRMLGV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S A
Sbjct: 64 PLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILAGDALQSFA 123
Query: 118 FCMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ E + V L ++ +K + + E + +H K+
Sbjct: 124 FELLATDPHLTDREKVVQVTELATASGAKGMCLGQSLDLIAENKAVSLEELELIHRNKTG 183
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+L S + ++ +++Q L +Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 184 ALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETDKIGKIVGSD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 244 EHLNKSTYPKLL--------------------------------------GLDGAKQKAE 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A SL LP +L E+ +F ++R N
Sbjct: 266 MLYQTALHSLEQLP--FDTTALKELANFIVKREN 297
>gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440]
gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440]
Length = 295
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 120/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++E + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + ++L GD L S AF +++
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLS 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++++ L + G+ L + A++ ++
Sbjct: 131 PQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYAIELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ + L + + ++R N
Sbjct: 273 LQGF--GEKAEPLRALARYIVERRN 295
>gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945]
gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02]
gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140]
gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19]
gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1]
gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332]
gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035]
gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945]
gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 298
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 128/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
Length = 296
Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
Length = 292
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y + GGKRLRPML LA + + E D
Sbjct: 10 AQTELLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMA 69
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF ++
Sbjct: 70 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTEL 129
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ + A++ +A +
Sbjct: 130 PAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLG 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 190 SMSCPNLSEDSLAILDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 249
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 250 M--------------------------------------GLEAARPYAHKLVAEAVALLE 271
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L ++ +F + R
Sbjct: 272 PFGNKALR--LRQLAEFTIART 291
>gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 343
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 73/299 (24%), Positives = 116/299 (38%), Gaps = 17/299 (5%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
I GK +RP L L + LA I+ +H +L+HDD+ DDSA+RRG+
Sbjct: 47 AIADPGKLIRPQLVLLACTAAGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSAMRRGRRT 106
Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--------EALSLVACTLAEGELRQL 148
+WG + GD + A + V + EG+ L
Sbjct: 107 LWHIWGLAHGINAGDAMFVIAHLAIHRLADVGVPAERVLAILRRFDEVILRICEGQYLDL 166
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
S +L +T +DYL +I KTA L + A E+ + +AG + AL +G LG+ FQ+
Sbjct: 167 SFEGDLSITPDDYLTMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQIE 226
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD+L G GK D K +LP++ A R + +
Sbjct: 227 DDILGIWGAPERTGKPFAADLYRRKVSLPIVHALTHSPDR--ERLAELYRRPTLDDAAVT 284
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
+ I+ + A + Q A +L + S ++ L + + R
Sbjct: 285 EVLAILDHAGSRAYCAAIANEHHQAAFTALAAV-QSPTPAAVAARERLHALTQSLIGRQ 342
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM- 56
L +V L+ +R+ + + ++Y + +GGKRLRP+L LA A +
Sbjct: 5 QLNSFLAAQQARVEALLNERVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFADLV 64
Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112
ACA+E++HT +L+HDD+ +D+ RRG++ V+G ++L GD
Sbjct: 65 ARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAGDA 124
Query: 113 LLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
LL++AF +V L++ + + L +++ + + + + KT
Sbjct: 125 LLTEAFTLVASGPESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDYLIRMHRMKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L AA + L +G +YG +G+AFQ+ DDVLD E+GK G D
Sbjct: 185 GALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAAELGKPAGADA 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
G+ T P ++ L + A
Sbjct: 245 AAGRFTFPAVV--------------------------------------GLEASRTLADQ 266
Query: 290 YGQKAKDSLRCL--PDSSWKKSLMEVVDFCLQRLN 322
+A ++R L D L + + ++R +
Sbjct: 267 KVAEAIAAVRPLEGEDGP----LAALARYTVERKS 297
>gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201]
gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201]
Length = 370
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 120/339 (35%), Gaps = 33/339 (9%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLACAI 71
V + I D + D V L GGKRLR L D V A ++
Sbjct: 31 AVEREHVTAISPDATRLVDAVGQLTE-GGKRLRARLCHWGWRAAGGEAGSDVVVAAAASL 89
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGN-----------------------QTSVL 108
E TA L+HDD++D S RRG+ + V+ S+
Sbjct: 90 ELFQTAALIHDDILDRSDTRRGRPSVHRVFEALHRESGWAADPAHFGVSAAVLTGDMSLS 149
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ L + A V A E S + + G+ + E
Sbjct: 150 FAEQLFADAAARVAPQAGARAREIFSTMRTEVMAGQYLDIHAEVAPPAAEPARQLERAMT 209
Query: 169 TAVLFSAALEVSSLIAG------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
SA V +A + +A ++ + LG AFQL DDVL G+ G
Sbjct: 210 VLRYKSAKYSVEHPVAIGAALAGADEAFLRACAAFTLPLGEAFQLRDDVLGVFGDPETTG 269
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D R GK T V L +R T ++ + +S + ++ ++ + +M A
Sbjct: 270 KPAGDDVREGKRTALVALCEERATPSQRAWLESVLGRADLAGTDVARVRELMHSTGAHER 329
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
+E + A L LP + L + D ++R
Sbjct: 330 SEQLIAQLVRDADAGLAALPTGPVPRAGLQALADAAVRR 368
>gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVETALEYYLPTEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVL 130
Query: 121 -VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + + A+L +A
Sbjct: 131 APAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 295
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEGLFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEV 179
L + + + ++ + KT L A++ +
Sbjct: 132 RDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVWL 191
Query: 180 SS-LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLDAAKGYALELRDQALAAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 SPFD--AAAEPLRELARYIVERRH 295
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
Length = 295
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/325 (19%), Positives = 118/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++ + + ++Y + +GGKR+RP+L A L + + AC
Sbjct: 11 ARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALS 130
Query: 120 --MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A + + G+ L + A++ ++ +
Sbjct: 131 DASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVI 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + +AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLAAAKEYALELRDQALHA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
LR + + L E+ + ++R +
Sbjct: 273 LRPFD--AAAEPLRELARYIVERRS 295
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 70/331 (21%), Positives = 123/331 (37%), Gaps = 63/331 (19%)
Query: 15 VNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
V + R+ + + + ++Y + GGKR+RP+L A ++
Sbjct: 32 VEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDG 91
Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---- 120
ACA+E IH +L+HDD+ +D+ +RRGK +G ++LVGD L + AF +
Sbjct: 92 AACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAP 151
Query: 121 ---------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + A+ A + + +A G+ + + A+
Sbjct: 152 LVEADPQAARVPAATMVAVLARAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKTGAM 211
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + + +A++ YG +G+AFQ+VDD+LD + +GK G+D
Sbjct: 212 LSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKDQAQ 271
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
KPT +L L A
Sbjct: 272 DKPTYVSLL--------------------------------------GLEGARALATDLH 293
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L+ L L + DF ++RL+
Sbjct: 294 AQAHACLQAL--GPRADRLRMLADFIVERLH 322
>gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18]
gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18]
gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136]
Length = 298
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 130/322 (40%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G ++L GD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTEL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni]
gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni]
Length = 409
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 34/348 (9%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L LKD+ + I +C + D+++Y S GK +RP+L A
Sbjct: 65 KELLQNALKDLHLIVSEIKHSLCPAFPVFRDLLRYQFESQGKLVRPLLVTLAAACANSHI 124
Query: 62 D--------------------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+ +A E IHTA+L+HDD++D +A+RRGK
Sbjct: 125 ECNSPLIVRYESPETDDVRNLAYLVSPKQHEIAKIAEMIHTASLIHDDLIDSAAVRRGKT 184
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
+A +G++ +VL GDF+L+ + ++ + + LS V L GE+ QL+ + + D
Sbjct: 185 SAYKAFGHREAVLGGDFILTHSSRLLAQIGDTGVIAVLSQVIEDLIHGEMMQLAPNSDDD 244
Query: 156 VTEEDYLHVIKSKTAVLFSAALE---VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+ A + + + +G +LG+AFQL+DDVL
Sbjct: 245 DKRFQTYLTKTYRKTASLIANSCKAVAMLTVPTLSQWHIDNMYEFGEHLGMAFQLIDDVL 304
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
D+ + +GK G D + G T PV+ A QR + + DG + ++A
Sbjct: 305 DFVTDEANLGKPTGADLQMGLATGPVLFAAQRYPELNAILLRQFSLDG-----DTERALE 359
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+++++ + T A + Q A+ L DS +K+L+ V LQR
Sbjct: 360 LVKQSDGVGQTRMLAEFHFQAAQRCLFQFRDSLSRKALLHVAANFLQR 407
>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
Length = 295
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 68/324 (20%), Positives = 123/324 (37%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V+ + + +++E + ++Y + +GGKR+RP+L A LE + ACA
Sbjct: 12 RVDTALEQLFQAPRTELERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDIERADGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + +++L GD L S AF ++ + +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDALQSLAFGVLADRRRNP 131
Query: 129 ALEALSLVACTLAE-------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV-- 179
L L Q ++ + + I + V
Sbjct: 132 QNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIMHRHKTGALIEASVAL 191
Query: 180 -SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ R+AL Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 192 GALASGNTDELARKALLQYSRAIGLAFQVQDDILDVESDTATLGKTQGKDEAHDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A L
Sbjct: 251 ---------------------------------ALL----GLDAAKDYALELRDQALHVL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
R +S+ + L E+ + ++R +
Sbjct: 274 RPFGNSA--EPLRELARYIVERRS 295
>gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
Length = 298
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 67/323 (20%), Positives = 115/323 (35%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V + + + + + ++Y + +GGKR+RP+L A L AC
Sbjct: 15 ARVETALDQILPPVSVQPSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGLDAALLDHPAC 74
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
A+E IH +L+H +DD LRRG+ + T++L GD L + AF
Sbjct: 75 AVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQALAEAPGL 134
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + A + A + G+ L + I A++ +
Sbjct: 135 SAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHKTGALIRVSVQMG 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
G+ + L Y LG+AFQ+ DDVLD G+ ++GK G D K T P
Sbjct: 195 VLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQELNKATYP-- 252
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ L + + A +A +S+
Sbjct: 253 --------------------------------ALV----GLAEAKAMANQLINEAIESVS 276
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ L+ + + L R N
Sbjct: 277 IF--GERAQPLVWIANALLGRKN 297
>gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 297
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/333 (22%), Positives = 134/333 (40%), Gaps = 58/333 (17%)
Query: 8 TLKDMEKVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + + + + Y + GGKR+RP L AT ML+
Sbjct: 5 LSTDLSVIQQRINDFLSTKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVP 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S AF
Sbjct: 65 FEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + +S + + + L L+ +++ E + +H K+
Sbjct: 125 ELIAQDESLTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTSA 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ S + + +++Q L+ Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 185 LIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKIGKTVGSDE 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + +A
Sbjct: 245 NLHKSTYPKLL--------------------------------------GLEGAQQKAQD 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP +L E+ F ++R N
Sbjct: 267 LYQTALNALEELP--FDTTALKELAHFIVKREN 297
>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
Length = 334
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 67/333 (20%), Positives = 121/333 (36%), Gaps = 12/333 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M E V + K I + E+I D + Y + +GGKR+RP+L +A A
Sbjct: 1 MNEFEKYLKTKAAFVEKGLSKYILKIANSPEVIKDSMAYSLEAGGKRVRPVLVMAAAEAF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + ACA+E +HT +L+HDD+ LRRGK V+G ++L GD LL+
Sbjct: 61 GKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--KSKTAVLF 173
AF + + +++ + + VT+ +I K K
Sbjct: 121 YAFEVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKFKRITAV 180
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ S + + LK +++ + E G + +
Sbjct: 181 KKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAGASEADR 240
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ + + K S + + A + L + A +
Sbjct: 241 ANMRKYGNAMGLAFQIVDDILDVTVSEKKLGKSGSDKENAKLTFVSLYGLEVSRKYAKAV 300
Query: 291 GQKAKDSLRCLPDSSWKKS--LMEVVDFCLQRL 321
+A ++L + + KK+ L E+ DF L R
Sbjct: 301 LGEAVNALNKVKAINKKKAAPLYEMADFFLTRS 333
>gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429]
gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429]
Length = 332
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/327 (19%), Positives = 122/327 (37%), Gaps = 31/327 (9%)
Query: 13 EKVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
+K++ I + S V + + +K GKR+RP+L + + +
Sbjct: 12 KKIDEAIGKVIDENSLNSPVGNLVEELKKFCLRPGKRIRPLLFILGVEGFGGKVDETVYK 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR--------------LVWGNQTSVLVGDF 112
+A IE +H+ L+HDD++D S LRRG+ + + + VL
Sbjct: 72 IAATIEIMHSFLLIHDDIMDQSELRRGQPSMHNLLANKFKDRSFNPKIGEDLALVLGDIL 131
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ--LSLSKNLDVTEEDYLHVIKSKTA 170
+ LE S G++ S+++N +E+ L + K KTA
Sbjct: 132 FFIGLRVLSRLNIPYFFLEKFSECYINTGYGQILDVIYSMNRNYVRSEKISLEISKLKTA 191
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ N R+ ++ + GIAFQ+ DD++ + GK+ D
Sbjct: 192 YYTFFYPFYLGTVFTGGNVGRKLIEDIMIPAGIAFQIRDDIISTF--DEKSGKSNLSDIL 249
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T + + + ++E + M+++ A+ +
Sbjct: 250 EGKVTALIDF------GEYDEKFFEIYFKPEKTIEEINYIIECMKKSGAIESAKKVMEEL 303
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+KA +L + + K L +++D
Sbjct: 304 IKKAFKNLEKI-NFERKDVLKDLIDRL 329
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 73/336 (21%), Positives = 126/336 (37%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEM--IPDVVKYLIFSGGKRLRPMLTLATALML 57
M +D + + K + ++ + + ++Y + GGKRLRP+LT + + L
Sbjct: 1 MSSTDDWVNALQARAERALEKTLPPANNPPKRLHEAMRYAVLGGGKRLRPLLTYSAGIAL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A A+E IH +L+HDD+ LRRG +G T++L GD L +
Sbjct: 61 GVSEAVLDAPASAVELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLAGDALQA 120
Query: 116 QAFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF + E S + + + +A G+ L E
Sbjct: 121 LAFRTLAEPTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMETMHRL 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ ++ L + + + L + +G+AFQ+ DDVLD + +GK G
Sbjct: 181 KTGALIRASVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D KPT P +L L + R
Sbjct: 241 SDKAQDKPTYPSLL--------------------------------------GLTQAKAR 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A S + A+ +LR + + + L + DF ++R +
Sbjct: 263 AQSLLEDARQTLRAID--APTEHLEWLADFIVKRRH 296
>gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Coriobacterium glomerans PW2]
gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Coriobacterium glomerans PW2]
Length = 363
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 19/336 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
D + + + I C + + +GGKR RP++ + A
Sbjct: 31 SFADFLAAEHQDLERRIADFFCDRTDRADIDAYLYAPLARFSRNGGKRHRPLICMLAARA 90
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD---FL 113
+ + +A AIE +A L+HDD+ D RRG + G ++ GD
Sbjct: 91 VGGDAAAALDVATAIEHFQSAALIHDDIADRGNTRRGAPCLHVTEGEGIAINCGDLELIS 150
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSK 168
++ A + + L + Q + D+T EDYL + K
Sbjct: 151 MTAAVLDDANLGDELKIRLLRELVEMTRRTIEGQALDLGWARDARYDLTVEDYLDMATRK 210
Query: 169 TAVLFSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
TA A ++ G + L+S+G+ G+AFQ+ DD+++ ++ GK++
Sbjct: 211 TAWYSGAVPLACGAIAGGGCEVQVEGLRSFGLACGLAFQIQDDLIN-LQPLDGGGKDVRS 269
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK TL + A + + L++A I R+ ++ RA
Sbjct: 270 DITQGKRTLICVHA--LLDDAYHDELVDILESASTDPAVLERAVEIFRQTNSIAFASERA 327
Query: 288 YSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
AK +L + D+ ++ + + DF ++R++
Sbjct: 328 VELIAHAKRALAGIELDAECRRLFISMADFFIERVS 363
>gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 297
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 130/333 (39%), Gaps = 58/333 (17%)
Query: 8 TLKDMEKVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + + + + Y + GGKR+RP L AT ML+
Sbjct: 5 LSTDLSVIQQRINDFLSTKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVP 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S AF
Sbjct: 65 FEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAF 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL------HVIKSKTAVL 172
++ + +S + + + R + L ++LD+ ED +I
Sbjct: 125 ELIAQDESLTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGA 184
Query: 173 FSAALEVSSLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A + + +Q L+ Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 185 LIIASVLMGFNLSAHSQNLAVKQQLERYAQAIGLAFQVQDDILDVIGETHKIGKTVGSDE 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + +A
Sbjct: 245 NLHKSTYPKLL--------------------------------------GLEGAQKKAQD 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP +L E+ F ++R N
Sbjct: 267 LYQTALNALEELP--FDTTALKELAHFIVKREN 297
>gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
Length = 327
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 145/322 (45%), Gaps = 9/322 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
MK L+++ + + M + V+Y++ GGKR+RP L L + +
Sbjct: 1 MKQQNAKALQEL--FQTYLENLSYAREPMGLYKPVEYVLGIGGKRIRPTLMLLAYNLFKE 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E H TLLHDD++D + RRGK W ++L GD ++ ++
Sbjct: 59 DVHAVLSQAMALETYHNFTLLHDDLMDKADRRRGKPTVHKQWDENAAILSGDAMVMLSYQ 118
Query: 120 MVIETKSQEALEALSLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+++ + + V EG+ + + DVT +Y+ +I+ KT+VL +
Sbjct: 119 FMMKDCPAMYVRPVMEVFSQTALEICEGQQWDMEFERRQDVTAGEYMEMIRLKTSVLLAG 178
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
AL++ +++ G + Q L G+ +G+AFQL DD LD G+ GKNIG D K T
Sbjct: 179 ALKIGAILGGASEADAQKLYDLGIRIGLAFQLQDDYLDVYGDPKVFGKNIGGDILCNKKT 238
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+I AF+R + K + + + ++ I + + + Y ++
Sbjct: 239 FMLITAFERAGEETKAELQGWMTAEQYDPARKIEAVTAIYNKEKIGDICLAKIEDYYKEG 298
Query: 295 KDSLRCLP-DSSWKKSLMEVVD 315
L + S +K+ L + +
Sbjct: 299 MGLLEEVGVASEYKRHLSDFIQ 320
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii]
Length = 295
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++L D + V + + + +V + + + +KY + +GGKRLRP+L L T +L
Sbjct: 2 NFKELMEFDKQIVEKYMDELLSINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNK 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +ACAIE IHT +L+HDD+ LRRGK +V+G T++L GD LL+ A
Sbjct: 62 NPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
++I S++ + +++ ++ + + + +KT
Sbjct: 122 HEIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ +++++ ++ ALK+Y +G+AFQ+ DD+LD G E+GK IG D
Sbjct: 182 GALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKKIGSDE 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T P L ++ A +
Sbjct: 242 LNDKATYPKYF--------------------------------------GLEKSKEYAKN 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +SL K +E+ D+ + R
Sbjct: 264 TITNAIESLNVFEPRE-KTFFVELADYIICRK 294
>gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
14672]
gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
14672]
Length = 338
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D + + V + +R + + +V +L+ +GGKRLRP+L L A + G
Sbjct: 19 ALRDRLAERLRTVERRLQERAARAADPRVAPLVGHLVTTGGKRLRPLLVLLGAEFGDPEG 78
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A E +H ++L HDDV+DD+ +R G +A WGN+ +V GD+LL+QA +
Sbjct: 79 EGVVDAAVLAELVHVSSLYHDDVIDDAGIRHGADSANARWGNRRAVFAGDWLLAQAAQLS 138
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G+ +L + YL V K+A L +L++ +
Sbjct: 139 CALGPRAVRLNAVTADR-LVRGQALELLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGA 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG + L YG LG+AFQ+ DD+LD + GK G D G +LPV+LA
Sbjct: 198 LQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITSPASASGKEPGMDLEAGVLSLPVLLA 257
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++A ++R++ AL + +A+ +L L
Sbjct: 258 LAGDGAGDGELRALIAAGPAAGTRPHRRALELLRDSAALAAAGALRDEHLARARTALAAL 317
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P + ++ L + DF R +
Sbjct: 318 PRTPARRILGALCDFVAHRGS 338
>gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis
ATCC 14672]
Length = 341
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 2/321 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L D + + V + +R + + +V +L+ +GGKRLRP+L L A + G
Sbjct: 22 ALRDRLAERLRTVERRLQERAARAADPRVAPLVGHLVTTGGKRLRPLLVLLGAEFGDPEG 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A E +H ++L HDDV+DD+ +R G +A WGN+ +V GD+LL+QA +
Sbjct: 82 EGVVDAAVLAELVHVSSLYHDDVIDDAGIRHGADSANARWGNRRAVFAGDWLLAQAAQLS 141
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L G+ +L + YL V K+A L +L++ +
Sbjct: 142 CALGPRAVRLNAVTADR-LVRGQALELLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGA 200
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG + L YG LG+AFQ+ DD+LD + GK G D G +LPV+LA
Sbjct: 201 LQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITSPASASGKEPGMDLEAGVLSLPVLLA 260
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ ++A ++R++ AL + +A+ +L L
Sbjct: 261 LAGDGAGDGELRALIAAGPAAGTRPHRRALELLRDSAALAAAGALRDEHLARARTALAAL 320
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P + ++ L + DF R +
Sbjct: 321 PRTPARRILGALCDFVAHRGS 341
>gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1]
gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1]
Length = 293
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + + +V+ + +R + + + + GGKR+RP L + M
Sbjct: 1 MLVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 PLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F +V E E + LA+ + + + + KT
Sbjct: 121 FEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTATQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++++ + +VN ++ + + + + +KY +FSGGKRLRP+LTL A ML+
Sbjct: 5 NIKEILTQYTSEVNSVLKEIMNIEKNALAPGLVKAMKYSLFSGGKRLRPILTLMVAEMLD 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116
D+ + + +IE +HT +L+HDD+ RRGK + V+G T++L GD LL+
Sbjct: 65 GDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAILAGDALLTF 124
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTA 170
AF ++ + + + G +++ +++ E+ + KT
Sbjct: 125 AFNILSKLNLPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEELKKIHSGKTG 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF +++ + A + AL+ Y LG+ FQ+VDD+LD G +GK +G D
Sbjct: 185 ALFKSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLGKRVGRDDE 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L A
Sbjct: 245 LNKATYPRLL--------------------------------------GLKQAVKEAEFN 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA+DSL + ++ L ++VD+ L R +
Sbjct: 267 AEKARDSLGPFGERAF--LLKQLVDYILVRQS 296
>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
Length = 299
Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 136/333 (40%), Gaps = 58/333 (17%)
Query: 8 TLKDM----EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ ++VN I + + + + D + Y + GGKR+RP L AT ML
Sbjct: 7 LKTDLVTFQQRVNQFIEQELKQYSAYHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVS 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 67 LEALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAF 126
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + L+ + + L +S +K + ++E + +H K+
Sbjct: 127 ELIAKDPFLTDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLSELELIHRNKTGA 186
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ S + + ++ AL+ Y +G+AFQ+ DD+LD G+ +++GK G D
Sbjct: 187 LIVASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKIGKTAGSDE 246
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +A S
Sbjct: 247 SLNKSTYPKLL--------------------------------------GLEGAMEKAQS 268
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q + ++L LP ++L + F +QR +
Sbjct: 269 LYQTSLEALDELP--FDTRALKALAHFIIQRES 299
>gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20]
gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 297
Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 130/333 (39%), Gaps = 58/333 (17%)
Query: 8 TLKDMEKVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
D+ + I + + + + + Y + GGKR+RP L AT ML+
Sbjct: 5 LSTDLSVIQQRINDFLSTKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVP 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L S AF
Sbjct: 65 FEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAF 124
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL------HVIKSKTAVL 172
++ + +S + + + R + L ++LD+ ED +I
Sbjct: 125 ELIAQDESLTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTGA 184
Query: 173 FSAALEVSSLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A + + +Q L+ Y +G+AFQ+ DD+LD GE +++GK +G D
Sbjct: 185 LIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKIGKTVGSDE 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L + +A
Sbjct: 245 NLHKSTYPKLL--------------------------------------GLEGAQQKAQD 266
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP +L E+ F ++R N
Sbjct: 267 LYQTALNALEELP--FDTTALKELAHFIVKREN 297
>gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/334 (23%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+K L D+ +N + + +D E I Y + +GGKRLRP L AT ML
Sbjct: 3 IKELITHAQTDVANTLNLYFDQSLNTD-ETIKAATHYSLMNGGKRLRPFLVYATGKMLGA 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +LA AIE IH+ +L+HDD+ LRRG+ +V+G ++L GD L + A
Sbjct: 62 DKQDLDVLAAAIECIHSYSLVHDDLPAMDDDELRRGRPTCHIVYGEAHAILAGDALQALA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTA 170
F ++ + + +A + LA Q ++ V L I
Sbjct: 122 FELIAKHNFNCSAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELERIHKLKT 181
Query: 171 V--LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ A + V + + L ++G +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 182 GALISCAITLGALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L + +A
Sbjct: 242 IAANKATYPALLGMLG--------------------------------------AKEKAQ 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L + + +L + ++ ++R +
Sbjct: 264 NLIQQAHAALANID--ADTSALASLANYLIERDH 295
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 54/331 (16%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++ V+ + + I ++ I V+Y +F+GGKRLRP+LTLA A +
Sbjct: 1 MSWDINQAIKDVDEALERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVP 60
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACAIE +HT +L+H +DD RRG+++ V+G+ ++L GD LL+ AF
Sbjct: 61 RLHALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL---------DVTEEDYLHVIKSKT 169
+ + A + + V ++ + KT
Sbjct: 121 ETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LF+ ++ +++ G Q L + N+G+AFQ+VDD+LD G+ +GK G D
Sbjct: 181 GALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQ 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + L E +A
Sbjct: 241 NRQKATYPALY--------------------------------------GLKQAEEKARD 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A+ + D KSL+ + ++R
Sbjct: 263 LLSAAEKEMEYFGD--AGKSLLFLAKKLVER 291
>gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 345
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 133/334 (39%), Gaps = 19/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF---------SG--GKRLRPMLTLATA 54
L + V+ + I S + + Y +G GK +RP L LA
Sbjct: 14 ALLERTRSAVDPELRSAIASLPGSMRRIAMYHFGWERSDGTPVAGATGKAVRPALVLAAC 73
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L V A A+E H TLLHDDV+D+ RR + A V+G +++ GD +
Sbjct: 74 QALGGDPRQAVRAAAAVELAHNFTLLHDDVIDEDPTRRHRPTAWSVFGTADAIIAGDAMS 133
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A + A ++ + L+VT E+ L + +KT
Sbjct: 134 ALALRLLAEDRHPASGPAAVRLAACVIELCAGQQADCAFEERPPLEVTLEECLAMATAKT 193
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG A+ ++G G+AFQL+DD++ G+ + GK G D
Sbjct: 194 GALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLIDDLIGIWGDPEQTGKPAGADL 253
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + G +S +++A + + A
Sbjct: 254 AAHKKSLPVVAALASGTAAAVELAELY--RGPMSASAVRRAADAVERAGGRDWAQMHAGD 311
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD + L+ + +F +R +
Sbjct: 312 RMSRAVGRLSRAVPDLTAASDLLSLAEFVTRRNH 345
>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
Length = 296
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P + +L + +F + R +
Sbjct: 267 YQSALSELEKIPFDTA--ALRALAEFIITRKS 296
>gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37]
gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37]
Length = 296
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 122/334 (36%), Gaps = 54/334 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALML 57
M L + + ++V+ + K I ++ + + Y GGKR+RP L A ML
Sbjct: 1 MTQLAETLNQYQQRVDKNLNKYINITHPISPLLNEAMGYGALLGGKRVRPFLVYAVGDML 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ LA A+E IH +L+H +DD LRRG++ + T++L GD L +
Sbjct: 61 GCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQMTCHKKFDEATAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSK 168
AF ++ +A + LA+ + + I
Sbjct: 121 LAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQALDLVAENQSVNLVTLQKIHQA 180
Query: 169 TAVLFS--AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A + + + Q L ++ +G+AFQ+ DD+LD G+ +GK G
Sbjct: 181 KTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQVQDDILDIIGDTQTLGKPQG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K T P +L L + + +
Sbjct: 241 SDLALHKSTYPALL--------------------------------------GLEEAQNK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + +A+ +L LP + + L + + + R
Sbjct: 263 AQALCHEAQLALSQLPYN--TELLSKFAQYIIAR 294
>gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090]
gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18]
gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18]
gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1]
gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2]
gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090]
gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
Length = 298
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 128/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S E+ + + ++Y GGKRLRPML LA + + D
Sbjct: 16 AQTELLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAMADAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
Length = 298
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 71/335 (21%), Positives = 133/335 (39%), Gaps = 61/335 (18%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + + K + S + + + ++Y GGKR+RP+L A ++
Sbjct: 10 MTSIQQY-------MEQALEKLLPSADCAPQRLHEAMRYATLEGGKRVRPLLVFAAGELV 62
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ DN + A+E +H +L+HDD +D+ LRRGK + + + T++LVGD L +
Sbjct: 63 GAQADNLARIGAALEMVHAYSLVHDDMPCMDNDVLRRGKPTCHIAYDDATALLVGDALQT 122
Query: 116 QAFCMVIETKS---------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+AF ++ + A + +A G+ L+ E +
Sbjct: 123 RAFELISQPMPDIAPASQLEMVRALAHAAGHAGMAGGQAIDLASVGLPLTLPELEFMHML 182
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ +A L S + + ++AL ++ +G+AFQ+VDD+LD + +GK G
Sbjct: 183 KTGALIRAAVLAGSMAGRELSAAEKEALDAFAKRIGLAFQVVDDILDCEADTATLGKTAG 242
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D N KPT +L L + +
Sbjct: 243 KDAANDKPTYVSLL--------------------------------------GLAEAKRM 264
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +A +L L ++ D+ + R
Sbjct: 265 AKDLHDQAFAALEGF--GPQADRLKQLADYIVARS 297
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/336 (23%), Positives = 144/336 (42%), Gaps = 56/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
MK E + + + + I E I + ++Y F+GGKR+RP+LT+ A +
Sbjct: 1 MKNFEIELKEAGKIIEKALDFYIPKSNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAAELF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+G+ + AC IE IHT +L+HDD ++D+ RRGK V+G+ ++L GD LL+
Sbjct: 61 GLQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGE----------LRQLSLSKNLDVTEEDYLHVI 165
AF +++ E + +++ LS+ + + E+ ++
Sbjct: 121 LAFNTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMD 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT L A+L + +A S L +G +G+ FQ+VDD+LD G+ ++GK +
Sbjct: 181 YHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D RN K T P + ++
Sbjct: 241 GSDVRNKKSTFPSVY--------------------------------------GYENSVK 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++AK+ + + + +++VDF ++R
Sbjct: 263 LIKDLSEEAKEIILEFKNGEF---FVQLVDFLVERQ 295
>gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3);
farnesyltranstransferase [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + + + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLV 194
Query: 130 LEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + V E + KTA L AA
Sbjct: 195 APERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P
Sbjct: 255 VLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L ++ A ++A++
Sbjct: 315 RLI--------------------------------------GLERSKEVAEKLRREAEEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L S L+ + + R N
Sbjct: 337 LLGFDPSKA-APLVALASYIACRHN 360
>gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
Length = 291
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/329 (23%), Positives = 135/329 (41%), Gaps = 50/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + V + RI + + + ++Y + +GGKR+RP+L +A A + +G
Sbjct: 2 DFKAYYANQQKLVENYLKNRIAKKGISKVDEAMEYSLMAGGKRIRPILLMAAAEAVGSKG 61
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
N++ +AC +E IHT +L+H +DD RRG++ V+G +VL GD LL+ AF
Sbjct: 62 YNYLPVACGLEMIHTYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDGLLTLAFE 121
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVL 172
+++E K+ + + V + + +T E+ + KT L
Sbjct: 122 VMLEQKNVDPKVLIETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKLHAGKTGAL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F AA+ + +AG + AL + LG+AFQ+ DD+LD G E+GK +G D +N
Sbjct: 182 FIAAIRGGAHLAGANDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGKPVGSDAKNH 241
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T + L A
Sbjct: 242 KSTYVTLY--------------------------------------GLQAAHELAEKTVA 263
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A + L +++ + L E+ R
Sbjct: 264 EALECLEMFGENA--EPLREITRLMTDRK 290
>gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Neisseria meningitidis 8013]
gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902]
Length = 298
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + + T++LVGD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIQYDEATALLVGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
Length = 343
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
+GGK +R L + +A + V A A+E +H +L+HDD++D RR +
Sbjct: 62 NGGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDLMDGDTERRHRPTVWA 121
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLDV 156
+WG+ +++L GD +L+ A +V+++ S A+ A L G+ ++ + DV
Sbjct: 122 LWGSASAILTGDAMLALAQEVVLDSGSPHAVAAGRLLTETTRRLIHGQFLDVAFEQRDDV 181
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ + + KT L SA+ + +++AG V AL +G +G+AFQLVDDVL G
Sbjct: 182 GLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQLVDDVLGIWG 241
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ GK++ D + K +LP+ A G + + D +L + ++ +
Sbjct: 242 DPAVTGKSVYSDLQARKKSLPITYATTHGGAAGRRLAEWLAGD---DDTDLARIAALVDD 298
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + A+ +L LP + L+ + F R
Sbjct: 299 AGGRAWATAEAARHVATAEQALAALPPGP-RADLVSIARFIAGR 341
>gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
Length = 296
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKV----NFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V N + + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQIRINRFLEAQFDGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFVITRKS 296
>gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491]
gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491]
gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Neisseria meningitidis WUE 2594]
Length = 298
Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 74/322 (22%), Positives = 125/322 (38%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 354
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + V
Sbjct: 30 LRAAVDRLAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGAAPEVGVPG 89
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 90 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 149
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + +L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 150 EAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 209
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L+ YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 210 GADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAA 269
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 270 GGAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEAL 329
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD + + DF + R
Sbjct: 330 DAVDMPD-RVRDRFTALADFVVVRK 353
>gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24]
Length = 342
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + V
Sbjct: 18 LRAAVDRLAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGAAPEVGVPG 77
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 78 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 137
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + +L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 138 EAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 197
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L+ YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 198 GADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAA 257
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 258 GGAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEAL 317
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD + + DF + R
Sbjct: 318 DAVDMPD-RVRDRFTALADFVVVRK 341
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/323 (21%), Positives = 123/323 (38%), Gaps = 54/323 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + R+ + E + ++Y + GGKR+RP+L+ A ++ + ++A
Sbjct: 14 ARIETFLETRLPAADCVPERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAA 73
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRGK + + T++L GD L + AF ++ E
Sbjct: 74 AVELIHAYSLVHDDLPCMDDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLA 133
Query: 128 EALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E + +A G+ L + E I A++ +A +
Sbjct: 134 DIPETQLQMIAQLALASGSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVML 193
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + L + +G+AFQ+VDD+LD +GK G+D + KPT
Sbjct: 194 GARCSSCLNDEQLAQLDHFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNKPTYVS 253
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL + A A +L
Sbjct: 254 IL--------------------------------------GVSQARELAEKLQHDAYQAL 275
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ L +V DF ++R
Sbjct: 276 DGF--NEAALRLRQVTDFIIKRK 296
>gi|73973963|ref|XP_539071.2| PREDICTED: similar to candidate tumor suppressor protein [Canis
familiaris]
Length = 400
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/347 (15%), Positives = 119/347 (34%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVV------KYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIALQVRKLVGTQHPLLTTASGLVHDSRHNLQ-----LRGLVVLLISKA 122
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSMNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + D
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENHITED 242
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 243 IGISTWKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQPFI 302
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + V+ G G++ + K ++
Sbjct: 303 KEKTSDSVTFNLNSA-----PVVLHQEFLGRDLWMKQIGEAQEKGRL---DYAKLRETIK 354
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 400
>gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 298
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y + GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGEAVHEAVGQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRPTEL 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ A + + +A G+ L+ + A++ +A +
Sbjct: 136 PAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L ++ +F + R
Sbjct: 278 PFGNKALR--LRQLAEFTIVRK 297
>gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)]
gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)]
Length = 378
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + V
Sbjct: 54 LRAAVDRLAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGAAPEVGVPG 113
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 114 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 173
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + +L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 174 EAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 233
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L+ YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 234 GADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAA 293
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 294 GGAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEAL 353
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD + + DF + R
Sbjct: 354 DAVDMPD-RVRDRFTALADFVVVRK 377
>gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Streptomyces Coelicolor A3(2)
Length = 352
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + V
Sbjct: 20 LRAAVDRLAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGAAPEVGVPG 79
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 80 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 139
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + +L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 140 EAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 199
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L+ YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 200 GADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAA 259
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 260 GGAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEAL 319
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD + + DF + R
Sbjct: 320 DAVDMPD-RVRDRFTALADFVVVRK 343
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
Length = 294
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 70/333 (21%), Positives = 126/333 (37%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ V ++ K + + I + Y +F GGKR+RP+L + + +
Sbjct: 2 DIKKELKDKQSFVEDVLKKYTIKEGKPKSIFESFNYSLFVGGKRIRPILLMESCKCVGGD 61
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + L A+E IHT +L+HDD +DD LRRGK V+G T++L GD LL+ A+
Sbjct: 62 TNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDSLLNLAY 121
Query: 119 CMVIETKSQEALEALSLVACTL---------AEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+++ + A + S+ + E + +KT
Sbjct: 122 ETMLKGAKSSKDINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHDNKT 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ A++ +++ G + + L Y +G+ FQ+VDD+LD + +GK +G D
Sbjct: 182 GAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGKKVGMDS 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + L + +
Sbjct: 242 ERNKMTYPYVY--------------------------------------GLERSYEKVDE 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +SL S L E+ + +R N
Sbjct: 264 LLNISLNSLSDF--GSEADFLRELALYLAKRKN 294
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/332 (19%), Positives = 115/332 (34%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L K E N L+ +R+ + + ++Y + GGKR+RP+L A A
Sbjct: 4 ELTHFLAKYREHTNGLLEERLIGLKHYNTDLIEAMRYSLLLGGKRVRPVLVYAAAYATGG 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVG 110
ACAIE IHT +L+HDD+ + +
Sbjct: 64 ISAAADDCACAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILAGDALQCQA 123
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
L+ + M Q + + + V + + + KT
Sbjct: 124 FEWLANSQHMPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHLETMHQHKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L SA++E+ ++ AG + L+ Y +G+AFQ+ DD+LD +GK G D
Sbjct: 184 ALISASVEMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTANTATLGKEAGADAE 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
KPT +L L +++A
Sbjct: 244 RNKPTYVSLL--------------------------------------GLDGAKHKASEL 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A S++ + + L ++ + +QR +
Sbjct: 266 LQQALASIKDFDERA--DILRQLATYIVQRDH 295
>gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum]
Length = 432
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 22/302 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--------------HVLLACAIEFIH 75
+ + KY GGK RP ++L A +A E IH
Sbjct: 128 LQKMAKYYFDQGGKLFRPTVSLLMAHACNQIKPKTPVVESGRETVTANQYKIAVISEMIH 187
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
TA+L+HDDV+D+S +RRG +WGN+ +VLVGDF+L++A ++ + ++
Sbjct: 188 TASLVHDDVIDESDVRRGSPTVNAIWGNKMAVLVGDFILARATQVLCSIARPNVISVMAT 247
Query: 136 VACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ L GE Q++ D + + Y+ SKTA LF+ + + ++++A + + +
Sbjct: 248 IIEDLVRGEFMQMTTGSETDATLRFDKYMAKTYSKTASLFANSCKSAAMLADIPEANEEI 307
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
YG +LG+AFQLVDD+LD+ MGK D + G T PV+ A +E
Sbjct: 308 AFEYGRSLGLAFQLVDDLLDFVSTSAAMGKPTANDLKLGLATAPVLFA-----AQEHPEL 362
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLME 312
I+ ++ A+ ++ + + T A + +A P+ + L+E
Sbjct: 363 NRLISRRFSKDGDVNVAWEMVANSSGVEMTRNMARGHAYRAAKMASKFPNGDSVRDHLVE 422
Query: 313 VV 314
+
Sbjct: 423 LA 424
>gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1]
Length = 295
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 121/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++E + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + ++L GD L S AF +++
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLS 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++++ L + G+ L + A++ ++
Sbjct: 131 PQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A + + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKVYAIELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ + L + + ++R N
Sbjct: 273 LQGF--GETAEPLRALARYIVERRN 295
>gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
Length = 296
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESYNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus]
Length = 360
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/347 (18%), Positives = 120/347 (34%), Gaps = 27/347 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATAL-ML 57
++ + + + I DV+ + + GGKR+R L
Sbjct: 12 LEEVRQPVNAVLREFIEQQQNSIPPDVDIGPAVRALGDFVLHGGKRIRAALCYWGWRGAG 71
Query: 58 EYRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL------- 108
D + A A+E H L+HDD++D +A RRG+ + +
Sbjct: 72 GGDEDLTSAYRAAAALEVCHCFGLIHDDIIDGTATRRGRPSLHCQLASLHEQAGWHGDAA 131
Query: 109 ---------VGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNL 154
+GD L A ++ S+E L E + + L + +
Sbjct: 132 AFGRSSALLMGDLCLFWADELLTTACSEERLVEVRLEYSGMRVAEVCGQMLEMIVQASRD 191
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
L++ +AG +R++ ++G+ LG AFQL DD+L
Sbjct: 192 FDVSSGMTVAHYKTAKYATERPLQIGGRLAGSSAELRKSYAAFGLPLGEAFQLRDDILGV 251
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ GK I +D R GKPT+ + A+ T +++ + I+
Sbjct: 252 FGDPAVTGKPITDDLREGKPTVLIAHAYTNATPAQRSRMDELYGKADLDEAQAAVLREII 311
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQR 320
+ A E +++ +L P ++ L ++ R
Sbjct: 312 QVTGARDAVEKAIEVRIEQSLSALDDAPIVEEARRVLADLSIAITDR 358
>gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
Length = 296
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKV----NFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V N + + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQIRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + + + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + V E + KTA L AA
Sbjct: 195 APERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P
Sbjct: 255 VLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L ++ A ++A++
Sbjct: 315 RLI--------------------------------------GLERSKEVAEKLRREAEEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L S L+ + + R N
Sbjct: 337 LLGFDPSKA-APLVALASYIACRHN 360
>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 298
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 56/338 (16%)
Query: 1 MK-MLEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALM 56
MK + + +KV+ + + + S+ + I + ++Y +F+GGKRLRP L ++ +
Sbjct: 1 MKLDINNYIKFWAKKVDSWLEQYVISNSQYIDGLVEAMRYSLFAGGKRLRPALIYSSFGI 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ D A A+E +HT +L+H +DD LRRGK +V+G ++L GD LL
Sbjct: 61 FDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALL 120
Query: 115 SQAFCMVIETKSQEALEALSL----------VACTLAEGELRQLSLSKNLDVTEEDYLHV 164
++AF ++ + ++ + + G ++ + +
Sbjct: 121 TKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDGTVSFI 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+KTA L S E+ +++ + ++ + +G +G+AFQ++DD+LD E+GKN
Sbjct: 181 HLNKTAALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTEELGKN 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
D + K T P I + +
Sbjct: 241 AKSDLKKEKATYPAIF--------------------------------------GIEKSR 262
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A A L L E+ F ++R N
Sbjct: 263 KIADDLIFSAFGILDKY--GEAAVPLRELASFVVERKN 298
>gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + + + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + V E + KTA L AA
Sbjct: 195 APERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P
Sbjct: 255 VLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L ++ A ++A++
Sbjct: 315 RLI--------------------------------------GLERSKEVAEKLRREAEEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L S L+ + + R N
Sbjct: 337 LLGFDPSKA-APLVALASYIACRHN 360
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 52/321 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ V +L+ + + E + ++Y + +GGKRLRP+L +A A + G + C
Sbjct: 14 DLVEEGLLRELKKVPAYDETLEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGC 73
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ RRGK V+G+ +VL GD LL+ AF +++ +
Sbjct: 74 AIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFEVMLRQEGA 133
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+++V+ + + + + KT LF AA+
Sbjct: 134 APETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGKTGALFCAAIRSG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + AL Y G+AFQ+ DD+LD G+ +GK +G D RN K T +
Sbjct: 194 AILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLT 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+L + + A +A +L
Sbjct: 254 --------------------------------------SLEEAKKLAEDAVDEAVVALDI 275
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ + L ++ F L R
Sbjct: 276 FGERAA--FLRDLALFLLGRK 294
>gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
Length = 292
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 50/319 (15%)
Query: 14 KVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + + + + + ++Y + +GGKR+RP+L L A +L + A +
Sbjct: 12 EVESFLEQCLDARRMPATLYESMRYSLLAGGKRVRPVLCLVWAELLGGDRQAVLPFASGL 71
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---- 125
E IHT +L+H +DD LRRGK + +G ++L GD LL+ AF +++
Sbjct: 72 ECIHTYSLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHADLPAE 131
Query: 126 ---SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L A + A + G++ + L+ + ED + KT L A ++
Sbjct: 132 RLVRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMHGMKTGALLQVACTSGAV 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG Q +YG LG+AFQ+ DD+LD G+ +GK +G D K T P ++
Sbjct: 192 LAGAIEEDIQRAATYGGALGLAFQVADDILDVVGDEAALGKPVGSDQGADKVTYPALM-- 249
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L ++ +A+++L+
Sbjct: 250 ------------------------------------GLDKSKSLGQEMVAQAQEALQG-K 272
Query: 303 DSSWKKSLMEVVDFCLQRL 321
L ++ + + R
Sbjct: 273 SGPQADFLSDLAQYVMDRT 291
>gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 335
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 12/320 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
+ V + + + + + +V Y GGK LRP L L A +
Sbjct: 14 QLVQPALREAVTTLTPAMRRIVSYHFGWTDEHGEVVNGGGGKALRPALALLAARAVGAPP 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
++ + A A+E +H +LLHDDV+D RR + A ++G ++L GD LL+ A ++
Sbjct: 74 ESALPGAVAVELVHNFSLLHDDVMDGDTERRHRPTAWRLFGTPAAILAGDALLTLAMEVL 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ A + L+ L EG+ + V+ E+ L + KTA L + + E+ +
Sbjct: 134 DSVGERSANQRLAAAVHRLIEGQSADIEYESRTIVSVEECLDMEDGKTASLMACSAELGA 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L+ G + AL +G NLG+ FQLVDD+L G GK + D R K ++PV++A
Sbjct: 194 LLGGADDRTVAALGDFGRNLGMGFQLVDDLLGILGSPEVTGKPVLADLRVRKKSVPVVVA 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
T + + + ++++ ++ + A+ T RA+ Y A+ SL +
Sbjct: 254 LNADTDSAAALQEFYRRERPPNEDDVRTMAALIEDTGAITWTRERAHRYIAAAETSLATV 313
Query: 302 -PDSSWKKSLMEVVDFCLQR 320
P + +L ++ F ++R
Sbjct: 314 NPPEEVRAALADLTRFVVER 333
>gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 337
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L L+++++ + + ++ +L+ GK RP+L +A + +
Sbjct: 11 IANFKSLILQNLQE------TLLNDGDTEVQSIINHLLSRQGKLFRPVLVYLSANIHQVD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A A E IH A+L+HDD++D+S RRGK WGN+++VLVGD+L S+AF +
Sbjct: 65 KDRVLKTAMASELIHLASLVHDDIIDNSDYRRGKQTVNYYWGNKSAVLVGDYLFSKAFSI 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ S + + + + +GEL QL+ + ++ E Y VI+ KTA L +A E
Sbjct: 125 LAMIDSPKIMALFTDAISKMCQGELIQLNNAFKSGISREIYFKVIEYKTAALLAACCESG 184
Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++++ ++ K+YG++LG A+Q++DDV+DY + K G+D G TLP
Sbjct: 185 AILSSGNGKSCKSAAALKNYGLHLGRAYQIIDDVMDYTVPMGSSEKPRGKDLTEGIITLP 244
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VIL ++ + + + + NR + + A A
Sbjct: 245 VILLMEKNELTGQELEEFWQAGP--TPNQFSLLVRDLNNNRCITEALRIAEHELNLANQY 302
Query: 298 LRCLPDSSWKKS--LMEVVDFCLQRLN 322
L + + + L + LQR+N
Sbjct: 303 LTQI-SGEYSELDVLFSMKSQLLQRVN 328
>gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 360
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/342 (19%), Positives = 125/342 (36%), Gaps = 34/342 (9%)
Query: 13 EKVNFLILKRICS--------DVEMI--PDVVKYLIFSGGKRLRPMLTLATAL-MLEYRG 61
++++ + + + D ++ + ++ + GGKRLRP
Sbjct: 17 QRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVDS 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------------- 105
D V A+EF+ + L+HDD++D S RRG+ A + +
Sbjct: 77 DQVVATLAALEFVQASALIHDDLMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAA 136
Query: 106 SVLVGDFLLSQAFC--MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
++L+GD L + A + E + Q +
Sbjct: 137 AILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTVGQYLDVLTQATGDTSLDR 196
Query: 164 VIKSKTAVLFSAAL----EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
K + + + +AG V A +YG+ LG AFQL DDVL G+
Sbjct: 197 AAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDPE 256
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK G+D R GK T V A + + + + + + + ++ + A
Sbjct: 257 RTGKPAGDDLREGKRTYLVAAALEALDPAGREALLAGLGVPDLDAAGVDRLRELITTSGA 316
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
L E + + A +L + D+ +++L+++ +R
Sbjct: 317 LDRAERHITALTESALAALTAVDLDTEARQALVDLAIAATRR 358
>gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
baltica SH 1]
gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
baltica SH 1]
Length = 317
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 59/340 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L+D V + E + ++Y + + GKRLRPMLT+ A
Sbjct: 18 ESLKDYMDARRPAVEAALQAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIMAAEACG 77
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ + A A+E IH +L+H +DD LRRG+ + + T++L GD L S
Sbjct: 78 GDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSM 137
Query: 117 AFCMVIETKSQEALEALSL--------------VACTLAEGELRQLSLSKNLDVTEEDYL 162
AF + + S A + + E + D +
Sbjct: 138 AFAHLHHSTSDATKSAALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADAALKHLE 197
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT LF+A + ++ AG + AL Y G+AFQ+ DD+LD +G
Sbjct: 198 AIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTSTDERLG 257
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T P ++ L
Sbjct: 258 KRTGKDDGRGKLTYPGLM--------------------------------------GLDR 279
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A S A +SL+ + + L ++ DF L+R N
Sbjct: 280 ARAHAESTIHMAHESLQLF--GTAGQRLRKLADFVLERTN 317
>gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
Length = 378
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 12/292 (4%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L + +A + + + A A+E +H +LLHDD++D RR + V
Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 146
Query: 101 WGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + ++ A L+ L +G+ + +S V+
Sbjct: 147 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTTATRALIDGQAQDISYEHRDRVS 206
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+
Sbjct: 207 VEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLLGIWGD 266
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND------GKISVENLKKAF 271
+ GK D R K +LPV+ A G + + D S E
Sbjct: 267 PDSTGKQTWSDLRQRKKSLPVVAALAAGGAASERLGEILAADAKSSDFENFSEEEFAARA 326
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRL 321
++ E T A A ++L +PD + + DF + R
Sbjct: 327 ALIEEAGGREWTAAEARRQHTIAIEALNAVDMPD-RVRDRFTALADFVVVRK 377
>gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
Length = 283
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 49/318 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + + ++K++ + K + S+ E I + +KY + GGKR+RP++ +A +
Sbjct: 8 INPLLETYGEYIKKIDQALDKELDLYSESEFI-EPLKYSLE-GGKRIRPIILTLSAESIG 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
DN +CA+EF+H +++HDD++D+ +RR K + +G TSVL GDF+L
Sbjct: 66 KVDDNTFAASCAVEFLHMESIIHDDIIDNETMRRQKDPFHIKYGYNTSVLTGDFVLGLIL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ A ++EGE+ + L + DVT +DYL VI+ KTA F A
Sbjct: 126 AVCSRLDNPRITKDLATTAMLMSEGEMIENRLETSEDVTFDDYLKVIEYKTATAFEVAAR 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++IA + L YG N+GIA+Q+ DD+LD++ E
Sbjct: 186 TGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLDWKNEDKLFN---------------- 229
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ ++ E Y +KA+ SL
Sbjct: 230 -----------------ILIKKSSDPRDV------------FNKMEELLKEYSEKARTSL 260
Query: 299 RCLPDSSWKKSLMEVVDF 316
R +PDS K +L ++ F
Sbjct: 261 RKIPDSDAKINLDNLIKF 278
>gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia
pseudomallei 7894]
Length = 363
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 14/328 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62
L + + + + + + ++Y + GK++RP+L L A + G
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTG-LEYETYQRGKKIRPLLLLLAASLFRADGARRA 83
Query: 63 ----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ A ++E +H ATL+HDD++D + LRRG + G ++LVGD QA
Sbjct: 84 PLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGDLQFIQAI 143
Query: 119 CMVIETKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ +A A + E + R + +++ Y V KTAVL
Sbjct: 144 RVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVADRKTAVL 203
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F A E+ + ++G +AL YG +LGIAFQ++DDV D+ GK D
Sbjct: 204 FGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDFLHPQASAGKAPQADIAAR 263
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TLP+I A + + L +A + ++ LVD A +
Sbjct: 264 CLTLPIINAMEELGDAHELTRIMRGAVAAPEPAALDRAARAVERSQGLVDAYRAARRHAL 323
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A D L+ L D +++L + + + R
Sbjct: 324 QAADCLQGLADHPERRALESIASYVVDR 351
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/328 (21%), Positives = 125/328 (38%), Gaps = 55/328 (16%)
Query: 9 LKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + + + + + + + ++Y + GGKRLRP+L A A + +
Sbjct: 38 QERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRA 97
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
CA+E IH +L+HDD +D+ +RRGK + +G +++L GD L + AF +++
Sbjct: 98 GCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPED 157
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA---------A 176
+ + L Q H+ +++ +
Sbjct: 158 DGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREMHRLKTGALLLGSV 217
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L ++ A AL YG LG+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 218 LMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTF 277
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L L A Q+A
Sbjct: 278 VSLL--------------------------------------GLEAARAHAEQLRQQAHA 299
Query: 297 SL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+L L D+ ++L + D +QR +
Sbjct: 300 ALTRSGLADT---QALGALADMVVQRTH 324
>gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810]
Length = 296
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKV----NFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V N + + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQIRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
Length = 305
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 55/323 (17%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ +V + + + D ++ D ++Y + GGKRLRP+L LA + + + ACA
Sbjct: 22 LARVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACA 81
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IH +L+HDD+ LRRGK + +G ++L GD L + AF ++ +
Sbjct: 82 TELIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEI 141
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD---------VTEEDYLHVIKSKTAVLFSAALEV 179
+ + LA Q + A+L +
Sbjct: 142 PASIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLREMHRLKTGALLQGSVEMG 201
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ V + AL+ YG +G+AFQ+VDD+LD + +GK G+D KPT +
Sbjct: 202 AACAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSL 261
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L +A ++ +L
Sbjct: 262 W--------------------------------------GLDGARAQARQLLAESLAALD 283
Query: 300 C--LPDSSWKKSLMEVVDFCLQR 320
L D++ +L + + R
Sbjct: 284 RSGLADTA---ALRALAHMVVDR 303
>gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
Length = 340
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 4/281 (1%)
Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
K LRP L L A ++ V A A+E H +LLHDDV+D RR + A V+G
Sbjct: 63 KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWTVFG 122
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
+VL GD LL+ AF ++ A LS L G+ L+ + DV + +
Sbjct: 123 TGQAVLAGDSLLALAFDVLSADGPA-AARLLSTAVLDLLHGQHEDLAFEQRTDVEVAECV 181
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L SAA + L+ G + + +G +LG+AFQ VDD+L G+ G
Sbjct: 182 RMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDLLGIWGDPAVTG 241
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K + D R+ K +LPV+ A GT + ++ + L KA ++ E
Sbjct: 242 KPVYSDLRSRKKSLPVVAALASGTSAGQELAMLY--RQPLADDCLAKAAALVDEAGGRSW 299
Query: 283 TEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
+ +A A +L P L + + +R +
Sbjct: 300 SHAQADELLTDALTALTAANPAPRATAELTAIAELITRRDH 340
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 70/328 (21%), Positives = 124/328 (37%), Gaps = 55/328 (16%)
Query: 9 LKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + + + + + + + ++Y + GGKRLRP+L A A + +
Sbjct: 27 QERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRA 86
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
CA+E IH +L+HDD +D+ +RRGK + +G +++L GD L + AF +++
Sbjct: 87 GCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPED 146
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA---------A 176
+ + L Q + +++ +
Sbjct: 147 DGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLKTGALLLGSV 206
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L ++ A AL YG LG+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 207 LMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTF 266
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L L A Q+A
Sbjct: 267 VSLL--------------------------------------GLEAARAHAEQLRQQAHA 288
Query: 297 SL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+L L D+ ++L + D +QR +
Sbjct: 289 ALTRSGLADT---QALGALADMVVQRTH 313
>gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76]
gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399]
gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385]
gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76]
Length = 298
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 131/322 (40%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++L GD L +QAF ++
Sbjct: 76 AIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTEL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ V + A++ +A L
Sbjct: 136 PAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKLVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
D + + L ++ +F + R
Sbjct: 278 PFGDKALR--LRQLAEFAVARK 297
>gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/324 (19%), Positives = 114/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + ++ + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEGLFQPPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLDAAKGYALELRDQALAAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ + ++R +
Sbjct: 274 SLFD--AAAEPLRELARYIVERRH 295
>gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031]
gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031]
Length = 296
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 9 LKDMEKV----NFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V N + + I S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQIRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + A + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A L +P +L + +F + R +
Sbjct: 267 YQSALSELEKIP--FDTTALRALAEFIITRKS 296
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 64/346 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI---CSDVEM------IPDVVKYLIFSGGKRLRPMLTLA 52
+ +N + I + V + + + ++Y + SGGKR+RPML L
Sbjct: 31 SEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCLV 90
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
++ + + ACA+E IH ++L+ DD+ LRRGK V+G +T++L
Sbjct: 91 ACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILAA 150
Query: 111 DFLLSQAFCMVIETKS----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+ L+S A + + S A ++ L G+ L+ + TE++
Sbjct: 151 NALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETEDE 210
Query: 161 YLHV----IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
L KTAVL AA V +++ G + + LKSY +G+ FQ++DDVLD
Sbjct: 211 GLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETK 270
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E+GK G+D GK T P ++
Sbjct: 271 SSEELGKTAGKDLITGKLTYPKVM------------------------------------ 294
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A ++A++ L+ DS L+ + D+ ++R N
Sbjct: 295 --GVENAREYAKRLNREAQEHLQGF-DSDKVVPLLSLADYIVKRQN 337
>gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 168
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/147 (51%), Positives = 97/147 (65%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+I + Y++ SGGKRLRPML L A +Y+G H+ LA IEFIHTATLLHDDVVD S
Sbjct: 2 LINQIGAYIVNSGGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDVVDGS 61
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRR + A VWGN+ SVLVGDFL S++F M++ + ++ LS +AEGE+ QL
Sbjct: 62 ELRRNQETANAVWGNEASVLVGDFLYSRSFEMMVAVEQMRVMDILSHATNRIAEGEVLQL 121
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSA 175
N + +E DY+ VIK KTA LF A
Sbjct: 122 LNVHNPETSEADYMEVIKRKTATLFEA 148
>gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Dictyoglomus thermophilum H-6-12]
gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Dictyoglomus thermophilum H-6-12]
Length = 343
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 4/276 (1%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKRLRP+ + L D+ + + AIEF+H +L+HDD+ D R GK +W
Sbjct: 54 GKRLRPLFCVLVNQTLNGVLDDALEIGSAIEFLHNFSLVHDDIQDQDEKRHGKWTVWKIW 113
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG----ELRQLSLSKNLDVT 157
G ++ VGD L + F ++ KS L + +S K D++
Sbjct: 114 GEAQAINVGDLLFNMVFQVLTNLKSPLLLSKSLKELTETIRELIEGQYLDISFEKRKDIS 173
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
++YL +I KTA LFS + + + A + + + + G N G+ FQ+ DD + G+
Sbjct: 174 LKEYLMMIDKKTAKLFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGD 233
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ GKN D K T P++ + + +EK + ++ ++++ + +
Sbjct: 234 PEKTGKNAFADLWRKKKTYPILYLYSEASDKEKRMIEEIWGRDIVTEKDIEYLLDRLEKK 293
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
R T A Y ++ L D L ++
Sbjct: 294 RVKEATFNLAEKYFGESYKKLLSFQDLYNISLLRKL 329
>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 297
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + + + + + ++Y + +GGKRLRP+LTLA A ML + + A ++E
Sbjct: 14 VEKYLEGCLRNRGIPDSLLQAMEYSLLAGGKRLRPVLTLAWATMLGGDAERVMPFAASLE 73
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+H +DD LRRG+ + + T++L GD LL+++F ++ E L
Sbjct: 74 CIHTYSLIHDDLPAMDDDDLRRGRPSNHKRYDEATAILAGDGLLTESFVLMTEASLIRGL 133
Query: 131 EALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A ++ + G+ + + +V ++ + KT L +AA E
Sbjct: 134 PAERVLRAVSVLAVAAGSGGMVGGQAVDMEFTGRAEVALDELRAMHAMKTGALITAACEC 193
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++AG + + YG +G+AFQ+VDDVLD G+ +GK G D GK T P
Sbjct: 194 GAVLAGASERDVENAREYGRAVGVAFQIVDDVLDVVGDTGTLGKPAGSDEAMGKSTYP-- 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ L + A Y ++A + L
Sbjct: 252 --------------------------------ALV----GLDRSRELAEGYAKEALERLS 275
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
S K L ++ + + R+
Sbjct: 276 SYNGSE-KLFLADLSRYIVDRV 296
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/309 (19%), Positives = 115/309 (37%), Gaps = 42/309 (13%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
VN + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+E
Sbjct: 62 VNKALDSAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEFLALPAACAVEM 121
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IHT +L+HDD+ L+ + + +V
Sbjct: 122 IHTMSLIHDDLPFFGEDVAVLAGDALLSFAFEHLATETPEIISPARVVRAIGELAKAIGS 181
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + ++ + +++H+ KTAVL AA + ++ G N +
Sbjct: 182 EGLVAGQVVDLTSEGMDQNDVGLELLEFIHLH--KTAVLLEAATVLGAIFGGGTNEEIER 239
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++
Sbjct: 240 LRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM------------- 286
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
L ++ A A++ L + K L+ +
Sbjct: 287 -------------------------GLEKSKDFAEKLLSDAQEQLHGFDSNKVK-PLLAL 320
Query: 314 VDFCLQRLN 322
++ +R N
Sbjct: 321 ANYIGKRQN 329
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
Length = 294
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + +D + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPADTVVPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114]
gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114]
Length = 298
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 129/334 (38%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L+ + S+ + + ++Y+ GGKRLRP+L LA + + E
Sbjct: 5 NELKTWQQKAQAQTELLLAHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGE 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ AIE +H +L+HDD+ LRRGK + + T++LVGD L +Q
Sbjct: 65 ANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQ 124
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ A L++++ +A G+ L+ E
Sbjct: 125 AFDVLSRPTGLSAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKT 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + Q L Y LG+AFQ++DDVLD + +GK G+D
Sbjct: 185 GALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADTATLGKTAGKD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT ++ L A
Sbjct: 245 SDNDKPTYVKLM--------------------------------------GLQAARTYAE 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + D + + L ++ +F R N
Sbjct: 267 TLIAEAVALIEPFGDKALR--LRQLAEFVTARKN 298
>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
Length = 298
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L+ + + S+ ++ + + ++Y+ GGKRLRP+L LA + + +
Sbjct: 5 NELKAWQQKAQAQTELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGD 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ AIE +H +L+HDD+ LRRGK + + T++LVGD L +Q
Sbjct: 65 ADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQ 124
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ A +++++ +A G+ L+ +
Sbjct: 125 AFDVLSRPTGLPAEHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKT 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + + + L Y LG+AFQ++DDVLD + +GK G+D
Sbjct: 185 GALIRAAVVLGALACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT ++ L A
Sbjct: 245 SDNDKPTYVKLM--------------------------------------GLQAARAYAE 266
Query: 289 SYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
S +A L K L + +F R N
Sbjct: 267 SLTAEAAALLEPFG---AKALHLRLLAEFVTARKN 298
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 50/309 (16%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S + D ++Y + GGKR+RP L AT ML +A AIE IH +L+HDD
Sbjct: 27 DSSPAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDD 86
Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
+ LRR + + T++L GD L S AF ++ ++ + + L A
Sbjct: 87 LPAMDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAKSPIADQQKILQFQLLANA 146
Query: 142 EGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
G S +K + + E + +H K+ + + L ++Q
Sbjct: 147 SGAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQK 206
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L S+ +G+AFQ+ DD+LD E+GKN G D + K T P +L
Sbjct: 207 LISFSAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLL------------- 253
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
L + +A + AK L L +L +
Sbjct: 254 -------------------------GLAQAKEKASALYYSAKSILSELE--FDTSALAAL 286
Query: 314 VDFCLQRLN 322
+F ++R N
Sbjct: 287 AEFIVKRRN 295
>gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3]
gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3]
Length = 294
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+++ + + +KY + GGKR+RP L T ML + ++ A A+E IH +L
Sbjct: 20 LEQLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAVECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD+ LRRG+ + + T++L GD L + AF ++ E + E+ +
Sbjct: 80 IHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGELNPNAESQRIKM 139
Query: 138 CT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ G+ L + A++ A +
Sbjct: 140 VQALAQASGASGMCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 LEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAMEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
Length = 293
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 77/331 (23%), Positives = 120/331 (36%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + ++V+ I I S + +K+ GGKR+RP L A ML
Sbjct: 1 MLARAISQYQQRVDEQIKSIIDSQATTDLKLQAAMKHGALIGGKRIRPFLVYAIGDMLNV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE +H +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 APEKLDACAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKT 169
F + E + + LA+ + + KT
Sbjct: 121 FESICEPINGITPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLHRLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+E+ + A V + L + +G+AFQ+ DDVLD E+GK G D
Sbjct: 181 GALIRCAVELPMIAAAVTVEEQNLLMDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDC 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A S
Sbjct: 241 DSNKSTYPRLL--------------------------------------GLEGAQATAQS 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L LP +S + + E F ++R
Sbjct: 263 LIDDALSALTKLPYNS--QLIAEFARFIIER 291
>gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
Length = 378
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + + V
Sbjct: 54 LRAAVDRLAPPMDTVAAYHFGWIDAAGRPADGDGGKAVRPALAVLSAEVTGAAPETGVPG 113
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +++E S
Sbjct: 114 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGSV 173
Query: 128 EALEALSLVA---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
EA A + L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 174 EAGRATRRLTAASRALIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 233
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + AL+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 234 GADDRTADALERYGYHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAA 293
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A A ++L
Sbjct: 294 GGPASERLGEILAADAKSSDFANFSEEEFAARAALIEEAGGRDWTAGEARRQHTIAIEAL 353
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ ++ + DF + R
Sbjct: 354 DIVDMPGQVRERFTALADFVVVRK 377
>gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 84/337 (24%), Positives = 138/337 (40%), Gaps = 55/337 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MK ++ L+ +++ + +L ++I +KY +F+GGKRLRP+L T L
Sbjct: 1 MKPFKETLLEKVKETDHELLACFDRKFDTPDIIVSAMKYSLFAGGKRLRPILMKETCRCL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ LACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+
Sbjct: 61 GGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDALLN 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVI 165
A I + + ++ +N + EE ++
Sbjct: 121 YAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT L AA+ +A V R AL++Y +G+AFQ+VDD+LD G+ +GK +
Sbjct: 181 AHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T + + ++
Sbjct: 241 GSDEKNHKSTFVSLY--------------------------------------GMASSQE 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A D+L + L ++ + QR N
Sbjct: 263 KIRELENGALDALATIDH--DTSFLEDMAKYICQREN 297
>gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946]
gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946]
Length = 332
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 67/323 (20%), Positives = 131/323 (40%), Gaps = 15/323 (4%)
Query: 13 EKVNFLILKRICSDVEMIP-DVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV 65
++ +L+ + + + ++ +Y GGK LR ML + L R + +
Sbjct: 8 AQIQARMLEALPHPDQAVRAELAEYARMLRDYPERGGKMLRGMLLVYAGLAHGARLEQLL 67
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIE 123
+A A+E L+HDD+ D S RRG+ A ++G ++ GD A +
Sbjct: 68 PVAAALELFQNWALIHDDIEDASEERRGRPALHRLYGMPLALNAGDALHARMWAMLIEAR 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
E + +V T L + + E ++ ++ A ++A +
Sbjct: 128 ASYLVLDEFVRVVDLTAQGQHLEMSWMQTHRFDLTEQDYLLMCAQKAAYYTAVAPLRLGA 187
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+NLGI FQ+VDDVL+ G+ + GK I D GK TL ++
Sbjct: 188 LSAGVEPPATYIEAGLNLGIGFQIVDDVLNLEGDPVKYGKEIAGDLWEGKRTLILLRWLS 247
Query: 244 RGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS---- 297
+ ++ E+ ++ + E + +RE+ A+ + A ++
Sbjct: 248 QASEPERIRAETLLRTPREAKHPEEVAWLHQRLRESGAVAYAQAEAERRLAAGLEALRPV 307
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L LPD ++++ +++ ++R
Sbjct: 308 LAELPDQEAAQTMLRLLESLVRR 330
>gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 295
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 66/334 (19%), Positives = 118/334 (35%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLK---DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M L+ + D+E++ L+L + + +++ F+GGKRLRP L + +A
Sbjct: 1 MVDLQAALAECAEDVERMMDLLLPQPEGAEARLYSAMRHSAFAGGKRLRPFLVMQSARQF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLS 115
+A A+EF+HT +L+HDD+ +RRG+ + + T++L GD L +
Sbjct: 61 GVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDALQA 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AF ++ ++ + + LA + + + + L
Sbjct: 121 LAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRLQRL 180
Query: 176 ALEVSSLIA--------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ AL +Y G+AFQ+VDD+LD G+ +GK G
Sbjct: 181 KTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGDSEWIGKPTGR 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T +L +A
Sbjct: 241 DAEAGKATFVSVL--------------------------------------GAERARSQA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A +L + + L E + + R
Sbjct: 263 GLLIDQAITALDLFDEKA--DLLREAARYVVART 294
>gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 360
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 66/342 (19%), Positives = 125/342 (36%), Gaps = 34/342 (9%)
Query: 13 EKVNFLILKRICS--------DVEMI--PDVVKYLIFSGGKRLRPMLTLATAL-MLEYRG 61
++++ + + + D ++ + ++ + GGKRLRP
Sbjct: 17 QRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVDS 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------------- 105
D V A+EF+ + L+HDD++D S RRG+ A + +
Sbjct: 77 DQVVATLAALEFVQASALIHDDLMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAA 136
Query: 106 SVLVGDFLLSQAFC--MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
++L+GD L + A + E + Q +
Sbjct: 137 AILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTVGQYLDVLTQATGDTSLDR 196
Query: 164 VIKSKTAVLFSAAL----EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
K + + + +AG V A +YG+ LG AFQL DDVL G+
Sbjct: 197 AAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDPE 256
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK G+D R GK T V A + + + + + + + ++ + A
Sbjct: 257 RTGKPAGDDLREGKRTYLVAAALEALDPAGREALLAGLGVPDLDAAGVDRLRELITTSGA 316
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
L E + + A +L + D+ +++L+++ +R
Sbjct: 317 LDRAERHITALTKSALAALTAVDLDTEARQALVDLAIAATRR 358
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 126/332 (37%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + + V + K + + D ++Y + GGKR+RP+L+ A +
Sbjct: 4 DFQSWASEQLALVETCLEKHLPETNCAPARLHDAMRYSVLGGGKRVRPLLSFAAGELSGA 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A+E IH +L+HDD +D+ LRRGK + + T++LVGD L S A
Sbjct: 64 DKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLVGDSLQSLA 123
Query: 118 FCMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ ET E + +A G+ L E I
Sbjct: 124 FQLLTETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKT 183
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + + + L + +G+AFQ++DD+LD +GK G+D
Sbjct: 184 GALIRAAVILGARCGNRLDETQFKLLDHFAKCMGLAFQVIDDILDTEATTAALGKTAGKD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT IL + A+
Sbjct: 244 AENNKPTYVSIL--------------------------------------GIKQARELAH 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A L + + L +V DF +QR
Sbjct: 266 ELRQEATGVLNQFGSEALR--LQQVTDFIVQR 295
>gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative
(AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans
FGSC A4]
Length = 456
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR +A + +GN+ +VL GDFLL +A +
Sbjct: 194 PSQRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVAL 253
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E E L+ V L EGE QL + + I KTA L S
Sbjct: 254 ARLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLIS 313
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 314 KSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLA 373
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + + +G +++KA ++ + T A Y KA
Sbjct: 374 TAPLLFAWKQHPELGPLVGRKFCREG-----DVEKARELVYRANGVEQTRALAQEYADKA 428
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 429 IAAISPFPDSEAKAGLIEMCRKTMNR 454
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 83 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQA 132
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + VN + + + E + + ++Y + +GGKR+RP+L LA ++
Sbjct: 21 DFQRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDA 80
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ACA+E IHT +L+HDD+ LRRG+ + + +G T++L GD L + AF
Sbjct: 81 AAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFE 140
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY----------LHVIKSKT 169
V + A + G V +++ ++ KT
Sbjct: 141 HVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKT 200
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L AA +++ G ++ + ++ Y +G+ FQ+VDDVLD ++GK G+D
Sbjct: 201 ARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDV 260
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + A
Sbjct: 261 EADKATYPKLL--------------------------------------GVDKAREYAAD 282
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+ L D+ L + F R +
Sbjct: 283 LLAMAEAELDGF-DAERAAPLRHLARFIAYRQH 314
>gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
Length = 1092
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR +A + +GN+ +VL GDFLL +A +
Sbjct: 823 PSQRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVAL 882
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E E L+ V L EGE QL + + I KTA L S
Sbjct: 883 ARLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLIS 942
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 943 KSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLA 1002
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + + +G +++KA ++ + T A Y KA
Sbjct: 1003 TAPLLFAWKQHPELGPLVGRKFCREG-----DVEKARELVYRANGVEQTRALAQEYADKA 1057
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 1058 IAAISPFPDSEAKAGLIEMCRKTMNR 1083
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + I + + S + V KY S GK +RP+L L +
Sbjct: 712 IVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQA 761
>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
Length = 295
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/325 (19%), Positives = 121/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + +++ + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEPLFIAPSKELQRLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + ++L GD L S AF +++
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLS 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++++ L + G+ L + A++ ++
Sbjct: 131 PQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A + + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKVYAIELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ + L + + ++R N
Sbjct: 273 LQGF--GETAEPLRALARYIVERRN 295
>gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 128/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E V+ + + + I + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 72 ESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAV 131
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +DD+ LRRGK +G +VL GD LL+ AF + +
Sbjct: 132 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLV 191
Query: 130 LEALSLVACT------------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + DV E + KTA L AA
Sbjct: 192 APERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAA 251
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P
Sbjct: 252 VLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYP 311
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A ++A +
Sbjct: 312 RLI--------------------------------------GLERSREVAEKLRREAAEQ 333
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L DS L+ + + R N
Sbjct: 334 LLGF-DSDKAAPLVALASYIACRHN 357
>gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
Length = 365
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 12/292 (4%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + + V A A+E +H +LLHDD++D RR + V
Sbjct: 72 GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 131
Query: 101 WGNQTSVLVGDFLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + + ++ A L+ L +G+ + +S VT
Sbjct: 132 HGPAQAILVGDALFALAGEILLELGTVEAGRATRRLTSATRKLIDGQAQDISYEHRERVT 191
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+
Sbjct: 192 VAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLLGIWGD 251
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--------GKISVENLKK 269
+ GK D R K +LPV+ A G + + + D E
Sbjct: 252 PDATGKQTWSDLRQRKKSLPVVAALDAGGEASERLARLLAADAKKTEAEFADFDEEEFAA 311
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
++ + T A A +L + + + L+ + DF + R
Sbjct: 312 RAALIEQAGGRDWTSQEARRQHATAVAALDQVEMEDRVRAQLVALADFVVVR 363
>gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
Length = 379
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + V
Sbjct: 55 LRAAVARLAPPMDTVAAYHFGWIDAQGRPADGDGGKAVRPALAVLSAEVTGAAPQTGVPG 114
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 115 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 174
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A L+ + L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 175 DAGRAARRLTTASRALIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 234
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G +L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 235 GADERTADSLEKYGYHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAS 294
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + D S E ++ E T A A ++L
Sbjct: 295 GGPASGRLGEILAADAKSSDFANFSEEEFAARAALIEEAGGREWTAEEARRQHTIAIEAL 354
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD ++ + DF + R
Sbjct: 355 DAVDMPD-RVREQFTALADFVVVRK 378
>gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
Length = 342
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L + +A + V
Sbjct: 18 LRAAVARLAPPMDTVAAYHFGWIDAQGRPADGDGGKAVRPALAVLSAEVTGAAPQTGVPG 77
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 78 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 137
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A L+ + L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 138 DAGRAARRLTTASRALIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLG 197
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G +L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 198 GADERTADSLEKYGYHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAS 257
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + D S E ++ E T A A ++L
Sbjct: 258 GGPASGRLGEILAADAKSSDFANFSEEEFAARAALIEEAGGREWTAEEARRQHTIAIEAL 317
Query: 299 R--CLPDSSWKKSLMEVVDFCLQRL 321
+PD ++ + DF + R
Sbjct: 318 DAVDMPD-RVREQFTALADFVVVRK 341
>gi|213422747|ref|ZP_03355795.1| hypothetical protein Salmonentericaenterica_35292 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 99
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+
Sbjct: 35 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 94
Query: 61 GDNHV 65
G+ HV
Sbjct: 95 GNAHV 99
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 55/325 (16%)
Query: 10 KDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
+E+V + + + + + D ++Y + GGKRLRP+L L+ A + + +
Sbjct: 12 DRLEQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRA 71
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
AC++E IH +L+HDD+ LRRGK + +G ++L GD + + AF ++
Sbjct: 72 ACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGDAMQALAFEVLTPED 131
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAAL 177
L + + LA + + E+ + + KT L A++
Sbjct: 132 DSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLSDMHRRKTGALLQASV 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + RQAL YG LG+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 192 MMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAGKDADQNKPTYV 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + RA + ++A+ +
Sbjct: 252 TVL--------------------------------------GLSAAQRRAQTLREQAQAA 273
Query: 298 LRC--LPDSSWKKSLMEVVDFCLQR 320
L LPD++W L + D ++R
Sbjct: 274 LARSGLPDAAW---LSVLADKVVER 295
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
Length = 294
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLEASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 84/331 (25%), Positives = 134/331 (40%), Gaps = 53/331 (16%)
Query: 2 KMLEDLTLKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L ++E V+ + + I + + Y + +GGKRLRP+L LA+ + +
Sbjct: 5 EKLRTY-QSEIESAVDQYLPAE-ATRPSRIHEAMLYSMRAGGKRLRPVLVLASKELFDSE 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + A A+E +HT +L+HDD+ DD LRRGK + + T+VL GD LL+ AF
Sbjct: 63 LD-AMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAF 121
Query: 119 CMVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ + +LV G + L + ++E+ + +KT+
Sbjct: 122 QLLARHFANAPDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTSA 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L L + +I G AL++YG +GIAFQ++DD+LD + MGK+IG D
Sbjct: 182 LIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDETTMGKSIGSDAEL 241
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T + L + A
Sbjct: 242 DKTTYVKLH--------------------------------------GLEKSRELAAQRT 263
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
QKA LP + L + RLN
Sbjct: 264 QKAIQICSALPSGAP--FLAGLATHLENRLN 292
>gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 55/322 (17%)
Query: 14 KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVL 66
+ + + + S + + ++Y GGKR+RP+L A + +
Sbjct: 17 RTEQTLDRLLDSAQTIPHRLHEAIRYAAQGGGKRIRPLLVYAAGQLGNKSDVVPVEFLDA 76
Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A AIE IH +L+HDD+ LRRG+ + T++LVGD L ++AF ++ T
Sbjct: 77 AAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQTRAFEILANT 136
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNL------DVTEEDYLHVIKSKTAVLFSAALE 178
+ + A G + + + KT L S A+E
Sbjct: 137 NGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHAMKTGALLSCAVE 196
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + A + + L+SY +LG+AFQ+VDDVLD + +GK G+D KPT
Sbjct: 197 LGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQTLGKTAGKDAAANKPTYVT 256
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + +A + A SL
Sbjct: 257 LM--------------------------------------GLDYAQKQAKELQEVAIASL 278
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
S+ ++L ++ + R
Sbjct: 279 DSFGASA--QALKDLALLVVNR 298
>gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
Length = 296
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 126/333 (37%), Gaps = 55/333 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++VN + + + + + + + ++Y +GGKR+RPML L M +
Sbjct: 4 SERIEDIAKRVNEALNRFLPTAEGPQKRLFEAMRYSAMAGGKRVRPMLVLEFCRMCGGKE 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ RRG+ + + + T++L GD LLS AF
Sbjct: 64 EQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALLSLAFE 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKN----------LDVTEEDYLHVIKSKT 169
+ Q + A + + + + E + + KT
Sbjct: 124 TGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLELLETMHRGKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ AA ++AG + QA +Y LG+AFQ+VDD+LD G +GK G D
Sbjct: 184 GAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILDVTGNSQTLGKPAGSDV 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T L L + A
Sbjct: 244 GNRKSTYVTHL--------------------------------------GLEEARRLAGR 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A D LR + L + L R +
Sbjct: 266 LSQEAVDCLRVF--GEERAFLSDFTLRLLNRDH 296
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ L + + V + + + + + Y + +GGKRLRP+L L+ A +
Sbjct: 6 EAMKSLLKERGKLVESYLATCLDGQEMPPRLRESMLYSLQAGGKRLRPVLCLSCAALCGL 65
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ++ + A AIE +HT +L+H +DD LRRGK + + T++L GD LL+ A
Sbjct: 66 KAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDALLTDA 125
Query: 118 FCMVIETK-------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F + + A A + + + G+ + + V+ + + KT
Sbjct: 126 FAHMCRVELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAELRRMHAMKTG 185
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ +L+AG + V + + YG LG+AFQ+ DD+LD + +GK G D
Sbjct: 186 ALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSDTATLGKPAGSDAE 245
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P ++ L ++ A
Sbjct: 246 QGKNTYPALV--------------------------------------GLDESRRLAREQ 267
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L + + L + ++ + R
Sbjct: 268 ADAACAALAGF-NGPEAEFLRALAEYTITR 296
>gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
Length = 305
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ N +L I + + ++Y GGKRLRP L AT M A
Sbjct: 18 QRANNALLSFIAPLPFNHSDLVQAMRYGTLLGGKRLRPYLVYATGQMFGVPLATLDAPAA 77
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ +
Sbjct: 78 AVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMP 137
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L+ + E A++ +A
Sbjct: 138 DVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTELEKIHRHKTGALIRTAVR 197
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L Y +G+AFQ+ DD+LD G+ ++GK G D + GK T P
Sbjct: 198 MAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTAKIGKRQGADQQLGKSTYP 257
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A+ Q+A +
Sbjct: 258 ----------------------------------ALL----GLEAAQTKAWDLYQEALAA 279
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQRLN 322
L L + S+ SL + F ++R N
Sbjct: 280 LDTLAEQSYDTTSLRALASFIIERDN 305
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 76/337 (22%), Positives = 131/337 (38%), Gaps = 57/337 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATAL---M 56
+++ + V + + + + + ++Y +F+GGKR+RP+L LA A
Sbjct: 2 NIKNYLEQKRSLVEEAMDRFMLEESGPFKKHIEAMRYSLFAGGKRIRPILCLAAADSICA 61
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLL 114
E +N + +ACA+E IHT +L+HDD+ LRRGK +++G ++L GD LL
Sbjct: 62 QERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLL 121
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S AF ++ + L C + L + + + I T
Sbjct: 122 SWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLATIH 181
Query: 175 ---------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
++ ++ AG AL+ YG N+G+AFQ++DD+LD E+GK
Sbjct: 182 RSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKTA 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +GK T P+ + T
Sbjct: 242 GSDAEHGKATYPLFF--------------------------------------GIDKTRE 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + A +L + L + ++ R N
Sbjct: 264 KAKAAVDNAIKALTLFDHRA--DPLRGLANYIYSRTN 298
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 50/320 (15%)
Query: 15 VNFLILKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V+ + + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+E
Sbjct: 75 VHKALDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAACAVEM 134
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD +D+ RRGK V+G +VL GD LL+ AF V +
Sbjct: 135 IHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSSRTEGASPA 194
Query: 132 A---------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
S+ L G++ ++ + D+ + + KTA L A++ + ++
Sbjct: 195 RVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHIHKTAALLEASVVLGAI 254
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G ++ + L+++ +G+ FQ+VDD+LD E+GK G+D K T P +L
Sbjct: 255 LGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLVDKTTYPKLL-- 312
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + A +AK L
Sbjct: 313 ------------------------------------GLDKSRQFAEELLAEAKQQLEEFE 336
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ L+ + ++ R N
Sbjct: 337 SQAAVAPLLALAEYIAYRQN 356
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 51/318 (16%)
Query: 15 VNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ ++ + + S+ +++ D ++Y + GGKR+R +L A A + ACA+
Sbjct: 25 IEIVLDEALPSETTAPQVLHDAMRYSLLGGGKRVRALLCYAAAELCATNATIADAAACAV 84
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH +L+HDD +D+ LRRGK + + + T++LVGD L S AF ++ E+
Sbjct: 85 EMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLSTPTLCES 144
Query: 130 LEALSLVACTLAE------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA+ Q ++ + K
Sbjct: 145 ANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQAAALLGA 204
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ A+ Y ++G+AFQ+VDD+LD + + +GK G+D + KPT IL
Sbjct: 205 SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNKPTYVTIL--- 261
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + A + A +L
Sbjct: 262 -----------------------------------GLDQAKKLADQLYETAISALTPFG- 285
Query: 304 SSWKKSLMEVVDFCLQRL 321
+ K+ L E+ F L R
Sbjct: 286 NDAKR-LRELAGFILHRS 302
>gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 368
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 9/309 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--- 59
LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + +
Sbjct: 11 QLEARIVPALQAIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALA 70
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A
Sbjct: 71 AGEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQ 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + + L G+L + + + Y+ V+ KT L + +
Sbjct: 131 LVAALGPEAVMAHAKTFER-LCMGQLHETLPRPSGTDPVDHYIQVLADKTGSLIAVSARY 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ G + ++ +G +G+AFQL DDV+D + GK G D R G T+PV+
Sbjct: 190 GAMLTGAGVRTERIVEEFGEKIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPVL 249
Query: 240 LAFQ-----RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
L + + L +RE+ L T A ++ +A
Sbjct: 250 LLRKALAAGELDAAGQAILSRLSTGDLSDDAFLADVVARLREHPVLARTREMAMAWAAEA 309
Query: 295 KDSLRCLPD 303
L L +
Sbjct: 310 VQGLEGLEE 318
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLEASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
Length = 337
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
V++ + S GK +RP L + + + A IE H+A+L+HDD+VD++
Sbjct: 46 VLQDAVSSQGKMIRPRLVIMAGSFGKRYAEAEERLYKAAALIEMTHSASLIHDDIVDEAP 105
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRGK + + +G +V GDFL+S+ +++ ++ L+ + GE+ Q
Sbjct: 106 LRRGKPSVQRRYGKSAAVYAGDFLMSRITYHLMQEGLMQSGMVLAKAVEAMCAGEITQAL 165
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
DVT +YL I KT LF AA + +L +G S+ + L++ G LG FQ+ D
Sbjct: 166 CRYRADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMFQMRD 225
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLK 268
D+LD+ ++GK +DFR G T+PV+ A + R+ + G ++ +++
Sbjct: 226 DLLDFLPVTEQIGKASHQDFREGIYTMPVLYACETPQGRKMLRPYMERSVQGCLTGQDIA 285
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + + T +KA+ L LP S L+++V
Sbjct: 286 EMERQVAALGGMERTWQAIREQQKKAERILADLPSHSASPQLLKLVRKL 334
>gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305]
gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia
pseudomallei NCTC 13177]
gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305]
gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
Length = 363
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 14/328 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62
L + + + + + + ++Y + GK++RP+L L A + G
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTG-LEYETYQRGKKIRPLLLLLAASLFRADGARRA 83
Query: 63 ----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ A ++E +H ATL+HDD++D + LRRG + G ++LVGD QA
Sbjct: 84 PLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGDLQFIQAI 143
Query: 119 CMVIETKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ +A A + E + R + +++ Y V KTAVL
Sbjct: 144 RVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVADRKTAVL 203
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F A E+ + ++G +AL YG +LGIAFQ++DDV D+ GK D
Sbjct: 204 FGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDFLHPQASAGKAPQADIAAR 263
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TLP+I A + + L +A + ++ LVD A +
Sbjct: 264 CLTLPIINAMEELGDAHELTRIMRGAVAAPEPAALDRAARAVERSQGLVDAYRAARRHAL 323
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A D L+ L D +++L + + + R
Sbjct: 324 QAADCLQGLADRPERRALESIASYVVDR 351
>gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii
PYR-1]
Length = 359
Score = 86.2 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 76/328 (23%), Positives = 122/328 (37%), Gaps = 27/328 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTAT 78
I + ++ + V+ + GGKRLRP + G + L A+E +H
Sbjct: 31 AYIGAGYAVLTEAVEEFVLRGGKRLRPAFAYWGWRAVAGTEPGPEALRLFSALELLHACA 90
Query: 79 LLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQAF--------------- 118
L+HDDV+D SA RRG N F LS A
Sbjct: 91 LVHDDVIDASATRRGLPTVHRIFAERHRSNNWLGSSEQFGLSAAILLGDVALVWADDIVA 150
Query: 119 --CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +E + ++ L L ++ + + I + S
Sbjct: 151 SAEIGVEAHRRVQRVWAAIRTEVLGGQYLDIVNEATGAETVASALTVNIYKTASYTISRP 210
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ + A V A G +LG+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 211 LQLGAAAAADCPEVLSAFHELGTSLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 270
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ A + K ++ K ++ +K+ +++ AL E R + ++A
Sbjct: 271 LLAEAVELAEKHDQIAAKLLRTSIGTDLTDAQVKEVCLVIESVGALAAVESRIDTLTRRA 330
Query: 295 KDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
D L P D K L E+ R
Sbjct: 331 LDILNSAPIDVQAKAGLAELARMAANRS 358
>gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
Length = 294
Score = 86.2 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M + + ++ + + + + + ++Y + SGGKR+RP+LTL T +
Sbjct: 1 MDGFKAILKSKAAELENSLEELMELKEDELAPELSEAMRYTLLSGGKRIRPILTLLTTEL 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLL 114
L+ + A+E IH+ +L+HDD+ LRRGK LV+G ++L GD LL
Sbjct: 61 LKGDYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALL 120
Query: 115 SQAFCM------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ AF + K + S G ++ +++ + + +K
Sbjct: 121 TYAFEILSELELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + + ++AL+ Y NLG+ FQ+VDD+LD G+ ++GK +G D
Sbjct: 181 TGALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ K T P +L + A
Sbjct: 241 QKLDKSTYPKLL--------------------------------------GVDGAREAAV 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Y +KAK+SL + L+++VD+ L R +
Sbjct: 263 EYAKKAKNSLAIFE--EEAEPLIKLVDYVLSRQH 294
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 60/341 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + VN + I + + D ++Y + +GGKR+RP L LA ++
Sbjct: 60 NFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGGP 119
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E +HT +L+H +DD LRRGK +V+G +VL GD LLS +F
Sbjct: 120 ESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSF 179
Query: 119 CMVIETKSQEALEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYL 162
+ S + ++ L ++ + L
Sbjct: 180 HHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLELL 239
Query: 163 HVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
I KTA L A++ + ++I G + +AL+ Y ++G+ FQ+VDD+LD E+
Sbjct: 240 EYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEEL 299
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D + K T P +L L
Sbjct: 300 GKTAGKDLASDKTTYPKLL--------------------------------------GLA 321
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A A + L C + L+ + ++ R N
Sbjct: 322 KSREFAEKLVSDATEQLACFDEEKA-APLLHLANYIAHRQN 361
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 128/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + ++
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAEA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLEASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 298
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 56/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ + EK++ + + +D E++ + Y + +GGKR+RP+L TA L
Sbjct: 5 ELKQIFESKKEKIDTYLENILNNDEIPEVLCQCIAYSLLNGGKRIRPVLCQITAEKLGID 64
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + LA AIE HTA+L+HDD +D+ RRGK+ V+G +VL GD LL+ F
Sbjct: 65 PDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAGDSLLAYGF 124
Query: 119 CMV-----------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ + + + ++ C + G+ ++ + E + + +
Sbjct: 125 ELCLQELPRLGFTQSNILNALKIFSHAIGPCGICGGQALDITQEGHEGEEEFLW-KMCEL 183
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L A++ S+ + G L +YG +LGI+FQ++DD+LD G ++E+GK G+
Sbjct: 184 KTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILDVTGTISELGKTPGK 243
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T + L + A
Sbjct: 244 DAKEGKLTFVALH--------------------------------------GLERAKELA 265
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+KA DS+ LP + +++ ++ +R
Sbjct: 266 MEETKKAIDSI--LPLGPDFEVFLDIAEYIARRS 297
>gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC
25259]
gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259]
Length = 296
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 81/335 (24%), Positives = 129/335 (38%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M T ++ ++ +R+ + + + ++Y + GGKR+RP+L A +
Sbjct: 2 MSDFSAWTQACQARIEHVLAERLPPSDIAPKRLHEAMRYAVLGGGKRVRPLLAFAAGDVT 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IH +L+H +DD ALRRGK + + T++LVGD L S
Sbjct: 62 GAAVEQVQHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEPTALLVGDALQS 121
Query: 116 QAF---------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF + L A + + +A G+ L+ E I
Sbjct: 122 LAFDILASPGLAQAASTQLAMVQLLARASGSRGMAGGQAIDLANVGKSLDLTELEFMHI- 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A++ + + + R AL Y +G+AFQ+VDDVLD +GK G
Sbjct: 181 HKTGALIRASVLLGAECGTLSEPARTALDHYAKCIGLAFQVVDDVLDAEASTATLGKTAG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D N KPT +L + R
Sbjct: 241 KDAANNKPTYVSLL--------------------------------------GVQRARER 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A A +L L S+ + L E+ DF ++R
Sbjct: 263 ALELRADACAALDPLGPSARR--LRELADFVVERT 295
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAESAVPTRLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
Length = 364
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 124/334 (37%), Gaps = 31/334 (9%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIEFIHT 76
I+ I D++ I + L+ +GGKRLR ++ V A+E
Sbjct: 32 IMSGISPDIDPIMGSISNLV-TGGKRLRALMCYWGWRGAGGDAGAAEVVTAGAALELFQA 90
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVL----------------VGDFLLSQAFCM 120
A L+HDD++D S RRG + + GD LS +
Sbjct: 91 AALIHDDIIDRSDTRRGGPSVHRRFSQLHEAQGWALDSGRFGQAAAILAGDLCLSFSEEA 150
Query: 121 VIETKSQ---------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--KSKT 169
+ + + V L +++ I
Sbjct: 151 FTDIGERAASGSRARLIFNLMRAEVMAGQYLDILEEVAGPVRDRAGAVSRAQSIIRFKSA 210
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + +AG N + + ++ + LG AFQL DDVL G+ GK G+D
Sbjct: 211 KYSTEHPLALGGALAGATNDLLRGYSAFALPLGEAFQLRDDVLGVFGDPLTTGKPAGDDL 270
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R GK T+ V LA + + E F S + ++ ++++ I+ ++ AL TE
Sbjct: 271 REGKRTVLVALALDQASPAESAFIDSRLGSPELDDGDVQEIRRIIEDSGALQATEVLIGE 330
Query: 290 YGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
YG A +L LP D K +L + + + R +
Sbjct: 331 YGNAAYGALEALPLDELPKTALRRLAEATVSRAS 364
>gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 7/307 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHT 76
+ I D+E + + GK +RPML L A +E + + A IE +H
Sbjct: 59 QEIIQGDIESLNKASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAAVIEILHV 118
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDD++D S RRG ++ ++G + ++L+ +A + E + S +
Sbjct: 119 ASLVHDDILDASDTRRGIPSSHTIFGKHRATFSANYLIGRAGRKISELDDIRMFQIYSQI 178
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS---VRQA 193
L GE Q K+ E + + + + + N + +
Sbjct: 179 MDNLTNGEYLQAMKQKSFHNFEITLQNYMIKTYYKTAALIANSLQGVCQLTNIKDEICEK 238
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ G++LG+AFQ++DDVLDY ++GK D ++G T PV+ K++ +
Sbjct: 239 SFNIGLHLGVAFQIIDDVLDYTSNSEQLGKASLNDLKSGVLTGPVLFELFNQQKKQSPEY 298
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
K + I+ + ++Y AY + Q+A L+ + + L+ +
Sbjct: 299 KLMNSVLLGESNQYDTVNQIVLAGEGIEQSKYLAYQHTQEALKILQSINSQPDQD-LISL 357
Query: 314 VDFCLQR 320
+ + R
Sbjct: 358 IFMFIDR 364
>gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
Length = 362
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 119/332 (35%), Gaps = 33/332 (9%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
I + + ++ + GGKRLRP LT + + A A+EF A LLH
Sbjct: 32 IDPAADELAQAIE-SLMQGGKRLRPGFLTWGHVAAGGSADEATLQAATAMEFFQAAALLH 90
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVL------------------VGDFLLSQAFCMVIE 123
DDV+DDS RRG AA VW + + + A
Sbjct: 91 DDVMDDSDTRRGTPAAHRVWAQRHREHAFEGSPEDHGIAGAILAGDLCLVWADAAFTGCG 150
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ L A + Q N E + + I
Sbjct: 151 WEPEQMLRARPTWNLMRTQLMAGQFLDILNAARPWETLDTDARHERVRRVMQYKSAKYSI 210
Query: 184 AG----------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
V + RQ L YG++LG+AFQL DDVL G+ + GK G+D R GK
Sbjct: 211 EHPLLIGADAAGVDPTTRQHLSDYGLHLGLAFQLRDDVLGVYGDPSVTGKPAGDDLREGK 270
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T V+ + + + +S E+ ++ + A E + + +
Sbjct: 271 RTALVVGVLAGADPADAERFTHLLGSPDLSAEDTTWMRDLITSSGAADQVEQQIDTDRDR 330
Query: 294 AKDSLRCLP---DSSWKKSLMEVVDFCLQRLN 322
A +L D+ ++L+E+ +R +
Sbjct: 331 ALAALERARPTLDTEAVEALVELAHLTTRRAS 362
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 56/326 (17%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+++V + +++ +D + ++Y + GGKRLRP+L LA A ++ + + ACA
Sbjct: 14 LDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAACA 73
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD +D+ LRRGK + +G ++L GD + + AF ++ + +
Sbjct: 74 VELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDTDD 133
Query: 129 ALEALSLVACTL----------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ G + E + KT L A++
Sbjct: 134 GVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQASVL 193
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + QAL YG +G+AFQ+VDD+LD +GK G+D KPT
Sbjct: 194 MGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDADQNKPTYVS 253
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L L RA S +A +L
Sbjct: 254 LL--------------------------------------GLEGARERAQSLHAQAHAAL 275
Query: 299 RCLPDSSWKKS--LMEVVDFCLQRLN 322
++ + L + D ++R +
Sbjct: 276 ER---GAFADARWLATLADRVVERDS 298
>gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 334
Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 3/324 (0%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLAT-ALMLE 58
+ DL +++K +I++ + I D + L GKR+R +L L +
Sbjct: 12 LSQARDLVKVELDKTEQVIMQVAKNAPAGISDRLVTLFSRKGKRIRSTLLCLLANCGAQK 71
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D A+E +H A+L+HDD++D + +RRG+ A WG Q +VL+GD++LSQ+
Sbjct: 72 PDIDRVAHACAAVELLHLASLVHDDIIDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSM 131
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
VI+ +++ +S A L GE+ +L ++ ++ + Y +I KTA L AA
Sbjct: 132 RCVIDEQARNIPVIISDAADKLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAAAR 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++AG + G + GIAFQ++DD+LDY M K D NG TLP+
Sbjct: 192 IGGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLDYGYGSVNMDKAKFTDLSNGLITLPL 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ F+ T E+ + I +K + ++ + A + ++A
Sbjct: 252 LYYFEDCTAEERREMEGFIAKASA-EGIPEKIQDRLFAKKSFAKAKAEAQEHLEQALAIA 310
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
P S++ + + + R N
Sbjct: 311 DKFPKSNFTEEITAMFASMSDRGN 334
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 69/339 (20%), Positives = 118/339 (34%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDM-----EKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
M + L D +++ + + S + + D ++Y + GGKR+RP L LA
Sbjct: 1 MNTITRLPASDFLQHCRAEIDQQLADYMDQASASQRLQDAMRYGLLGGGKRIRPALCLAA 60
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQ 104
A + + + ACA+E IH +L+HDD+ + A
Sbjct: 61 AEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGD 120
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+L+ A + E K + G S +T + ++
Sbjct: 121 ALQAEAFRVLATAPRLSAEVKLAMVKALANACGANGMVGGQAIDLESVARTLTLDQLENM 180
Query: 165 IKSKTAVLFSAALEVSS-LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A++ + + ++ AL Y LG+AFQ+ DD+LD G+ MGK
Sbjct: 181 HRHKTGALIEASVHLGALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTEVMGK 240
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G D GKPT P +L +
Sbjct: 241 TQGSDIARGKPTYPALLGPKG--------------------------------------A 262
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +SL+ L +L + D+ + R +
Sbjct: 263 RELLARLLAEAHESLKGL--GIQADALHAMADYIVARSH 299
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 130/325 (40%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E V+ + + + I + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +DD+ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVACT------------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + T + DV E + KTA L AA
Sbjct: 195 APERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++I G Q L+ YG +G+ FQ+VDD++D E+GK G+D + K T P
Sbjct: 255 VLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVKARKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A ++A +
Sbjct: 315 RLI--------------------------------------GLERSREVAEKLRREAAEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L+ + + R N
Sbjct: 337 LLGFDSNKV-APLVALASYIACRHN 360
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ ++V+ I + + E + + ++Y IF+GGKRLRP+L ++ + E
Sbjct: 6 NLKNYIKFFAQRVDDWIRNYLTYENEQTIGLIESMRYSIFAGGKRLRPVLIYSSYGIFES 65
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D A A+E +HT +L+H +DD LRRGK ++G T++L GD LL+ A
Sbjct: 66 YFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDALLTLA 125
Query: 118 FCMVIETKSQEALEALSLVACTL----------AEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++++ + + +++ G +++N ++ + + K
Sbjct: 126 FEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLDFIHKH 185
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L S E+ +++ +Q L +G +G+AFQ+VDD+LD E+GKN G
Sbjct: 186 KTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELGKNAGS 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T P I L ++ A
Sbjct: 246 DLKNKKATYPEIY--------------------------------------GLEKSKSIA 267
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + L+ P L+E+ ++ L+R N
Sbjct: 268 EDLINSAINILK--PYGKAATPLIEIANYILKRNN 300
>gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 63/324 (19%), Positives = 111/324 (34%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALI----GLQAAKGYALELRDQALGAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ L E+ + ++R +
Sbjct: 274 ADF--GPQAEPLRELARYIVERRH 295
>gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 301
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ VN + + + S + + ++Y+ GGKRLRP L + +A + + +AC
Sbjct: 19 QAVNSELDRLLPVSESPDSRVHEAMRYVTLDGGKRLRPFLVMQSASLFNVAESAAIRVAC 78
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+H +DD LRRG+ + T++L GD LL++AF +++ +
Sbjct: 79 AIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLAGDALLTKAFEVLVNPATH 138
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSKTAVLFSAALEV 179
+ LA Q + + + + + KT LFS + E
Sbjct: 139 ADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGITRLQQLKTGRLFSFSCEA 198
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ +R AL++Y +LG+AFQ+ DD+LD G+V E+GK + +D GK T +
Sbjct: 199 GAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDVAEVGKRVNKDADAGKATFVSL 258
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + +A ++A L
Sbjct: 259 L--------------------------------------GLERAKSQADMLAEQACRHLD 280
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ +V F ++R +
Sbjct: 281 PF--GEKADLMRDVARFVVRRRS 301
>gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(GGPS) [Includes: Dimethylallyltranstransferase ;
Geranyltranstransferase ; Farnesyltranstransferase ]
[uncultured archaeon]
Length = 357
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 73/353 (20%), Positives = 148/353 (41%), Gaps = 36/353 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY----------LIFSGGKRLRPMLTLA 52
++ + + K+N + +E + Y GGKRLRP+ +
Sbjct: 4 DIDGVVAQYQAKINERLGWFFDEKIEEASKISDYTQEVVVNIKEYTLRGGKRLRPIFLIY 63
Query: 53 TALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG- 110
+ D + + +IE + + L+HDD++D+ LRRGK + + N + L G
Sbjct: 64 GYKCITEDNIDAIIEASISIELMQSYLLIHDDIMDEDELRRGKPTFHIEYENICATLFGD 123
Query: 111 --------------------DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
+ E AL+ + + + G++ +
Sbjct: 124 DDTRKFGENIAILAGDLLEAYGIDVLTNSRFKEEYITRALQKYAEIVKNVGYGQILDIMS 183
Query: 151 SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
K D+TE + L + K + L++ +++AG + + +YG+ LG+AFQ+ D
Sbjct: 184 EKKKDITEAEILRIHKLKTASYTIENPLQIGAILAGAVEADLAVMSNYGLPLGLAFQIQD 243
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+L G ++GK +G D + GK TL ++ A +++EK S + + +++ +
Sbjct: 244 DILGLFGTEEKIGKPVGSDIQEGKKTLLILHALSNCSEKEKGIITSALGNADVTMAEIDT 303
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
I+RE +L ++ ++A ++ + K+ L+++ DF R
Sbjct: 304 IREIVRETGSLDYSKRLVGEKIEEAIHAIERSNF-RAEAKEFLVKIADFVGVR 355
>gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 381
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 18/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + V+ + + S I + Y SG GK +RP L LA A
Sbjct: 49 ALLERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAA 108
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L
Sbjct: 109 RALGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAML 168
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A A + ++ + +VT ++ L + +KT
Sbjct: 169 ALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKT 228
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D
Sbjct: 229 GALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADL 288
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + + + +A + + A
Sbjct: 289 SAHKKSLPVVAALTSGTPA-AAELAALYRGPMNTAAEVGRAADAVDRAGGRDWAQVCAAD 347
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD S L+ + +F +R +
Sbjct: 348 RMARAFHHLSRAVPDPSAAGDLLALAEFVTRRTS 381
>gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 349
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 18/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + V+ + + S I + Y SG GK +RP L LA A
Sbjct: 17 ALLERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAA 76
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L
Sbjct: 77 RALGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAML 136
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A A + ++ + +VT ++ L + +KT
Sbjct: 137 ALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D
Sbjct: 197 GALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADL 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + + + +A + + A
Sbjct: 257 SAHKKSLPVVAALTSGTPA-AAELAALYRGPMNTAAEVGRAADAVDRAGGRDWAQVCAAD 315
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD S L+ + +F +R +
Sbjct: 316 RMARAFHHLSRAVPDPSAAGDLLALAEFVTRRTS 349
>gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
fischeri MJ11]
gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
fischeri MJ11]
Length = 298
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 124/323 (38%), Gaps = 53/323 (16%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+E++N + K I + + + +KY + GGKR RP L TA ML + + A AI
Sbjct: 17 IEQLNQWLEK-IEIQQQPLTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAAAI 75
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H+ +L+HDD+ +D+ LRRG + + T++L GD L + AF ++ + +
Sbjct: 76 ECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEATAILAGDALQTLAFEILANGQLSDD 135
Query: 130 LEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
E + + G+ L A++ A
Sbjct: 136 AETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKVDLTSLERIHANKTGALIKCAVQLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T P +
Sbjct: 196 ALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDIISDTETLGKPQGSDLELDKSTYPAL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L +++A Q A ++L
Sbjct: 256 L--------------------------------------GLEGAKHKAEQLYQTAIEALN 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+P + ++ + ++R N
Sbjct: 278 DIPYN--TDAMQAFAQYVIERKN 298
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 75/324 (23%), Positives = 128/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ E + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLEASRELAAQLRTEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 61/321 (19%), Positives = 107/321 (33%), Gaps = 52/321 (16%)
Query: 14 KVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V+ + + + + E + + ++Y + GGKR+RP L +A A + + ACA+
Sbjct: 18 QVDRELDRCLARNATSERLQETMRYSVLGGGKRVRPALCMAAARAMGSDESTALAPACAL 77
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVI 122
E IH +L+HDD+ + + LLS A +
Sbjct: 78 ELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQTLAFALLSDAPALSD 137
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS- 181
+ E G S ++ + + KT L A++ + +
Sbjct: 138 RQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHRHKTGALIEASVRLGAL 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
V L Y LG+AFQ+ DD+LD G+ +GK G D KPT P
Sbjct: 198 TSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKRQGSDAARAKPTYP---- 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + +A +L
Sbjct: 254 ------------------------------ALL----GIEGARQHLARLLDEALSALESF 279
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
DS +L + D+ + R +
Sbjct: 280 -DSEA-DTLRAMADYVVARSH 298
>gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
Length = 347
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 18/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + V+ + + S I + Y SG GK +RP L LA A
Sbjct: 15 ALLERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAA 74
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L
Sbjct: 75 RALGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAML 134
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A A + ++ + +VT ++ L + +KT
Sbjct: 135 ALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKT 194
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D
Sbjct: 195 GALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADL 254
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + + + +A + + A
Sbjct: 255 SAHKKSLPVVAALTSGTPA-AAELAALYRGPMNTAAEVGRAADAVDRAGGRDWAQVCAAD 313
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD S L+ + +F +R +
Sbjct: 314 RMARAFHHLSRAVPDPSAAGDLLALAEFVTRRTS 347
>gi|91228844|ref|ZP_01262750.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
gi|91187615|gb|EAS73941.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
Length = 128
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A + T
Sbjct: 1 MQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPENSIMI 60
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ I ++ L++ +M+E +L T +A KA L LP+S +K++L+ +
Sbjct: 61 REAIEKAN-GMDRLEEILAVMKEAGSLEYTTQKALEEADKAIAELSVLPESEYKQALVTL 119
Query: 314 VDFCLQRL 321
+QR
Sbjct: 120 AHVAVQRT 127
>gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
Length = 294
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 73/315 (23%), Positives = 120/315 (38%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LDQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----------IETKSQ 127
+HDD+ LRRG+ + + T++L GD L + AF ++ + +
Sbjct: 80 IHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLNPAAETQRINM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A S A + G+ L EE K A++ A +
Sbjct: 140 IKALAHSSGANGMCVGQALDLGAENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 296
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 70/325 (21%), Positives = 119/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V+ L+ +I + ++Y + GGKR+RP L A L + A
Sbjct: 12 QRVDALLQAQISDLDEHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGVSESDLDAPAL 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+H +DD LRRG + + ++L GD L + AF +V+
Sbjct: 72 AIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFDIVVNYPLS 131
Query: 128 EALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L + L + K A++ +A
Sbjct: 132 DFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQLHSKKTGALIIAAVK 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++L V + + L Y +G+AFQ+ DD+LD G+ +GK G D K T P
Sbjct: 192 MAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGDSKTLGKPQGSDQEQNKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + Q+A +
Sbjct: 252 ----------------------------------ALL----GLEGAQAYLAQLHQEALQA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP + + L DF + R +
Sbjct: 274 LTALPYN--TQVLKSFTDFVIHRNH 296
>gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 347
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 18/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + V+ + + S I V Y +G GK +RP L LA A
Sbjct: 15 ALLERTRAAVDPHLRSAVESLPGGIRRVAMYHFGWENADGTPAAGQAGKAIRPALVLAAA 74
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + V A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L
Sbjct: 75 SALGGDPERAVRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGIPDAIITGDAML 134
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A A + ++ + ++T ++ L + +KT
Sbjct: 135 ALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADCAFEERGPEEITLDECLTMATAKT 194
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D
Sbjct: 195 GALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADL 254
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + + + +A + + A
Sbjct: 255 AAHKKSLPVVAALTSGTPA-AAELAALYRGPMATAGEVSRAADAVDRAGGRDWAQVSAAD 313
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD S L+ + +F +R +
Sbjct: 314 RMARAVHHLSRAVPDPSAAGDLLALAEFVTRRTS 347
>gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
Length = 295
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 120/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + ++Y + +GGKR+RP+L A L+ AC
Sbjct: 11 ARVDGALDALFVAPREELHRLYQAMRYSVMNGGKRVRPLLAYAACEALQGEAQRADAAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++L D L + AF ++ + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADGRRN 130
Query: 128 EALEALSLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L T + L + A++ ++
Sbjct: 131 PQEPTVCLEMLTHLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P
Sbjct: 191 LGALASGRAEAATLAALERYAQAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYALELRDQALAA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S+ L ++ + ++R N
Sbjct: 273 LEGFPASA--DPLRQLARYIVERRN 295
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 72/323 (22%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ +V + + ++ + + V+Y + GGKR+RP+L A + R + A
Sbjct: 11 LGRVEAALEHYLPAETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------C 119
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVL 130
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + E+ A+L +A
Sbjct: 131 APAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114]
gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114]
Length = 301
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 71/342 (20%), Positives = 128/342 (37%), Gaps = 61/342 (17%)
Query: 1 MKMLEDLTLKDM--------EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M + D + + E++N + K I + + + +KY + GGKR RP L
Sbjct: 1 MDKMTDSLKQQLTFFQNRNIEQLNQWLEK-IEIQQQPLTEAMKYSLLLGGKRARPYLVYI 59
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVG 110
TA ML + + A AIE +H+ +L+HDD+ +D+ LRRG + + T++L G
Sbjct: 60 TAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEATAILAG 119
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEED 160
D L + AF ++ + + E + + G+ L
Sbjct: 120 DALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKVDLASL 179
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
A++ A + ++ L+ Y +G+AFQ+ DD+LD +
Sbjct: 180 ERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEIYADAIGLAFQVQDDILDIISDTET 239
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G D K T P +L L
Sbjct: 240 LGKPQGSDLELDKSTYPALL--------------------------------------GL 261
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+++A Q A ++L +P + ++ + ++R N
Sbjct: 262 EGAKHKAEQLYQTAIEALNDIPYN--TDAMQAFAQYVIERKN 301
>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
Length = 294
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAETVVPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LAPAQQAALVRELALASGSIGMAGGQAIDLASVGMKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSADAMAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A A +L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 QPF--GARAQRLAELADLVVNRVS 294
>gi|149723076|ref|XP_001504011.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2
[Equus caballus]
Length = 400
Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/347 (14%), Positives = 118/347 (34%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVYDSRHNLQ-----LRGLVVLLISKA 122
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSMKASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + D
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENYITDD 242
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 243 IGISTWKEQTFLSHGALLAKSCQAAMELAKHGAEVQDMAFQYGKHMAMSHKINSDLQPFI 302
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + V+ G G++ + K ++
Sbjct: 303 KEKTSDSTTFHLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRETIK 354
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 400
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
Length = 294
Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + +D + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPADNVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
Length = 300
Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 125/332 (37%), Gaps = 53/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ + + V I + + + + ++Y +GGKRLRP L + ++ +
Sbjct: 7 SDLKSAMAEIAQAVELKIGALLPTTDLPEARVFEAMRYGCLNGGKRLRPFLVMQSSALFG 66
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D + A A+E +H+ +L+HDD+ LRRG+ + T++L GD LL+
Sbjct: 67 VNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGELRRGRPTCHRQFDEATAILAGDGLLTL 126
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ + + E + G ++++ + + K
Sbjct: 127 AFEVLADPATHEDPNIRCQLVTALAKAAGGHGMVGGQMLDLIAEHETFDLGTTTRLQRLK 186
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + + + E ++ R AL++Y +LG+AFQ+VDD+LD G E GK +G D
Sbjct: 187 TGEMIAFSCEAGGILGKASPPQRTALRAYAHDLGLAFQIVDDLLDVEGTAEETGKTVGRD 246
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ GK T IL +A
Sbjct: 247 AQAGKATFVSIL--------------------------------------GRDRARAQAE 268
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A L D L V DF + R
Sbjct: 269 MLADQAAQHLDIF-DGRA-DMLKAVADFVVAR 298
>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
Length = 294
Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 72/324 (22%), Positives = 128/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ +V + + ++ + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LARVEDALGHYLPAETVVPGKLHEAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIQYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A++ +LV +A G+ L+ + E+ K A+L +A
Sbjct: 131 LTAVQQAALVRELALASGSVGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + +AL Y +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 191 GALAGETPSDDTMRALDVYADAIGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A +L
Sbjct: 249 --------------------------------VSII----GLDASRELAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 QPF--GARAQRLAELADLVVNRVS 294
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 55/328 (16%)
Query: 9 LKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + + + + + + + ++Y + GGKRLRP+L A A + + +
Sbjct: 38 QERLVRTEEALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRA 97
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
CA+E IH +L+HDD +D+ +RRGK + +G +++L GD L + AF +++
Sbjct: 98 GCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPED 157
Query: 126 SQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +A G+ L+ + A+L +
Sbjct: 158 DGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMHRLKTGALLLGSV 217
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L ++ A AL YG LG+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 218 LMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTF 277
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L L A +A
Sbjct: 278 VSLL--------------------------------------GLEAARAHAEELRLQAHA 299
Query: 297 SL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+L L D+ ++L + D +QR +
Sbjct: 300 ALTRSGLADT---QALAALADMVVQRTH 324
>gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 345
Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 15/294 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GK +RP L L + LA I+ +H +L+HDD+ DDSA+RRG+ +
Sbjct: 53 PGKLIRPQLVLLACAAAGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSAMRRGRRTLWHI 112
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEAL--------EALSLVACTLAEGELRQLSLSK 152
WG + GD + A + + + + EG+ LS
Sbjct: 113 WGLAHGINAGDAMFVIAHLAIHRLSERGLPAERVLSILRRFDEIILRICEGQYLDLSFEG 172
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+L +T DYL +I KTA L + A E+ + AG AL +G +G+AFQ+ DD+L
Sbjct: 173 DLSITPADYLTMIGGKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDDIL 232
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
G + GK D K +LPV+ A +R + + +A
Sbjct: 233 GIWGAPEQTGKPFAADLYRRKVSLPVVHALTHSPER--ERLADLYRQPTLDEAAVMQAMA 290
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPD-----SSWKKSLMEVVDFCLQRL 321
I+ + A + Q A +L L ++ + L + + R
Sbjct: 291 ILDAAGSRAFCAAMANEHHQDAFKALDRLNPATAAAAAARNQLRSLTQRLIGRQ 344
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 49/299 (16%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V + + + E + + ++Y + +GGKRLRP+L LA + + A A+
Sbjct: 26 ASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACELAGGEPAEALPTAVAL 85
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD LL+++F MV
Sbjct: 86 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSPGVP 145
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSS 181
E L V L+ + + E + + KT L SA + +
Sbjct: 146 PERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTGALLSACVICGA 205
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
LI G ++ + AL+ Y +G+AFQ++DD+LD + +GK G+D K T P +L
Sbjct: 206 LIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLL- 264
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L ++ RA +AK +L
Sbjct: 265 -------------------------------------GLDESRRRAELLVSEAKAALEP 286
>gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703]
gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703]
Length = 298
Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L+ + S+ + + ++Y+ GGKRLRP+L LA + + E
Sbjct: 5 NELKTWQQKAQAQTELLLAHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGE 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ AIE +H +L+HDD+ LRRGK + + T++LVGD L +Q
Sbjct: 65 ANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQ 124
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ A L++++ +A G+ L+ E
Sbjct: 125 AFDVLSRPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKT 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + Q L Y LG+AFQ++DDVLD + +GK G+D
Sbjct: 185 GALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADTATLGKTAGKD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT ++ L A
Sbjct: 245 SDNDKPTYVKLM--------------------------------------GLQAARTYAE 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + D + + L ++ F R N
Sbjct: 267 TLIAEAVALIEPFGDKALR--LRQLAKFVTARKN 298
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
Length = 294
Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 73/306 (23%), Positives = 121/306 (39%), Gaps = 50/306 (16%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
D + + D + Y + +GGKR+RP++ AT L A A+E IH +L+HDD+
Sbjct: 28 DAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYSLVHDDLP 87
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
LRRG+ + + T++L GD L +QAF ++++ A + + TLA
Sbjct: 88 AMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRMVQTLAHA 147
Query: 144 ELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
V E ++ KT L A++++ L A L
Sbjct: 148 SGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASEQQLSYLS 207
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
Y +G+AFQ+ DD+LD + +GK G D KPT +L
Sbjct: 208 VYAQAIGLAFQVQDDILDVISDTRTLGKPQGSDESRNKPTYVSLL--------------- 252
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
L + +A Q+A+D+LR L + L ++
Sbjct: 253 -----------------------GLDGAKRKAQDLHQQARDALRKLD--ADTSPLEDIAR 287
Query: 316 FCLQRL 321
+ ++R
Sbjct: 288 YIIERT 293
>gi|72161455|ref|YP_289112.1| polyprenyl synthase / dimethylallyltranstransferase [Thermobifida
fusca YX]
gi|71915187|gb|AAZ55089.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Thermobifida fusca YX]
Length = 356
Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 70/342 (20%), Positives = 119/342 (34%), Gaps = 35/342 (10%)
Query: 15 VNFLILKRICSDVEMIPD---------VVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNH 64
V+ + + S ++ + + SGGKRLRP
Sbjct: 16 VDAELAAFVASRRPLLLEIGAEWEPVLAALEAMISGGKRLRPAFCYWGWRGAGGGEEPGL 75
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----------LVWGNQTSVLVGDFL 113
A A+E + L+HDDV+D+S RRG+ A L
Sbjct: 76 YTAAAALELLQACALIHDDVIDNSDTRRGQPAVHRRLAALHRESGWHGDPDEFGRGAAIL 135
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
L E Q + +A +L + + + + + A L
Sbjct: 136 LGDLCLAWCEDMYQSSALPAEALAAGRGPFDLMRTEVVAGQYLDLVEQARGADTVEAALR 195
Query: 174 SAALEVSSLIAGVQNSVR-----------QALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + + A +YG+ LGIAFQL DDVL G+ E G
Sbjct: 196 VMRFKSAKYTIEQPLHLGAALAGRYAELAPAYTAYGIPLGIAFQLRDDVLGVFGDPEETG 255
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D R GK T+ V +R + ++ + D ++ E + ++ ++ AL
Sbjct: 256 KPAGDDLREGKRTVLVAETLRRAAADDAEQFRRLLGDPELGAEEIAWMRSVIVDSGALEA 315
Query: 283 TEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
E R Y A +L + D + +L +++ R +
Sbjct: 316 CEARIADYVADATQALENDVIAD-DARSALADLIVAATARKH 356
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 122/321 (38%), Gaps = 54/321 (16%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ I + + + +++ +F+GGKRLRP+L + +A + D+ + +A A+E
Sbjct: 28 AAMEKRIARY--PEESRVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALE 85
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--- 127
FIHT +L+H +DD RRG + T++L GD LL+ AF ++
Sbjct: 86 FIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLL 145
Query: 128 -------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
C ++ +T E+ + +KT + ++
Sbjct: 146 PAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREELEDIHNNKTGAMIEVSVFSG 205
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + G AL Y N+G+AFQ++DD+L+ G+ MGK +G D GK T P ++
Sbjct: 206 AYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGDPKVMGKAVGTDAELGKSTYPALM 265
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + A KA ++
Sbjct: 266 --------------------------------------GLDGAQDFAERLINKALQAIVS 287
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
D+ L + + L R
Sbjct: 288 F-DNKC-DPLRSIATYILTRS 306
>gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
Length = 294
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/315 (21%), Positives = 115/315 (36%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+ + + + + ++Y + GGKR RP L T ML + A A+E IH +L
Sbjct: 20 LQALPHQNQPLIEAMRYGLLLGGKRARPFLVYITGQMLGCDKSDLDTPASAVECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD+ LRRG+ + + T++L GD L + AF ++ + E +
Sbjct: 80 IHDDLPAMDDDELRRGQTTCHIKFDEATAILTGDALQTLAFTILADGDLHPNAEVNRIKM 139
Query: 138 ----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ G+ L+ EE A++ SA +
Sbjct: 140 IKVLADASGANGMCLGQALDLAAENRSVSLEELEEIHRNKTGALMKSAIRLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 200 LEVMPQLDKYADAVGLAFQVQDDILDIVSDTETLGKPQGSDQELNKSTYP---------- 249
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ L +A++ +A +L +P +
Sbjct: 250 ------------------------ALL----GLDGAINKAHTLLNEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 ELLEEFARYVIERKN 294
>gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3]
Length = 302
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 45/303 (14%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH-- 81
+ + + D Y + +GGKR+RP+L + ++ V A A+E IHT +L+H
Sbjct: 41 GAKYKALYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDD 100
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACT 139
+DD +RRG+ + G ++L GD L + A + ++ +++ + +
Sbjct: 101 LPCMDDDDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSNLSAEKKTAMIKELYDR 160
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
Q + T + L + + KT+ L +AA + + AG A ++Y
Sbjct: 161 TLGMIEGQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAH 220
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++G+AFQ+VDD+LD V E+GK IG D + K T +L
Sbjct: 221 DVGLAFQIVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLL------------------- 261
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ A Y + A+ +L ++ + L + D L
Sbjct: 262 -------------------GIDKARELAKQYTEGAEKALSAFENNEF---LCRLTDLLLN 299
Query: 320 RLN 322
R N
Sbjct: 300 RKN 302
>gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a]
Length = 302
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 45/297 (15%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ D Y + +GGKR+RP+L + ++ V A A+E IHT +L+H +DD
Sbjct: 47 LYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDD 106
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCMVIETKSQEALEALSLVACTLAEGEL 145
+RRG+ + G ++L GD L + A + + +++ + +
Sbjct: 107 DDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSDLPAEKKTAMIKELYDRTLGMIE 166
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
Q + T + L + + KT+ L +AA + + AG A ++Y ++G+AF
Sbjct: 167 GQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAF 226
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+VDD+LD V E+GK IG D + K T +L
Sbjct: 227 QIVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLL------------------------- 261
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L A Y + A+++L ++ + L + D L R N
Sbjct: 262 -------------GLDKARELAKKYTEGAENALSAFENNEF---LCRLTDLLLNRKN 302
>gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B]
gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B]
Length = 294
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LDQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVIETKSQEA 129
+HDD+ LRRG+ + + T++L GD L + AF E +
Sbjct: 80 IHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLSPAAEAQRINM 139
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF--SAALEVSSLIAGVQ 187
++AL+ + + L L + + I K A +
Sbjct: 140 IKALAHSSGASGMCVGQALDLGAENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 129/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E V+ + + + I + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +DD+ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVACT------------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + T + DV E + KTA L AA
Sbjct: 195 APERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++I G Q L+ YG +G+ FQ+VDD++D E+GK G+D K T P
Sbjct: 255 VLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A ++A +
Sbjct: 315 RLI--------------------------------------GLERSREVAEKLRREAAEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L+ + + R N
Sbjct: 337 LLGFDSNKV-APLVALASYIACRHN 360
>gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 74/319 (23%), Positives = 127/319 (39%), Gaps = 14/319 (4%)
Query: 16 NFLILKRICSDVEMIPDVVKYLI----------FSG-GKRLRPMLTLATALMLEYRGDNH 64
+ + I + V Y + G GK +RP L L + +
Sbjct: 25 DPALRAAIDTLPATARRVAGYHLGWWDEDGRPAEGGAGKAIRPALALLASEAVGGSATAA 84
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---V 121
V A A+E +H +LLHDDV+D RR + A V+G +VLVGD LLS A +
Sbjct: 85 VPAAVAVELVHNFSLLHDDVMDGDRTRRHRPTAWTVFGIGNAVLVGDVLLSLACDVLAAS 144
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +A+ L+ L G+ ++ V ++ + + ++KT L AA + +
Sbjct: 145 EHPSATKAIRLLTDAVQRLVAGQFVDIAFQDRRAVQLDECVSMAENKTGALLGAACALGT 204
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +++G +G+AFQ VDD+L G+ GK+ D R K +LPV+ A
Sbjct: 205 IFGDGTAQQVDHQRAFGEGVGLAFQHVDDLLGIWGDPARTGKSAFSDLRTRKKSLPVVAA 264
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ D + E L + ++ ++ +A ++ + LR
Sbjct: 265 LTADNPAGRELADLYYRDEALEEEELLQVAALVEAAGGRAWSQDQADDLLARSMEHLRLA 324
Query: 302 PDSSWKKSLMEVVDFCLQR 320
L + F R
Sbjct: 325 QPVKRADELSTLARFVTHR 343
>gi|62079229|ref|NP_001014271.1| decaprenyl-diphosphate synthase subunit 2 [Rattus norvegicus]
gi|73620007|sp|Q5U2R1|DLP1_RAT RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
2; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 2
gi|55250165|gb|AAH85898.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Rattus
norvegicus]
Length = 401
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNVAMQVRKLVGTQHPLLTTARGFVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMK 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS-----LSKNLD 155
+GN+ +VL GDFLL+ A + ++ + +E L+ L +G ++ S D
Sbjct: 184 FGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFI 303
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K + V+ G G+++ L++ ++
Sbjct: 304 KDKASDSKTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRLNYTKLRET---IK 355
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 356 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 401
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 133/332 (40%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+ + +V + + D +I + ++Y + + GKRLRP+L LA+ +
Sbjct: 10 DLKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGTA 69
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E +HT +L+HDD+ RRG+ V+G ++L GD LL+ AF
Sbjct: 70 AIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFE 129
Query: 120 MVIETKSQEALEALSLVACTLAEG---------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + + V LA ++ L DV E ++ KT
Sbjct: 130 AIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTG 189
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++AG +++ L++Y +G+AFQ++DD+LD E+GK G+D
Sbjct: 190 ALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDLA 249
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + A
Sbjct: 250 AKKATYPSLL--------------------------------------GLDASREYADQL 271
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK ++ + L + D+ R +
Sbjct: 272 ITEAKAAIAA--FGAEADPLRAIADYITARKH 301
>gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
NRL30031/H210]
gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
NRL30031/H210]
Length = 298
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 130/334 (38%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L++ + S+ + + ++Y+ GGKRLRP+L LA + + E
Sbjct: 5 NELKTWQQKAQAQTELLLVHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGE 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ AIE +H +L+HDD+ LRRGK + + T++LVGD L +Q
Sbjct: 65 ANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQ 124
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ A L++++ +A G+ L+ E
Sbjct: 125 AFDVLSRPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKT 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + Q L Y LG+AFQ++DDVLD + +GK G+D
Sbjct: 185 GALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADTATLGKTAGKD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT ++ L A
Sbjct: 245 SDNDKPTYVKLM--------------------------------------GLHAARTYAE 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + D + + L ++ +F R N
Sbjct: 267 TLITEAVALIEPFGDKALR--LRQLAEFVTARKN 298
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML++ + + + + + I +++ +F+GGKRLRP+L + A M+
Sbjct: 23 MLKETLEQGRILADAALERLLPPGTQRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITG 82
Query: 60 R-GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D L A+E +HT +L+HDD+ D+ LRRG+ + +G T++L GD L +
Sbjct: 83 SLPDGVDELGAALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTY 142
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKT 169
A+ ++ ++ + A G + + + LD+ E ++ +SKT
Sbjct: 143 AYEVMARLRTTAEARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKT 202
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L +A++ L AG + Q ++ +G + G+AFQ+VDDVLD ++GK G+D
Sbjct: 203 GALITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDT 262
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
++ K T P + + + A
Sbjct: 263 KSEKSTWPSLY--------------------------------------GVDKSLEMADE 284
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A L +L E+ F ++R
Sbjct: 285 LVYTANKRLDSF--GERATTLKELAKFLVERK 314
>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
Length = 294
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ + L+ E+V ++ + ++ + I + + Y + +GGKRLRP+L +
Sbjct: 1 MMNEQLLQSTEEVEQVVYSYLPAEEGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G AIE IHT++L+HDD +D+ RRGK +V+G +VL GD LL A
Sbjct: 61 TGIEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---------K 168
+ + + V E +I K
Sbjct: 121 IETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L AA+ + +++AG + + ++ +G+AFQ+ DD+LD +GK + D
Sbjct: 181 TGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T + +
Sbjct: 241 EKNNKTTYV--------------------------------------SLEGIEKAKRDVE 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A D L LP S+ L +++ + R
Sbjct: 263 KLSETAVDILYSLPGSN--DFLEDLIKVLVSR 292
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + ++ + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A L + G+ L A++ ++
Sbjct: 132 RNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLDAAKGYALELRDQALAAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
++ + L E+ + ++R +
Sbjct: 274 SLFDTTA--EPLRELARYIVERRH 295
>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
Length = 296
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 72/323 (22%), Positives = 124/323 (38%), Gaps = 55/323 (17%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
EK+ ++ K + I + ++Y + +GGKRLRPML + + G
Sbjct: 12 EKIEKILKKYLPEKKGYQRTIMEAMEYSLMAGGKRLRPMLMWESYRLFGGEGAAIEPFMA 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF +
Sbjct: 72 AIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACRAFEE 131
Query: 128 EALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAAL 177
E+ AL + + + + ++ + L I KT+ L A++
Sbjct: 132 ESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGEVLDFIYRLKTSALIEASM 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+++AG + ++ +G+AFQ+ DD+LD +GK + D +N K T
Sbjct: 192 MAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDVTSTTELLGKPVHSDEKNEKTTYV 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + Q+A D
Sbjct: 252 TW--------------------------------------KGIEKAHEDVERLTQEAVDL 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
LR P L E++ + R
Sbjct: 274 LRKFPAKD--DFLEELLKSLVYR 294
>gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
4304]
gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
4304]
Length = 292
Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 40/306 (13%)
Query: 15 VNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ K + S I + Y I +GGKR RP++ L +A + + + LA ++E
Sbjct: 11 FEDSLKKFVESVEATPKIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLALSVE 70
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L+HDDV+D + RR + A + ++++GD+L+S++ + + + +
Sbjct: 71 LIHTASLVHDDVIDKAEKRRKREALHKKYDISLAIVLGDWLISKSVELTSKYGEEIIRDF 130
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
++ L S+ +N TE+DY I+ KTA LF+ + + + I
Sbjct: 131 SNVGMMMSEGEVLDIYSIKENF--TEKDYFECIEKKTAALFAYSAKSACKIVCEDRIAAD 188
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L YG+NLGIA+Q+VDD+L+Y +++ TLP I + G +
Sbjct: 189 KLFDYGLNLGIAYQIVDDLLEYLRLLDDKHSVFESR------TLPQIYEEKYGKEE---- 238
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + ++ +++ SL +S K+ L +
Sbjct: 239 --------------------------GVNKVMEKISTFVERSLSSLEYFDESPEKEKLRK 272
Query: 313 VVDFCL 318
+VDF
Sbjct: 273 IVDFMT 278
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 52/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++L V + + +D + + + Y + +GGKRLRP+L +A A +
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGGKRLRPILLMAAADAVGV 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G + ACA+E IHT +L+HDD+ +D+ RRGK+ V+ T++L GD LL+ A
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILAGDALLTLA 123
Query: 118 FCMVIETKSQE-------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F +++ + E G ++N ++ E+ V KT
Sbjct: 124 FTVILRQQDVPAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AAL +++AG AL +Y + G+AFQ+ DD+LD G ++GK +G D +
Sbjct: 184 ALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDEK 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T + +L + + A
Sbjct: 244 NHKSTYVTLT--------------------------------------SLDEAQSLARQT 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A D+L D + L E+V + ++R
Sbjct: 266 VESAADALHIFGDEAA--FLRELVLYLVRRK 294
>gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 295
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 117/324 (36%), Gaps = 55/324 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + ++ + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A L + G+ L A++ ++
Sbjct: 132 RDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLDAAKGYALELRDQALAAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
++ + L E+ + ++R +
Sbjct: 274 SLFDTTA--EPLRELARYIVERRH 295
>gi|264681462|ref|NP_001161125.1| decaprenyl-diphosphate synthase subunit 2 [Sus scrofa]
gi|262204918|dbj|BAI48039.1| prenyl (decaprenyl) diphosphate synthase subunit 2 [Sus scrofa]
Length = 394
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/347 (15%), Positives = 120/347 (34%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 62 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSQHNLQ-----LRGLVVLLISKA 116
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ + L+ +
Sbjct: 117 AGPSSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 176
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + D
Sbjct: 177 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENRITDD 236
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 237 IGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLQPFI 296
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + V+ G + GK+ + K ++
Sbjct: 297 KEKTSDSLTFNLNSA-----PVVLHQEFLGRDLWIKQIRKAQEKGKL---DYAKLRETIK 348
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 349 AGKGVTSAIDLCRYHGNKALEALESFPPSEARTALENIV-FAVTRFS 394
>gi|269973903|ref|NP_082048.2| decaprenyl-diphosphate synthase subunit 2 isoform 1 [Mus musculus]
gi|85718630|sp|Q33DR3|DLP1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
2; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 2; AltName: Full=Solanesyl-diphosphate synthase
subunit 2
gi|187955412|gb|AAI47694.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus]
gi|187955734|gb|AAI47695.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus]
Length = 401
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/347 (16%), Positives = 123/347 (35%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E LS L G ++ S D
Sbjct: 184 FGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFI 303
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K + V+ G G ++ L++ ++
Sbjct: 304 KDKASDSKTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRET---IK 355
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 356 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 401
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 58/327 (17%)
Query: 12 MEKV----NFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
ME + + + + + ++Y + GGKR+RP+L A ++ +
Sbjct: 10 MEAIQRRSETALENLLPDANIAPARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERL 69
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ACA+E IH +L+HDD +D+ LRRGK + + + T++LVGD L + AF +
Sbjct: 70 DKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLS 129
Query: 123 ETK---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
E S A + + +A G+ L+ EE I A++
Sbjct: 130 EHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIR 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ L ++ A + + + L YG +G+ FQ+VDD+LD + + +GK G+D N K
Sbjct: 190 ASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNK 249
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT +L + + A S
Sbjct: 250 PTYVTLL--------------------------------------GMTEARALAESLLAD 271
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A+++L + + L E+ F + R
Sbjct: 272 AREALTPFGPQAAR--LDELATFIVHR 296
>gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
Length = 294
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LDQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVIETKSQEA 129
+HDD+ LRRG+ + + T++L GD L + AF E +
Sbjct: 80 IHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLSPAAEAQRINM 139
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF--SAALEVSSLIAGVQ 187
++AL+ + + L L + + I K A +
Sbjct: 140 IKALAHSSGASGMCIGQALDLGAENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 127/325 (39%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + I + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + V E + KTA L AA
Sbjct: 195 APEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P
Sbjct: 255 VLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A ++A++
Sbjct: 315 RLI--------------------------------------GLEGSREVAEKLRREAEEQ 336
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L S L+ + + R N
Sbjct: 337 LLGFDPSKA-APLVALASYIACRHN 360
>gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
Length = 305
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/326 (21%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN +L + + + ++Y GGKRLRP LT A M +N A
Sbjct: 18 DRVNQYLLDALNALPFANLPLAQAMRYGTLLGGKRLRPFLTYAIGSMFGVSQENLDAPAA 77
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + +G +VL GD L + AF ++
Sbjct: 78 AVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKYGEGNAVLAGDALQTLAFQLLSSAPMP 137
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + + G+ L E A++ +A
Sbjct: 138 DVTDKDRIAMIAELSYASGLAGMCGGQALDLDAEGKQVDLESLERIHQHKTGALIRAAIR 197
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L Y ++G+AFQ+ DD+LD G+ GK G D + K T P
Sbjct: 198 LGAFAAGEKGQQLLPVLDKYAQSIGLAFQVQDDILDVIGDSEVTGKRQGTDAEHEKSTYP 257
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + +A A D+
Sbjct: 258 SLL--------------------------------------GLEAAQKKARELYHDAIDA 279
Query: 298 LRCLPDSSWK-KSLMEVVDFCLQRLN 322
L L + + L + +F ++R +
Sbjct: 280 LETLQSHGYNIEMLSALANFIIERKS 305
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 126/333 (37%), Gaps = 54/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++V + + + + ++Y + +GGKRLRP+LT+A + +
Sbjct: 4 EFQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELFGLE 63
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACA+E IHT +L+H +DD LRRG+ V+G +VL GD LL+QAF
Sbjct: 64 AADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLTQAF 123
Query: 119 CMVIETKSQEA----------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ E + E G + + E + K
Sbjct: 124 ALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIHSLK 183
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T LF AA+ + ++AG L Y + G+AFQ+ DDVLD G+ GK +G D
Sbjct: 184 TGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGVGRD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
R K T + + RAY
Sbjct: 244 ARLDKSTYVTLH--------------------------------------GVEGARERAY 265
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A + L + W L + + + R+
Sbjct: 266 QAVRLALEELEPFGGAGW--VLRALAESVVDRV 296
>gi|81157935|dbj|BAE48218.1| subunit 2 of solanesyl diphosphate synthase [Mus musculus]
Length = 401
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/347 (16%), Positives = 123/347 (35%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNASCQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E LS L G ++ S D
Sbjct: 184 FGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFI 303
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K + V+ G G ++ L++ ++
Sbjct: 304 KDKASDSKTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRET---IK 355
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 356 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 401
>gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
Length = 297
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/328 (21%), Positives = 126/328 (38%), Gaps = 56/328 (17%)
Query: 10 KDMEKVNFLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
M V + + + S + + + ++Y + GGKR+RP+L AT + +
Sbjct: 9 DWMRNVQSTMEESLSSLLPEGKLASSSLHESMRYAVLDGGKRIRPLLVFATGYLFDAEKL 68
Query: 63 NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A A+E IH +L+HDD +D+ LRRGK + +G T++L GD L +QAF +
Sbjct: 69 ALARAAAAVEMIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGEATALLAGDALQAQAFVV 128
Query: 121 VIETKSQEALEALSLV-------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + L + A + G+ L+ E A+L
Sbjct: 129 LSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQAIDLASVGKSLTVNELENMHRLKTGALLT 188
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ + + AL +Y +G+AFQ+VDD+LD + ++GK G+D + K
Sbjct: 189 ASVFLGAYCSKIPTEQEKNALNAYAKAIGLAFQVVDDILDVTADSADLGKTAGKDSADNK 248
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT +L L ++ A
Sbjct: 249 PTYVSLL--------------------------------------GLEESRQLAEKLRND 270
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +L + + L ++ D ++R
Sbjct: 271 AYAALSIFDEKA--DYLRQLADLVVRRK 296
>gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
Length = 305
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 73/326 (22%), Positives = 116/326 (35%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN +L + + + +KY GGKRLRP LT A ML DN A
Sbjct: 18 DRVNQYLLNSLETLPFADLPLAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSQDNLDAPAA 77
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
A+E IH +L+H +DD LRRG+ + +G +VL GD L + AF
Sbjct: 78 AVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSAAMP 137
Query: 120 --MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + A + + G+ L A++ +A
Sbjct: 138 EVSDKDRIAMISELAYASGLAGMCGGQALDLDAEGKRVDLAALERIHQHKTGALIRAAIR 197
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L Y +G+AFQ+ DD+LD G+ GK G D ++ K T P
Sbjct: 198 LGAYAAGEKGRQSIAILDQYANAIGLAFQVQDDILDVIGDSEITGKRQGADEQHEKSTYP 257
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + +A Q A +
Sbjct: 258 SLL--------------------------------------GLEAAQEKAKELYQDAITA 279
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQRLN 322
L L + L + +F ++R +
Sbjct: 280 LELLQSQGYNTELLRALANFIIERKS 305
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/325 (19%), Positives = 114/325 (35%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++E + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDAALEPLFIAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------- 118
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLS 130
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + + G+ L + A++ ++
Sbjct: 131 PQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYAIELRDQALVA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + + ++R +
Sbjct: 273 LEGF--GEDAEPLRALARYIVERRH 295
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 55/326 (16%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + I + ++Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 93 ESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAV 152
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+ LRRGK V+G +VL GD LLS AF + S +
Sbjct: 153 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDV 212
Query: 130 LEALSLVACTLA-------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + +V + DV E + KTA L A+
Sbjct: 213 VSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEAS 272
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T
Sbjct: 273 AVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTY 332
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P I+ L + A ++A+D
Sbjct: 333 PKIM--------------------------------------GLEKSREFADKLNREARD 354
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L DS+ L+ + ++ R N
Sbjct: 355 QLLGF-DSAKAAPLLALANYIAYRQN 379
>gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 347
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 18/334 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + V+ + + S I V Y +G GK +RP L LA A
Sbjct: 15 ALLERTRAAVDPHLRTAVESLPGGIRRVAMYHFGWENADGTPAAGQAGKAIRPALVLAAA 74
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + V A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L
Sbjct: 75 SALGGDPERAVRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGIPDAIITGDAML 134
Query: 115 SQAFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A A + ++ + +VT ++ L + +KT
Sbjct: 135 ALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADCAFEERGPEEVTLDECLTMATAKT 194
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D
Sbjct: 195 GALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADL 254
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K +LPV+ A GT + + + +A + + A
Sbjct: 255 AAHKKSLPVVAALTSGTPA-AAELAALYRGPMATAGEVSRAADAVDRAGGRDWAQVSAAD 313
Query: 290 YGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
+A L +PD S L+ + +F +R +
Sbjct: 314 RMARAVHHLSRAVPDPSAAGDLLALAEFVTRRTS 347
>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 300
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 75/331 (22%), Positives = 127/331 (38%), Gaps = 52/331 (15%)
Query: 5 EDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + + + + + I + + + Y + +GGKRLR +L +++A + +
Sbjct: 9 QSILKQRVTLIEDFLKTCIQENNISSTLQHAMNYSLLAGGKRLRAVLCISSAALFDLSPT 68
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A IE IHT +L+HDD+ RRGK + + ++L GD LL+ AF
Sbjct: 69 SILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHKAFNEALAILAGDALLTDAFTF 128
Query: 121 VIETKSQ---------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ S A + + + +G+ + + DV+ + + KT
Sbjct: 129 MSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEHTGVSDVSFNTLCIIHEYKTGA 188
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
LF A+ +++AG S ALK YG LG AFQ+ DD+L+ + +GK D
Sbjct: 189 LFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDDILNVTADSITLGKPTRSDQEK 248
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T P +L L ++ A
Sbjct: 249 GKITYPSLL--------------------------------------GLEKSKKLAEEKI 270
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A SL L EV + L R +
Sbjct: 271 HLAISSLDTF-TGDEVLFLKEVANSLLTRTH 300
>gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
Length = 294
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 73/322 (22%), Positives = 120/322 (37%), Gaps = 55/322 (17%)
Query: 14 KVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + + + D ++Y GGKR+RP L AT ML + D+ LA A
Sbjct: 11 RVNAALERIFDDLPVTDPRLLDAMRYGTLLGGKRVRPFLVYATGTMLGAKEDDLDSLAAA 70
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC--------- 119
+E IH +L+HDD+ LRRG+ + + T++L GD L A+
Sbjct: 71 VECIHAYSLIHDDLPAMDDDHLRRGQPTVHIAFDEATAILAGDALQGLAYELLAEAPLPA 130
Query: 120 -MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + A + + G+ L+ + + A++ SA
Sbjct: 131 ALEGNRIAMLRSLARASGYQGMCGGQAIDLASTGKRIELDALQQLHRLKTGALIRSAVEM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
S +A + R AL Y +G+AFQ+ DD+LD + ++GK G D K T P
Sbjct: 191 GSYGVADLATEHRDALLRYAEAIGLAFQVQDDILDITADTEQLGKPQGSDQAADKSTFP- 249
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L A S Q A +L
Sbjct: 250 ---------------------------------ALL----GLDGARDAAQSLYQDALTAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP + + L + ++R
Sbjct: 273 AELPYN--TEHLQAFARYIVER 292
>gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
Length = 296
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/335 (20%), Positives = 121/335 (36%), Gaps = 54/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + +++ + + + + + ++Y + GGKR+R +L A +
Sbjct: 1 MTDFQSWARHTQQRMEHTLDNLLPASYIAPTRLHEAMRYAVLGGGKRVRALLAHAAGELC 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A A+E IH +L+H +DD LRRGK + + + T++LVGD L +
Sbjct: 61 GAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF + + +A G+ L E I
Sbjct: 121 LAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSELEYMHIH 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ +AAL + + A+ Y +G+AFQ+VDD+LD + +GK G
Sbjct: 181 KTGALIRAAALLGAHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEADSETLGKTAG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D ++ KPT IL + +
Sbjct: 241 KDAQSDKPTYVTIL--------------------------------------GIDHAKQL 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A A L +++ + L +V F QR
Sbjct: 263 AKELLDGALAQLAPFGEAAHR--LEQVAHFITQRS 295
>gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567]
gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567]
Length = 380
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/344 (20%), Positives = 129/344 (37%), Gaps = 40/344 (11%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-------GDNHVLLAC 69
+L I D + + ++ + SGGKRLR +L+ +
Sbjct: 37 RTLLTAISHDALPLLEAIE-SLSSGGKRLRALLSYWGWRGAGGESILERSAPTPIIRAGA 95
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVGDFL 113
A+E +A L+HDD++D S RRGK + + Q ++ GD
Sbjct: 96 ALELFQSAALIHDDIIDRSDTRRGKPSVHKKFETQHIQNSWVGDTFNYGLTGGIIAGDLC 155
Query: 114 LSQAFCMVI---------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
LS + M + V L ++ ++ + V
Sbjct: 156 LSWSEQMFSSIGEGALSGTEARNIFDTMRTEVMAGQYLDVLSEVIPAETPENALARAHRV 215
Query: 165 IKSKTAVLFS------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
I+ K+A + IA + + + +++G+ LG FQL DD L GE
Sbjct: 216 IQYKSAKYSCEHPLVLGGALALTAIAHQDHPILEKYRAFGLPLGEGFQLRDDELGVFGEP 275
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ GK G+D R GK T+ + L Q + ++ + + + +++ + + K +M ++
Sbjct: 276 SATGKPAGDDIREGKRTVLIALTTQNISAEDRRMLEGALGNPELTNQQISKIRELMIDSG 335
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQRL 321
AL E + +L LP S + +L + L R
Sbjct: 336 ALEHVEELIAQKSEAVDTALHALPVSEPIRCALSAIAAKALHRK 379
>gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47]
Length = 315
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/340 (23%), Positives = 126/340 (37%), Gaps = 59/340 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L+D V + E + V+Y + + GKRLRPMLT+ A
Sbjct: 16 ESLKDYMDARRPAVEVALEAACEDRPGVPERLAAAVRYAVLAPGKRLRPMLTIMAAEACG 75
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ + A A+E IH +L+H +DD LRRG+ + + T++L GD L S
Sbjct: 76 GDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSM 135
Query: 117 AFCMVIETKSQEALEALSL--------------VACTLAEGELRQLSLSKNLDVTEEDYL 162
AF + + S A + + E + D +
Sbjct: 136 AFAHLHHSTSDATKSAALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADAALKHLE 195
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT LF+A + ++ AG + AL Y G+AFQ+ DD+LD ++G
Sbjct: 196 AIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTSTDEQLG 255
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T P ++ L
Sbjct: 256 KRTGKDDGRGKLTYPGLM--------------------------------------GLDR 277
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A S A +SL+ + + L ++ DF L+R N
Sbjct: 278 ARAHAESTIHMAHESLQLF--GTAGRRLRKLADFVLERTN 315
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 111/307 (36%), Gaps = 52/307 (16%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85
E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+H +
Sbjct: 29 ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAM 88
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-------- 137
DD LRRG+ + ++L GD L S AF + + + AL L
Sbjct: 89 DDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAA 148
Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+ G+ L + L A++ ++ + +L
Sbjct: 149 GPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 208
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
Y +G+AFQ+ DD+LD + +GK+ G D KPT P
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYP------------------ 250
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ + + A +A +LR + L E+
Sbjct: 251 ----------------ALL----GMDAAKAYALELRDQALHALRPFD--FAAEPLRELAR 288
Query: 316 FCLQRLN 322
+ ++R N
Sbjct: 289 YIVERRN 295
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 83/346 (23%), Positives = 140/346 (40%), Gaps = 64/346 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI---CSDVEM------IPDVVKYLIFSGGKRLRPMLTLA 52
+ +N + I + V + + ++Y + SGGKR+RPML L
Sbjct: 37 SEFISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLV 96
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
++ + + ACA+E IH A+L+ DD+ LRRG V+G +TS+L
Sbjct: 97 ACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILAS 156
Query: 111 DFLLSQAFCMVIETKS----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+ L+S A + + S A ++ L G+ L+ + E+D
Sbjct: 157 NALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDD 216
Query: 161 YLH----VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
L + KTAVL AA V +++ G + + LKSY +G+ FQ++DDVLD
Sbjct: 217 ELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETK 276
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E+GK G+D GK T P ++
Sbjct: 277 SSEELGKTAGKDLITGKLTYPKVM------------------------------------ 300
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A ++A++ L+ DS L+ + D+ ++R N
Sbjct: 301 --GVDNAREYAKRLNREAQEHLQGF-DSDKVVPLLSLADYIVKRQN 343
>gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
Length = 298
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 53/321 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF ++ S
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLARPSSL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ + A++ +A L
Sbjct: 136 PASRQLAMLSVLAKAGGSSGMAGGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSENSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L AY +A L
Sbjct: 256 M--------------------------------------GLDGARAYAYQLTDEAVSLLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+ + + L ++ +F + R
Sbjct: 278 PFGNKALR--LRQLAEFTIAR 296
>gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
Length = 298
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 75/338 (22%), Positives = 130/338 (38%), Gaps = 59/338 (17%)
Query: 4 LEDLTLKDME----KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ + ++ +V + R+ S+ + + ++Y GGKR+RPMLT T
Sbjct: 1 MSNALKDYLDFCQNRVERALDARLPSESILPQKLHRAMRYSTLDGGKRMRPMLTYCTGKT 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + ACA+EFIH +L+H +DD LRRGK + + T++L GD L
Sbjct: 61 LGIAPEALDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKATCHVAFDEATAILTGDALQ 120
Query: 115 SQAFCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHV 164
+ AF ++ S A L + G+ L E
Sbjct: 121 ALAFEILANDPSITATAEGRLKMIIALTKASGSQGMVGGQAIDLESVGTKLTLPELENMH 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
I A++ ++ + A + V + L +Y +G++FQ+ DD+LD + +GK
Sbjct: 181 IHKTGALIRASVNMATLAKADIDPDVAKKLDNYAKCIGLSFQVKDDILDEESDTATLGKT 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D N KPT P ++ L +
Sbjct: 241 QGKDQDNDKPTYP----------------------------------ALL----GLAGAK 262
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++A D+L S L ++ + +QR +
Sbjct: 263 QKAQELHEQALDNLNIF--GSEADLLRDLSLYIIQRDH 298
>gi|109072227|ref|XP_001090452.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1
[Macaca mulatta]
Length = 399
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/346 (16%), Positives = 122/346 (35%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSRNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
GZfos37B2]
Length = 280
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 44/305 (14%)
Query: 15 VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+N I++ I D + +V+++ SGGK++RP++ + ++ + D V A AIE
Sbjct: 11 INGAIVRMIDDLDESNLKRIVRHVFDSGGKKIRPIILILSSELFGGDADECVDAALAIEL 70
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
IH+A+L+HDD++D +RRG + +G ++L GDFL+S++ ++ + +
Sbjct: 71 IHSASLIHDDILDVGLVRRGVPSVYNQFGLAAAILCGDFLISKSIELISKYDRAVIQDFG 130
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
L S + +E DY I KTA LF+A+ + S I G
Sbjct: 131 RAGMSMSEGEAL--DVNSNETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINR 188
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
YG +LG+A+Q++DD+L+ + + N TLP
Sbjct: 189 CTEYGTHLGMAYQIIDDILECKE------LQHEKKSENTATTLPH--------------- 227
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ ++ A+ + + +K + DS + L ++
Sbjct: 228 --------------------ILKHDAIDLSVKAVQHHVDCSKQIINSFNDSDVRIKLQKI 267
Query: 314 VDFCL 318
VD+
Sbjct: 268 VDYMT 272
>gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
Length = 288
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 39 FSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+GGK LRP L L + M + V LA +IE +H ATL+HDD++DDS RRG V
Sbjct: 3 NNGGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDIIDDSPERRGAV 62
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ + +G T+V GD L + F ++ S L + + +GEL Q+ NL
Sbjct: 63 SIQARFGKDTAVYAGDLLFTIFFDLLLEAIPSSAYLRVNAQAMRQILDGELGQMGQRFNL 122
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
T DYL +K KTA LF A + + AG + ++G LGIAFQ++DD+LDY
Sbjct: 123 QQTLADYLANVKGKTAALFKLAAQEGAHFAGGTADQVASAAAFGQQLGIAFQMLDDILDY 182
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G + +L + +++ ++++ +
Sbjct: 183 TGGKEL--NKPVLEDLATGVYSLPVLLALQDPASAAQVKPLLAKGRQLTATDIQRVQQYV 240
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+ + A + Q A L LP + ++ L + L+R N
Sbjct: 241 IAGGAVKKSRQLASQFTQGALTDLTKLPATKARRLLQHMTSQLLKRTN 288
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + L + + + + + ++Y + +GGKR+RP+L LA + G++ + L +E
Sbjct: 16 KALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESLLPLTLPLE 75
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HT +L+HDD+ +D+ LRRG+ +V+G ++L GD LL+ AF ++ + + L
Sbjct: 76 LVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLSDPVYDKVL 135
Query: 131 EALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A + G +S+ ++T + ++ + KT L A++ +
Sbjct: 136 PASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTGALLRASVRIG 195
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++AG + +AL YG +GIAFQ+ DD+LD G E+GK +D K T P ++
Sbjct: 196 GILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQKDAGKSKNTYPGLV 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ A ++A +++
Sbjct: 256 --------------------------------------GIDRARILAEEKCREAHEAVAV 277
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
S + L + + ++R N
Sbjct: 278 F--GSKGEPLARIASYIIERRN 297
>gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
Length = 343
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKRLRP+ + L D+ + + AIEF+H +L+HDD+ D R G+ +W
Sbjct: 54 GKRLRPLFCVLVNQTLGGFLDDALEIGSAIEFLHNFSLVHDDIQDRDEKRHGRWTVWKIW 113
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQ----EALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++ VGD L + F ++ KS ++L+ L+ L EG+ +S K D++
Sbjct: 114 GEAQAINVGDLLFNMVFQVLTNLKSPVLLSKSLKELTETIRELIEGQYLDISFEKRKDIS 173
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
++YL +I KTA LFS + + + A + + + + G + G+ FQ+ DD + G+
Sbjct: 174 LKEYLMMIDKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGD 233
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ GKN D K T P++ + +++EK + ++ ++++ +
Sbjct: 234 PEKTGKNAFVDLWRKKKTYPILYLYSESSEKEKLRIEEIWGREIVTEKDIEYLLDHLERK 293
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD------FCLQRL 321
R T A Y + L D L ++ + F LQR
Sbjct: 294 RVKEATFNLAEKYFDEGYKKLLSFQDLYNISLLRKLFEDYYNLIFSLQRS 343
>gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
118893]
gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
118893]
Length = 491
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A +
Sbjct: 229 PSQRRLAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFI 288
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E L V L EGE QL + + +I K+A L S
Sbjct: 289 ARLRDPEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 348
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 349 KSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 408
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + K + +++ A I+ ++ L T A Y A
Sbjct: 409 TSPLLFAWKQRPELGK-----LVGRKFSREGDVQLARQIVAQSDGLEQTRALAQQYADDA 463
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 464 VAAISKFPDSEAKDGLIEICRKTINR 489
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + + + S ++ V KY S GK++RPML L +
Sbjct: 102 MVGKELKFLKKNLRSLLGSGHPILDQVAKYYAQSEGKQVRPMLVLLMSQA 151
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDGDA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 438
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/355 (20%), Positives = 152/355 (42%), Gaps = 34/355 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------------CSDVEMIPDVVKYLIFSGGKRLRPM 48
+K+ +++ ++ +IL + SD + + + + GK +RP
Sbjct: 85 LKIFYQQIKEEIVQIYRIILSELYSNLFFNIKIQLKSDHDYVNKISGHYYSKEGKLVRPS 144
Query: 49 LTLATAL-MLEYRG----------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
L + + + + L A IE IH ++L+HDD++D++ RRG A
Sbjct: 145 LNFLLSQILFDGTTQEFFEKKDLVEKQRLWAAVIENIHVSSLVHDDIIDNAFTRRGLETA 204
Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
+ +G++ +V GD+++ ++ + + S + L GE+ Q + +
Sbjct: 205 HVKFGHREAVFSGDYIIGRSGQQISRFNDIRMYQIYSHIMENLTHGEINQANSKRTYKYD 264
Query: 158 EEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
++ ++ KTA L + + + +I ++ L + +LGI+FQL DD+LD
Sbjct: 265 LDEIINQYILKTYYKTASLMAFSAQGVGIILNQDFHNQECLFKFAQHLGISFQLADDMLD 324
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
Y + ++GK D + G T PV+ A + E++ + + + + I
Sbjct: 325 YTSDSAQLGKAALADLKEGNVTGPVLFALEEIDGTEEHRQITAMLQKHPKGLDDNQV-KI 383
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCL------PDSSWKKSLMEVVDFCLQRLN 322
+++ L T A + Q+A ++L+ L KSL ++ ++R +
Sbjct: 384 VKKTYGLEKTTNLALIHSQRALENLQNLKGVKDIEKKDAYKSLNYLLMKIIKRKS 438
>gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 295
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/334 (20%), Positives = 129/334 (38%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ LT E+V+ + + + + + +++ + GGKR+RP L + A +
Sbjct: 2 TINSLTAATREQVDSFLKQALAQLTLNPRLNQAMQHGVLMGGKRIRPYLLVTVADICGAN 61
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + A A+E IH +L+H +DD LRRG+ + + T++L GD L + AF
Sbjct: 62 KNDALQAAAAVELIHAYSLIHDDLPAMDDDDLRRGQPTCHIAYDEATAILAGDALQTLAF 121
Query: 119 CMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ E + ++ L A + G+ L + + + +
Sbjct: 122 EVLTENRMEQLPSERQLQLVQVLAKASGARGMCAGQAIDLQATAKIVTEDALEQMHLSKT 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +AA R+ + + LG+AFQ+ DD+LD G +GK G D
Sbjct: 182 GALITAAATMGVLCGNDNAQQWREKFEQFAHYLGLAFQVQDDILDVTGNTEALGKPQGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ K T +L + + R
Sbjct: 242 TASEKSTYVRLL--------------------------------------GIEGAQQRLQ 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ KA SL +P ++ + L + D L+R +
Sbjct: 264 NLHHKALQSLSDIPYNTDR--LEQFSDLLLKRDH 295
>gi|301763920|ref|XP_002917381.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like
[Ailuropoda melanoleuca]
Length = 398
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 66 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVYDSRHNLQ-----LRGLVVLLISKA 120
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ + L+ +
Sbjct: 121 AGPSSMNTSCQKYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 180
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S S + ED
Sbjct: 181 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENHITED 240
Query: 161 -----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 241 IGISAWKKQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQPFI 300
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + V+ G + G++ + K ++
Sbjct: 301 KEKTSDSMAFNLNSA-----PVVLHQEFLGRELWIQQIGEAQEKGRL---DYAKLRETIK 352
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L+ P S + +L +V F + R +
Sbjct: 353 AGKGVTSAIDLCRYHGNKALEALQSFPPSEARSALENIV-FAVTRFS 398
>gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus
Af293]
gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
fumigatus Af293]
gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
fumigatus A1163]
Length = 357
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 114/293 (38%), Gaps = 5/293 (1%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+D ++I + YL GK +R L A L+ D ++ + +H+A+LL DD+
Sbjct: 66 ADDKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDI 125
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ +F A + + EA+ + L G+
Sbjct: 126 QDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRGQ 185
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L +L E+ + + ++ + +++ + LGI
Sbjct: 186 GLDLYWRDSLTCPTEEEYLEMVANKTGGL---FRLAIKLMQMESHNTEDCVPLVDLLGII 242
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K GED GK + P+I + + + +
Sbjct: 243 FQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPIIHSIRS--DPSNFQLMNILKQKTEDE 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + A I+ + + + +A++ L+ D L ++DF
Sbjct: 301 DVKRYAVRIIESTGSFDHCRKKLENLTAEAREILKDFGDLGNTDGLKGILDFL 353
>gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 310
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/331 (17%), Positives = 112/331 (33%), Gaps = 38/331 (11%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--------DVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ + + E + + + ++Y GGKRLRP L + T
Sbjct: 8 EDFQQRLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVET 67
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGD 111
A + G+ + A A+E IH +L+HDD+ D+ LRRG+ + T++LVGD
Sbjct: 68 ARLFGIEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGD 127
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LL+ AF ++ + + + + LA + + E +
Sbjct: 128 GLLTYAFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAK-------T 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+A + + A+ + + G++ Q + + Y + + +
Sbjct: 181 PHTAEAVIELQSMKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDV 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T + GK + ++ + + + L R +
Sbjct: 241 EADTEAL---------------------GKKAGKDADRNKATLVASLGLEAARKRRDTLS 279
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L P+ L E F R N
Sbjct: 280 AEAIAALDSFPEGREAHILKEAARFAATRKN 310
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
Length = 339
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 121/317 (38%), Gaps = 20/317 (6%)
Query: 22 RICSDVEMIPDVVK----YLI-----------FSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + E +P+ ++ Y GGK LRP L L A + V
Sbjct: 27 ALRTAAERLPETMRRIAAYHFGWQDADGRPAATDGGKALRPALVLLCAEAAGGEAADAVP 86
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDDV+D RR + A V+G +VL GD LLS AF ++ + +
Sbjct: 87 AAVAVELVHNFSLLHDDVMDGDTTRRHRATAWTVFGTGPAVLAGDALLSLAFEVLAPSGA 146
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ Q + + I+ + +L A
Sbjct: 147 ----ANAKVLSAATLALLEGQAADLDFEQRDDVTPGECIRMAEGKTAALLGAACTLGATS 202
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ ++G +G+AFQ VDD+L G+ GK + D +N K +LPV+ A GT
Sbjct: 203 GPAGADRFGAFGRAVGLAFQHVDDLLGIWGDPAVTGKPVYSDLQNRKKSLPVVTALSSGT 262
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSS 305
+ + L +A ++ ++ +A + KA L P S
Sbjct: 263 PAGADLATLYARREPLDETALARAASLVEAAGGRQWSQAQAEALLAKALRDLTAAAPPSR 322
Query: 306 WKKSLMEVVDFCLQRLN 322
L + R +
Sbjct: 323 ATAELTSLARLITTRTH 339
>gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
17931]
gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
17931]
Length = 380
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 40/344 (11%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-------GDNHVLLAC 69
+L I D + + ++ + SGGKRLR +L+ +
Sbjct: 37 RTLLTAISHDALPLLEAIE-SLSSGGKRLRALLSYWGWRGAGGDSILEGSAPAPIIRAGA 95
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVGDFL 113
A+E +A L+HDD++D S RRGK + + Q ++ GD
Sbjct: 96 ALELFQSAALIHDDIIDRSDTRRGKPSVHKKFETQHIQNSWVGDTFNYGLTGGIIAGDLC 155
Query: 114 LSQAFCMVI---------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
LS + M + V L ++ ++ + V
Sbjct: 156 LSWSEQMFSSIGEGALSGTEARNIFDTMRTEVMAGQYLDVLSEVIPAETPENALARAHRV 215
Query: 165 IKSKTAVLFS------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
I+ K+A + IA + + +++G+ LG FQL DD L GE
Sbjct: 216 IQYKSAKYSCEHPLVLGGALALTAIAHQDHPILGKYRAFGLPLGEGFQLRDDELGVFGEP 275
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ GK G+D R GK T+ + L Q + ++ + + + +++ + + K +M +
Sbjct: 276 SATGKPAGDDIREGKRTVLIALTTQNISAEDRRMLEGALGNPELTNQQISKIRELMIGSG 335
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQRL 321
AL E + +L LP S + +L + L R
Sbjct: 336 ALEHVEELIAQKSEAVDTALHALPVSEPIRCALSAIAAKALHRK 379
>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 295
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 119/325 (36%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++E + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVDTALEPLFIAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + ++L GD L S AF +++
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPHLS 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L + G+ L + A++ ++
Sbjct: 131 PQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGALIEASVR 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A + + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A +
Sbjct: 251 ----------------------------------ALL----GLEAAKAYAIELRDQALIA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L+ + L + + ++R N
Sbjct: 273 LQGF--GETAEPLRALARYIVERRN 295
>gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 280
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/318 (21%), Positives = 134/318 (42%), Gaps = 44/318 (13%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + + + + + S D + ++ ++ +GGKR+RP ++L + ++
Sbjct: 2 EYLERRRDLIETRLEDVLASVDPAELSSELENVVLAGGKRVRPTVSLLVCEAVGAEPEDA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V A +E +H A+L+ DD++D+S RR +A +G+ +++ D L+ +AF +
Sbjct: 62 VDFAVGVELVHNASLVVDDIIDESDRRRDSPSAWSAFGHGPALIASDGLIGEAFALFS-- 119
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A+ V+ + E + + + +E+ Y + + KT LF AA E+ ++ A
Sbjct: 120 ---TDERAMRAVSEAMVELGEGEATELAAMPDSEDAYRQLARRKTGALFRAAAELGAIAA 176
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+A Y +GIAFQ+ DDVLD G+ ++GK G D +P++ +
Sbjct: 177 DADARTVEAFGQYAEQVGIAFQIRDDVLDATGDAEQLGKPAGHDAEMDRPSIVQVTDLSP 236
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+ RA S A D L +P
Sbjct: 237 A------------------------------------EATERARSEADAALDQLETVPVE 260
Query: 303 DSSWKKSLMEVVDFCLQR 320
+ + L ++ +F ++R
Sbjct: 261 NEQAVEYLRDLANFVVER 278
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/319 (20%), Positives = 128/319 (40%), Gaps = 55/319 (17%)
Query: 17 FLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ + + +I + ++Y + +GGKRLRPML + T + + A+E
Sbjct: 16 AILREYLPEANGYQSVIMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEM 75
Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF + Q E
Sbjct: 76 IHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEE 135
Query: 132 ALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSS 181
+L + + + + ++ +E+ L I KT L +A+ + +
Sbjct: 136 SLRIGQAMRVLARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG ++++ +G+AFQ+ DD+LD ++GK + D +N K T +
Sbjct: 196 ILAGASKEDVKSMQKIAGKIGMAFQIQDDILDVTSTTEQLGKPVHSDEKNEKTTYVTL-- 253
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++A D L+
Sbjct: 254 ------------------------------------KGIEQAHKDVERMTEEAIDELKKF 277
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L +++ + R
Sbjct: 278 PAGD--NFLEQLLKSLVYR 294
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/337 (23%), Positives = 135/337 (40%), Gaps = 55/337 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
++ ++ + E V+ ++ + SD +I + Y IF+GGKRLRP++ L A +
Sbjct: 5 LEHFQEEIRQRKEFVDNCLIGCLLSPDSDPPLIHQAMHYAIFNGGKRLRPIMVLEGAKIA 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +ACA+E IH+ +L+HDD+ RRG+ V+G +VL GD LL+
Sbjct: 65 GGEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLTGDALLT 124
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ E S ++ + + G ++ + E +
Sbjct: 125 AAFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYESLRKLH 184
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT LF AAL +++ G+ AL Y N G+AFQ+ DD+LD +G+ GK++
Sbjct: 185 CLKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGDAALTGKSM 244
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D R K T P +L L +
Sbjct: 245 GSDARKEKNTYPSLL--------------------------------------GLEKSRQ 266
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
SL + L ++ + L R +
Sbjct: 267 LLEESIATCLQSLELF--GPEAEFLRQLACYTLYRKS 301
>gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS
112818]
gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS
127.97]
Length = 491
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A +
Sbjct: 229 PSQRRLAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFI 288
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E L V L EGE QL + + +I K+A L S
Sbjct: 289 ARLRDPEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 348
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 349 KSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 408
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + K + +++ A I+ ++ L T A Y A
Sbjct: 409 TSPLLFAWKQRPELGK-----LVGRKFSREGDVQLARQIVSQSDGLEQTRALAQQYADDA 463
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 464 VAAISKFPDSEAKDGLIEICRKTINR 489
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + + + S ++ V KY S GK++RPML L +
Sbjct: 102 MVGKELKFLKKNLRCLLGSGHPILDQVAKYYAQSEGKQVRPMLVLLMSQA 151
>gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
Length = 427
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A +
Sbjct: 165 PSQRRLAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFI 224
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E L V L EGE QL + + +I K+A L S
Sbjct: 225 ARLRDPEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 284
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 285 KSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 344
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + K + +++ A I+ ++ L T A Y A
Sbjct: 345 TSPLLFAWKQRPELGK-----LVGRKFSREGDVQLARQIVSQSDGLEQTRALAQQYADDA 399
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 400 VAAISKFPDSEAKDGLIEICRKTINR 425
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + + + S ++ V KY S GK++RPML L +
Sbjct: 38 MVGKELKFLKKNLRCLLGSGHPILDQVAKYYAQSEGKQVRPMLVLLMSQA 87
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 125/324 (38%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ +V + + +D + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LARVEDALGHYLPADTVVPGTLHEAMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ +LV +A G+ L+ + E+ A+L ++
Sbjct: 131 LSPQQQAALVRELALASGSIGMAGGQAIDLASVGQMLTREQLETMHRMKTGALLRASVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +AL +Y +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 191 GALAGETPTADTMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A +L
Sbjct: 249 --------------------------------VSII----GLDASRELAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 QPF--GARAQRLAELADLVVNRVS 294
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRAEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
Length = 295
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++D+ +V+ + + + E + ++Y +F+GGKRLRP L A A +
Sbjct: 1 MSSIKDIISHYSAQVDAQLEAMLPAATGPAEPLFAAMRYSVFNGGKRLRPALCFAAADAV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
N +A A+E IH +L+H +DD LRRGK + + T++L GD L S
Sbjct: 61 AGSDANTAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGDGLQS 120
Query: 116 QAFCMVIETKSQEALEALS--------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF + E + + + G+ L+ + ++ + +
Sbjct: 121 LAFQQLCELSELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKVMHAHK 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ ++ L + ALK + +G+AFQ+ DD+LD ++GK G
Sbjct: 181 TGALIEASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVESSTEQLGKQQGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D N K T IL L A
Sbjct: 241 DATNLKSTYTSIL--------------------------------------GLERARSEA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ + L L + F ++R +
Sbjct: 263 AKLFDQSMEILENF--GEKADPLRAIAAFIVKRNH 295
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
Length = 295
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/325 (20%), Positives = 122/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + ++++ + + ++Y + +GGKR+RP+L A L+ D AC
Sbjct: 11 ARVDAALEPLFQPPRAELQRLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRADGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + +++L GD L S AF ++ + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLADRRRN 130
Query: 128 EALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L + G+ L A++ ++ L
Sbjct: 131 PQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRHKTGALIEASVL 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +AL Y +G+AFQ+ DD+LD + +GK G+D N KPT P
Sbjct: 191 LGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTATLGKTQGKDEANDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A
Sbjct: 251 ----------------------------------ALL----GLDAAKDYALELRDQALHV 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
LR S + L E+ + ++R +
Sbjct: 273 LRPF--GSQAEPLRELARYIVERRS 295
>gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1]
Length = 365
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/336 (18%), Positives = 122/336 (36%), Gaps = 32/336 (9%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNH--VLLACAIE 72
++ I +++ + D + +GGKRLRP A + + + A ++E
Sbjct: 29 EKRVIDAIGAELSPVLDAARDYT-AGGKRLRPAFCYWGHAAAADQPTEPAGLLQAAASLE 87
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-----------------------LV 109
F+H + L+HDD++D S RRG + + + +
Sbjct: 88 FLHVSALVHDDLMDHSDTRRGLPSVHRHFEAAHGIAHGDGPAEQFGFDIAILLGDLLLMW 147
Query: 110 GDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-- 165
+ + A + + V C Q ++ + + D + +
Sbjct: 148 SSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVE 207
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ ++ +AG + ++Q + +G +G AFQ DD+L G+ GK
Sbjct: 208 YKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPA 267
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D R GK T+ V A R + KS + + ++ A I+ + A E
Sbjct: 268 GDDLREGKRTVLVAHALNRADSHDAARLKSLLGRPDLDDNDVATARRIIETSGAREAVES 327
Query: 286 RAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
A L + + +L E+ C++R
Sbjct: 328 TIVQCHDHAIAVLDDAEMTDAGRIALRELARQCVER 363
>gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 354
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/331 (24%), Positives = 133/331 (40%), Gaps = 25/331 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAI 71
E+++ L+ + D+ + D ++ + + GKRLR D V A A+
Sbjct: 28 EEIDHLL--AVDGDLAPVADRLR-IATNRGKRLRAAFCYWGWRAAGQPDSDALVRAAAAM 84
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAAR-------------LVWGNQTSVLVGDFLLSQAF 118
E +H A ++HDD++DDS LR G A ++LVGD L+S A
Sbjct: 85 ELVHAAAVVHDDLIDDSPLRHGLPTAHVALRAAVVASPRPGAAARSLAMLVGDLLMSWAG 144
Query: 119 CMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ A +++A L GE ++ + T +
Sbjct: 145 QLFTACGLPAAYLSRARPLWAVLARELVAGECLEILRTGAHPDTAASLKVIRYKTAKYTV 204
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
L + + G +R+AL YG+ LG AFQL DD+L G+ GK +D +
Sbjct: 205 EHPLHIGGALGGACEELREALSDYGLPLGEAFQLRDDLLGLFGDPARTGKANTDDIAVHR 264
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT + +Q T E+ + +G E+L + IM RA E + +
Sbjct: 265 PTALLAWTWQEATATERAELGGLLGNGTTDAESLARVREIMHRTRAPARIEEMIGARVRA 324
Query: 294 AKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
A D+L LP + + +L ++ RL+
Sbjct: 325 ALDALDRIRLPADAAR-ALSDLARAATVRLH 354
>gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + ++ + + ++Y + GGKR+RP+L A + A
Sbjct: 11 LDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ +LV +A G+ L+ E+ A+L +A
Sbjct: 131 LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVS 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL L + A +A D+L
Sbjct: 251 IL--------------------------------------GLDASRELAAQLRTEAHDAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L E+ D + R++
Sbjct: 273 KPF--GARAQRLAELADLVVNRVS 294
>gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
Length = 220
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG NLG+AFQLVDD+LDY E+GK G D G T P+I A++ +
Sbjct: 98 YDYGKNLGLAFQLVDDMLDYTISEKELGKPAGADLELGLATAPLIFAWKNNKELGS---- 153
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ ++ +A ++ ++ L T A Y +A ++ PDS K L+E+
Sbjct: 154 -LVGRKFSQEGDVLRARELVLQSDGLEQTRALAEEYASRAISAISAFPDSEAKDGLIEMA 212
Query: 315 DFCLQR 320
D L+R
Sbjct: 213 DKTLKR 218
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 54/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + VN + + + + + V+Y + +GGKR+RPML +A+ ++
Sbjct: 65 DFKSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIASCELVGGNE 124
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF
Sbjct: 125 ATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFE 184
Query: 120 MVIETKSQEALEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ S + A + D E +
Sbjct: 185 HMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLERLEFIHLH 244
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L AA + ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+
Sbjct: 245 KTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTEELGKTAGK 304
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L + A
Sbjct: 305 DLMAGKLTYPRLI--------------------------------------GLERSREVA 326
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A++ + DS L+ + + R N
Sbjct: 327 EKLRKEAEEQVLGF-DSENSAPLVALASYIACRHN 360
>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
Length = 293
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVETALEHYLPAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAERLDAAA 70
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH +L+HDD +DD LRRGK + + T++LVGD L SQAF +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAFVVLTSDVL 130
Query: 121 -VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + AL+ + + G+ L+ + A+L +A
Sbjct: 131 GQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRALAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 55/323 (17%)
Query: 13 EKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++V+ + + S + + + ++Y + + GKRLRP+LTL A +
Sbjct: 18 DEVDQALN--VYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAMPS 75
Query: 68 ACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
ACA+E IH +L+H +DD LRRG+ + T++L GD LL++A +V +
Sbjct: 76 ACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARALEIVADGY 135
Query: 126 SQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A S T G + E + + KT + +L +
Sbjct: 136 QDPLVAARSCRELAKAAGATALVGGQADDLNEQFGSGDVEMLKAIHRRKTGAMICVSLRL 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++ AG + L YG +G+AFQ+VDD+LDY G+ +GK +G+D GK T P +
Sbjct: 196 GAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAALGKRVGKDAERGKLTYPGL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + ++ +A S AK SL
Sbjct: 256 I--------------------------------------GVAESRRQAESLIAGAKQSLA 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
L + + L+R +
Sbjct: 278 DF--GERANHLEALAQYILERNH 298
>gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
Length = 298
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 74/322 (22%), Positives = 126/322 (39%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRGK + +G T++LVGD L +QAF ++
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRPTEL 135
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L++ + +A G+ L+ + A++ +A +
Sbjct: 136 PAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 AMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A+ +A L
Sbjct: 256 M--------------------------------------GLEAARSYAHKRVAEAVALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + L ++ +F + R
Sbjct: 278 PFGGKALR--LRQLAEFAVARK 297
>gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
Length = 297
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S E + + ++Y+ GGKRLRP+L A A + + A
Sbjct: 15 AQTEILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAELGDSVQAACEAAAV 74
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRGK + + T++LVGD L + AF ++ +
Sbjct: 75 AVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDALQTLAFDVLSTATAL 134
Query: 128 EALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ ++ +A G+ L+ + A++ +A
Sbjct: 135 SPARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMHGWKTGALIRAAVALG 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + ++ AL +Y LG+AFQ++DDVLD + +GK G+D KPT +
Sbjct: 195 ALSCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEADTATLGKTAGKDAEANKPTYVKL 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A + Q+A D+L+
Sbjct: 255 M--------------------------------------GLTAAREYANTLIQQAIDALQ 276
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + + L ++ +F + R N
Sbjct: 277 LFDERADR--LRQLAEFVVIRKN 297
>gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
Length = 337
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 114/325 (35%), Gaps = 25/325 (7%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHT 76
I + + E + + GKRLR + + A ++E +H
Sbjct: 18 RIDQALRPVAEQLRRAAAH-----GKRLRAAFCYWGWRAAGQPDSEALLRAAASLELVHA 72
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVL------------------VGDFLLSQAF 118
A +HDD++DDS LR G + + + + A
Sbjct: 73 AATVHDDLIDDSPLRHGLPTVHVALRSALTGRPRAGAVARDLAMLVGDHLMALAGRLFAD 132
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
C + A +A L GE ++ + T+ + L
Sbjct: 133 CGLPAAYLARARTLWGDLARELIAGECLEILHTGGRPDTDTSLKVIRYKTAKYTVEQPLL 192
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L+AG +R +YG+ LG AFQL DD+L G+ GK +D R +PT +
Sbjct: 193 LGALLAGAAPDLRAGFSAYGLPLGEAFQLRDDLLGLFGDPVHTGKAPLDDLRGRRPTALL 252
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
A+Q + T+ + E+L + ++ A E + +KA L
Sbjct: 253 ARAWQAAPPDSREELAGTLGRPDLDEEDLARVRELLVGLEAPKRVEEMIDTRVRKATGVL 312
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRLN 322
L + +++L + R +
Sbjct: 313 DGLAVPAPARRALSALAHSATDRRH 337
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 54/323 (16%)
Query: 14 KVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N + + I + + D +KY + GGKR+RP L AT ML + A A
Sbjct: 14 RINSFMENQFNDINTFGSPLADAMKYGLLLGGKRIRPFLVYATGDMLGADLNALDYAAAA 73
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IH +L+HDD+ +D+ LRRGK + + + T++L GD L + AF ++ ++ +
Sbjct: 74 IESIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQTFAFEIITKSTALC 133
Query: 129 ALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A + L LV L L+ K + + E + +H K+ + + +
Sbjct: 134 AEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGF 193
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++ LK Y +G+AFQ+ DD+LD G E+GK +G D K T P +
Sbjct: 194 ICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEGNTVEIGKTVGADLNLDKSTYPKM 253
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + +A Q A +L
Sbjct: 254 L--------------------------------------GLDGAKSKAQELYQSAVKNLN 275
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ S +L + +F + R N
Sbjct: 276 EI--SFDTTALRALAEFIIHRKN 296
>gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400]
gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400]
Length = 293
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 126/331 (38%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + +VN ++ + + + + + GGKR+RP L + ML
Sbjct: 1 MLAEAITTYQNRVNGILNQHLTLLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGDMLGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 NINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKT 169
F ++ + + + LA+ Q + + + KT
Sbjct: 121 FEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTELHNKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A V + + + Y LG+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGKPQGSDQ 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
++ K T P +L L + A
Sbjct: 241 QSNKSTFPKLL--------------------------------------GLDGAKACAEQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q A +L LP +S + + + + ++R
Sbjct: 263 LIQDALSALTKLPYNS--QLIADFAHYIIER 291
>gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
Length = 296
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 59/332 (17%)
Query: 10 KDMEKVNFLILKRI----------CSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
D +++ + + DV + + +++ + + KRLRP+L L
Sbjct: 5 ADFRELSKTLRSEVDDALVATTEYGPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEACG 64
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
Y + A A+E IHT +L+H +DD +RRG+ + +G T +L GD LL+Q
Sbjct: 65 YDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLAQ 124
Query: 117 AFCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF ++ + A + G ++ D+ + + KT
Sbjct: 125 AFEVLAADHLPGPVVAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRRKTG 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ +L + ++IAG + V AL YG LG+AFQ+VDD+LD G+ MGK +G+D
Sbjct: 185 AMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGDQQLMGKRVGKDSE 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P +L + RA
Sbjct: 245 AGKLTYPKLL--------------------------------------GAEASRQRAEML 266
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A S+ D +L+ + + L+R +
Sbjct: 267 VAEAIASVSR--DDLSSGALIALARYVLERKH 296
>gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
Length = 297
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/323 (22%), Positives = 126/323 (39%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + S+ + + ++Y + GGKRLRP+L LA + + + D
Sbjct: 15 AQTETLLENLMPSENHAPQELHRAMRYAVLGGGKRLRPLLVLAASELGQADPDATAHAMA 74
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRGK + +G ++L GD L + AF ++ +
Sbjct: 75 AVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDIITRPAAL 134
Query: 128 EALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A L + A +A G+ L+ E A++ +A
Sbjct: 135 PAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALIRAAVRLG 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ ++ +L SY LG+AFQ++DDVLD + +GK G+D +N KPT +
Sbjct: 195 GLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAADTATLGKTAGKDAQNNKPTYVSL 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ A + +A +L
Sbjct: 255 M--------------------------------------GEKAAAQYAETLTAQALAAL- 275
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+P S ++L + F +R N
Sbjct: 276 -VPFGSRAENLRALARFVTERKN 297
>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/323 (18%), Positives = 121/323 (37%), Gaps = 21/323 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + L +++++ + +D + + +Y + +GGKRLRP+L L +A
Sbjct: 8 VEQFQTLIKEELDR-----AAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQACSG 62
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + + A AIE +HT +L+H +DD LRRG+ + T++L GD LL++A
Sbjct: 63 KPEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLLTRA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F + + A+ V + + + D+ E I+SK++ +
Sbjct: 123 FETLAAGI-VDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEETAENP 181
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
S A +Q + G + A ++ + + G+ +
Sbjct: 182 AEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMD 241
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
IL + K++ L L + A S +A+++
Sbjct: 242 DILDCTSTVEAMGKGVGKDAGRDKLTYPGLL----------GLQASREHAESLVHEAQEA 291
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
+ L L V + + R
Sbjct: 292 ISEL--GPPADGLRAVATYIITR 312
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 52/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + V+ + + + E + + ++Y + +GGKR+RP+L LA ++
Sbjct: 83 DFQRYLSARADAVHDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDA 142
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ACA+E IHT +L+HDD+ LRRG+ + + +G T++L GD L + AF
Sbjct: 143 AAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFE 202
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY----------LHVIKSKT 169
V + A + G V +++ ++ KT
Sbjct: 203 HVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKT 262
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L AA +++ G ++ + ++ Y +G+ FQ+VDDVLD ++GK G+D
Sbjct: 263 ARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDV 322
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L + A
Sbjct: 323 EADKATYPKLL--------------------------------------GVDKAREYAAD 344
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+ L D+ L + F R +
Sbjct: 345 LLAMAEAELDGF-DAERAAPLRHLARFIAYRQH 376
>gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 283
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 49/320 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + K + K+N + + + S+ E I + ++Y + GGKR+RP++ A +
Sbjct: 8 INPLLETYGKYINKINQALDRELSLYSESEFI-EPLRYSLE-GGKRIRPIILSLAAESVG 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
DN + +CA+EF+H +++HDD++D+ +RR + + +G TSVL GDF+L
Sbjct: 66 KIDDNTLAASCAVEFLHMESIIHDDIIDNETMRRQREPFHIKYGYNTSVLTGDFVLGLIL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ A ++EGE+ + L + DVT +DYL VI+ KTA F A
Sbjct: 126 AISSRLDNARITKDLATTAMLMSEGEMIESRLESSEDVTFDDYLKVIEYKTATAFEVAAR 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++IA +AL YG N+GIA+Q+ DD+LD++ E I +
Sbjct: 186 IGAIIASGSEEEIEALTEYGKNIGIAYQIRDDLLDWKNEDKLFNLLIKKSSDPR------ 239
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
E Y KA+ SL
Sbjct: 240 ---------------------------------------DVFNKMEELLKKYSDKARTSL 260
Query: 299 RCLPDSSWKKSLMEVVDFCL 318
R +P++ K +L ++ F
Sbjct: 261 RKIPNNDAKINLDNLIKFTT 280
>gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980]
gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 220
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG NLG+AFQLVDD+LDY E+GK G D G T P+I A++ +
Sbjct: 98 YDYGKNLGLAFQLVDDMLDYTITEKELGKPAGADLELGLATAPLIFAWKNNRELGS---- 153
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ ++ +A ++ ++ L T A Y +A ++ P+S K L+E+
Sbjct: 154 -LVGRKFSQEGDVLRARELVLQSDGLEQTRALAEEYANRAISAISAFPESEAKDGLIEMA 212
Query: 315 DFCLQR 320
D L+R
Sbjct: 213 DKTLKR 218
>gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20]
gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20]
Length = 295
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 61/333 (18%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
Query: 120 MVIETKSQEALE---------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ +T + + + V L +S K + ++E + +H K+
Sbjct: 125 ILTKTPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGAL 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ + L + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D
Sbjct: 185 LIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L + +A
Sbjct: 245 LDKSTYPKLL--------------------------------------GLSGAKQKAQDL 266
Query: 291 GQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
Q A L +P D++ + + +F + R +
Sbjct: 267 YQSALSELEKIPFDTTVR----ALAEFIITRKS 295
>gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
Length = 280
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 44/318 (13%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + V+ + + S + + + + V + SGGKR+RP +T+ + D+
Sbjct: 2 EYLERRRALVDERLESVVGSVEPDGLAEEVGHTALSGGKRVRPTVTVLVCEAVGGEPDDA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V IE +H A+L+ DD++D SA+RRG +A +G +++ D L +AF +
Sbjct: 62 VGFGVGIELVHNASLVIDDIIDRSAMRRGVESAWTRYGYGPAIVGSDAQLGEAFALFS-- 119
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A V + E + + TE +Y+ + + KT LF AA E+ ++ A
Sbjct: 120 ---SDPRATQAVTEAMVELGEGEATELVARPETEAEYMELARRKTGALFRAAAELGAIAA 176
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+A+ Y +GIAFQ+ DDVLD + +++GK G+D +P+L +
Sbjct: 177 DADAVTVEAVGEYAERVGIAFQIRDDVLDATADADDLGKPTGQDDEMERPSLLQVTDL-- 234
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+ RA+ + + A D+L +
Sbjct: 235 ----------------------------------GPEEANERAHDHSEAALDALSRVEVA 260
Query: 303 DSSWKKSLMEVVDFCLQR 320
D + L ++ +F + R
Sbjct: 261 DERAHEYLQDLAEFVVIR 278
>gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 348
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 26/327 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I D + ++ + +GGKRLRP + E D +LL A+E +H
Sbjct: 21 AYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATEAPDDQALLLFSALELLHACA 80
Query: 79 LLHDDVVDDSALR----------------RGKVAARLVWGNQTSVLVGDFLLSQAFCMV- 121
L+HDDV+DDSA R R + +G ++L+GD L+ A +V
Sbjct: 81 LVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAWADDIVL 140
Query: 122 ----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ + + + G+ + + + ++V KTA +
Sbjct: 141 GVDLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRP 200
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 201 LQLGAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVL 260
Query: 238 VILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ A + K + K + ++S + + ++ AL E R + Q+A
Sbjct: 261 LAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLRDVIESVGALAAAEQRIATLTQRAL 320
Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+L P +++ K L E+ R
Sbjct: 321 ATLAAAPINTAAKAGLSELAKLATNRS 347
>gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
Length = 203
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
M++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E+
Sbjct: 1 MMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACEL 60
Query: 180 ---SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
S+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TL
Sbjct: 61 AGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTL 120
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P I A T++++ K I G+ + + +++++ A+ + A Y AK
Sbjct: 121 PTIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQ 177
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LPDS +K++++ + D + R N
Sbjct: 178 QIDFLPDSEYKQAMILLCDLAVNRKN 203
>gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 341
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 3/311 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNH 64
L M ++ + +I + I + Y I + GKR+RP L +
Sbjct: 21 ALLKPHMAALDTFLAGQISAFEPEIRSMADYCIDTSGKRIRPALVFLGGWRGNGMVAPDL 80
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V +A +E +H ATL+HDD++D + +RR + A +G +VL+GD L + A + +
Sbjct: 81 VRVAAVVELVHLATLVHDDIMDGAEVRRNRRTAAREFGAAGAVLLGDALFAHALHLAAQF 140
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E A+S + GE+ Q +V+ DY +I KTA LF + + + +A
Sbjct: 141 PTTEVCAAVSESTRRVVSGEIVQTLRRGTTNVSRADYFRIIDLKTAELFRVSCFLGARLA 200
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G +A+ +G +LG+A+Q+ DD+ DY G+ ++GK +G D +GK TLP+I +R
Sbjct: 201 GSAPGYVEAVSRFGEHLGVAYQIYDDLADYFGQEAKIGKTLGTDLASGKLTLPLIALSER 260
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ ++ + I G+ S +L M E S A ++++ P+
Sbjct: 261 LSATDQADLAAEI-RGQRSP-DLATRLQQMNELGVFGVVAEAVQSELAVATEAVQEWPNE 318
Query: 305 SWKKSLMEVVD 315
+ L+ + D
Sbjct: 319 APTPLLLSLCD 329
>gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988]
Length = 388
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 26/321 (8%)
Query: 13 EKVNFLILKRIC--SDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVL 66
E++N + + +DV ++ + ++ + +GGKR+RP+L + G + +
Sbjct: 54 ERLNAFLDAKSGRDTDVHLVSLIEHLRDFLAAGGKRIRPLLCMVGWHAAGGYGETEPIIG 113
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A ++E H TL+HDDV+D S RRG+ + + + + ++ +
Sbjct: 114 AAASLELFHAFTLIHDDVMDASDTRRGRPTLHRTLETGANGTTAERFGTNSAILLGDLVM 173
Query: 127 QEALEALSL-----------------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ E L + + G+ R L + E L VI+ KT
Sbjct: 174 VWSDELLYSSGLDQQQLVAVRPLLDAMRTEVMIGQYRDLLSTGQPTADVERSLAVIRYKT 233
Query: 170 A-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A L + + +AG S+ +Y + +G AFQL DD+L G+ ++ GK+ +D
Sbjct: 234 AKYTVERPLHIGAALAGADQSLLDVCTAYALPIGEAFQLRDDLLGVFGDPSKTGKSTLDD 293
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
R GK T + A + +S + D + + ++R A E
Sbjct: 294 LREGKATALMAHALHTAGTEQARVLRSLVGDPDLDEAGAETVRGVLRATGAADKVEQMIT 353
Query: 289 SYGQKAKDSLR--CLPDSSWK 307
Q+A+ L PD K
Sbjct: 354 DRVQRARRVLDEAPFPDEVKK 374
>gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6);
farnesyltranstransferase [Arabidopsis thaliana]
gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 83/346 (23%), Positives = 139/346 (40%), Gaps = 64/346 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI---CSDVEM------IPDVVKYLIFSGGKRLRPMLTLA 52
+ +N + I + V + + ++Y + GGKR+RPML L
Sbjct: 30 SEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLV 89
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
++ + + ACA+E IH A+L+ DD+ LRRGK V+G +TS+L
Sbjct: 90 ACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILAS 149
Query: 111 DFLLSQAFCMVIETKS----------QEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+ L S A + + S A ++ L G+ L+ + E+D
Sbjct: 150 NALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDD 209
Query: 161 YLH----VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
L + KTAVL AA V +++ G + + LKSY +G+ FQ++DDVLD
Sbjct: 210 ELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETK 269
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E+GK G+D GK T P ++
Sbjct: 270 SSEELGKTAGKDLITGKLTYPKVM------------------------------------ 293
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A ++A++ L+ DS L+ + D+ ++R N
Sbjct: 294 --GVDNAREYAKRLNREAQEHLQGF-DSDKVVPLLSLADYIVKRQN 336
>gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 111/307 (36%), Gaps = 52/307 (16%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85
E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+H +
Sbjct: 29 ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVHDDLPAM 88
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-------- 137
DD LRRG+ + ++L GD L S AF + + + AL L
Sbjct: 89 DDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAEHNPQDAALRLRMFAVLARAA 148
Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+ G+ L + L A++ ++ + +L
Sbjct: 149 GPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 208
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
Y +G+AFQ+ DD+LD + +GK+ G D KPT P
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYP------------------ 250
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ + + A +A +LR + L E+
Sbjct: 251 ----------------ALL----GMAAAKAYALELRDQALHALRPFD--FAAEPLRELAR 288
Query: 316 FCLQRLN 322
+ ++R N
Sbjct: 289 YIVERRN 295
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
Length = 292
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 78/330 (23%), Positives = 132/330 (40%), Gaps = 50/330 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M L + E V+ + RI + + + + Y +GGKRLRP+L +A A +
Sbjct: 1 MMDLSTYLKERSELVDGFLKIRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAADAVGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+G + + LA A+E IHT +L+HDD+ + RRG++ V+G +VL GD LL+QA
Sbjct: 61 KGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ E K + + ++ ++ + + + ++KT
Sbjct: 121 FEVMTEQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQLHEAKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AA+ +L+ G AL + G+AFQ+ DD+LD G+ MGK G D +
Sbjct: 181 ALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSKIMGKMAGMDEK 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T + L + A
Sbjct: 241 MHKSTYVSLFT--------------------------------------LEGAKAMALDT 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KA+ +L + L+ + R
Sbjct: 263 LKKAELTLEPF--GERAEPLLAIARHLYNR 290
>gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
Length = 302
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/332 (18%), Positives = 116/332 (34%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L LT ++ + + S + ++Y SGGKR+RP+L A +
Sbjct: 11 ALNQLTDTAKARLEQALDHYLPAHSAASRLSHAMRYAALSGGKRIRPLLVYGAAQLAGAP 70
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+H +DD LRRG+ + T++L GD L ++AF
Sbjct: 71 LAKADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQPTCHKAFDEATAILAGDTLHTRAF 130
Query: 119 CMVIETKSQE--------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + +A G+++ +
Sbjct: 131 ELLACHGDYRDGSRISLIQHLCQAAGVDGMAAGQMQDMLAQGQQQTVAALEEMHYLKTGR 190
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ ++ + S+ L +G +G+AFQ+ DD+LD ++GK G D +
Sbjct: 191 LITASLQLGYFVAEKDDPSLLANLTEFGDAIGLAFQIQDDILDVTAATEQLGKPSGSDEK 250
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L ++ RA
Sbjct: 251 LQKSTFPSLL--------------------------------------GLEQSQQRARQL 272
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L ++ + + R +
Sbjct: 273 CDQAQQTLAGY--GPRALPLQQLAQYIITRNH 302
>gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
Length = 296
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 125/333 (37%), Gaps = 55/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + ++++ L+L++I + + +++ + GGKR+RP L AT ML+
Sbjct: 2 SLQTFSQHYRQRIDDLLLQKIETLPDLSPRLKAAMRHGLVLGGKRVRPFLVYATGSMLDI 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A AIE IH +L+H +DD LRRG + T+VL GD L + A
Sbjct: 62 DEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + +AL + + G+ L+ E L
Sbjct: 122 FSILADHPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHRHK 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ A + + V ALK Y +G+AFQ+ DD+LD + +GK G
Sbjct: 182 TGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSDTETLGKPQGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ L A
Sbjct: 242 DQALDKSTYP----------------------------------ALL----GLDAAREMA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A +L LP + + L D+ ++R
Sbjct: 264 QDLHRQALAALAPLPYN--TEILSAFADYIIER 294
>gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_APKG6D3]
Length = 283
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 49/318 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + ++K+N ++ + ++ E + +KY + GGKR+RP++ L + +
Sbjct: 8 INPLLEKYSAYIKKINNVLDSELELYTESEF-KEPLKYAL-GGGKRIRPIILLLASECVG 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
DN + ACAIEF+HT +++HDD++D+ LRR K + +G TSVL GDF+L
Sbjct: 66 EIDDNTLAAACAIEFLHTESVIHDDIIDNETLRRQKDPFHIKYGYNTSVLTGDFVLGLIL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ A ++EGE+ + L + DVT +DYL VI+ KTA F A
Sbjct: 126 NIASRINNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIEYKTATAFETASR 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++I+G ++L YG N+GIA+Q+ DD+LD++ E I +
Sbjct: 186 LGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLDWQNEDKLFNLLIKKSLDPR------ 239
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
D E Y +A S+
Sbjct: 240 ---------------------------------------NVFNDMEELLKKYTDRAVFSI 260
Query: 299 RCLPDSSWKKSLMEVVDF 316
R + DS K +L +V F
Sbjct: 261 RKIKDSQAKNNLENLVRF 278
>gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1]
gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
Length = 307
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/337 (22%), Positives = 123/337 (36%), Gaps = 56/337 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
++ LE E+ + + + I + ++Y + GGKR+RP+L AT L
Sbjct: 10 LEALEAALPPLRERAERALEAALPAADAHPTGIHEAMRYAVLGGGKRMRPILVYATGQAL 69
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ G ACA+E IH +L+H +DD LRRG+ + T++LVGD L +
Sbjct: 70 DHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILVGDALQA 129
Query: 116 QAFC-----------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+AF A + + + G+ L+ E
Sbjct: 130 RAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAAELEDMH 189
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
I A++ ++ + + AL Y +G+AFQ+ DDVLD G+ + +GK
Sbjct: 190 IHKTGALIRASVQLGALASGPTCAATLNALDRYAKCVGLAFQIHDDVLDVEGDADALGKE 249
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G D KPT P IL L +
Sbjct: 250 QGADAARDKPTYPSIL--------------------------------------GLRQSR 271
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A A D+L L L + +C+QR
Sbjct: 272 ELAERLAGDAIDALADL--GPGADVLRGLAAYCIQRQ 306
>gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio brasiliensis LMG 20546]
gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio brasiliensis LMG 20546]
Length = 294
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 119/323 (36%), Gaps = 57/323 (17%)
Query: 16 NFLILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
N + + S ++ +I + ++Y + GGKR RP L T ML + ++ A A+
Sbjct: 13 NQQLDNWLQSLPHQNLPLI-EAMRYGLLLGGKRARPFLVYITGQMLGCKLEDLDTPASAV 71
Query: 72 EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------C 119
E IH +L+HDD+ LRRG+ + + T++L GD L + AF
Sbjct: 72 ECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTILADGQLNPE 131
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + A + G+ L+ +E A++ SA
Sbjct: 132 AENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQELEEIHRNKTGALMKSAIRLG 191
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ V L Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 192 ALAAGEKGERVLPLLDQYADAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYP-- 249
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ L +A++ +A +L
Sbjct: 250 --------------------------------ALL----GLDGAINKAHTLLHEALQALE 273
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+P + + L E + ++R N
Sbjct: 274 AIPYN--TELLEEFARYVIERKN 294
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 70/323 (21%), Positives = 130/323 (40%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ ++ + + ++Y+ GGKRLRP+L LA + + + +
Sbjct: 16 AQTELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ LRRGK + + T++LVGD L +QAF ++
Sbjct: 76 AIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPTGL 135
Query: 128 EALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A +++++ +A G+ L+ + A++ +AA+
Sbjct: 136 PAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLG 195
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + + L +Y LG+AFQ++DDVLD + +GK G+D N KPT +
Sbjct: 196 ALACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKL 255
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ L A + +A L
Sbjct: 256 M--------------------------------------GLQTARAYAETLTAEATALLE 277
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L ++ F R N
Sbjct: 278 PFGAKALR--LNQLAQFVTARKN 298
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 128/326 (39%), Gaps = 56/326 (17%)
Query: 13 EKVNFLILKRICSDV-------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+++ + + + + + ++Y GGKRLRP+L L + +
Sbjct: 33 KQIEMAMDTALSATPDVTRFVPPSLFESMRYSALGGGKRLRPVLVLLASEACGADPLQAM 92
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A+E IH +L+H +DD LRRG+ +V+G T++L GD LL++AF ++
Sbjct: 93 PAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDGLLTRAFEVLAT 152
Query: 124 TKSQEALEALSL-------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
S + L + C + G+ L+ T + + KT L + A
Sbjct: 153 EISNKELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQIHHRKTGRLLACA 212
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + G ++L YG +G+AFQ+ DD+LD G ++GK +D + GK T
Sbjct: 213 LTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEKLGKQTQKDAQAGKATY 272
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P L + + RA ++A
Sbjct: 273 PGFL--------------------------------------GVEASRERAADLVKQACR 294
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L ++ + ++R +
Sbjct: 295 ELEVF--GPRGQWLSDLALYIIERDH 318
>gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1]
Length = 297
Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/338 (17%), Positives = 104/338 (30%), Gaps = 57/338 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATAL 55
M ++ + + V + K E + + + Y + +GGKR+RP+L A
Sbjct: 1 MSDFKEKFSEYISLVEENLRKYNAHSPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAFCN 60
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL----VGD 111
L N A AIE IHT +L+HDD+ + + ++
Sbjct: 61 ALGGDTGNAAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGDAL 120
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+L E S E + ++ + + + +
Sbjct: 121 SVLPFGLIADDEKLSPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLRNMY 180
Query: 172 LFSAALEVSSLIAGVQNSVRQA-------LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+S K YG LG+AFQ++DD+LD E+GK
Sbjct: 181 RHKTGELISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILDVTSTTEELGKP 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G D K T + + +
Sbjct: 241 VGSDEEENKTTFVTLY--------------------------------------GVEKAQ 262
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + +A L D+S+ L ++ + L+R N
Sbjct: 263 EIAGNITDEAMRCLERFEDNSF---LRQLTEMLLKRKN 297
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 62/339 (18%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ M ++ + + + + + Y + +GGKR+RP+L +A
Sbjct: 4 RQPINQYMNEICDRLDSELTNLFPPSWKVPETLHKSMSYSLMAGGKRMRPLLVIAACEAG 63
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + +ACA+E +HT +L+H +DD RRGK V+G +++L GD LL+
Sbjct: 64 GGSRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLT 123
Query: 116 QAFCMVIETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF +I+ Q + A A + + +T + L I
Sbjct: 124 HAFYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIH 183
Query: 167 -SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
KT+ L +L IAG + ++L+ +G ++G+AFQ+ DD+LD G+ +++GK +
Sbjct: 184 LHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGDESKLGKPV 243
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + K T P + L +
Sbjct: 244 QSDVKQEKVTYPYFI--------------------------------------GLDPSRR 265
Query: 286 RAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+AK + D + L+E+ DF + R +
Sbjct: 266 EVERLTAEAKRVITEGNFND-PSR--LLEIADFLMARDH 301
>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 53/319 (16%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + I E I + Y + +GGKRLRP+L LA A ML+ D + CAI
Sbjct: 14 IEERLQNIIPEVNEYCLDIKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAI 73
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK V+G ++L GD LL+ A+ ++I +
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESK 133
Query: 130 LEALS--------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
G S+ + + + + KT L A +E ++
Sbjct: 134 SIDKMRAAGIVAKYAGSLGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAA 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + L Y NLG+AFQ+ DD+LD G V MGKN G D K T +
Sbjct: 194 VICGADKKEFELLSGYAANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMY- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L +++ + Q+ L
Sbjct: 253 -------------------------------------GLEESKKLLETVTQEGISCLEAF 275
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+++ + L E+ + R
Sbjct: 276 GNNA--QFLKELALSLVVR 292
>gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
Length = 305
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 50/325 (15%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ +D++ V ++L + + ++Y GGKR+RP+L +ATA ML D +
Sbjct: 19 NRIARDIDAVFDVLLPVPDDTRAPLVEAMRYSAMDGGKRVRPLLVVATAEMLGVSRDPAL 78
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ CA+E IH +L+HDD +DD LRRGK + T+VL GD L + AF ++ +
Sbjct: 79 RVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSLHALAFEILTD 138
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--------EDYLHVIKSKTAVLFSA 175
++ + + TLA + + + KT L +A
Sbjct: 139 DETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQQLKTGALLAA 198
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++E+ +++A + R L++Y ++G+AFQ+ DD+LD G+ + GK + +D GK T
Sbjct: 199 SVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEKAGKALRKDDEQGKQT 258
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
++ + +A + A
Sbjct: 259 FVTLM--------------------------------------GVEGARNQARALVDHAV 280
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
L + + L + + ++R
Sbjct: 281 GHLGQYGEDAA--VLRALARYIVER 303
>gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 304
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ + +V + + + + + Y + +GGKRLRP+L L TA +
Sbjct: 10 QAMKQRLAAEALEVEAYLGGCLKGRGIPCDLLKAMDYSLLAGGKRLRPVLCLTTAGLFGL 69
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + A AIE IHT +L+H +DD LRRG + +G T++L GD LL++A
Sbjct: 70 ARDAVLPFAAAIELIHTYSLVHDDLPAMDDDDLRRGMPSNHKKFGEATAILAGDGLLTEA 129
Query: 118 FCMV---------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
FC++ S ++ A + A + G++ + + DV+ + + K
Sbjct: 130 FCLMASAGAAVEASRVLSALSVVAAAAGAGGMVGGQMLDMEYTGRADVSLDMLRGMHAMK 189
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + +L+AG + + + YG +G AFQ+VDD+LD G+ +GK +G D
Sbjct: 190 TGALIRCSCLAGALLAGAPHEDAERISHYGEAIGAAFQIVDDILDETGDEATLGKPVGSD 249
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T P +L L + A
Sbjct: 250 SGQGKNTYPSLL--------------------------------------GLERSRELAQ 271
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A L + L + + R
Sbjct: 272 QQVDAAVACLSGY-EGENALFLRALAQYIADR 302
>gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
Length = 298
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 121/326 (37%), Gaps = 53/326 (16%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++E +N K I + + D +KY + GGKR RP L TA ML ++ A
Sbjct: 14 QRNIEHLNQWFEK-IEIQQQPLTDAMKYALLLGGKRARPYLVYITANMLGIDSEHADAPA 72
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH+ +L+HDD+ +D+ LRRG + + T++L GD L + AF +
Sbjct: 73 AAVECIHSYSLIHDDLPAMDNDDLRRGHATCHIKFDEATAILAGDALQTLAFEILANGTL 132
Query: 121 ----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + + A + G+ L A++ SA
Sbjct: 133 AEEAESSRIDMIRVLSKASGASGMCMGQSLDLQAEGKQVDLLSLEQIHANKTGALMKSAI 192
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + L+ Y +G+AFQ+ DD+LD + +GK G D K T
Sbjct: 193 QLGALCAGEKGKQILPQLEKYADAIGLAFQVQDDILDITSDTETLGKPQGSDIALEKSTY 252
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P +L L + +A Q A
Sbjct: 253 PALL--------------------------------------GLDGAKLKAEQLYQTAIT 274
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L +P + ++ + ++R N
Sbjct: 275 ALDDIPYN--TDAMQAFAQYVIERKN 298
>gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
Length = 377
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 26/345 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTL 51
+ L + V ++ + + V Y GGK +RP L L
Sbjct: 32 DVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALAL 91
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+A + + V A A+E +H +LLHDD++D RR + V G ++LVGD
Sbjct: 92 ISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGD 151
Query: 112 FLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
L + A + + ++ A L+ L +G+ + +S VT E+ L + +K
Sbjct: 152 ALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVTVEECLEMEGNK 211
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ GK D
Sbjct: 212 TGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSD 271
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF----------IIMREN 277
R K +LPV+ A G + D + +++ + ++ E
Sbjct: 272 LRQRKKSLPVVAALAAGGPASDKLAQLLAADAAATGPDSVPQEEFSEEEFAARAALIEEA 331
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
T A A +L +P + S + + DF + R
Sbjct: 332 GGREWTSQEARRQFDIAIGALDSVPMPPHVRASFVALADFVVVRK 376
>gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 386
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 26/345 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTL 51
+ L + V ++ + + V Y GGK +RP L L
Sbjct: 41 DVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALAL 100
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+A + + V A A+E +H +LLHDD++D RR + V G ++LVGD
Sbjct: 101 ISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGD 160
Query: 112 FLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
L + A + + ++ A L+ L +G+ + +S VT E+ L + +K
Sbjct: 161 ALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVTVEECLEMEGNK 220
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ GK D
Sbjct: 221 TGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSD 280
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF----------IIMREN 277
R K +LPV+ A G + D + +++ + ++ E
Sbjct: 281 LRQRKKSLPVVAALAAGGPASDKLAQLLAADAAATGPDSVPQEEFSEEEFAARAALIEEA 340
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
T A A +L +P + S + + DF + R
Sbjct: 341 GGREWTSQEARRQFDIAIGALDSVPMPPHVRASFVALADFVVVRK 385
>gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_ANIW141M18]
Length = 283
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 49/318 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + ++K+N ++ + ++ E + +KY + GGKR+RP++ L ++ +
Sbjct: 8 INPLLEKYSAYIKKINNVLDSELELYTESEF-KEPLKYALD-GGKRIRPIILLLSSECVG 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
DN + ACAIEF+HT +++HDD++D+ LRR K + +G SVL GDF+L
Sbjct: 66 EIDDNTLAAACAIEFLHTESVIHDDIIDNETLRRQKDPFHIKYGYNISVLTGDFVLGLIL 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L+ A ++EGE+ + L + DVT +DYL VI+ KTA F A
Sbjct: 126 NIASRINNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIEYKTATAFETASR 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++I+ ++L YG N+GIA+Q+ DD+LD++ E I +
Sbjct: 186 LGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLDWQNEDKLFNLLIKKSSDPR------ 239
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
D E Y +A S+
Sbjct: 240 ---------------------------------------NVFNDMEELLKKYTDRAVFSI 260
Query: 299 RCLPDSSWKKSLMEVVDF 316
R + DS K +L +V F
Sbjct: 261 RKIKDSQAKNNLENLVRF 278
>gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi]
Length = 363
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 129/319 (40%), Gaps = 29/319 (9%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---------------------EYRGD 62
S+ ++ + KY+ GK LRP L A L
Sbjct: 52 NSNNAVLNHIAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDEISSGAIR 111
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ L E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A +
Sbjct: 112 PFLRLGEITELLHTATLVHDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIA 171
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + +S LA GE+ Q+ +++ E+ S A ++ ++ L
Sbjct: 172 ALGNSRVVLLMSTALEDLAAGEMMQMDGCFDIESYEQKSYCKTASLIANSLASTAVLAGL 231
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+
Sbjct: 232 PNTAYEE---AAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVL--- 285
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
RE+ + + + + + + + + A + ++ ++L L
Sbjct: 286 --LAAREETRVYEAVRRRFKNPGDTEMCMEAVERHGCVAEALEHAGEHCRRGVEALHALH 343
Query: 303 DSSWKKSLMEVVDFCLQRL 321
S + L + L R
Sbjct: 344 TSPARDCLEAAMGLILTRQ 362
>gi|296198925|ref|XP_002747055.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1
[Callithrix jacchus]
Length = 400
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/347 (15%), Positives = 118/347 (34%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSQNSLQ-----LRGLVVLLISKA 122
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSGNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNINELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + D
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKEDYITDD 242
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 243 IGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDLQPFT 302
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + V+ G + G++ L ++
Sbjct: 303 KEKTNDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIREAQEKGRLDYGKL---RERIK 354
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 400
>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 293
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 73/323 (22%), Positives = 127/323 (39%), Gaps = 52/323 (16%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + ++Y + GGKR+RP+L A + R + A
Sbjct: 11 LERVETALEHYLPAETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------ 120
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVVLTSDVL 130
Query: 121 -VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V + S AL+ + + G+ L+ + + A+L +A
Sbjct: 131 GVPQQASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMHRMKTGALLRAAVRMG 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +L +Y +G+AFQ+VDD+LD + +GK G+D ++GKPT
Sbjct: 191 ALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
I+ L + A A +L
Sbjct: 248 -------------------------------VSII----GLDASRSLAAQLRSDAHAALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 PF--GARAQRLAELADLVVNRVS 293
>gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
NRC-1]
gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Halobacterium salinarum R1]
gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
NRC-1]
gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase
[Halobacterium salinarum R1]
Length = 300
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/338 (21%), Positives = 129/338 (38%), Gaps = 64/338 (18%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---- 60
+ + I + + + + D +++++ +GGKR+RP LT+
Sbjct: 2 EYVEARRAAIEQRITEAVGGVEPTELGDQLEHVVLAGGKRVRPTLTVLVCEAAGGAVWTG 61
Query: 61 ----------------GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
G++ + A +E +H A+L+ DD++D S LRRG +A +G
Sbjct: 62 AAEAAAVRENAALSAGGEDALDYAVGVELVHNASLVVDDIIDRSELRRGSASAWAEYGYG 121
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
++ D LL +AF + S L E + TE +Y+ +
Sbjct: 122 PGIVASDGLLGEAFALFSRDPRAMECVTDS-----LVELGEGEAIELVARPETEREYMEL 176
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ KT LF AA E+ ++ A + Y +G+AFQ+ DDVLD + + +GK
Sbjct: 177 ARRKTGALFRAAAELGAIAADADGRAVERFGEYAERVGVAFQIRDDVLDATADSDALGKP 236
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G D +P++ + S + L +
Sbjct: 237 AGVDEALDRPSIVQVT--------------------DRSPDALNR--------------- 261
Query: 285 YRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
A ++A +L LPD K L + +F ++R
Sbjct: 262 -LAGEQSERALGALAELELPDGEAKDYLQYLAEFVVER 298
>gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio sinaloensis DSM 21326]
gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio sinaloensis DSM 21326]
Length = 294
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/333 (19%), Positives = 121/333 (36%), Gaps = 53/333 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L L ++ ++ + + + + + ++Y + GGKR RP L T ML
Sbjct: 3 EALTSLQQRNNAQLEAWL-NTLPHQQQPLIEAMRYGLLLGGKRARPFLVYITGQMLGCTL 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF
Sbjct: 62 EELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFT 121
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + +A + + G+ L+ +E
Sbjct: 122 ILADGHLNPDAQAQRIKMVKALAEASGAAGMCMGQALDLAAENRDVSLQELEEIHRNKTG 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ A + V L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 182 ALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQ 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ L +A++
Sbjct: 242 ELNKSTYP----------------------------------ALL----GLEGAVNKAHT 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L +P + + L E + ++R N
Sbjct: 264 LLNEALQALSAIPYN--TELLEEFARYVIERKN 294
>gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
Length = 296
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
V + + + E + + ++Y + +GGKRLRP+L L A ML + + + A +
Sbjct: 12 ADVEKYLGECLKGMGIPENLLESMEYSLMAGGKRLRPVLVLVWAQMLGVKKEAVMPFAAS 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IHT +L+H +DD LRRGK + + T++L GD LL++AF + + +
Sbjct: 72 LEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDGLLTEAFGFMAKADAPA 131
Query: 129 ALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + G++ +S + VT ++ + KT L +A + +
Sbjct: 132 EYVVEAISLMAKSAGSPGMVGGQVVDMSYTGRDGVTLDELKVMHSMKTGALILSACKSGA 191
Query: 182 LIAG---VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++A + + YG +G+AFQ+VDDVLD G+ +GK +G D GK T P
Sbjct: 192 ILAKGAGASEDDVRRAEEYGRLIGVAFQIVDDVLDVVGDEATLGKPVGSDIEQGKSTYPS 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L +++ A Y +A + L
Sbjct: 252 LI--------------------------------------GLDESKELARKYVDEAVELL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ L E+ + + R+
Sbjct: 274 SPY-SGEEAEFLAELARYIVDRV 295
>gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 296
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 68/334 (20%), Positives = 119/334 (35%), Gaps = 55/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ +V + + + +D + + D ++Y GGKR RP L + +A +
Sbjct: 2 TFTERLEDHASRVERHLDEWLSTDKLGAVPDRLLDAMRYGTLGGGKRFRPFLVIESAALF 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A+E IH +L+HDD+ +D+ LRRG+ + + T++L GD LL+
Sbjct: 62 GVPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDTLLT 121
Query: 116 QAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF ++ + G ++ + E D +
Sbjct: 122 VAFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTLQAM 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + ++ + ALK+YG LG AFQL DD+LD G+ +GK G+
Sbjct: 182 KTGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGDAAVVGKATGK 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T ++ L +
Sbjct: 242 DQEAGKGT----------------------------------LVSLL----GLEAAHAKL 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +A +L L +F + R
Sbjct: 264 QNLKAEALGALAPFKGRDA--MLAGAAEFVVARK 295
>gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
Length = 365
Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 122/363 (33%), Gaps = 43/363 (11%)
Query: 1 MKMLEDLTLKDMEKVNFLILK----------RICSDVEMIPDVVKYLIFSGGKRLRPMLT 50
M+ DL ++ V + + + + IP + + GGKR+R L
Sbjct: 1 MEEFSDLLNYSVKIVESRLREVFDALEKEASEVSPHLSSIPYIARDYTLRGGKRIRAFLA 60
Query: 51 LAT--ALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
L + D L +E + + L+HDD++D LRRG + + +
Sbjct: 61 LVGYWSKAWGTGDVDRVSKLMATLELLQSYLLVHDDIMDMDELRRGGPTVHVWFKEECLK 120
Query: 108 LVGDFLLSQ---------------------AFCMVIETKSQEALEALSLVACTLAEGELR 146
+ A + ++ + S +A G+
Sbjct: 121 TRVSSNCAHYGVSQAITVGDYLEATAVENLAMLKLPGEAFEKLITTYSRGLRKVAYGQYL 180
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS----YGMNLG 202
+ S + ++ K L A L + Y + G
Sbjct: 181 DVLYSSLPLARVGENDILVVHKLKTASYTVELPLHLGAIASLKYTDRLLNELSSYAIPAG 240
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--- 259
IAFQL DD++ G+ GK G D R K TL +I A+Q + ++ F + ++
Sbjct: 241 IAFQLRDDIIGLFGDPRTTGKPSGSDVRGKKKTLLIIKAYQLASSSDREFLEKVYDELPG 300
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDS-SWKKSLMEVVDFC 317
I+ ++++ I+ +L +A + + + K+ L +++
Sbjct: 301 DSITDRDIQRVREIVESTGSLDYNLKLIDELVSQAMREIESAVEINRETKEVLTWLLNKL 360
Query: 318 LQR 320
R
Sbjct: 361 AYR 363
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 294
Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 74/246 (30%), Positives = 129/246 (52%), Gaps = 13/246 (5%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D V+ + + + + I + ++Y +F+GGKRLRP+LT+A A +
Sbjct: 4 QDQLKSYALAVDKALNEYLPAAEVYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVGGSM 63
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + +ACA+E IHT +L+HDD+ +D+ RRG+ V+G ++LVGD LL+QAF
Sbjct: 64 EQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQAFE 123
Query: 120 MV--------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ + +Q LE G +LS++ + + ++ + KT
Sbjct: 124 VIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHKTGA 183
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
LF A+ ++++G AL +Y +G+AFQ+ DD+LD G+ ++GK +G D +N
Sbjct: 184 LFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVKN 243
Query: 232 GKPTLP 237
K T P
Sbjct: 244 KKATYP 249
>gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
Length = 295
Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/331 (19%), Positives = 117/331 (35%), Gaps = 52/331 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L + V+ + I + + ++Y +F+GGKRLRP+L +A
Sbjct: 3 RELREFWEAGARAVDDALDALIPPGKGAGRLHEAMRYSLFAGGKRLRPLLAMAACEGAGG 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LVG 110
+ ACA+E +HT +L+HDD+ + ++ +
Sbjct: 63 SLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLA 122
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV-IKSKT 169
+L++A A + + G+ + + + + L + KT
Sbjct: 123 FGVLAKAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLHRKKT 182
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+L + L AG S+ L +YG +G+A+Q+VDD+LD G+ +GK +G D
Sbjct: 183 GALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGDARRIGKAVGRDA 242
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P + + +
Sbjct: 243 ALNKLTWPGVY--------------------------------------GVDRSREDVRR 264
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A L LP + L ++ + R
Sbjct: 265 LTKEAIAHLHGLPG--DTRHLADLARYLADR 293
>gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13]
Length = 297
Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 56/327 (17%)
Query: 9 LKDMEKVNFLILKRICSDVE-----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
D+E + + + E + + ++Y + +GGKR+RP+L LA
Sbjct: 10 ESDIEWIERELQHCCRTKPETNPQAKVLEAMRYSLEAGGKRIRPLLVLAFCRACGGDVQK 69
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-- 119
+ A AIE IHT +L+H +DD RRG+++ + T++L GD L F
Sbjct: 70 ALKPALAIEMIHTYSLIHDDLPAMDDDDYRRGRLSCHKAFDEATAILAGDALNVLPFELL 129
Query: 120 ------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
S A A + A + G++ ++ DV + + +++ KT L
Sbjct: 130 STDTTLPAETRVSLIAELANAAGAEGMIGGQVIDIANETRTDVDQNNLVNMYAHKTGALI 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A + ++AG + + A Y LG+AFQ+VDD+LD G +GK IG D + K
Sbjct: 190 RVACTMGCMVAGANDKMLTAATEYAQRLGLAFQIVDDILDVTGTPELLGKPIGSDAAHHK 249
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L L + A ++
Sbjct: 250 TTFVTLL--------------------------------------GLEGAKAEASRLTEE 271
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A L +P+ + L ++ + L R
Sbjct: 272 ALRLLEDIPEH---QFLTDLTEALLNR 295
>gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi]
gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
Length = 363
Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 128/319 (40%), Gaps = 29/319 (9%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---------------------EYRGD 62
S+ ++ + KY+ GK LRP L A L
Sbjct: 52 NSNNAVLNHIAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDISSGAIR 111
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ L E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A +
Sbjct: 112 PFLRLGEITELLHTATLVHDDVMDNSNTRRGQPTVHCLYDTKRAVLAGDFLLARASIWIA 171
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ +S LA GE+ Q+ +++ E+ S A ++ ++ L
Sbjct: 172 ALGHSRVVLLMSTALEDLAAGEMMQMDGCFDIESYEQKSYCKTASLIANSLASTAVLAGL 231
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+
Sbjct: 232 PNTAYEE---AAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVL--- 285
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
RE+ + + + + + + + + A + ++ ++L L
Sbjct: 286 --LAAREETRVYEAVRRRFKNPGDTEMCMEAVERHGCVAEALEHAGEHCRRGVEALHALH 343
Query: 303 DSSWKKSLMEVVDFCLQRL 321
S + L + L R
Sbjct: 344 TSPARDCLEAAMGLILTRQ 362
>gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
Length = 295
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 65/324 (20%), Positives = 116/324 (35%), Gaps = 55/324 (16%)
Query: 14 KVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V+ + ++E + ++Y + +GGKR+RP+L A L + ACA
Sbjct: 12 RVDAALEPLFVAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--- 125
+E IH +L+H +DD LRRG+ + ++L GD L S AF +++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPHLSP 131
Query: 126 -------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A + + G+ L A++ ++
Sbjct: 132 QADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ A AL++Y +G+AFQ+ DD+LD G+ +GK G D KPT P
Sbjct: 192 GALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + A +A +L
Sbjct: 251 ---------------------------------ALL----GLDAAKAYAIELRDQALVAL 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ L + + ++R N
Sbjct: 274 EGF--GEKAEPLRALARYIVERRN 295
>gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
Length = 323
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 9/311 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+V + + +++ + I +GGKRLRP+L L A D + A A+
Sbjct: 22 MERVEQRLTELTAGHGQLLAEHAGTTIAAGGKRLRPLLVLLAAGESAAPTDRLIRSAVAV 81
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH+A+L+HDDV+D + +RRG+ G + GD L S+AF + + +
Sbjct: 82 ELIHSASLVHDDVLDRAPVRRGRPTVFAAAGRTVATATGDLLFSRAFAELAASGEAADVR 141
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
ALS + LA GEL Q + + ++ V+ + YL + KT LF AA + +
Sbjct: 142 ALSGASSALAAGELMQRADAWDVGVSLDRYLERCELKTGALFEAACRLGA---LATAGPD 198
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL ++G +G+AFQL+DDVLD G + GK G D +G TLP+I+A +R
Sbjct: 199 EALAAFGRRIGLAFQLLDDVLDVSGPASRTGKARGTDLLDGTVTLPLIIARERDPALAAT 258
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ + E + + AL D + RA + +AK L LP + +L
Sbjct: 259 DLRAL-----ATAEQAESICDRIAATGALSDAKERALAVVAEAKAGLPALPLRQ-QATLE 312
Query: 312 EVVDFCLQRLN 322
V D ++R +
Sbjct: 313 LVADGVVERYS 323
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +A+ + + + + + ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 282
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 131/331 (39%), Gaps = 61/331 (18%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+E ++ + + +I + ++Y +FSGGKRLRP+L ++ + +
Sbjct: 2 DFNQQLKHKIEIIDKNLDNMLPPADTYPPVIHEAMRYSVFSGGKRLRPVLLISAYELFDE 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D+ + LACAIEFIHT +L+H +DD RRGK V+G +VL GD LL+ A
Sbjct: 62 HVDDCMPLACAIEFIHTYSLIHDDLPAMDDDDTRRGKATCHKVFGEGIAVLTGDALLNHA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV------IKSKTAV 171
F ++++ ++ + +A A G + + E + + KTA
Sbjct: 122 FEVMLDDIARNPHHIAAAIAIAKAAGIGGMIGGQVMDLLYENKPVDDGVLQYIHQHKTAA 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L AA++ +L AG +A++ YG+ LG+AFQ+ DD+L
Sbjct: 182 LICAAVKAGALAAGADEVYVRAIEQYGLALGMAFQISDDIL------------------- 222
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ ++ + + A +
Sbjct: 223 -----------------------------DVDEGGKEEVKATYPALYGIEASIKAAQEFT 253
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A D++ L E+ + ++R N
Sbjct: 254 QHAIDAIAVFGQKG--TFLKEMASYMMRRSN 282
>gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Thiomonas sp. 3As]
Length = 326
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 65/328 (19%), Positives = 116/328 (35%), Gaps = 56/328 (17%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ LI + + + + + + + Y GGKR+RP+L A ++ AC
Sbjct: 37 ARAQQLIERFVPPEHPLVPQLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAAC 96
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H +L+HDD+ LRRG+ + +G ++L GD L + A+ ++
Sbjct: 97 AVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVRFGEALALLAGDALQALAYEVLTPEADI 156
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDV-----------TEEDYLHVIKSKTAVLFSAA 176
L A ++ + LD+ + +
Sbjct: 157 APALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMG 216
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
AL++YG +G+AFQ+VDD+LD + + +GK G+D + K T
Sbjct: 217 AACGGFDTAHPAQTYTALETYGDAVGLAFQVVDDILDVTADSHTLGKTAGKDAQQNKSTY 276
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
L L A+ KA+
Sbjct: 277 VSAL--------------------------------------GLDAARKLAHGLRDKAQA 298
Query: 297 SLRCLPDS--SWKKSLMEVVDFCLQRLN 322
+L LP + + L E+ D + R +
Sbjct: 299 ALDTLPPPQRAASQRLRELADLIVLREH 326
>gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
Length = 327
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
D+ +V LI + + S + + L K LRP + +A +
Sbjct: 9 IAPDVVRVRDLIREELGSPSGELSSALVDLASRDAKLLRPGCMVLSARFGVGEGEIPERV 68
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V LA A+E +H ATL+HDD+VDD+A RRG A +G + +VL+GD L ++A +V E
Sbjct: 69 VRLAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA---ALEVSS 181
S+E LS + +GE+ ++ + + L ++ A + +
Sbjct: 129 ASREHAVFLSRGVRHILDGEIEEVEVRRALGRESFSLRRYLRRILRKTGLLFVVAFHLGA 188
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG + V + L+ G N+G+AFQ++DDVLD G +GK +G D G P ++
Sbjct: 189 SEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG--RGLGKPVGRDVEQGVVGAPAVML 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ R + + G K ++ ++ A+ + A + +A L
Sbjct: 247 ARKEGDRLGVWMRRACAGGMAGRVWAGKVRRLLVDSGAVQEARGMAQGFTDRAMREAAGL 306
Query: 302 PDSSWKKSLME-VVDFCLQRL 321
P+ W++ L + + ++R+
Sbjct: 307 PEGRWREVLEGVLAELVVRRV 327
>gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Sat464]
Length = 307
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S++ K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELSSNI------------GPSKMLRSKLMLA---LLNGK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDTKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +A+ + + + + + ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKETKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 124/324 (38%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LERVETALGHYLPAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 SALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A +LV +A G+ L+ + A+L ++
Sbjct: 131 LPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +AL +Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A +L
Sbjct: 249 --------------------------------VSII----GLDASRALAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 EPF--GARAQRLAELADLVVNRVS 294
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+VN + + + + + ++Y + +GGKR+RP+L LA ++ + ACA+E
Sbjct: 91 RVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVE 150
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 151 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 200
>gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex]
Length = 302
Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 14/295 (4%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFIHTATLLHDDVV 85
Y GK LRP++ L A + +N +A E +H L HDDV+
Sbjct: 10 ASYHFDGDGKCLRPLVILCWAKAINFILKETSPKVIENQKKVAQVAEMVHGTCLYHDDVI 69
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DD+ RR K + G + S+ GDF+L +A + + + + L+ + + GEL
Sbjct: 70 DDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETISQISNNKVCILLTRMIQNVVTGEL 129
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
QL + Y+ KTA +F+ + ++AG +++ +G LGIA+
Sbjct: 130 MQLDAGATEEERFSQYIDKTFKKTASVFAYPCQAVLVLAGADATLQTTAFEFGRQLGIAY 189
Query: 206 QLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
QLVD + D+ E GK + D G +PV+ A Q+ + + G
Sbjct: 190 QLVDGITDFPAIASTEYGKELAVDLNQGLANMPVLFAAQQFPELNPMILRHFKEPG---- 245
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
++ A+ ++ ++ L TE A Y A D + LP S +++ L V L
Sbjct: 246 -DVATAYNLILKSDGLQRTEELAIQYYGDAMDKIAQLPQSPYQEMLFTVTHQLLN 299
>gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 117/321 (36%), Gaps = 54/321 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + + + + + Y + +GGKRLRP+L A A ACA
Sbjct: 15 RVNTRLEYWFAKQNTTAAKLSEAMHYAVMNGGKRLRPVLAFAAAEACGTDASLANDAACA 74
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E +H+ +L+HDD+ LRRG + + T++L GD L AF ++ ++
Sbjct: 75 LEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQCLAFEVLASSELPS 134
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD---------VTEEDYLHVIKSKTAVLFSAALEV 179
+ L ++ + + + KT L AA+ +
Sbjct: 135 MTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIHRLKTGCLIRAAVRL 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L A S AL Y LG+A+Q+ DD+LD G+ +GK G D K T P I
Sbjct: 195 GALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQGADAVLDKATYPRI 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + A +A +++
Sbjct: 255 L--------------------------------------GLQAAQALATHLHDQALQAIQ 276
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
D + L + + + R
Sbjct: 277 GFGDGA--TPLRALASYIVNR 295
>gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
Length = 280
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 44/318 (13%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+L + + +++ + + + + V++ +GGKR+RPM+T+ + ++
Sbjct: 2 ELLERRRALIEERLVEVVDDLEPDALRAEVEHTALAGGKRVRPMVTVLACETVGGTAEDA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V IE +H A+L+ DD++D S LRRG +A +G +++ D LL +AF +
Sbjct: 62 VDFGVGIELVHAASLVVDDIIDRSELRRGTTSAWAEFGYGPAIVSSDGLLGEAFALFSSD 121
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A +VA + E + + + TE +Y+ + + KT LF AA E+ ++ A
Sbjct: 122 PD-----ATRVVAEAMVELGIGEATELSAEPETEAEYMTLARRKTGALFRAAAELGAIAA 176
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G +AL Y +G+AFQ+ DDVLD + +E+GK G D +P++ +
Sbjct: 177 GSDAVTVEALGEYAERVGVAFQIRDDVLDAIADPDELGKPTGHDAALERPSVVQVTDLTP 236
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-- 302
+ RA + +A ++L +
Sbjct: 237 ------------------------------------DEANARARAESDRAIEALDRVEVA 260
Query: 303 DSSWKKSLMEVVDFCLQR 320
D + + L+E+ +F ++R
Sbjct: 261 DPTARNYLVELAEFVVER 278
>gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
Length = 292
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 55/330 (16%), Positives = 108/330 (32%), Gaps = 53/330 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
E L + +++ + + S E + ++Y + GGKR+RP+L A+ + +
Sbjct: 4 ETLFARWRDRIESELDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQL 63
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDF 112
++ A A+E IH +L+HDD+ +
Sbjct: 64 EHLDAAAMAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILAGDALQARAFG 123
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL+ A + A + A + G+ + + + KT L
Sbjct: 124 LLADAPLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALT-RMHALKTGAL 182
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA+ + +L L S+ LG+AFQ+ DD+LD ++GK G+D
Sbjct: 183 IRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQD 242
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P ++ + + + +
Sbjct: 243 KSTFP----------------------------------ALL----GMDGAKAQLHELAA 264
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L +L + ++R +
Sbjct: 265 RMQSLLAGY--GEEADALRALATLAVERDH 292
>gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
Length = 363
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 14/328 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62
L + + + + + + ++Y + GK++RP+L L A + G
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTG-LEYETYQRGKKIRPLLLLLAASLFRADGARRA 83
Query: 63 ----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ A ++E +H ATL+HDD++D + LRRG + G ++LVGD QA
Sbjct: 84 PLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGDLQFIQAI 143
Query: 119 CMVIETKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ +A A + E + R + +++ Y V KTAVL
Sbjct: 144 RVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVADRKTAVL 203
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F A E+ + ++G +AL YG +LGIAFQ++DDV D+ GK D
Sbjct: 204 FGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDFLHPQASAGKAPQADIAAR 263
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TLP+I A + + L +A + ++ LVD A +
Sbjct: 264 CLTLPIINAMEELGDAHELTRIMRGAIAAPEPAALDRAARAVERSQGLVDAYRAARRHAL 323
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A D L+ L D ++++ + + + R
Sbjct: 324 QAADCLQGLADRPERRAIESIASYVVDR 351
>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
Length = 293
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 126/321 (39%), Gaps = 53/321 (16%)
Query: 13 EKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ ++ + + + +++ GGKR+RP L A +L LA
Sbjct: 11 SRVDAVLAAHIDALPQTAPALKAAMRHGALIGGKRIRPFLVYAVGELLGVDKAKLDRLAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H +L+HDD+ LRRGK + + T++L GD L + AF ++ E+ +
Sbjct: 71 AVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDALQTLAFEIISESDAG 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAALEV 179
A +A + LA ++ ++ + KT L AA+E+
Sbjct: 131 LAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLHNLKTGALIRAAVEL 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + A ++ AL++Y +G+AFQ+ DD+LD E+GK G D K T P +
Sbjct: 191 ALIAADASDADTAALRAYADAIGLAFQVQDDILDITATTEEIGKPQGSDLDANKSTYPKL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L A + A +L
Sbjct: 251 L--------------------------------------GLDGARQTADALVADALSALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
+P +S + L + + + R
Sbjct: 273 KMPYNS--QLLADFARYIVAR 291
>gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
113480]
gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
113480]
Length = 488
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A +
Sbjct: 226 PSQRRLAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFI 285
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E L V L EGE QL + + +I K+A L S
Sbjct: 286 ARLRDPEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 345
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 346 KSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLA 405
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A+++ + + +G +++ A I+ ++ L T A Y A
Sbjct: 406 TSPLLFAWKQRPELGALVGRKFCREG-----DVQLARQIVSQSDGLDQTRALAQQYADDA 460
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ PDS K L+E+ + R
Sbjct: 461 VAAISKFPDSDAKDGLIEICRKTINR 486
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ K+++ + + + S ++ V KY S GK++RPML L +
Sbjct: 99 MVGKELKFLKKNLRSLLGSGHPILDQVAKYYAQSEGKQVRPMLVLLMSQA 148
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 54/308 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84
++I +KY +F+GGKR+RP+L + T M + ACAIE IHT +L+HDD+
Sbjct: 40 PDIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPA 99
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE------------A 132
+D+ LRRG+ V+G ++L GD LL+ A +E
Sbjct: 100 MDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLM 159
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + G+ L + + E+ +++ KT L +AA+ + +++AG +Q
Sbjct: 160 RAAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQ 219
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL++YG +G+AFQ+VDD+LD E +GK +G D K T +
Sbjct: 220 ALRNYGSAIGMAFQVVDDILDVESETAVLGKPVGSDAEESKTTFVSLF------------ 267
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
L + +A Y Q+A +L + + L E
Sbjct: 268 --------------------------GLESAKVKAEEYHQEAIAALAGIQRDTI--FLEE 299
Query: 313 VVDFCLQR 320
+ DF +R
Sbjct: 300 MADFICRR 307
>gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08]
Length = 365
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 66/358 (18%), Positives = 126/358 (35%), Gaps = 43/358 (12%)
Query: 5 EDLTLKDM-EKVNFLI----------LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA- 52
D + +N I + I +++ + D + GGKRLRP
Sbjct: 7 YSPVSADFRDSINARISSFLDNERRGIDAIGTELSPVLDAARDYT-GGGKRLRPAFCYWG 65
Query: 53 --TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV--- 107
A + A ++EF+H + L+HDD++D S RRG +A +
Sbjct: 66 HVAAAGQPVAPSGLLQAAGSLEFLHVSALVHDDLIDHSNTRRGLPSAHRRFEAAHVTAHG 125
Query: 108 --------------------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GEL 145
+ + + A + L T +
Sbjct: 126 DGSAEQFGFDVAILLGDLLLMWSSQMFTSAPVEADRLAAAIPLFDAMRTEVTCGQVLDVT 185
Query: 146 RQLSLSKNLDVTEEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
Q ++ + + D + + + ++ +AG + ++Q + +G +G
Sbjct: 186 SQSGMAGSDSESALDLVGRVVEYKCASYTVVRPSQIGVALAGGSSRLQQTMADFGSPIGR 245
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ DD+L G+ GK G+D R GK T+ V A + + KS + +
Sbjct: 246 AFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHALNQADSGDAARLKSLLGRPDLD 305
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
+++ A I+ + A E +A +L + + +L E+ C++R
Sbjct: 306 DDDVAIARRIIETSGARDAVESTIEQCHDRAVAALDDAEMTDAGRVALRELAHQCVER 363
>gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
Length = 312
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 71/341 (20%), Positives = 116/341 (34%), Gaps = 62/341 (18%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE--------MIPDVVKYLIFSGGKRLRPMLTLATA 54
L L+ + + E + + ++Y +GGKRLRP L +A+A
Sbjct: 13 DFSKLLDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASA 72
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDF 112
+ + ++ A+E IH +L+HDD+ LRRG+ + + T++L GD
Sbjct: 73 AIFNVPREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDS 132
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYL 162
LL+ AF ++ + L+ LA + D
Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KT L +L+ AL +YG G AFQ+ DD+LD G+ +G
Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGDAAALG 252
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T L +
Sbjct: 253 KPAGQDAALGKTTFVTQL--------------------------------------GIDG 274
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQRLN 322
+ R +A +L K +L F +R N
Sbjct: 275 AKRRLQDLLSQADAALAPFG---AKGDTLRAAARFVAERQN 312
>gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4]
gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4]
Length = 293
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 125/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + + ++V+ + I + + +++ GGKR+RP L A ML
Sbjct: 1 MLNEAITRYQQRVDGQLRHFINAQDDTEPQLKAAMEHGALIGGKRIRPFLVYAVGEMLGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 PLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKT 169
F ++ + + + + LA+ + + KT
Sbjct: 121 FEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLHRLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+E+ + A V + L ++ +G+AFQ+ DDVLD E+GK G D
Sbjct: 181 GALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGKPQGSDC 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A S
Sbjct: 241 ESNKSTYPKLL--------------------------------------GLSGAQATAKS 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A +L LP +S + + E F ++R
Sbjct: 263 LIEDALSALAKLPYNS--QLIAEFARFIIER 291
>gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c]
gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c]
Length = 296
Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 70/325 (21%), Positives = 122/325 (37%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ V+ L+ + + + + ++Y + GGKR+RP L A L + A
Sbjct: 12 QHVDALLQAQIGKLGDHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGIEQSDLDAPAL 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG + + ++L GD L + AF +++
Sbjct: 72 ALECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFEIIVNYPLS 131
Query: 128 EALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + + G+ L+ + L + L K A++ +A
Sbjct: 132 DFANAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSKKTGALITAAVK 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
S L V + + L+ Y +G+AFQ+ DD+LD G+ +GK G D K T P
Sbjct: 192 MASVLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLGKPQGSDQEQNKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + Q+A +
Sbjct: 252 ----------------------------------ALL----GLEGAQGYLAQLHQEALQA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP + + L DF + R +
Sbjct: 274 LDALPYN--TQVLKSFTDFVIHRNH 296
>gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
Length = 311
Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 26/315 (8%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L K++ +++ + + +++ Y++ + GKR+RP++ + +A L +
Sbjct: 10 LINKELAA----LVRDLP--DSPLGEILSYVLSAPGKRVRPLILILSAEALGTPPAQSIS 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A AIE +H A+L+HDD++D RRG +A +G + S+L GD+L+S++ ++ S
Sbjct: 64 AALAIELVHAASLVHDDILDHGIERRGSPSALERFGPEASLLAGDWLISRSIDLIS-GYS 122
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
Q + A S ++EGEL LS + + EDY I KTA LFSA+ ++ LI+G
Sbjct: 123 QPVIRAFSRACMDMSEGELMDLSCAG----SPEDYYQCITRKTASLFSASAKIGGLISGA 178
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L+SYG++LG+ +Q++DD+ +G + G+ + TLP I A +
Sbjct: 179 GEEDVARLESYGLHLGLGYQVLDDL------EEFLGLDQGKSSQKTSVTLPKIYASRSSR 232
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ D + + + + +AK +L+ L
Sbjct: 233 SASHDTDSDAGFDADSDIGS--------DTANVVQMCIKVTDDHCNQAKSALQALNGDEE 284
Query: 307 KKS-LMEVVDFCLQR 320
KK L E+VD R
Sbjct: 285 KKLQLREIVDEMTCR 299
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
Length = 300
Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 55/327 (16%)
Query: 9 LKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + ++ ++ + + ++I + ++Y + +GGKRLRPML T+ + +
Sbjct: 12 KRKVAEIEEILKEYLPKPEGYQKVIMEAMEYSLMAGGKRLRPMLMRETSRLFGDETEALC 71
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A+E IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF
Sbjct: 72 PFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFR 131
Query: 124 TKSQEALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
E+L + G V ++ + + KT L
Sbjct: 132 AFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVPKDVLDTIYELKTGALI 191
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A+ + +++ G + + ++ +GIAFQ+ DD+LD +GK I D +N K
Sbjct: 192 ECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDVTSTEEVLGKPIHSDEKNQK 251
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L + + R +
Sbjct: 252 TTYVTLL--------------------------------------GIEQAQKRVEELSNQ 273
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A D L L S + L +++ + R
Sbjct: 274 AIDLLHQL--SGENEYLEQLLIQLIHR 298
>gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 297
Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 133/336 (39%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D + + ++ ++ + + + + + + + +GGKRLRPML T M
Sbjct: 2 NFKDEMKQKVAQIEIILDEYLPAQEGLQKTVLTAMNTTVKAGGKRLRPMLINETYQMFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+GD AIE IHT +L+HDD+ D+ RRG+ +V+G ++L GD LL+ A
Sbjct: 62 KGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-----------LDVTEEDYLHVIK 166
+ + + + + V + + ++ E L + K
Sbjct: 122 YEVATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQILFIHK 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+KT+ L A + + +++AG ++ G +G+AFQ+ DD+LD G+ E+GK +G
Sbjct: 182 NKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEEEIGKPVG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D +N K T + + L ++
Sbjct: 242 SDEKNHKTTYVTL--------------------------------------KGLERSQRD 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA D L L + F + R +
Sbjct: 264 VEDISKKAIDILEKYDKGDC--YLTNLTRFLIHRTH 297
>gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
PHSC20C1]
gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
PHSC20C1]
Length = 372
Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 68/368 (18%), Positives = 122/368 (33%), Gaps = 49/368 (13%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY---LIFSGGKRLRPMLTLATALMLE 58
L DL +++ + S + + + SGGKR R + +
Sbjct: 5 NQLVDLVQLKIDEFLAEKQSELNSIAPELT-AMTDVGGSLLSGGKRFRALFCYWGWQAVA 63
Query: 59 YRGDNHVLLACAI---------------EFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ L + E H A L+HDD++D S RRG +A +
Sbjct: 64 GLPSSTGPLDSEVKSEELPGVLLSASALELFHAAALVHDDIMDRSDTRRGSPSAHRRFEQ 123
Query: 104 Q-----TSVLVGDFLLSQAFCMVIETKSQ----------------------EALEALSLV 136
+ + S A + E + + V
Sbjct: 124 MHRDGAWTGNAETYGQSAALLLGDLLLGWSDELLGRGLAMLPRPAALAARREFMTMRTEV 183
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHV--IKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ + + + D I A L V + + AL
Sbjct: 184 MAGQYLDIHDESAWASYPESEALDRAQRVLIYKSAKYSVEAPLAVGASLGAGTEEQIAAL 243
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+++G+ LG+AFQL DDVL G+ GK G+D R GK T + +A Q+ +
Sbjct: 244 RAFGLPLGVAFQLRDDVLGIFGDPERTGKPAGDDLREGKRTAIIAIARQKLSTSANAILD 303
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEV 313
+ D +S E + ++++ A+ E ++A +++ P + K L+E+
Sbjct: 304 ELLGDPDLSTEQVNMIRSTLKDSGAVEQIERVISRNLERACEAIENAPLAPTAKARLLEL 363
Query: 314 VDFCLQRL 321
R
Sbjct: 364 AQAATTRT 371
>gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
Length = 294
Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 113/315 (35%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L R+ + + + ++Y + GGKR RP L T ML + A AIE IH +L
Sbjct: 20 LDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG + + T++L GD L + AF
Sbjct: 80 IHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ + EE A++ SA +
Sbjct: 140 IQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKA 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 FEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQDLNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L + +A + Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAQEKAQTLLQEALQALAAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+SL E + ++R N
Sbjct: 280 QSLEEFARYVIERKN 294
>gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 298
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ +V + + + + + Y + +GGKR+RP+L LA
Sbjct: 1 MGSIQAYLQTRARQVEEALEGSLPVQWEFPADLRESMLYSLMAGGKRIRPVLVLAAVESF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +ACAIE IHT +L+HDD+ +D+ RRGK +G ++L GD LL+
Sbjct: 61 GLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF V + Q A + A + + +T + L I
Sbjct: 121 HAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEELEYIH 180
Query: 167 SKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ +L +++AG +AL +G +G+AFQ++DD+LD G+ ++GK +
Sbjct: 181 ACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAKLGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + K T P + L +
Sbjct: 241 KSDEKQKKVTYPYFI--------------------------------------GLKASRD 262
Query: 286 RAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQR 320
+ ++ K +L L + + L+ + D+ LQR
Sbjct: 263 KVKGLTEQGKQALLEANLSNPEY---LIGIADYLLQR 296
>gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 303
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ +V + + + + + Y + +GGKR+RP+L LA
Sbjct: 6 MGSIQAYLQTRARQVEEALEGSLPVQWEFPADLRESMLYSLMAGGKRIRPVLVLAAVESF 65
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +ACAIE IHT +L+HDD+ +D+ RRGK +G ++L GD LL+
Sbjct: 66 GLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGDALLT 125
Query: 116 QAFCMVIETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF V + Q A + A + + +T + L I
Sbjct: 126 HAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEELEYIH 185
Query: 167 SKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ +L +++AG +AL +G +G+AFQ++DD+LD G+ ++GK +
Sbjct: 186 ACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAKLGKPV 245
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + K T P + L +
Sbjct: 246 KSDEKQKKVTYPYFI--------------------------------------GLKASRD 267
Query: 286 RAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQR 320
+ ++ K +L L + + L+ + D+ LQR
Sbjct: 268 KVKGLTEQGKQALLEANLSNPEY---LIGIADYLLQR 301
>gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
Length = 295
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKR--ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLA 68
++V+ + +R + D + ++Y +F+GGKR+RP+L A+AL + +A
Sbjct: 14 QQVDTALDQRFPLGDDPTQLRAAMRYSLFNGGKRVRPILAYASALAINPHISLKQVDPIA 73
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E +H +L+H +DD LRRGK + + T++L GD L + AF ++ ++
Sbjct: 74 AAVECLHAYSLVHDDLPAMDDDDLRRGKPTCHIAFNEATAILAGDGLQTLAFELLGSIEA 133
Query: 127 QEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + +T E + + KT L A++ +
Sbjct: 134 PADIRIQLIQVLAKGSGVEGMVLGQAIDLAAVEQQLTLEQLETMHRYKTGALIRASVTMG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG N+ AL Y +G+AFQ+ DD+LD + +GK G D KPT +L
Sbjct: 194 ALFAGANNTQLAALDQYASAIGLAFQVQDDILDVISDTQTLGKQQGADIARNKPTYVSLL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L +A ++A+ +L
Sbjct: 254 --------------------------------------GLDAARTKADDLYRQAQKALDG 275
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
S+ L ++ + ++R +
Sbjct: 276 FGSSA--DPLRQLASYIVERTH 295
>gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
Length = 296
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 123/333 (36%), Gaps = 53/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M L D + + ++ + + + + +++ GGKRLRP+L ATA +
Sbjct: 2 MLSLRDALDEVAQDIDRRFAQVLADPGDPRASLYAAMRHAAIGGGKRLRPLLVFATARLF 61
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ D +A A+E IH +L+H +DD +RRGK + T++L GD L +
Sbjct: 62 DVDRDCAGWVATALEAIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCLHA 121
Query: 116 QAFCMVIETKSQEALEALSLVACT--------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF ++ + + S + G ++ + +
Sbjct: 122 LAFEILADPSTHPDPFVRSELILDLARASGPSGMAGGQMMDLEAERQIFDLPTVTRLQQM 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L AA+E +++ V R L+ Y +LG+AFQ+ DD+LD G+ GK + +
Sbjct: 182 KTGALICAAVEAGAILGRVPPEGRTHLRGYAHDLGLAFQIADDLLDAEGDEAVAGKKLRK 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T +L + +
Sbjct: 242 DEDAGKATFLSLL--------------------------------------GVERAREQC 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A + LR L + + ++R
Sbjct: 264 RMLVSQAIEHLRDY--GPEADLLRAIASYVVER 294
>gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 136/332 (40%), Gaps = 51/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML+ ++ ++ + + + S + + + Y + +GGKR+RP+ +A M
Sbjct: 3 NMLKQFIDHNIPQLETTMYELVESIKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQ 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A+E IHT +L+HDD+ LRRGK +V+G + L GD L + A
Sbjct: 63 SLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLA 122
Query: 118 FCMVIETKSQEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ + A + + LV G + + ++ V +KT
Sbjct: 123 FGVIARLNNLSAEKRIELVNLLSVAAGTEGMVGGQVLDMDGEKRLLNLKELETVHVNKTG 182
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++E +++A S R+AL Y ++G+AFQ+ DD+LD G ++GK G+D
Sbjct: 183 ALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVA 242
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ K T P +L L + + +
Sbjct: 243 SDKSTYPALLT--------------------------------------LEGAKQKLDEH 264
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A ++L+ + L + + ++R N
Sbjct: 265 YELAIEALQKIDI--DTTLLRQFAQYIVRRSN 294
>gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 359
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 70/348 (20%), Positives = 127/348 (36%), Gaps = 43/348 (12%)
Query: 14 KVNFLILKRI----------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RG 61
VN + + + +D ++ + ++ + GGKRLRP +
Sbjct: 14 AVNEELREYLRGRRRDAAYIGTDYAVLTEALEEFVLRGGKRLRPAFAYWGFRAVAGTEPE 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + L A+E +H L+HDD++D SA RRG ++ + L +
Sbjct: 74 PHIMRLFSALELLHACALVHDDLIDASATRRGLPTVHRIFS---ERHRSNNWLGSSDQFG 130
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------------------ 163
+ +L +AE + + + V
Sbjct: 131 LSAAILLGDLSLVWADDIIAEAPIDDAAHRRVQRVWAAIRTEVLGGQYLDIVNEASGSET 190
Query: 164 -------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
I + S L++ + AG + + +A G +LG+AFQL DDVL G
Sbjct: 191 VASALTVNIYKTASYTISRPLQLGAAAAGDRPEILEAFHELGTSLGVAFQLRDDVLGVYG 250
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIM 274
+ GK G+D R+GK T+ + A + + + + +S +K+ +++
Sbjct: 251 DPAVTGKPSGDDLRSGKRTVLLAEAVELADRHDPPAAQLLRTSIGTDLSDAQVKELCLVI 310
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
AL E R + ++A D + P D K L E+ R
Sbjct: 311 EAVGALAAVESRIDTLTRRALDIMNSAPIDVRAKAGLAELARLAANRS 358
>gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
Length = 294
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LEQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSL 79
Query: 80 LH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+H +DD LRRG+ + + T++L GD L + AF + +
Sbjct: 80 IHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGPLSPSAENQRVNM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A S A + G+ L E K A++ A +
Sbjct: 140 IKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
Length = 294
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 71/315 (22%), Positives = 112/315 (35%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L R+ + + + ++Y + GGKR RP L T ML + A AIE IH +L
Sbjct: 20 LDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG + + T++L GD L + AF
Sbjct: 80 IHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ + EE A++ SA +
Sbjct: 140 IQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKA 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 FEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L + +A + Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAQEKAQTLLQEALQALAAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 71/331 (21%), Positives = 127/331 (38%), Gaps = 50/331 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS-DVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L+ ++ ++ + + D + + D + Y + +GGKR+RP+ LA +
Sbjct: 3 EPLKYFIESNIPQIEETMFALVSKIDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRK 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +++ IE IHT +L+HDD+ RRGK V+G + L GD L + A
Sbjct: 63 NLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLA 122
Query: 118 FCMVIETKSQEALEALSLV------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + G + + + V +KT
Sbjct: 123 FGILARMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGA 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++E +++A R LK Y ++G+AFQ+ DD+LD G E+GK G+D +
Sbjct: 183 LLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVAS 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + + +
Sbjct: 243 DKSTYPALLT--------------------------------------LDGAKEKLAEHY 264
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP + L + + + R N
Sbjct: 265 QHAINALDQLPIDA--SLLRDFAAYIVHRKN 293
>gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H]
gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H]
Length = 301
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 71/333 (21%), Positives = 133/333 (39%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+D + ++ I + D ++ + ++Y GGKRLR L + A +
Sbjct: 9 SLKDALARACSEIESTIDTLLPMVPGDESVLIEAMRYAALGGGKRLRGFLAVEVATLFGA 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A ++E +H +L+H +DD LRRG+ + + ++L GD L ++A
Sbjct: 69 DRKAALRVAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDALQTRA 128
Query: 118 FCMVIETKSQEALEALSLVACTL--------AEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
F +++E ++ + +A L G + + + + KT
Sbjct: 129 FEILVEPETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRALPLDQVRRLHALKT 188
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A E +++A V ++ R A+ +YG +LG AFQ+ DDVLD E+GK G+D
Sbjct: 189 GALIRYAAESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDSTATAEELGKTAGKDE 248
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+GK T +L + A
Sbjct: 249 ASGKSTYVSLL--------------------------------------GIDGARAEARR 270
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+++L + +L + D+ ++R N
Sbjct: 271 LSDRAREALSSF--GAQADALRALADYVVERRN 301
>gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
Length = 300
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 68/329 (20%), Positives = 121/329 (36%), Gaps = 59/329 (17%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + ++ + + + ++Y + GGKR+RP L T + ++ +A
Sbjct: 12 ERINDFLAAKLEGLTINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVAG 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVI 122
A+E IH +LLH +DD LRRGK + T++L GD L + AF
Sbjct: 72 ALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTFS 131
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA------- 175
+S + + L + Q ++ + VL S
Sbjct: 132 MNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALLE 191
Query: 176 --ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
L + V + L Y +G+A+Q+ DD++D E+GK +G D K
Sbjct: 192 ASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAANK 251
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ L + +A + Q+
Sbjct: 252 STYP----------------------------------ALL----GLQGAQDKAENLLQQ 273
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L LP + +SL + F ++R +
Sbjct: 274 ALQALSRLPYN--TQSLADFATFIVKRSH 300
>gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329]
Length = 294
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LEQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSL 79
Query: 80 LH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+H +DD LRRG+ + + T++L GD L + AF + +
Sbjct: 80 IHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGTLSPSAENQRVNM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A S A + G+ L E K A++ A +
Sbjct: 140 IKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
Length = 365
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 66/336 (19%), Positives = 121/336 (36%), Gaps = 32/336 (9%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDN--HVLLACAIE 72
++ I +++ + D + +GGKRLRP A + + + A ++E
Sbjct: 29 EKRVIDAIGAELSPVLDAARDYT-AGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLE 87
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWG----------------NQTSVLVGDFLLSQ 116
F+H + L+HDD++D S RRG + + ++L+GD LL
Sbjct: 88 FLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMW 147
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ M + A + E+ + + + V
Sbjct: 148 SSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVE 207
Query: 177 LEVSSLIAGVQNSV-----------RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ +S + +Q + +G +G AFQ DD+L G+ GK
Sbjct: 208 YKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPA 267
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D R GK T+ V A R + KS + + +++ A I+ + A E
Sbjct: 268 GDDLREGKRTVLVAHALDRADSHDAARLKSLLGRPDLDDDDVATARRIIETSGAREAVES 327
Query: 286 RAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
A L + + +L E+ C++R
Sbjct: 328 TIVQCHDHAVAVLDDAEMTDAGRIALRELARQCVER 363
>gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2]
gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1]
gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3]
gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1]
gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase
[Propionibacterium acnes 266]
Length = 365
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 66/336 (19%), Positives = 121/336 (36%), Gaps = 32/336 (9%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDN--HVLLACAIE 72
++ I +++ + D + +GGKRLRP A + + + A ++E
Sbjct: 29 EKRVIDAIGAELSPVLDAARDYT-AGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLE 87
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWG----------------NQTSVLVGDFLLSQ 116
F+H + L+HDD++D S RRG + + ++L+GD LL
Sbjct: 88 FLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMW 147
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ M + A + E+ + + + V
Sbjct: 148 SSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVE 207
Query: 177 LEVSSLIAGVQNSV-----------RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ +S + +Q + +G +G AFQ DD+L G+ GK
Sbjct: 208 YKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPA 267
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D R GK T+ V A R + KS + + +++ A I+ + A E
Sbjct: 268 GDDLREGKRTVLVAHALDRADSHDAARLKSLLGRPDLDDDDVATARRIIETSGAREAVES 327
Query: 286 RAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
A L + + +L E+ C++R
Sbjct: 328 TIVQCHDHAVAVLDDAEMTDAGRIALRELARQCVER 363
>gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74]
gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74]
Length = 385
Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 81/344 (23%), Positives = 135/344 (39%), Gaps = 25/344 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTL 51
+ L + V ++ + + V Y GGK +RP L L
Sbjct: 41 DVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGNPVSGDGGKAVRPALAL 100
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+A + + V A A+E +H +LLHDD++D RR + V G ++LVGD
Sbjct: 101 ISAEVTGAGAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGD 160
Query: 112 FLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
L + A + ++ A L+ L +G+ + +S VT E+ L + +K
Sbjct: 161 ALFALANEVLLELGTAEAGRATRRLTRATRALIDGQAQDISYEHRDRVTVEECLEMEGNK 220
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ GK D
Sbjct: 221 TGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSD 280
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF----------IIMRENR 278
R K +LPV+ A G + D ++ ++ E
Sbjct: 281 LRQRKKSLPVVAALAAGGPASDKLARLLAADAATGPGSVPAEEFSEEEFAARAALIEEAG 340
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
T A A +L +P + S + + DF + R
Sbjct: 341 GREWTSREARRQFDIAIGALDSVPMPPHVRASFVALADFVVVRK 384
>gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 306
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 18/314 (5%)
Query: 12 MEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ ++ LK + S ++ ++ K L GK LR L L+ A + V L
Sbjct: 4 LTRIEAKVQEFLKELQS--PLVLNLSKNLQS--GKMLRSKLALSIA----GESEESVRLC 55
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE I A+LLHDDV+D + RR K + ++G++ ++++GD L S+AF +
Sbjct: 56 AIIEMIQNASLLHDDVIDKATTRRNKPSVNALFGDKNAIMLGDVLYSKAFSELTCFAKDY 115
Query: 129 ALEALSLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ GE+ ++LS + E YL +I+ KTA L A ++ +AG
Sbjct: 116 PQIPRIVANAVTTLAIGEIEDVALSGAFNADEAKYLAMIEHKTAALIEATAYAAAFLAGK 175
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + YG NLG+AFQ++DDVLD + +GK DF+ GK TLP + +
Sbjct: 176 DEKDARGFQIYGRNLGVAFQIIDDVLDIIADSKTLGKPALSDFKEGKTTLPYLHLYHTLD 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
K + + E + ++++ A+ + A G+ +++ +
Sbjct: 236 KIGQERLCNAFGKELEESEQV-WILEHLKKSGAIEKSIEFAKHLGKMGVEAIA----NQS 290
Query: 307 KKSLMEVVDFCLQR 320
L E++ + R
Sbjct: 291 CDKLTEIMHAMVDR 304
>gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb18]
Length = 374
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 12/270 (4%)
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A
Sbjct: 108 GNILPSQRRLAEITEVIHTASLLHDDVIDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRA 167
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTA 170
+ + E +E ++ V L EGE QL ++ + I K+A
Sbjct: 168 SVALARLRDPEVIELVATVIANLIEGEFMQLRNTELDEENPFFTEEAITYYLQKTYLKSA 227
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK G D +
Sbjct: 228 SLISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLK 287
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G T P++ A++ + + +++ A I+ ++ L T A Y
Sbjct: 288 LGLATAPLLFAWRGNPELGA-----LVGRKFRREGDVQLARQIVAQSDGLEQTRALAQEY 342
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA +S+ LPDS K L+E+ QR
Sbjct: 343 TDKAIESISILPDSEAKAGLIEMCAKLTQR 372
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 28/75 (37%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ I + + S ++ + KY S GK +RP+L L + + + E
Sbjct: 1 MKKNIQQLLGSGHPLLDRIAKYYTRSEGKHVRPLLVLLMSQATAIASKSPRQVQSVSESG 60
Query: 75 HTATLLHDDVVDDSA 89
+ ++ D+
Sbjct: 61 INEAITSPAILADTN 75
>gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 294
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 68/333 (20%), Positives = 120/333 (36%), Gaps = 53/333 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L L ++ ++ + + + +I + ++Y + GGKR RP L T ML +
Sbjct: 3 EALTSLQQRNNRQLERWLNQLPHQEQPLI-EAMRYGLLLGGKRARPFLVYITGQMLGCKL 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF- 118
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + AF
Sbjct: 62 EELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFT 121
Query: 119 ---------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
A + A + G+ LS E
Sbjct: 122 ILADGELSPEAETYRIKMVKALAEASGANGMCLGQALDLSAEGQKVSLAELENIHRNKTG 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ A + + + L + +G+AFQ+ DD+LD + +GK G D
Sbjct: 182 ALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIISDTETLGKPQGSDQ 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ L +A++
Sbjct: 242 DLDKSTYP----------------------------------ALL----GLEGAINKAHT 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L +P + + L E + ++R N
Sbjct: 264 LLTEALQALEAIPYN--TELLEEFARYVIERKN 294
>gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
Length = 294
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/333 (21%), Positives = 122/333 (36%), Gaps = 53/333 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L L + +++ + + + + D ++Y + GGKR RP L T ML
Sbjct: 3 EALTSLQQRSNQQLERWL-DTLPHQQQPLIDAMRYGLLLGGKRARPFLVYITGQMLGSSL 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF- 118
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + AF
Sbjct: 62 EQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFT 121
Query: 119 ---------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + A + A + G+ L+ + +E
Sbjct: 122 ILAEGQLSPEAEAQRIMMVKVLAEASGAAGMCMGQALDLAAENRIVSLQELEEIHRNKTG 181
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ A + V L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 182 ALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVISDTETLGKPQGSDQ 241
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +A++
Sbjct: 242 ELNKSTYPALL--------------------------------------GLEGAINKAHT 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A +L +P + + L E + ++R N
Sbjct: 264 LLKEALQALDAIPYN--TELLEEFARYVIERKN 294
>gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 361
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/353 (19%), Positives = 122/353 (34%), Gaps = 44/353 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ ++ + E I + ++ + GGKRLRP D
Sbjct: 10 SEFERVLRDFLHDAGESICRIEPTFGPAVSTLRDFVLGGGKRLRPTFAWWAWRGAGGTPD 69
Query: 63 N-----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----LVWGNQTSVLVGDF 112
+ + ++E I L+HDDV+D S RRG + F
Sbjct: 70 SDEAEGVLRAVASLELIQACALIHDDVIDSSDSRRGSPTVHVAFAARHTRERWLGSAEAF 129
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS----- 167
+ A + + R + +V YL V
Sbjct: 130 GQAAAVLIGDLALAWAEDMFAECGLPPATIAAARPAWRAMRTEVLAGQYLDVHTQATGDT 189
Query: 168 ------------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
A L + + +AG + + AL +G LG+AFQL DD+L
Sbjct: 190 SVEAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLDFGGELGVAFQLRDDLLGVF 249
Query: 216 GEVNEMGKNIGEDFRNGKPTLPV----ILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
G+ + GK G+D R GK TL V A ++G+ +E+ + D ++ +
Sbjct: 250 GDPSVTGKPAGDDLREGKRTLLVALGLDYAERQGSTKERKMIAEAVGDPDLTDAEVDDVR 309
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+ A+ + E R + + A +L L + + L+E+ D +R +
Sbjct: 310 QALVSVGAVAEVERRIEAMTENALAALRKASLAE-PAAQRLVELADRATRRTS 361
>gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 349
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 69/328 (21%), Positives = 126/328 (38%), Gaps = 27/328 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I +D + ++ + GGKRLRP + + + +LL A+E +H
Sbjct: 21 AYIGNDYNGLIAALEDFVLGGGKRLRPAFAYWGWRAVATDEPDEQVLLLFSALELLHACA 80
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVGDFLLSQAFCM-- 120
L+HDDV+DDS+ RRG+ + + ++L+GD L+ A +
Sbjct: 81 LVHDDVIDDSSTRRGRPTTHVQFATLHRDRGWQGSPERFGASAAILLGDLALAWADDIVF 140
Query: 121 ----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + + ++ L L ++ + S
Sbjct: 141 GIDLTPQAQRRIRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRP 200
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 201 LQLGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 260
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ A + + +++ + + ++ AL E R + Q+A
Sbjct: 261 LLAEAVELAETSDPVAANLLRTSIGAQLTDAQVDRLREVIESVGALAAAEQRIATLTQRA 320
Query: 295 KDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+L P +++ K L E+ R
Sbjct: 321 LATLAAAPINTAAKAGLSELAKIATNRS 348
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
Length = 290
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKIG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLLLNTYALY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + AL + + + + ++ ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGENALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ ++ + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIDKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + + +L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKN--TDNLKEITMFLLNR 288
>gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116]
gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116]
Length = 294
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 69/315 (21%), Positives = 117/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 20 LEQLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSL 79
Query: 80 LH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+H +DD LRRG+ + + T++L GD L + AF ++ E E +
Sbjct: 80 IHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGALNPNAENQRIKM 139
Query: 138 CT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ G+ L + A++ A +
Sbjct: 140 VQALAQASGAGGMCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 LEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAMEKAHTLLQEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 297
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 TSIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA+ ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
Length = 556
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A +
Sbjct: 294 PSQRRLAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVAL 353
Query: 122 IETKS-------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++ + L + R + + T + YL KTA L S
Sbjct: 354 ARLRNAEVVELLSTVIANLVEGEFMQLKNTARDETNPVWSEATLQYYLQKTYLKTASLIS 413
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ G A +YG NLG+AFQLVDD+LDY ++GK G D G
Sbjct: 414 KSCRAAALLGGADAQTVDAAYAYGKNLGLAFQLVDDMLDYTRSAKDLGKPAGADLELGLA 473
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + ++ +A I+ + + T A Y ++A
Sbjct: 474 TAPLLFAWRENPELGA-----LVGRKFAQPGDVARAREIVLASDGVEQTRALAQDYAEQA 528
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++ P+S K L+E+ L+R
Sbjct: 529 IAAISAFPESDAKNGLVEMAIKTLKRQ 555
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
K+M+ + + K + S + KY + GK +RP++ L +
Sbjct: 146 VAKEMKYLIGDVRKLLGSGHPSLDRAAKYYTQAEGKHMRPLIVLLMSRA 194
>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
Length = 293
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 52/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + E++N + + S + + + ++Y + +GGKR+RP+L L T + +
Sbjct: 2 EIKGVIETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTYKLYKT 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +A AIE IHT +L+HDD+ +D+ LRRGK V+G +VL GD LL++A
Sbjct: 62 DCNEVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTA 170
++ + A+ + + + N + + ++ KT
Sbjct: 122 MSLMFRHCIGKKDNAIRACSIISESAGADGMVGGQTVDILSENTKIPIDQLYYMHSKKTG 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L ++ +++ AG + L YG LG+AFQ+ DD+LD G+ +GKNI D
Sbjct: 182 ALIKGSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGDTALLGKNIKSDLN 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T + + S
Sbjct: 242 NNKTTFI--------------------------------------STYGINKCKEMCNSI 263
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ L + S L ++ F L R
Sbjct: 264 TSECIGVLNGM--SVDTSYLKDLTSFLLNR 291
>gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 361
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 129/334 (38%), Gaps = 53/334 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + VN + I + I ++Y + GGKR+ P++ ++ ++ +
Sbjct: 67 NFKAYMLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQE 126
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + CA+E +H +L+ DD +D+ +RRGK + +G ++L D LL+ AF
Sbjct: 127 STAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLALAFE 186
Query: 120 MVIETKSQEALEALSLVACTLA-----------EGELRQLSLSKNLDVTEEDYLHVIKSK 168
V + + + V G+ LS + ++ E + +K
Sbjct: 187 HVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINK 246
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A+ + +++ G + + L+ +G +G+ +Q+VDD+LD E+GK G+D
Sbjct: 247 AGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKD 306
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P ++ + + A
Sbjct: 307 LVADKVTYPKLV--------------------------------------GIEKSREFAE 328
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A D L SL+ +V+F R N
Sbjct: 329 KLNGDAWDMLSEFDQEKA-ASLLAMVNFATYRQN 361
>gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 350
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 134/339 (39%), Gaps = 31/339 (9%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLI---------FSGGKRLRPMLTLATALMLE-YRGDN 63
+V+ + + + + + + L+ +GGKRLR D
Sbjct: 13 RVDAELREFARRETDRLVAIDADLLPVAEQLDVALTGGKRLRASFCYWGWRAAGQPDSDA 72
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-------------LVWGNQTSVLVG 110
V A A+E +H A ++HDD++D+S +R G +A ++L G
Sbjct: 73 LVRAAAAMELVHAAAVVHDDLIDESPIRHGVPSAHVALRAAFTGRPRPHAGSRALALLTG 132
Query: 111 DFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
D L+S A + + A E ++A L GE ++ + + T +
Sbjct: 133 DLLMSWAAELFLCCGLPSAYLSRARELWLVMARELIAGECLEVLRTGSPPDTGRSLQVIR 192
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
L + +AG +V +A +YG+ LG AFQL DD+L G+ GK+
Sbjct: 193 YKTAKYTVEHPLRIGGALAGAPGAVMEAFTAYGLPLGEAFQLRDDLLGLFGDPELTGKSN 252
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+D R +PT+ + + T E+ + + + E L + IMR A E
Sbjct: 253 LDDVRGNRPTVLLAETWAAATAAERRELRGLLGRRDLEGEGLSRVRSIMRRTGAPERVEE 312
Query: 286 RAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ A D+L LPD + +L ++V R +
Sbjct: 313 MIDERVRAATDALDRADLPDGAA-AALSQMVASAAARHS 350
>gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32]
gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
splendidus LGP32]
Length = 294
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 71/315 (22%), Positives = 112/315 (35%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L R+ + + + ++Y + GGKR RP L T ML + A AIE IH +L
Sbjct: 20 LDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG + + T++L GD L + AF
Sbjct: 80 IHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ + EE A++ SA +
Sbjct: 140 IQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKA 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 FEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQDLNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L + +A + Q+A +L +P +
Sbjct: 253 -------------------------------GLEGAQEKAQTLLQEALQALAAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QLLEEFARYVIERKN 294
>gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
fischeri NRRL 181]
gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
fischeri NRRL 181]
Length = 357
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 5/293 (1%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
++ ++I + YL GK +R L A L+ D ++ + +H+A+LL DD+
Sbjct: 66 TEEKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDI 125
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ +F A + + EA+ + L G+
Sbjct: 126 QDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRGQ 185
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L +L E+ + + + L GI
Sbjct: 186 GLDLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMESQNTKDCVPLVDLL---GII 242
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K GED GK + PVI + + + +
Sbjct: 243 FQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPVIHSIRS--DLSNFQLMNILKQKTEDE 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + A I++ + + S +A++ L+ D L ++DF
Sbjct: 301 DVKRYAVRIIKSTGSFDYCRKKLASLTAEAREILKDFGDLGNTDGLKGILDFL 353
>gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
Length = 341
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 10/303 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + ++ +Y + + GK LRP+L +A+A V A A+E++H A+L+HDDV+D
Sbjct: 37 DRMHEIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYLHVASLIHDDVIDG 96
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
LRRG+ + ++G ++ GD LL + F V E + + L A +
Sbjct: 97 DDLRRGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDTAVLAAIRVLAEAGGD 156
Query: 148 LSLSKNLDVTEEDYL----------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
L + + + KT L AA +L++G +A+ +
Sbjct: 157 LCRGQVQEAELAAAWPGAGGLDAYREMASLKTGALLRAACRAGALLSGGSPEETEAVTVF 216
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+LG+AFQ+ DD+L Y + GK D N +PT PV+LA + +++ + +
Sbjct: 217 AGHLGLAFQMYDDLLPYLADPAVTGKPGTSDAANLRPTFPVLLAHEAAGPEDRHRLEQAL 276
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
++ AL RAY+ +A+ +L LP L + D
Sbjct: 277 GGDFTPERTFAVLREVLLATGALDLARDRAYAEIARARAALAPLPSGDAHGLLSAIADLT 336
Query: 318 LQR 320
+ R
Sbjct: 337 VHR 339
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 138/332 (41%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E+V + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEVELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL + + + + ++ ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + ++
Sbjct: 237 EDNHKTTFVKVY--------------------------------------SIDKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL + + + + ++ ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
SWAT-3]
gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
SWAT-3]
Length = 294
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 73/334 (21%), Positives = 122/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ E++N + R+ + + + ++Y + GGKR RP L T ML
Sbjct: 2 IETLLSYQARNNEQLNLWL-DRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRG + + T++L GD L + AF
Sbjct: 61 AEELDTPASAVECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILTGDALQTLAF 120
Query: 119 ----------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
A + A + G+ + +E
Sbjct: 121 TILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLKELEEVHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ SA + V L Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 181 GALMKSAIRLGALAAGEKAFEVLPQLDKYADAIGLAFQVQDDILDIIGDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 241 QDLNKSTYPSLL--------------------------------------GLEGAQEKAQ 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S Q+A +L +P + + L E + ++R N
Sbjct: 263 SLLQEALQALAAIPYN--TQLLEEFARYVIERKN 294
>gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030]
gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030]
Length = 295
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L
Sbjct: 21 LEQLPYQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSL 80
Query: 80 LH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+H +DD LRRG+ + + T++L GD L + AF + +
Sbjct: 81 IHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGPLSPSAENQRVNM 140
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A S A + G+ L E K A++ A +
Sbjct: 141 IKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKG 200
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 201 IEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 253
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ Q+A +L +P +
Sbjct: 254 -------------------------------GLEGAIEKAHTLLQEALQALEAIPYN--T 280
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 281 QLLEEFARYVIERKN 295
>gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
Length = 312
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/342 (21%), Positives = 117/342 (34%), Gaps = 62/342 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVE--------MIPDVVKYLIFSGGKRLRPMLTLAT 53
+ L L+ + + E + + ++Y +GGKRLRP L +A+
Sbjct: 12 QDFNKLLDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVAS 71
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGD 111
A M + +L A+E IH +L+HDD+ LRRG+ + + + T++L GD
Sbjct: 72 AAMFDVPRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGD 131
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDY 161
LL+ AF ++ + L+ LA + D
Sbjct: 132 SLLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDV 191
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+ + KT L +L+ AL +YG G AFQ+ DD+LD G+ +
Sbjct: 192 AKLQQMKTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGDAAAL 251
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D GK T L L
Sbjct: 252 GKPAGQDAALGKTTFVTQL--------------------------------------GLD 273
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQRLN 322
R ++A +L K L F +R N
Sbjct: 274 GARRRLQDLLKQADAALAPFG---AKGDVLRAAARFVAERQN 312
>gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae]
Length = 302
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 55/326 (16%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN +L +R+ + + +KY GGKRLRP L A ML +N + A A
Sbjct: 15 RVNKTLLNQFQRLPFNQSQLVAAMKYGALLGGKRLRPFLVYAIGDMLNVAVENLDVPAAA 74
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ + +
Sbjct: 75 VECIHAFSLIHDDLPAMDNDNLRRGQPTCHISFGEAHAILAGDALQTLAFDILSRSAMPD 134
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ L + G+ + A++ +A
Sbjct: 135 VSDTYRLAMIAELATATGAAGMCGGQALDMESEGQQIDFTTLETIHHHKTGALIRAAIRM 194
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ N + L +Y +G+ FQ+ DD+LD G+ + +GKN G D ++ K T P
Sbjct: 195 SALTAGNQGNKLLPLLDNYANAIGLLFQVHDDILDVTGDTDILGKNQGSDKKHKKSTYPS 254
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L + +A + ++A D+L
Sbjct: 255 LI--------------------------------------GLEQAQKKANNLYEQALDTL 276
Query: 299 RCLPD--SSWKKSLMEVVDFCLQRLN 322
L ++L + F ++R +
Sbjct: 277 YMLEQQYGLNTETLQNLTHFIIERKS 302
>gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [NC10 bacterium 'Dutch sediment']
Length = 312
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 68/347 (19%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + V+ + + + SD I + V+Y +F+GGKRLRP+L LA
Sbjct: 4 EELRRYLDERRLLVDEALEQYLPQASDPPKEIHEAVRYSVFAGGKRLRPILILAATEAAG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + + A AIE IHT +L+H +DD RRG++ V+G ++L GD LL+Q
Sbjct: 64 GQMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGDALLTQ 123
Query: 117 AFCMVIETKSQEALEALSLV-----------------------ACTLAEGELRQLSLSKN 153
AF ++ A G L ++
Sbjct: 124 AFILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVDMLQED 183
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
++ ++ + KT L L V ++A + +AL YG +G+AFQ+VDD+LD
Sbjct: 184 REIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIVDDILD 243
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G + +GK G D R K T P +
Sbjct: 244 LEGSLEVLGKQAGSDLRKKKATFP----------------------------------AL 269
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + ++ A+ +A++++ D +L + +F + R
Sbjct: 270 L----GIEESRRWAHRLVSEAQEAVAVFGDRGV--ALQAIAEFVVMR 310
>gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
Length = 293
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + + +V+ + +R + + + + GGKR+RP L + M
Sbjct: 1 MLVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMSHGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + + T++L GD L + A
Sbjct: 61 PLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKT 169
F +V E + + E + LA+ + + KT
Sbjct: 121 FEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5]
gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5]
Length = 296
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 128/334 (38%), Gaps = 55/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ +E + ++ + + I + ++Y + +GGKRLRPML T +
Sbjct: 2 NFKETYQTKVEAIERILKAYLPAGEGYQTVIMEAMEYALMAGGKRLRPMLMQETYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G AIE IHT +L+HDD+ +D+ RRG+ +++G +L GD LL+ A
Sbjct: 62 CGTRIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVMYGEDIGILTGDALLNCA 121
Query: 118 FCMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKS- 167
F + E ++L + + + D + L+ I
Sbjct: 122 FETAAKAFDMEPEKSLQTGKALQILAGKAGIYGMIGGQVVDVKSTGDQISGEKLNFIYKL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + +++AG A++ +G+AFQ+ DD+LD E+GK I
Sbjct: 182 KTGALIEASMMIGAVLAGAAREQVNAVEEIAGKVGLAFQIQDDILDVTSTAEELGKPIHS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T + + + +
Sbjct: 242 DEKNEKTTYVTW--------------------------------------KGIDGAKALS 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++A L L + L ++++ + R
Sbjct: 264 EKISREALQQLESLGAPD--EYLAQLLESLINRS 295
>gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 128/321 (39%), Gaps = 55/321 (17%)
Query: 13 EKVNFLIL-KRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
E VN + + + + + V+Y + +GGKR+RP+L +A ++ + ACA
Sbjct: 75 ESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACA 134
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 VEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGL 194
Query: 129 ALEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ A + DV E + KTA L AA
Sbjct: 195 VASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAA 254
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T
Sbjct: 255 AVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTY 314
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P ++ L + A ++A++
Sbjct: 315 PRLI--------------------------------------GLERSREVAEKLSREAEE 336
Query: 297 SLRCLPDSSWKKSLMEVVDFC 317
L +S L+ + +
Sbjct: 337 QLLGF-ESDKAAPLVALASYI 356
>gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
43049]
gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
43049]
Length = 280
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 43/299 (14%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ E + D V+++ SGGKR+RP +T+ L + V A IE +H A+L+ DD
Sbjct: 21 SVEPEELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASLVIDD 80
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
++D+S LRRG AA +G+ +++ D LL +AF + A+ V+ ++ E
Sbjct: 81 IIDESELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLFS-----TDERAMQTVSESMVEL 135
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ E++Y+ + + KT LF AA E+ ++ A +A+ Y +G+
Sbjct: 136 GEGEAMELVAEPSNEKEYMELARRKTGALFRAAAELGAIAADSDPYTVEAVGQYAERVGV 195
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DDVLD + +GK G D +P+
Sbjct: 196 AFQMRDDVLDATADAETLGKPAGTDAEMERPS---------------------------- 227
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLMEVVDFCLQR 320
L + + + RA + A +SL + P+S + L ++ +F + R
Sbjct: 228 ---LVEVTEL-----TTEEANERARAESDAALESLSTIDAPESQSMEYLRDLAEFVVVR 278
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS-DVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L+ ++ ++ + + D + + D + Y + +GGKR+RP+ LA + +
Sbjct: 3 EPLKYFIESNIPQIEETMFALVSKIDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQK 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +++ IE IHT +L+HDD+ RRGK V+G + L GD L + A
Sbjct: 63 NLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLA 122
Query: 118 FCMVIETKSQEALEALSLV------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + + G + + + V +KT
Sbjct: 123 FGILARMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGA 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++E +++A R LK Y ++G+AFQ+ DD+LD G E+GK G+D +
Sbjct: 183 LLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVAS 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P ++ N A + + +
Sbjct: 243 DKSTYP----------------------------------ALLTLNGA----KEKLAEHY 264
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP + L + + + R N
Sbjct: 265 QHAINALDQLPIDA--SLLRDFAAYIVHRKN 293
>gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter jejuni subsp. jejuni HB93-13]
Length = 297
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YKLSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA+ ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146]
gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 301
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/327 (19%), Positives = 116/327 (35%), Gaps = 55/327 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V+ + + + + + ++Y GGKRLRP L AT + A
Sbjct: 13 QRVDAALSRALDTLPFADGPLVGAMRYGALLGGKRLRPYLVYATGSLFGCSPTALDAPAA 72
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +LLH +DD LRRG+ + +G ++L GD L + AF ++ + +
Sbjct: 73 AVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGQMP 132
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L + G+ L A++ A
Sbjct: 133 GVTDRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVR 192
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L Y +G+AFQ+ DD+LD G+ ++ GK G D + K T P
Sbjct: 193 MGALAGGAPGRNALPVLDRYAAAIGLAFQVQDDILDVVGDSSKTGKRQGADQQLDKSTYP 252
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L +A + +A +
Sbjct: 253 ----------------------------------ALL----GLDQARQKAATLLDEALQA 274
Query: 298 LRCLPD--SSWKKSLMEVVDFCLQRLN 322
L L + ++L + F ++R N
Sbjct: 275 LAELEQCHNLDTQALKSLASFIVERDN 301
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85
E + + ++Y + +GGKR+RP+L + +A + + + A AIE IHT +L+HDD+ +
Sbjct: 33 ERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAM 92
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-------- 137
D+ RRG+ + +G ++L GD +A ++ + + L +V
Sbjct: 93 DNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQRLGVVQELASSTGV 152
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ G++ + + + L +I KT L ++ V +++AG +A+
Sbjct: 153 NGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAISR 212
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y LG+ FQ+VDDVLD G +GK G D GK T +
Sbjct: 213 YATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVF---------------- 256
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
L A + ++A +L L + +L E+ F
Sbjct: 257 ----------------------GLEGARREADAACERALRALGRL-EGRDTSALGELALF 293
Query: 317 CLQRLN 322
R +
Sbjct: 294 VRHRGS 299
>gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
Length = 302
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/321 (19%), Positives = 121/321 (37%), Gaps = 53/321 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E V+ L + + + + +++ GGKRLRP+L A + + D+ + +
Sbjct: 20 EDVDRLFDTLLAVPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASDLFNISRDSALRVGV 79
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD +RRGK + T++L GD L AF ++ + ++
Sbjct: 80 AVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILADEETH 139
Query: 128 EALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ G ++ + + KT L + ++
Sbjct: 140 PDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAFCVDA 199
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++++A + R L Y ++G+AFQ+ DD+LD G+ + GK +G+D GK T +
Sbjct: 200 AAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGDADLAGKALGKDAAAGKETFVSL 259
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L +A ++AK L
Sbjct: 260 L--------------------------------------GTDRARQQARLLVEQAKAHLH 281
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L + D+ ++R
Sbjct: 282 G--HGPEADLLRAIADYIVER 300
>gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
Pseudomonas Fluorescens Pf-5
gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
Length = 304
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/311 (19%), Positives = 111/311 (35%), Gaps = 52/311 (16%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH-- 81
++ + + +Y + +GGKR+RP+L A L + + ACA+E IH +L+H
Sbjct: 26 SPELARLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDD 85
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----------MVIETKSQEALE 131
DD LRRG+ + ++L GD L S AF
Sbjct: 86 LPAXDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTL 145
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + G+ L + A++ ++ + + +
Sbjct: 146 AQAAGPAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGEL 205
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 206 KALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP-------------- 251
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ L + A +A +LR + + L
Sbjct: 252 --------------------ALL----GLAAAKEYALELRDQALHALRPFD--AAAEPLR 285
Query: 312 EVVDFCLQRLN 322
E+ + ++R +
Sbjct: 286 ELARYIVERRS 296
>gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
Length = 344
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 30/333 (9%)
Query: 10 KDMEKVNFLILKRICSDVE------MIPDVVKYLI---------FSG--GKRLRPMLTLA 52
D+E+ +L R + + +V+ Y + SG GKR RP L A
Sbjct: 6 SDVERTMQELLARYGARFPALPGALPVYEVLAYHLGWRDERMQPASGVSGKRFRPALCTA 65
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
A + V +A AIE +H TL+HDD+ D S LRR + +WG+ ++ GD
Sbjct: 66 IASAVCGDAARAVGIAAAIELLHNFTLIHDDIQDRSRLRRHRPTIWALWGDAQAINAGDA 125
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEG-------ELRQLSLSKNLDVTEEDYLHVI 165
L + +E + + E ++ LS + +V+ +YL +I
Sbjct: 126 LFVLSQIAALEAAQALEPSRGAELVRRFNETALLIVEGQVLDLSFEQRPEVSVNEYLTMI 185
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KTA L + + +L+AG V L+ +G LG+ FQ+ DD L G+ GK
Sbjct: 186 ERKTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQIRDDYLGVWGDPAVTGKPR 245
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRALVDTE 284
G+D R K +LP++L +R ++ + ++S E + ++ +
Sbjct: 246 GDDLRQRKKSLPIVLVLERAAASDRAWLLDLWRRRTELSAEEVAAVIELLERYAVRTALQ 305
Query: 285 YRAYSYGQKAKDSLRCL---PDSSWKKSLMEVV 314
+ +A L L P+ SL +V
Sbjct: 306 EAVERFHGEALAELEALSLTPEGVA--SLQGLV 336
>gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 305]
Length = 297
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA+ ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
clavuligerus ATCC 27064]
gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
clavuligerus ATCC 27064]
Length = 395
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/334 (18%), Positives = 115/334 (34%), Gaps = 33/334 (9%)
Query: 13 EKVNFLILKRICS---------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++V ++ + + + + +++ + SGGKRLRP+L + D
Sbjct: 55 DQVEQVVEEFLAAKAAAASGAGHPPEVVRILRDFLASGGKRLRPLLCVVGWHAAGGDEDP 114
Query: 64 HVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF--------- 112
+L A E T L+HDD++DDSALRRG+ A +
Sbjct: 115 AAVLPVAASLELYQTFVLIHDDIIDDSALRRGRPAVHRALAARHVGHDSAARLGAGEALL 174
Query: 113 --LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI----- 165
L+ +C + ++ + V + + E I
Sbjct: 175 AGNLALIWCQELLHTAELDTPRRAAVHRVNDTMLAEVMFGQYRDLLGTERLDDDIEAALG 234
Query: 166 ---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
A L++ G + +G+ LG AFQL DD+LD G +
Sbjct: 235 IIRYKTAAGTIQRPLQLGVAAGGGDEETHRFCTEFGVPLGEAFQLRDDLLDVFGSPDGRS 294
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
D R GK T+ + LA ++ +S + ++ + I+ A
Sbjct: 295 APGLNDLREGKHTVLLALAMAGAGPGQRVRLRSLVGRARLDETGAAEIRAILEATGARDG 354
Query: 283 TEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVV 314
E + + + L LP+ ++L +
Sbjct: 355 VERMISARYDRCLEVLAGAALPE-RATEALRRLA 387
>gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
Length = 314
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 167/311 (53%), Gaps = 6/311 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + + + I SDV + + + L+ +GGKR+RP L + + + LA A+
Sbjct: 10 LNRFEEALSELIASDVLFVRLIHQDLVTAGGKRIRPRLVFLASRAIGGAPFE-MELALAV 68
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H+ATLLHDD++DD+ RRGK AA +GN SVL GDFLLS+ ++ +T E +E
Sbjct: 69 ELLHSATLLHDDLIDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRLLHVIAKTGRMELVE 128
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ VA TL+EGE+ Q ++ D + E+Y +I +KTAVL + E +L+ GV VR
Sbjct: 129 RFAQVAKTLSEGEVLQFQVAALEDYSLENYERIITAKTAVLMELSTEGPALLKGVDGEVR 188
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL +G+ G AFQ+ DD LD G +GK +G D R GK TL +L +R +
Sbjct: 189 EALARFGLYYGQAFQMRDDYLDLMGTPEALGKPVGGDVREGKATLITLLLMERFPEV--- 245
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + +L + ++ E+ + E R A +L+ LP S +K++L
Sbjct: 246 --REVLRRKGRREGDLDRLRMLAWESGVAEEVERRIRERALLAAAALKPLPPSPYKEALE 303
Query: 312 EVVDFCLQRLN 322
+ +RL+
Sbjct: 304 ALALREAERLS 314
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 53/317 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D + ++ V+ + + + + + + D ++Y + +GGKR+RP+LTL ML
Sbjct: 7 EFQDQLNEYIQLVDRELERLLPDEDILQKSVVDAMRYSVTAGGKRIRPVLTLEVCRMLGG 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IH+ +L+HDD+ +RRGK + + +G T++L GD LL+ A
Sbjct: 67 DPHKALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDALLTLA 126
Query: 118 FCMVIETKSQEALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + G S+ + +
Sbjct: 127 FETASHAPQTHGTGCEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLHQMHLL 186
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L AA ++ + AG Q + Y LG+AFQ+ DD+LD G+ ++GK +G
Sbjct: 187 KTGALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQLGKPVGS 246
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + K + + L ++ A
Sbjct: 247 DKQQQKTSFITLF--------------------------------------GLEESRSNA 268
Query: 288 YSYGQKAKDSLRCLPDS 304
AK+SL +
Sbjct: 269 QMMTTLAKESLASFEHN 285
>gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
Length = 297
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/335 (20%), Positives = 123/335 (36%), Gaps = 58/335 (17%)
Query: 4 LEDLTLKDMEKVNFLILKRICS-------DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ L ++ ++ I R + E + +++ GGKRLRP+L A+A +
Sbjct: 1 MSALLASELARIAQEIDARFDTLLTPPDDSRERLYAAMRHAAIGGGKRLRPLLACASARL 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + AIE IH +L+H +DD LRRG+ + T++L GD
Sbjct: 61 FAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILAGDGFQ 120
Query: 115 SQAFCMVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ AF + + + + G+ ++ + + +
Sbjct: 121 ALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDAISRLQ 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L ++E +++ V R L++Y +LG+AFQ+ DD+LD G+ MGK
Sbjct: 181 QLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGDPAAMGKAA 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G+D GK T +L +
Sbjct: 241 GKDHAAGKATFVGLL--------------------------------------GVDRARA 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A Q+A D L L ++ + + R
Sbjct: 263 QARLLSQQAIDHLGNF--GREADLLRDIAAYVVDR 295
>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
Length = 300
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 57/337 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D ++V + + + + ++Y + GGKR+RP+L A + +
Sbjct: 4 AFKDWVKACQQRVEKAAENNLPQEALIPQKLHSAMRYSVIGGGKRVRPLLVYAVGQIYDA 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+N L A A+E +H+ +L+HDD +D+ LR GK +G ++L GD L +A
Sbjct: 64 DPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHAAFGEAVAMLAGDALQPEA 123
Query: 118 FCMVIETKSQEALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ TK + + G+ LS+ N +T E+ + KT
Sbjct: 124 FLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEELRLMHSMKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ + + S L+ YG +G+AFQ+VDD+LD G+ E+GK G+D
Sbjct: 184 ALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTAELGKTAGKD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
KPT +L L + A
Sbjct: 244 ALGDKPTYVSLL--------------------------------------GLEKAKELAE 265
Query: 289 S---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KA + L D K+ L+E+ DF ++R +
Sbjct: 266 EQYLIAAKAVEGLS--EDLDGKERLIEIADFIIRRTH 300
>gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
12444]
gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
12444]
Length = 303
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 125/333 (37%), Gaps = 57/333 (17%)
Query: 7 LTLKDMEKVNFLILKR------ICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + + I + + D + + + ++Y GGKRLRP+L AT +
Sbjct: 11 LLKPALAAIAEDIDRSFDLLLPVPGDPRDRLVEAMRYAAIGGGKRLRPLLVCATGALHGV 70
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ V + AIE IH +L+HDD +D+ LR GK + + + T+VL GD L A
Sbjct: 71 SREAAVRVGTAIEAIHVYSLIHDDLPCMDNDGLRHGKPTVHVAFDDATAVLAGDALHDFA 130
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSKT 169
F ++ + + + TLA + + + + KT
Sbjct: 131 FEVLSDPATSGDPFTRIELIRTLATASGMNGMCGGQMMDIVAETSSFDLPTVTRLQQLKT 190
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++E+ +++ V R L+ Y ++G+AFQ+ DD+LD G+ GK + +D
Sbjct: 191 GALLGASVELGAILGKVPPEGRTHLRGYARDIGLAFQIADDLLDAEGDEAAAGKALRKDA 250
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T +L +A
Sbjct: 251 AQGKETFLSLL--------------------------------------GADRAREQARL 272
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + L L E+ F ++R +
Sbjct: 273 LVNQAVEHLASY--GPEADLLRELARFIVERNH 303
>gi|307945554|ref|ZP_07660890.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
gi|307771427|gb|EFO30652.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
Length = 141
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/125 (44%), Positives = 79/125 (63%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
YG+ LG AFQ+VDD LDY G ++GK++G+DFR GK TLPV+LA +RGT ++ FWK
Sbjct: 16 YGLELGFAFQMVDDALDYGGTSADLGKDVGDDFREGKITLPVVLAVKRGTDEDRAFWKRC 75
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
+ D I +L +A +M + A+ DT RA YG A +L LP+ + +L + V F
Sbjct: 76 LEDNDIRDGDLDQAIALMTKYDAISDTVQRARDYGASAMSALDQLPEGPHRDALADAVAF 135
Query: 317 CLQRL 321
C+ R+
Sbjct: 136 CIARV 140
>gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103]
gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103]
Length = 299
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/331 (22%), Positives = 121/331 (36%), Gaps = 54/331 (16%)
Query: 6 DLTLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+L +VN + L + + + ++Y GGKRLRP L AT ML
Sbjct: 5 ELLDAYHRQVNRALTGLLDALPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLHADKA 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E IH +L+HDD+ LRRG+ + +G T++L GD L + AF +
Sbjct: 65 SLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSI 124
Query: 121 VIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + L + G+ L+ + A
Sbjct: 125 LADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGA 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ +A + L Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 185 LIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIGKRQGADQD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P ++ L D +A
Sbjct: 245 LGKSTYPSLM--------------------------------------GLDDARTKALDL 266
Query: 291 GQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
Q+A D+L L S+ K+L + F ++R
Sbjct: 267 YQEAVDALHMLSAKSYNTKALKALASFVIER 297
>gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 52/320 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++ + + + + + I + + Y + +GGKR+RP+L L T + + + +A
Sbjct: 3 EEIELWLKEHLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAA 62
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL++A ++ E +
Sbjct: 63 AIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK 122
Query: 128 EALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+A+ + + + + + ++ ++ K KT L +++
Sbjct: 123 NGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + + L YG NLG+AFQ+ DD+LD G+ +GK D N K T +
Sbjct: 183 AILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVY 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K D L
Sbjct: 243 --------------------------------------GIEKCNELCTEMTNKCFDILNK 264
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ ++ K L E+ F L R
Sbjct: 265 IKKNTDK--LKEITMFLLNR 282
>gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
kansasii ATCC 12478]
Length = 352
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 118/334 (35%), Gaps = 36/334 (10%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I SD + + ++ GGKRLRP+ + E G + L A+E +H
Sbjct: 21 AYIGSDYDALTAWLEDFALRGGKRLRPVFAYWGWHAVTTEEPGPEILQLFSALELLHAWA 80
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------------------ 120
L+HDDV+D S+ RRG+ A + ++ L A
Sbjct: 81 LIHDDVIDASSTRRGRPTA---HVHFAALHRERNWLGPAHQFGISAAILLGDVAQAWADD 137
Query: 121 ----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + + L L ++ +
Sbjct: 138 IVSEVGQTSLPPDAARRVRRVWSGIRTEVLGGQYLDIVAEASAASSIASAMTVATFKTAC 197
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
S L++ A + V A +G +LG+AFQL DDVL G+ GK G+D R
Sbjct: 198 YTVSRPLQLGVAAAADRPDVAAAFHQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLR 257
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAY 288
+GK T+ + A + K + + +++ +++ ++ L E R
Sbjct: 258 SGKRTVLIAEAAELAEKSDPRAASLLRSSIGTELTDTQVRELREVIAGVGGLAAAENRIT 317
Query: 289 SYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
++A +L P ++ K L ++ R
Sbjct: 318 ELTERALATLASAPINARAKAGLSQLARTATDRS 351
>gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays]
gi|194690074|gb|ACF79121.1| unknown [Zea mays]
gi|238009334|gb|ACR35702.1| unknown [Zea mays]
Length = 245
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 141/249 (56%), Gaps = 5/249 (2%)
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + ++ E ++
Sbjct: 1 MIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKL 60
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+S V A GE++Q S + D+T +DYL KTA L +A+ + +S+ +GV ++ +
Sbjct: 61 ISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICE 120
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ +YG NLG++FQ+VDD+LD+ ++GK D G T PVI A Q + +
Sbjct: 121 KMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALQSEPELRE-- 178
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
I+ ++L A ++ + + A G A +L+CLP S ++ +L +
Sbjct: 179 ---IIDSEFSDTDSLATAIELVHRSGGIRRAHELAREKGDLAIQNLQCLPRSDFRSALEK 235
Query: 313 VVDFCLQRL 321
+V++ L+R+
Sbjct: 236 MVEYNLERI 244
>gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102]
gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102]
Length = 298
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L+ + S V + + ++Y+ GGKRLRP+L LA + + E
Sbjct: 5 NELKTWQQKAQAQTELLLAHFLPYESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGE 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ AIE +H +L+HDD+ LRRGK + + T++LVGD L +Q
Sbjct: 65 ANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQ 124
Query: 117 AFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ A L++++ +A G+ L+ E
Sbjct: 125 AFDVLSRPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKT 184
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + + Q L Y LG+AFQ++DDVLD + +GK G+D
Sbjct: 185 GALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADTATLGKTAGKD 244
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N KPT ++ L A
Sbjct: 245 SDNDKPTYVKLM--------------------------------------GLQAARTYAE 266
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + + + L ++ +F R N
Sbjct: 267 TLIAEAVALIEPFGGKALR--LRQLAEFVTARKN 298
>gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
H143]
Length = 414
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 90/268 (33%), Positives = 134/268 (50%), Gaps = 12/268 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 117 PAQQRLAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVAL 176
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E LS V L EGE QL ++ ++ I K+A L S
Sbjct: 177 ARLRDPEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 236
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G
Sbjct: 237 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLA 296
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 297 TAPLLFAWRANPELGA-----LVGRKFSGEGDVQLARQIVSQSDGLEQTRALAQEYTNKA 351
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S+R LPD+ K L+E+ +R N
Sbjct: 352 IQSIRILPDTEAKTGLIEMCAKLTKRRN 379
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ I K + S ++ V KY S GK +RP+L L +
Sbjct: 1 MKKNIHKLLGSGHPLLDRVAKYYTTSEGKHVRPLLVLLMSQA 42
>gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
Length = 293
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 123/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + + +V+ + +R + + + + GGKR+RP L + M
Sbjct: 1 MLVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + + T++L GD L + A
Sbjct: 61 PLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKT 169
F +V E + E + LA+ + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ +E + + + + + + I +++ F+GGKRLRP+L + A L
Sbjct: 6 DVTEILRAGVEATDAALERLLPAPDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAARTLRR 65
Query: 60 R---GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L AIE +HT +L+HDD+ D+ LRRGK +V+G ++L GD L
Sbjct: 66 DRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQ 125
Query: 115 SQAFCMVIETKSQEALEALSLV-------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ A+ + + + + G + T E + ++
Sbjct: 126 TLAYQTLAQLRCPAPATVEIIRLIAEATGTVEGMIGGQVLDLEGEGTRPTAESVDAIHRA 185
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L ++ + AG + L +G G+AFQ+VDDVLD + +GK G+
Sbjct: 186 KTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAGK 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P + + + A
Sbjct: 246 DLATDKATWPAVF--------------------------------------GIEASRRDA 267
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L P L V F ++R N
Sbjct: 268 ARLIDEAFAALE--PYGPAADGLKTVARFLVERTN 300
>gi|149046943|gb|EDL99691.1| rCG58492, isoform CRA_a [Rattus norvegicus]
Length = 390
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/347 (14%), Positives = 119/347 (34%), Gaps = 52/347 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNVAMQVRKLVGTQHPLLTTARGFVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMK 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS-----LSKNLD 155
+GN+ +VL GDFLL+ A + ++ + +E L+ L +G ++ S D
Sbjct: 184 FGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFI 303
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K + + ++ + + ++
Sbjct: 304 KDKASDSKTFNLNSAP-------------------VVLHQEFLGRDLWIKQIGELRETIK 344
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 345 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 390
>gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
Length = 221
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M++L+ + V+ + + + E + + ++Y +F+GGKRLRP+L +A A +
Sbjct: 1 MQILKAYCQQKAALVDEALARLVPRQAGYLETVYEAMRYSLFAGGKRLRPILLMAAADAV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
RG ++ +AC +E IHT +L+HDD+ +D+ RRGK + V+G ++L GD LL+
Sbjct: 61 GGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGLLT 120
Query: 116 QAFCMV 121
AF ++
Sbjct: 121 AAFEVM 126
>gi|332259792|ref|XP_003278965.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 [Nomascus
leucogenys]
Length = 399
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDVQPFVK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
Length = 301
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/339 (20%), Positives = 119/339 (35%), Gaps = 55/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M E ++ + + + + + + ++Y GGKRLRP L AT +
Sbjct: 1 MATFEQQLKAYRQRADAALSQALDNQPFGDGPLVGAMRYGALLGGKRLRPYLVYATGRLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
A AIE IH +LLH +DD LRRG+ + +G ++L GD L +
Sbjct: 61 GCDLSALDAPAAAIECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ ++ + L + G+ L+
Sbjct: 121 LAFTLLTDSPMPGVADRDRLCMLSELAHASGVAGMCGGQALDLAAEGQRVDLAALEQIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ A + ++ L Y +G+AFQ+ DD+LD G+ ++ GK
Sbjct: 181 HKTGALIRCAVRLGALAGGNAGHAALTLLDRYANAIGLAFQVQDDILDVVGDSSKTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + K T P ++ L
Sbjct: 241 GADQQLDKSTYP----------------------------------ALL----GLDQARQ 262
Query: 286 RAYSYGQKAKDSLRCLPD--SSWKKSLMEVVDFCLQRLN 322
+A Q+A +L L + ++L + F ++R N
Sbjct: 263 KAADLQQEALRALTELEQQHNLNTQALKSLASFIIERDN 301
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/304 (21%), Positives = 114/304 (37%), Gaps = 50/304 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + + ++Y + GGKR+RP+L A + + + +ACA+E IH +L+HDD+
Sbjct: 35 PERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPC 94
Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
LRRGK + + + T++LVGD L + AF ++ + + LA
Sbjct: 95 MDDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGLLAMAS 154
Query: 145 LRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ + + + KT L ++ + + V + L
Sbjct: 155 GSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDR 214
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y G+ FQ+VDD+LD + +GK G+D + KPT +L
Sbjct: 215 YAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPTYVSLL---------------- 258
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
+ D A +A +L L + L + ++
Sbjct: 259 ----------------------GVADARRLAQDMLAEALAALEPL--GARAGHLAALANY 294
Query: 317 CLQR 320
+ R
Sbjct: 295 IVHR 298
>gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 349
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/328 (22%), Positives = 128/328 (39%), Gaps = 27/328 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I D + ++ + +GGKRLRP + E D +LL A+E +H
Sbjct: 21 AYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATEAPDDQALLLFSALELLHACA 80
Query: 79 LLHDDVVDDSALR----------------RGKVAARLVWGNQTSVLVGDFLLSQAFCM-- 120
L+HDDV+DDSA R R + +G ++L+GD L+ A +
Sbjct: 81 LVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAWADDIVL 140
Query: 121 ----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + ++ L L ++ + S
Sbjct: 141 GVDLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRP 200
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ + A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 201 LQLGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 260
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ A + K + K + ++S + + ++ AL E R + Q+A
Sbjct: 261 LLAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLRDVIESVGALAAAEQRIATLTQRA 320
Query: 295 KDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+L P +++ K L E+ R
Sbjct: 321 LATLAAAPINTAAKAGLSELAKLATNRS 348
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1]
Length = 296
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 57/327 (17%)
Query: 10 KDMEKV-NFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
K M +V + + + E + + + Y SGGKRLRP++ + A + + +
Sbjct: 9 KYMAQVVEQELSRYLPRKDEFPSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVI 68
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
AC IE IHT +L+HDD V+D+ RRGK ++G+ ++L GD LL+ AF + +
Sbjct: 69 PTACGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAK 128
Query: 124 TKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ ++V G ++ DV+ + ++ KT L
Sbjct: 129 NSKISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLM 188
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
S + + +AG + +K +G LG+ FQ+VDD+LD +G +GK +G D +N K
Sbjct: 189 SVSFWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKK 248
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T + + + +
Sbjct: 249 NTFVNLF--------------------------------------GFNKSVEIVNNLSLE 270
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
AK + ++ +++ DF +R
Sbjct: 271 AKQLISNYNNN---DFFIQLTDFISKR 294
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 132/333 (39%), Gaps = 53/333 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ + V + + + E++ + + Y + +GGKRLRP+L LAT
Sbjct: 6 DLQTFMKDRKKLVEDALFSYMNAVEAPEVLLESMNYSLKAGGKRLRPLLVLATLKSFGKP 65
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +ACA+E IHT +L+HDD+ RRGK V+G ++L GD LL+ +F
Sbjct: 66 EELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDALLTHSF 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIKSKT 169
++ + + + + + +D ++ ++KT
Sbjct: 126 EVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEYIHRNKT 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L ++ +++ L+ + +LG+AFQ+ DD+LD G+ ++GK +G D
Sbjct: 186 GKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAKIGKPVGSDT 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T P +L+ + +
Sbjct: 246 LNEKVTYPSLLSMNG--------------------------------------AKEKLEY 267
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++AK L +P L ++ D +R +
Sbjct: 268 HIKEAKRILEEIP--LESDLLGQLCDLIAKRDH 298
>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 70/319 (21%), Positives = 113/319 (35%), Gaps = 53/319 (16%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + + ++Y GGKRLRP L + +A + D +L+ A+E IH
Sbjct: 31 DELMTDEI-ARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFGIDRDAALLVGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF +V +
Sbjct: 90 CYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHTDPTVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ LA + + D D + + KT L +++
Sbjct: 150 LMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVAKLQQMKTGALLRYGCVAGAIL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD + +GK G D GK T L
Sbjct: 210 GQANAEQYRALDDYGRALGEAFQIADDLLDVESDAEALGKPAGADAALGKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A +L
Sbjct: 267 -----------------------------------GIDGAKQRLRDLIARADQALAPF-- 289
Query: 304 SSWKKSLMEVVDFCLQRLN 322
L F +R N
Sbjct: 290 GERGDVLRAAARFVAERKN 308
>gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
Length = 324
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 88/319 (27%), Positives = 159/319 (49%), Gaps = 10/319 (3%)
Query: 12 MEKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ ++ L+ + I S + + V YL+ GGKRLRP L L + + V
Sbjct: 4 ISELQLLLDQEINTYSYPSSPRNLYEPVSYLLGLGGKRLRPALLLLATDLFGGDVEKAVK 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A AIEF H +L+HDD++D + LRRGK W + T++L GD +L +A+ ++ E ++
Sbjct: 64 PAMAIEFFHNFSLMHDDIMDKAPLRRGKPTVHEKWSDSTAILSGDIMLIEAYKLICEVEA 123
Query: 127 ---QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L+ + ++ + EG+ ++ K V+ E+Y+ +I+ KTAVL AL++ ++I
Sbjct: 124 VKLPACLKIFNTISTEVCEGQQMDMNFEKEEFVSIEEYIEMIRLKTAVLLGGALKIGAVI 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + ++ + +G LG+AFQL DD+LD G+ + GK +G D + K T +I A +
Sbjct: 184 ADASENDQELINDFGTKLGVAFQLQDDILDVYGDPEKFGKQVGGDIISNKKTFLLIKALE 243
Query: 244 RGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K + +N+ I+ ++ + + I E + +Y +A L +
Sbjct: 244 LAKDDLKKELEDLLNNQIITADDKVAQVTAIYNTLNIRKIAEEKMLNYAAEALHCLEKIN 303
Query: 303 -DSSWKKSLMEVVDFCLQR 320
+ K+ L + + R
Sbjct: 304 VPTERKEVLRDFASKLITR 322
>gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
Length = 294
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/334 (20%), Positives = 124/334 (37%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L+ ++ E+++ + + + + ++Y + GGKR RP L AT +
Sbjct: 2 IEALKSYQQRNNEQLDAWLDHY-PFQEQRLIEAMRYALLLGGKRARPFLVYATGQIFGCT 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + AF
Sbjct: 61 NEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L EE
Sbjct: 121 TILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEELERIHRHKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + L++Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 181 GALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILDIVGDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A
Sbjct: 241 VELNKSTYPALL--------------------------------------GLEGAQQKAA 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A +L +P + + L + + ++R N
Sbjct: 263 QLFEEALCALEAIPYN--TQLLEDFARYVIERNN 294
>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
Length = 296
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/336 (20%), Positives = 124/336 (36%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M +L + + + + K I + + + + GGKR+RP L ML
Sbjct: 1 MTLLLKTLSQYQSRTDQQLTKYIDLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGDML 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ +ACA+E +H +L+HDD+ LRRG+ +V+G ++L GD L S
Sbjct: 61 GSQLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDALQS 120
Query: 116 QAFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF ++ + + + A + + G+ L+
Sbjct: 121 LAFDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIHRA 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ +A + G+ + +Q L +Y +G+AFQ+ DD+LD + +GK G
Sbjct: 181 KTGALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSDSQTLGKPQG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K T P +L L +++
Sbjct: 241 SDINANKSTYPALL--------------------------------------GLEQAQHK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A D+L LP L + + + R N
Sbjct: 263 MQLLYEEAIDALNKLPY--DTHILAQFALYIISRKN 296
>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
Length = 301
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 59/341 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + S E + ++Y + +GGKRLRP L +
Sbjct: 1 MYEFTTLLAKHAHSVERRLDTLLSDQVQNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+ + + + + +A A+E +H +L+HDD+ LRRG+ + + T++L G
Sbjct: 61 SGALFDIPAEYCLDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDY 161
+ LL+ AF ++ S E + T + G++ L K +
Sbjct: 121 NALLTFAFEIIAHKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISI 180
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + KTA L S A + ++I + + L ++G LG+AFQL DD+LD +
Sbjct: 181 LTLQHMKTAALISFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTEIL 240
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D K T + +
Sbjct: 241 GKTAGKDETAQKATFVRLY--------------------------------------GIQ 262
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+T+ + KA+ L LP + K L + F R N
Sbjct: 263 ETQKKRDGLIAKAEALL--LPFGTKAKPLQQAAHFSATRKN 301
>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
Length = 297
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 56/333 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY-R 60
E L K++ +L+ + E+ + + ++Y + +GGKRLRP+L L M
Sbjct: 6 EQLLKAYCAKIDEQLLRFTENKPELQSVVLEAMEYSLTAGGKRLRPILVLEFYRMCGGED 65
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +AC++E IHT +L+HDD +D+ RRGK + + ++L GD L + AF
Sbjct: 66 IDKMIKVACSVELIHTYSLIHDDLPCMDNDDFRRGKPSCHKAFSEDIALLAGDALNTLAF 125
Query: 119 CMVIETKSQEALEALSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + + + A + V T + + L +V + + L+ ++S
Sbjct: 126 EVITDCAMEGTISAETAVMLVSVLSKAIGTDGMIGGQVIDLETENEVIDIETLNRLQSCK 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A V ++ + A Y +G AFQ+VDD+LD G E+GK IG D
Sbjct: 186 TGALIEAACVMGVVLSGKMEYIPAAADYAQAMGRAFQIVDDILDVTGTFEELGKPIGSDS 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T +L L + +A
Sbjct: 246 EQHKNTYVSLL--------------------------------------GLQRSRQKAAQ 267
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L+ ++ + E+ L+R +
Sbjct: 268 LTVTALGALKNFENNEFV---FELTRELLERRS 297
>gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Burkholderia rhizoxinica HKI
454]
gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC
2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC
2.5.1.29) [Burkholderia rhizoxinica HKI 454]
Length = 298
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 52/329 (15%)
Query: 6 DLTLKDMEKVNFLILKRIC-SDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + + + + +DVE + ++Y + GGKR+RPML A L G
Sbjct: 10 EWVRDVLARTEVALSAVLPPADVEPMQLHQAMRYAVLGGGKRVRPMLCHAAGQALGAPGQ 69
Query: 63 NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC- 119
ACA+E IH +L+H +DD +RRGK + + T +LVGD L SQAF
Sbjct: 70 RLDAAACALELIHVYSLVHDDLPSMDDDDMRRGKPTVHVQYDEATGLLVGDALQSQAFIA 129
Query: 120 ------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ A + + +A G+ L+ + A+L
Sbjct: 130 LASDALEAHRQAALMRELACASGSLGMAGGQAIDLASVGTRLSRTQLETMHRMKTGALLR 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+A + G+ + L +Y +G+AFQ+VDD+LD + +GK G+D N K
Sbjct: 190 AAVKMGALCGDGLSADIEAGLDAYAKAVGLAFQVVDDILDVTADSATLGKTAGKDAANDK 249
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT I+ L + A +
Sbjct: 250 PTY----------------------------------VSII----GLQASRELAAQLRRD 271
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L L + + L ++ D ++R+N
Sbjct: 272 AHAALAPLGERGLR--LAQIADLVVERMN 298
>gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
Length = 535
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G NLG+ FQ+VDD+LDY GK D + G T PV+ A+++ K
Sbjct: 412 CYDFGRNLGLCFQIVDDMLDYTSSDAAFGKPSQADLKLGLATAPVLFAWRKEPKLGA--- 468
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
I +++ A + + T A Y +A SLR LP+S + +L +
Sbjct: 469 --LIARKFSEPGDVEIARRAVERYDGVAQTRKMAQDYCNRALTSLRVLPESDARSALELL 526
Query: 314 VDFCLQRLN 322
L R N
Sbjct: 527 THSVLTRTN 535
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +M + I + I S + V Y + GK +RP++ L + L
Sbjct: 103 SIVSHEMSNMAKSIAQLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLLLSKALSAIP 158
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 135/332 (40%), Gaps = 52/332 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M D K E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MVNFMDRIKKMGEEIELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLY 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 61 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL + + + + + ++ ++ K K
Sbjct: 121 EAMNIMFEYSLKNGEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 181 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 241 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 263 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 292
>gi|114608723|ref|XP_001146753.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1 [Pan
troglodytes]
Length = 399
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
Length = 285
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 39/305 (12%)
Query: 15 VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V I I D + + +++ +GGKR+RP++ L ++ + + A AIE
Sbjct: 12 VESGINSFIDQMDESSLKKMAEHVCNTGGKRIRPIILLLSSEICSGSYQQSLNAALAIEL 71
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L+HDD++D +RR +A +G ++L GD+L+++ F + + +
Sbjct: 72 MHSASLIHDDLLDQGLVRRNLPSAPEKFGPSRALLCGDYLIAKCFEFISPYGEKVVRDFG 131
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
L + E +Y I KTA LF+ + + + G + +
Sbjct: 132 KAGMDMAEGEVL--DLRLDKDNFGENNYFECIYKKTASLFAISASIGAYTGGADEVLAER 189
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G LG A+Q+VDD+L++ G++ + TLP + +
Sbjct: 190 FNFFGNCLGTAYQIVDDILEFLE------VVEGKESKFTSETLPHVYMKNMSKEE----- 238
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
A+ + AKD+L + ++ L ++
Sbjct: 239 -------------------------AIEKSTDAVKLRVNAAKDALLTFNECPAREKLFQI 273
Query: 314 VDFCL 318
D+
Sbjct: 274 TDYIT 278
>gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/335 (22%), Positives = 123/335 (36%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEM--IPDVVKYLIFSGGKRLRPMLTLATALML 57
M L+ + +E+ ++ + S V + + ++Y GGKRLRP+L LA + +
Sbjct: 1 MNDLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
A+E IH +L+HDD+ LRRGK + +G T++LVGD L +
Sbjct: 61 NQVQAACEAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF ++ + L +V +A G+ L E
Sbjct: 121 LAFDILSTETELSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLK 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + + L Y LG+AFQ++DDVLD + +GK G+
Sbjct: 181 TGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTAGK 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT ++ L A
Sbjct: 241 DADANKPTYVKLM--------------------------------------GLQAARAYA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A D+L+ D+ L + F + R +
Sbjct: 263 EQLVAQAIDALQTF-DTRA-DHLRTLAQFVVARKS 295
>gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 367
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 81/352 (23%), Positives = 129/352 (36%), Gaps = 45/352 (12%)
Query: 14 KVNFLILKRICS----------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-- 61
+V+ + + S ++ +P ++ + GGK +RP +
Sbjct: 16 RVDAALSAFLDSQGAALIAMSPELAPLPTALREFLD-GGKLMRPGFCYWGWRGVLGDSAT 74
Query: 62 ----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------------ 105
+ V A ++E + + L+HDD +DDS RRG A +
Sbjct: 75 AQEEEGIVHAAASLELLQASALIHDDYMDDSDTRRGMPAIHRRFAAAHREAAWEGSDERF 134
Query: 106 ----SVLVGDFLLSQAFCMVIETK---------SQEALEALSLVACTLAEGELRQLSLSK 152
++L+GD L+ M + + V L Q
Sbjct: 135 GAAAAILLGDVCLTWCDEMFAGNGLPAERTAAARRYFDVMRTEVMAGQYLDVLAQAHGLD 194
Query: 153 NLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ + VI+ K+A L V +++AG V A +YG+ LG AFQL DDV
Sbjct: 195 EPERAAQRAQTVIRFKSAKYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLRDDV 254
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKA 270
L G+ GK G+D R GK TL V LA R + + + +
Sbjct: 255 LGVFGDPAATGKPAGDDLREGKQTLLVALAAARADSPAAIKTLRAELGNPDLDTAGVAEL 314
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
I+R AL D E R + +A+ +L P D+ K L E+ R
Sbjct: 315 QDIIRSTGALDDVETRIAALTDQARAALDAAPIDAEAKTVLGELAVMATARK 366
>gi|388220|emb|CAA48735.1| unnamed protein product [Escherichia coli]
Length = 131
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ A GT + +
Sbjct: 5 QDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIR 64
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ I G L+ M +L T RA KA +L+ LPD+ W+++L+ +
Sbjct: 65 TAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLA 123
Query: 315 DFCLQR 320
+QR
Sbjct: 124 HIAVQR 129
>gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
Length = 346
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 13/277 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M +V+ + + + + GGKR+RP+L L A + + + AI
Sbjct: 35 MAEVDAPARDL----DRYLYEPLAHFTAGGGKRVRPVLALLGAEAVGGCAEQALSSGVAI 90
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +A L+HDD+ D S LRRG+ G ++ GD L++ F +V+ S
Sbjct: 91 ELFQSAALIHDDIADASELRRGEPCLYRTHGEGLAINAGDLALTRVFEVVLNDASLPGDR 150
Query: 132 ALSLVACTLAEGELR--------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSL 182
L ++ + + DVT DYL++I+ KTA A+ + +L
Sbjct: 151 RLRVLDELVRMERHTLEGQALDLGWARDGRWDVTSSDYLYMIEGKTAWYTVASPLRIGAL 210
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG + L G G+AFQL DD+L+ G+ + GK+ D GK TL V+ A
Sbjct: 211 AAGAADEAACELVELGRPAGLAFQLQDDLLNLVGDASAQGKDFRSDITEGKRTLAVVWAL 270
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ + + + L +A ++ +
Sbjct: 271 EHLDDEPHRELVDLLESKTTNPDKLARAVELIEQAGG 307
>gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 136/332 (40%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL + + + + ++ ++ ++ + K
Sbjct: 117 EAMNIMFEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 AGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1]
Length = 294
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/333 (21%), Positives = 130/333 (39%), Gaps = 56/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M++ L + ++N ++ + + + + Y + +GGKRLRPML T +
Sbjct: 1 MIDKLIAEKAARINDIVESYLPPADGFNRTVCEAMAYSVEAGGKRLRPMLMEETYRLFGG 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + AIE IHT +L+HDD+ D+ RRG+ + +V+G ++L GD LL+ A
Sbjct: 61 KSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDALLNYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---------IKSK 168
+ + A + + + V E ++K
Sbjct: 121 YETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYVYENK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + +++AG + A+ ++G+AFQ+ DD+LD G+ +GK D
Sbjct: 181 TGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDVCGDSALLGKPTLSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
NGK T I + ++
Sbjct: 241 EENGKVTYVTIH--------------------------------------GIDESRRYVT 262
Query: 289 SYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
++A L + D+ + L E+V + + R
Sbjct: 263 ELSERAVRELEEIGGDNEF---LKELVIWLINR 292
>gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial
[Apis mellifera]
Length = 310
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/290 (18%), Positives = 116/290 (40%), Gaps = 8/290 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ E++ + Y++ GK++R L A L+ + D + I+ +H A+LL DD+
Sbjct: 17 EDEILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDIIQLLHNASLLIDDIQ 76
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G +++ ++ + A V+ E ++ L G+
Sbjct: 77 DNSVLRRGIPVAHNIYGVASTMNAANYAIFIALEKVLALNHVEGIQIYLEQLLELHRGQG 136
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
++ N E + + ++ + + + ++ LG+ F
Sbjct: 137 MEIYWRDNYICPTEAAYKQMTIQKTGGL---FNLAVRLMQLFSECKEDFVPLTSILGLYF 193
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + E K ED GK + P+I A + + + + +E
Sbjct: 194 QIRDDYCNLSSEEYVDNKGYCEDLSEGKYSFPIIHAIRSHPED--RQIINILRQRTKDIE 251
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ ++ + + T +KA+D + L + L++V+D
Sbjct: 252 VKRYCVKLLEKFGSFTYTRTLLEELDKKARDEIARLGGNP---LLIQVLD 298
>gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 347
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 102/295 (34%), Gaps = 16/295 (5%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LR L LAT + A +E H A L+HDD+ D+S RRG +
Sbjct: 51 GKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDIQDESEQRRGGRTLHAEY 110
Query: 102 GNQTSVLVGDFLLSQAFCMVIETK----SQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++ VG+ A + + S A + + Q +
Sbjct: 111 GVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIEIGWIRDN 170
Query: 158 EEDYLHVIKSKTA------VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
D + L+A + + L YG LG AFQ+ DD
Sbjct: 171 VCDLDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDA 230
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKK 269
L+ G+ GK I D GK TL +I +R T E+ + + ++
Sbjct: 231 LNLTGDYARYGKEIAGDLWEGKRTLILIDFMRRCTPEERERLVRLLSRTRAERTDAEVRW 290
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAK----DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + A A+ +L D+ + L+E+ D+ ++R
Sbjct: 291 LHGRLLAYDCVESARRSARDLALAARREGERALGDAADTEDGRFLLELTDYVVER 345
>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
Length = 297
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/336 (20%), Positives = 115/336 (34%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E+VN I + + E + + Y GGKR+RP+L ATA L
Sbjct: 2 DFKQALAHYQERVNATIERYLPDPQQAPEALHSAMHYSATGGGKRVRPLLCYATAEALGQ 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+H +DD LRRG+ + + T++L GD L + A
Sbjct: 62 SAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F ++ ++ A L A + + + + A
Sbjct: 122 FDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKRMHALK 181
Query: 178 EVSSLIAGVQN-----------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ + A VQ Q L Y +G+AFQ+ DD+LD + +GK G
Sbjct: 182 TGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISDTQTLGKTQG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D + KPT +L L +
Sbjct: 242 ADEAHNKPTYTSLL--------------------------------------GLEGAKQH 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +A L + L + D+ ++R +
Sbjct: 264 AIDTHAEAIACLEPF--GERAQLLKNIADYIVERAH 297
>gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
Length = 290
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 11/236 (4%)
Query: 13 EKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69
E++ + K + +DV+ + D + Y + +GGKRLRP LTLAT ML D+ + A
Sbjct: 10 EQIENYLSKSLAADVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAAS 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V +
Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQWVADNHLP 129
Query: 128 EALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + ++ +T ++ + KT L A+
Sbjct: 130 ANIRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGG 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P
Sbjct: 190 IMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGKAVHKDADEQKNTYP 245
>gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb01]
gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb01]
Length = 533
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 271 PSQRRLAEITEVIHTASLLHDDVIDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVAL 330
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E ++ V L EGE QL ++ + I K+A L S
Sbjct: 331 ARLRDPEVIELVATVIANLIEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSASLIS 390
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 391 KSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 450
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 451 TAPLLFAWRGHPELGA-----LVGRKFRREGDVQLARQIVAQSDGLEQTRALAQEYTDKA 505
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+S+ LPDS K L+E+ QR
Sbjct: 506 IESISILPDSEAKAGLIEMCAKLTQR 531
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + K+++ + I + + S ++ + KY S GK +RP+L L +
Sbjct: 149 IDPLR-IVGKELKFMKKNIQQLLGSGHPLLDRIAKYYTRSEGKHVRPLLVLLMSQATAIA 207
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + E + ++ D+
Sbjct: 208 PKSPRQVQSVSESGINEAITSPAILADTN 236
>gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 346
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 15/323 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI----FSG-------GKRLRPMLTLATALMLEYRG 61
V+ + + E + + Y G GK +RP+L L A + R
Sbjct: 22 ALVDPALRAAVDRLPESMRSIAGYHFGWWDEHGVPTGADAGKAIRPVLVLLAARAVGGRA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM- 120
++ + A A+E +H +LLHDDV+D A RR + A V+G +VL GD L++ A +
Sbjct: 82 EDALPAAVAVELVHNFSLLHDDVMDGDATRRHRPTAWAVFGVNAAVLAGDALMTLALDVL 141
Query: 121 --VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + LS L +G+ L + +V + + + + KTA L A
Sbjct: 142 AGSGHPAAARGIVLLSAAVQELLDGQSSDLGFEERDEVGVAECVRMAEGKTAALLGACCS 201
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L G L +G G+AFQ VDD+L G+ GK + D RN K +LPV
Sbjct: 202 LGALFGGGSADQVGELGLFGERTGLAFQFVDDLLGIWGDPAATGKPVHSDLRNRKKSLPV 261
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + G+++ L++A ++ + A + RA +A+ L
Sbjct: 262 VAALASRSQAGRELAGLYRGRGELAGSALEEAAGLVEQAGARAWGQRRADELLAQARTHL 321
Query: 299 RCLP-DSSWKKSLMEVVDFCLQR 320
R D + L V +R
Sbjct: 322 RAAGVDPVAARELDAVAVLMTRR 344
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/330 (22%), Positives = 129/330 (39%), Gaps = 60/330 (18%)
Query: 14 KVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
VN + + + + + ++Y + +GGKR+RP L LA ++ R + A A+
Sbjct: 68 AVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAMAPAAAV 127
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD LRRGK +++G +VL GD LL+ AF + S
Sbjct: 128 EMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALAFQHMASVDSYPP 187
Query: 130 LEALSLVACTLAEG----------------ELRQLSLSKNLDVTEEDYLHVIK-SKTAVL 172
+ + ++ L ++ + + D L I KTA L
Sbjct: 188 DVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIHLHKTAAL 247
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ + ++I G + L+ Y ++G+ FQ+VDD+LD E+GK G+D +
Sbjct: 248 LEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASD 307
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P +L L + A
Sbjct: 308 KTTYPKLL--------------------------------------GLEKSREFAEKLLS 329
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
AK+ L L+ + ++ R N
Sbjct: 330 DAKEQLAYFEKEKA-APLLYLANYIAYRQN 358
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + EAL + + + + ++ ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEEALKACYTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080]
gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080]
Length = 346
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/325 (20%), Positives = 122/325 (37%), Gaps = 22/325 (6%)
Query: 17 FLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + + + GG+ RP L +ATA + + + A +IE +
Sbjct: 24 AELKNWLPKGDPEDYLYGPMSDYPMRGGRMFRPSLCIATAKVFGASLEQVIPAAVSIELL 83
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A L+HDD+ D+S RRGK G ++ GD L + +I + +++
Sbjct: 84 HNALLIHDDIEDESDERRGKPTLHKKIGTPLALNAGDSLAFLSLRPIIRGSASMGSDSIV 143
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS----- 189
+ ++ Q + + I+ A L+ + + +
Sbjct: 144 RILE--EFDQMAQQTAEGQALDLGWRRDNHIELCEADYLKMVLKKTCWLTTLFPIRLGAL 201
Query: 190 -------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+L ++ LG AFQ+ DDVL+ G GK +G D GK TL ++
Sbjct: 202 IGSGGRANLDSLFNFAFFLGAAFQIQDDVLNLIGNHERYGKELGGDLLEGKRTLMLVNLL 261
Query: 243 QRGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + E+ K+ ++ S ++ M E + + A+ A
Sbjct: 262 ELSSSSERVRIKAILDTPRDARSDASVSWLRSAMIERGCIEYAKELAHGLAGAASHEFDK 321
Query: 301 ----LPDSSWKKSLMEVVDFCLQRL 321
LP+SS K L ++ + ++R
Sbjct: 322 TFKELPESSDKAFLSKLPSWVIERS 346
>gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 309
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/330 (21%), Positives = 120/330 (36%), Gaps = 58/330 (17%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ V ++ + + + + + ++Y GGKRLRP L + TA + G+
Sbjct: 18 DAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETARLFGVEGEGV 77
Query: 65 VLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
A A+E IH +L+HDD+ D+ LRRG+ + T++LVGD LL+ AF ++
Sbjct: 78 TRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDGLLTYAFDVLA 137
Query: 123 ETKSQEALEALSL----------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + + L + T E + + KT L
Sbjct: 138 DPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVIRLQSMKTGAL 197
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
++ ++I R AL +YG LG AFQ+ DD+LD + +GK G+D
Sbjct: 198 LHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEADEATLGKRAGKDAGRN 257
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T + L D R
Sbjct: 258 KAT--------------------------------------LVAALGLEDARKRRDRLAA 279
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L +L E F +R +
Sbjct: 280 EAIAALDLFSQGLDAATLKEAAHFVAKRAS 309
>gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Cuz20]
Length = 307
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNGK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNPHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 414]
gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 414]
Length = 297
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 85/311 (27%), Positives = 162/311 (52%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDDLIKQFLQ---ELDYEPILNMLLNVKSGKKLRSKLLLAIAE----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+IE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 SIELIHLASLLHDDIIDESELRRGSRSVNAEFGTKNALMLGDILYSKAF-YELSKVDTRF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL ++L + ++ +E YL +I +KTA+L A+ +++A +
Sbjct: 113 ASIISDAVVKLAIGELMDVNLGEKFNINKEAYLKMIYNKTAILIEASARCGAILARLHEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMSDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + I E +AL + A +Y +KA ++++ ++
Sbjct: 230 RVYLQTLFKK-DLNENEKEWLKIKFEEQKALEKAIFEAKTYAKKANEAIKKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 305
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I D ++Y + +GGKRLRP+L T + GD AIE IHT +L+HDD+
Sbjct: 40 IFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDN 99
Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139
LRRGK V+G VL GD LL+ AF + + A
Sbjct: 100 DSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTVRVTEAMRILARKAGV 159
Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ G++ + K ++ + I KT L AA+ + +++AG +++
Sbjct: 160 FGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTVEN 219
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G+AFQ+ DD+LD G+ +GK IG D RN K T
Sbjct: 220 VAKKIGLAFQIQDDILDVIGDEATIGKPIGSDERNEKCTFVTFA---------------- 263
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVD 315
+ ++ +A + L LP +K + L E+++
Sbjct: 264 ----------------------GIEKSKEEVKRLTDEAIEELNSLP---YKNEFLNELLN 298
Query: 316 FCLQR 320
+ + R
Sbjct: 299 YLVYR 303
>gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
Length = 296
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 57/334 (17%)
Query: 6 DLTLKDMEKV----NFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
DL ++V + + + + + ++Y GGKR+RP+L ATA +
Sbjct: 3 DLLSDAFDQVQQDVDAAFDAYLPVPQDTRGRLVEAMRYAAIGGGKRVRPLLVCATAKLFG 62
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D V CA+E IH +L+H +DD LR GK V+ T+VL GD L +
Sbjct: 63 VDRDAAVAAGCAVEAIHAYSLIHDDLPCMDDDDLRHGKPTLHKVYDEATAVLAGDCLHAL 122
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSK 168
AF ++ + + TLA+ + + D + K
Sbjct: 123 AFDILTMPGISNDPFVRAELVATLAKASGHEGMAGGQMMDIVSDEEEYDIRQVTRLQQLK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L +A++E+ +++ + R L++Y ++G+AFQ+ DD+LD G+ + GK + +D
Sbjct: 183 TGALLAASVEMGAVLGKLPPEGRTHLRAYARDIGLAFQIADDLLDVEGDETKAGKALRKD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T ++ +A
Sbjct: 243 EGQGKQTFVTLM--------------------------------------GRDAARAQAE 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L + L+E+ F +R +
Sbjct: 265 MLIDQAGQHLASY--GEDARVLVELAHFVAKRDH 296
>gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
Length = 329
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/290 (21%), Positives = 120/290 (41%), Gaps = 9/290 (3%)
Query: 12 MEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHV 65
+++V+ L+ +++++ D+++ GGK +R L LA+A R + +
Sbjct: 6 LDRVHTLLPAHHARPEIQLLYDMMRDYPARGGKGIRAELLLASARAHGVREGTPAWEQAL 65
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA +E L+HDD+ DDS RRG+ A G ++ GD L + + V
Sbjct: 66 WLAATVELFQNWVLIHDDIEDDSEERRGQPALHRTHGVPLALNAGDALHAYMWAAVARAN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A E + + AEG+ L+ ++ + ++ + +
Sbjct: 126 VPGAFEEVLQMIHRTAEGQHVDLAWVEHGRWDLTPADYLDMVRLKTAYYTVVVPLRLGAL 185
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT--LPVILAF 242
+ A ++ G+ LG AFQ+ DDVL+ + GK IG D + GK T + L
Sbjct: 186 AAGATPSAAFEAAGVALGAAFQIRDDVLNLTADAGVYGKEIGGDLQEGKRTLMVLDWLER 245
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
++R + S E+ ++ +R + A+ + A + +
Sbjct: 246 APASERAAFLTYMQQPRAQKSPEDTRRILDWLRTSGAVDRAQAVADEHAR 295
>gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica]
gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase,
mitochondrial; Short=HPS; Flags: Precursor
gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica]
Length = 452
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
LA +E IHTA+LLHDDV+D+SA RRG + +GN+ ++L GDFLL +A
Sbjct: 187 NGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVAFGNKMAILAGDFLLGRA 246
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQ---LSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++ E +E LS L EGE Q + + + + + I S
Sbjct: 247 SVAIARLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTAS 306
Query: 175 AALEVSSLIAG---VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ A +N + A +G NLG+ FQ+VDD+LDY + +GK G D +
Sbjct: 307 LMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKL 366
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
G T PV+ A+++ + + G ++++A ++++ L T A Y
Sbjct: 367 GLATAPVLFAWEKYPELGDMIKRKFDGPG-----DVERARFLVQQADGLSRTRELAQKYC 421
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A +L LP S +++L + + R
Sbjct: 422 DEAVANLDLLPYSESREALRNLTMKMMNRS 451
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ ++M + I I S + V Y S GK +RP++ L + L +
Sbjct: 71 SIVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQSEGKHVRPLIVLLLSRALSAIPE 127
>gi|148673066|gb|EDL05013.1| mCG2750, isoform CRA_b [Mus musculus]
Length = 390
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/347 (14%), Positives = 119/347 (34%), Gaps = 52/347 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E LS L G ++ S D
Sbjct: 184 FGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFI 303
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K + + ++ + + ++
Sbjct: 304 KDKASDSKTFNLNSAP-------------------VVLHQEFLGRDLWIKQIGELRETIK 344
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 345 AGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 390
>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 305
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 127/332 (38%), Gaps = 57/332 (17%)
Query: 6 DLTLKDMEKVNFLILKRICSDVE-------MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L + ++ + + + + + ++Y GGKRLRP+L A A +
Sbjct: 12 SLLKDALVRIQQEVDACFDATLPVPEDPRARLYEAMRYSAIGGGKRLRPLLVTAVASLFG 71
Query: 59 YRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V + A+E IH +L+HDD +D+ +LR GK L + + T+VL GD L +
Sbjct: 72 VDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAGDALQAL 131
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSK 168
AF ++ + + TLA + + + + + K
Sbjct: 132 AFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVTRLQQLK 191
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L +AA+E+ +++ V R L+ Y N+G+AFQ+VDD+LD G+ GK + +D
Sbjct: 192 TGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGDEEAAGKALRKD 251
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T +L + +A
Sbjct: 252 AEAGKETFVSLL--------------------------------------GIDRARSQAR 273
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A + L + L V + ++R
Sbjct: 274 VLVDQAIEFLNSY--GEEAELLRAVARYIVER 303
>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
Length = 300
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 57/337 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D ++V + + + + ++Y + GGKR+RP+L A + +
Sbjct: 4 AFKDWVKACQQRVEKAAENNLPQEALIPQKLHSAMRYSVIGGGKRVRPLLVYAVGQIYDA 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+N L A A+E +H+ +L+HDD +D+ LR GK +G ++L GD L +A
Sbjct: 64 DPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHTAFGEAVAMLAGDALQPEA 123
Query: 118 FCMVIETKSQEALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ TK + + G+ LS+ N +T E+ + KT
Sbjct: 124 FLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEELRLMHSMKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ + + S L+ YG +G+AFQ+VDD+LD G+ E+GK G+D
Sbjct: 184 ALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTAELGKTAGKD 243
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
KPT +L L + A
Sbjct: 244 ALGDKPTYVSLL--------------------------------------GLEKAKELAE 265
Query: 289 S---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KA + L D K+ L+E+ DF ++R +
Sbjct: 266 EQYLIAAKAVEGLS--EDLDGKERLIEIADFIIRRTH 300
>gi|209525924|ref|ZP_03274458.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
gi|209493601|gb|EDZ93922.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
Length = 132
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG N+G+AFQ+VDD+LD+ G +GK D ++G T P + A EK F +
Sbjct: 10 YKYGRNIGLAFQIVDDILDFTGSTESLGKPAASDLKSGNLTAPTLFAL-----AEKPFLE 64
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ I+ +L++A +++E+ + + A + Q A + ++ LP S +++L+E+
Sbjct: 65 TLIDREFAQDGDLEQAIALIQESSGIEKSRELAIHHAQVAVEHIKQLPPSESRQALVELG 124
Query: 315 DFCLQRL 321
D+ + R+
Sbjct: 125 DYVVSRI 131
>gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1]
gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1]
Length = 295
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/305 (20%), Positives = 123/305 (40%), Gaps = 39/305 (12%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V I + I + + +V+++ SGGKR+RP++ L + + + A A+E
Sbjct: 22 VEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEM 81
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L+HDD++D +RR +A +G ++L GD+L++++ + + +
Sbjct: 82 MHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIAFISPYGEKVIQDFG 141
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
L ++ E DY I KTA LF+ + + + G + + +
Sbjct: 142 KAGMDMAEGEVL--DLKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAER 199
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G LG A+Q+VDD+L++ G++ + TLP I +
Sbjct: 200 FSHFGNALGTAYQIVDDILEFLE------VVEGKESKFTSETLPHIYMKSTSKEE----- 248
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
AL + + AK++L + + L ++
Sbjct: 249 -------------------------ALKKSIDCVKLHVAAAKETLETFRECPARDKLFQI 283
Query: 314 VDFCL 318
D+
Sbjct: 284 TDYIT 288
>gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
Length = 377
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 81/345 (23%), Positives = 138/345 (40%), Gaps = 26/345 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTL 51
+ L + V ++ + + V Y GGK +RP L L
Sbjct: 32 DVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALAL 91
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+A + V A A+E +H +LLHDD++D RR + V G ++LVGD
Sbjct: 92 ISAEVTGASAGTGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGD 151
Query: 112 FLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
L + A + + ++ A L+ L +G+ + +S VT E+ L + +K
Sbjct: 152 ALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVTVEECLEMEGNK 211
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ GK D
Sbjct: 212 TGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSD 271
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF----------IIMREN 277
R K +LPV+ A G + D + +++ + ++ E
Sbjct: 272 LRQRKKSLPVVAALAAGGPASDKLAQLLAADAAATGPDSVPQEEFSEEEFAARAALIEEA 331
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
T A A +L +P + S + + DF + R
Sbjct: 332 GGREWTSQEARRQFDIAIGALDSVPMPPHVRASFVALADFVVVRK 376
>gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 327
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/323 (20%), Positives = 131/323 (40%), Gaps = 15/323 (4%)
Query: 13 EKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
E + +L+R+ ++ +++ GGK LR L LATA + +
Sbjct: 3 EAIRRYLLERLPDPKAAPRPELAQYAQLLRDYPERGGKLLRGQLLLATAQAHGAPPERAL 62
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIE 123
A A+E L+HDD+ D S +RRG+ ++ ++ GD L + + +
Sbjct: 63 PAAAALELFQNWVLIHDDIEDASEMRRGRPTLHRLYSVPLALNAGDALHAVMWRVLLEAA 122
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ E LV T L + + + + A ++A +
Sbjct: 123 YPTPVLQEFARLVETTARGQHLDLAWIEAERFDLSPEDYLEMVRQKAAYYTAVAPLKLGA 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
++ A + G+ LG+AFQ++DDVL+ G ++ GK I D R GK TL ++
Sbjct: 183 LVAGHTPHPAFEPAGLQLGVAFQIIDDVLNLEGNPDKYGKEIAGDLREGKRTLILLRFLA 242
Query: 244 RGTKREKNFWKSTINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC- 300
E+ ++ + + L +R A+ A+ ++ ++L
Sbjct: 243 AAPPAERARAEALLKTPPAEKDPAELAWLHARLRHTGAVAYAREVAHRLAREGLEALTPV 302
Query: 301 ---LPDSSWKKSLMEVVDFCLQR 320
LPD ++++E+++ ++R
Sbjct: 303 LTALPDPEAGRTVLELLEALVER 325
>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
Length = 299
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/332 (21%), Positives = 122/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+HDD+ +D+ LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 297
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/336 (21%), Positives = 132/336 (39%), Gaps = 56/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D + + ++ ++ + + + + + + + +GGKRLRPML T M
Sbjct: 2 NFKDEMKQKVAQIEIILDEYLPAQEGLQKTVLTAMNTTVKAGGKRLRPMLINETYQMFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ D AIE IHT +L+HDD+ D+ RRG+ +V+G ++L GD LL+ A
Sbjct: 62 KEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-----------LDVTEEDYLHVIK 166
+ + + + + V + + ++ E L + K
Sbjct: 122 YEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQILFIHK 181
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+KT+ L A + + +++AG ++ G +G+AFQ+ DD+LD G+ E+GK +G
Sbjct: 182 NKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEEEIGKPVG 241
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D +N K T + + L ++
Sbjct: 242 SDEKNHKTTYVTL--------------------------------------KGLERSQRD 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA D L L + F + R +
Sbjct: 264 VEDISKKAIDILEKYDKGDC--YLTNLTRFLIHRTH 297
>gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
Length = 293
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 121/321 (37%), Gaps = 53/321 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + RI S + +K+ GGKR+RP L A ML + A
Sbjct: 11 ERINQQLELRIDSLADIDPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLSTLDSCAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ LRRG+ + + T++L GD L + AF ++ E
Sbjct: 71 AIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISEPIEN 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKTAVLFSAALEV 179
+ LA + K KT L A+E
Sbjct: 131 ITPSQNLAMVRALANASGYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEF 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + A ++ RQAL + +G+AFQ+ DDVLD E+GK G D + K T P +
Sbjct: 191 AIIAAKIEGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDTDSNKSTYPKL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + A S + A +L
Sbjct: 251 L--------------------------------------GLEGAQETASSLIEDALSALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP +S + + E + ++R
Sbjct: 273 KLPYNS--QLIAEFARYIIER 291
>gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b]
gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b]
Length = 292
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 133/320 (41%), Gaps = 51/320 (15%)
Query: 14 KVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V + + I S + + D + Y + +GGKR+RP L A + +A ++
Sbjct: 13 AVELAMQELIDSSEMPKRLRDAMAYSLEAGGKRIRPALVYAVLETYGMSLERGREVAASL 72
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD LRRG+ + T++L GD LL+ AF ++ +
Sbjct: 73 EMVHTYSLIHDDLPAMDDDDLRRGRPTNHRQFDEATAILAGDALLTDAFRILTQMPLSAL 132
Query: 130 LEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + G+L + K DVT E+ + + KT L ALE ++
Sbjct: 133 DIVEIIRIFGLAAGSSGMVGGQLDDMLAEKRNDVTLEELQSIHERKTGALLVYALEAGAI 192
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG R LK +G +LGIAFQ+ DD+LD G+ +GK +G D N K T P +L
Sbjct: 193 LAGASVEDRMHLKQFGRHLGIAFQIQDDILDVVGDEETIGKRVGSDELNDKTTYPKLL-- 250
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + + A+ ++ L
Sbjct: 251 ------------------------------------GLEGAKQALDQEVEAAQAAIESL- 273
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S L+E++ F ++R +
Sbjct: 274 -SVPAPLLLEMLSFVVKRNH 292
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL + + + + ++ ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + ++
Sbjct: 237 EDNHKTTFVKVY--------------------------------------SIDKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
Length = 302
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 120/327 (36%), Gaps = 50/327 (15%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+E++ +L R+ I + ++Y GGKR RP L +A + + +
Sbjct: 16 ATVAAKVEEMLDRLLPRVEGPEARIAEAMRYAALGGGKRFRPFLVAQSAALFGVASEAAL 75
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A E +H +L+H +DD LR G A + T+VL GD LL+ AF ++ +
Sbjct: 76 RAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGDALLTLAFEILAD 135
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSKTAVLFSA 175
++ E + LA + + + + + KT L S
Sbjct: 136 PETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITRLQQLKTGALISF 195
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ E +++ AL +Y ++G+A+Q+ DD+LD G+ MGK G+D GK T
Sbjct: 196 SCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGDAAAMGKATGKDAAAGKAT 255
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
IL L +A ++A
Sbjct: 256 FVSIL--------------------------------------GLDRARAQAGMLAEQAV 277
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + + L F + R N
Sbjct: 278 QHLDLFDERA--DLLRHAAHFVITRRN 302
>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
Length = 295
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 120/320 (37%), Gaps = 53/320 (16%)
Query: 16 NFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + + ++ + + ++Y + GGKRLRP+L LA A + + A+E
Sbjct: 16 ELVLERVLPAENSLPQRLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEAAAAEAALAAVE 75
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+H +L+HDD+ LRRGK + + T++LVGD L + AF ++ A
Sbjct: 76 LVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVLSRPNGLPAP 135
Query: 131 EALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L +V +A G+ L E A++ +A +
Sbjct: 136 RQLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRLKTGALIRAAVALGALS 195
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ ++ L Y LG+AFQ++DDVLD + +GK G+D KPT ++
Sbjct: 196 CPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDQEADKPTYVKLM-- 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L A +A+ +L
Sbjct: 254 ------------------------------------GLNAARDYAERLVAEAQQALSGFD 277
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ + L ++ F +R N
Sbjct: 278 ARADR--LRQLAAFVTERRN 295
>gi|50744624|ref|XP_419804.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2 [Gallus gallus]
Length = 379
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/345 (15%), Positives = 123/345 (35%), Gaps = 38/345 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + +R ++ L +
Sbjct: 48 SLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQ-----MRGLVVLLISKA 102
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-GKVAARLVW 101
+ LA E IHTA L+H +V+ L+ + +
Sbjct: 103 AGPSTAELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQF 162
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-- 159
GN+ +VL GDFLL+ A + + ++ + +E +S L +G + S S +T++
Sbjct: 163 GNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSRSSENCLTDDIG 222
Query: 160 --DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ + + L + + + + +A ++ YG ++ ++ +L D+ + E
Sbjct: 223 ISTWKEQVFLSHSALLAKSCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPFVKE 282
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + + G + G + + KK ++
Sbjct: 283 SSSDAMAFSLNCAPAV-----LHQEFLGRDAWIKQIREAQGKGNLM--DYKKLQEAIKAG 335
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G +A +L P S + +L +V + R +
Sbjct: 336 KGVTSAIDLCRCHGNRALAALESFPPSEARAALANIVH-AVTRFS 379
>gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster]
Length = 245
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 5/249 (2%)
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S +
Sbjct: 1 MVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIV 60
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
LS + L +GE QL + + YL KTA L + AL+ +++IA ++V +
Sbjct: 61 LSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAE 120
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ +
Sbjct: 121 VAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMV 180
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
++++AF ++ ++ L T + A + +A + L +S ++K L
Sbjct: 181 M-----RRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQV 235
Query: 313 VVDFCLQRL 321
V D + R+
Sbjct: 236 VADLVINRM 244
>gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355]
Length = 299
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 120/331 (36%), Gaps = 54/331 (16%)
Query: 6 DLTLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+L +VN + L + + + ++Y GGKRLRP L AT ML
Sbjct: 5 ELLDAYHRQVNRALTGLLDALPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLHADKA 64
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E IH +L+HDD+ LRRG+ + +G T++L GD L + AF +
Sbjct: 65 SLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSI 124
Query: 121 VIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ + L + G+ L+ + A
Sbjct: 125 LADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGA 184
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ +A + L Y +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 185 LIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIGKRQGADQD 244
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T P ++ L D +A
Sbjct: 245 LGKSTYPSLM--------------------------------------GLDDARTKALDL 266
Query: 291 GQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
Q+A D+L L S+ +L + F ++R
Sbjct: 267 YQEAVDALHMLSAKSYNTTALKALASFVIER 297
>gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 14/290 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
E V+ + + + + V Y GGK +RP L + A +
Sbjct: 21 ELVDPGLRAAVNTLAPAMRLVAGYHFGWYDEHGAPTRTQGGKAIRPALVVLAAEAVGGSP 80
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM- 120
+ A A+E +H +LLHDDV+D RR + A V+GN ++L GD LL+ A +
Sbjct: 81 ATALPAAVAVELVHNFSLLHDDVMDGDLTRRHRATAWRVFGNGPAILAGDALLTLASDVL 140
Query: 121 --VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+Q + L+ L +G++ L+ K DV + ++ KT L A
Sbjct: 141 AASGHPAAQAGVRTLNTAVLELVDGQVADLAFEKRDDVGVAECQTMVAGKTGALLGCACA 200
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V + G + L+ +G LG+AFQ VDD+L G+ GK + D R K +LPV
Sbjct: 201 VGADFGGGSTEQVEHLRRFGELLGLAFQHVDDLLGIWGDPEITGKPVHSDLRTRKKSLPV 260
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ A GT + + +S +L +A ++ + +A
Sbjct: 261 VAALTSGTAAAEELAELYHRAEPLSDADLPRAAELVDRAGGRDWSRRQAD 310
>gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 347
Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 102/295 (34%), Gaps = 16/295 (5%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LR L LAT + A +E H A L+HDD+ D+S RRG +
Sbjct: 51 GKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDIQDESEQRRGGRTLHAEY 110
Query: 102 GNQTSVLVGDFLLSQAFCMVIETK----SQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++ VG+ A + + S A + + Q +
Sbjct: 111 GVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIEIGWIRDN 170
Query: 158 EEDYLHVIKSKTA------VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
D + L+A + + L YG LG AFQ+ DD
Sbjct: 171 VCDLDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDA 230
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKK 269
L+ G+ GK I D GK TL +I +R T E+ + + ++
Sbjct: 231 LNLTGDYARYGKEIAGDLWEGKRTLILIDFMRRCTPEERERLVRLLSRTRAERTDAEVRW 290
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAK----DSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + A A+ +L D+ + L+E+ D+ ++R
Sbjct: 291 LHGRLLAYDCVESARRSARDLALAARREGERALGDAADTDDGRFLLELTDYVVER 345
>gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
Length = 321
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/307 (18%), Positives = 118/307 (38%), Gaps = 11/307 (3%)
Query: 11 DMEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DM++ N ++ K + + ++ + Y+ GK+ R + LA L +
Sbjct: 5 DMDEFNEILEKCRDQSLQKEQDAILLEPFAYIQQIPGKQFRAKMALAFNHWLNIPEEKLA 64
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ G+++L A V
Sbjct: 65 AIGEVVQMMHNSSLLIDDIEDNSILRRGIPVAHKIYGIASTINAGNYVLVLALAKVHGLG 124
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
EA + ++ L G+ ++ N E + + +
Sbjct: 125 HPEAQQVVTEQLLELHRGQGMEIYWRDNFICPTEAEYKQMVIRKTGGLFMLAIRLMQLFS 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
L + G++FQ+ DD + + K+ ED GK + PVI A
Sbjct: 185 DDKKDFTKLTAIL---GLSFQIRDDYCNLTSKDYSDNKSYCEDLTEGKFSFPVIHAV--- 238
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ + VE + ++ + + T +A+ + L ++
Sbjct: 239 LNQKDRQVLHILRQRTQDVEVKRYCVSLLEKLGSFKYTAEVLEMLDTEARAEIERLGENP 298
Query: 306 WKKSLME 312
+SL++
Sbjct: 299 IMQSLLD 305
>gi|322711435|gb|EFZ03008.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
23]
Length = 327
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 12/295 (4%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ +++ + YL S GK +R LT A L + ++ I+ +H A+LL DD+
Sbjct: 37 EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVTVIKRIIDLLHNASLLIDDIQ 96
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ + A + + + A + L G+
Sbjct: 97 DSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRGQG 156
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
+L + TE++Y+ +I++KT LF A+ + ++S ++ LG
Sbjct: 157 MELHWRDSLHCPTEQEYMRMIQNKTGGLFRLAIRL----MQGESSSKRDFVPLVETLGAL 212
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + +V K ED GK + P+I + + + +
Sbjct: 213 FQIRDDYQNLQSDVYSKNKGYCEDISEGKFSYPIIHSIRSRPGD--LRLLNILKQRSEDP 270
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-----SWKKSLMEVV 314
+ A + + V + + S Q+AK L L + + L +
Sbjct: 271 MVKEYAVEYIESTGSFVYSRQKIESLLQQAKAQLADLENGTNRGEKMRAILKMLA 325
>gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
doylei 269.97]
Length = 297
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 157/311 (50%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 VIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEQ 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA ++ ++
Sbjct: 230 RIYLQTLFKK-DLNESEKEWLKTKFEEQKALEKAILEAKTYAKKASKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
And Isoprenyl Pyrophosphate
Length = 303
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/311 (19%), Positives = 111/311 (35%), Gaps = 52/311 (16%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH-- 81
++ + + +Y + +GGKR+RP+L A L + + ACA+E IH +L+H
Sbjct: 33 SPELARLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDD 92
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----------MVIETKSQEALE 131
DD LRRG+ + ++L GD L S AF
Sbjct: 93 LPAXDDDDLRRGQPTTHKAFDEAXAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTL 152
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + G+ L + A++ ++ + + +
Sbjct: 153 AQAAGPAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGEL 212
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 213 KALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP-------------- 258
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ L + A +A +LR + + L
Sbjct: 259 --------------------ALL----GLAAAKEYALELRDQALHALRPFD--AAAEPLR 292
Query: 312 EVVDFCLQRLN 322
E+ + ++R +
Sbjct: 293 ELARYIVERRS 303
>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
M50/1]
Length = 296
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 57/334 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + ++ +I + + + + + + Y +GGKRLRP+L L T +
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ AIE IHT +L+HDD+ +D+ RRGK +V+G ++L GD LL+ A
Sbjct: 62 KSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYA 121
Query: 118 FCMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + E + G+ + D+T+E + +
Sbjct: 122 FETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT+ L A++ + +++AG S ++ ++ +G+AFQ+ DD+LD + +GK IG
Sbjct: 182 KTSALIEASMMIGAVLAGATGSEQKIVEEVASKVGLAFQIQDDILDVTSTMEVLGKPIGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T + +
Sbjct: 242 DEKNHKSTYVT--------------------------------------YEGIEKAKQDV 263
Query: 288 YSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQR 320
+KA + L K + L E++ + + R
Sbjct: 264 ADLSEKAIAQMETL---VVKNEFLTELLRYLISR 294
>gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1]
gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1]
gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 391
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/382 (18%), Positives = 137/382 (35%), Gaps = 66/382 (17%)
Query: 5 EDLTLKDMEK----VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+L +E+ V I + I D + +++ K LRP L +A
Sbjct: 8 RELLTGYLEECRLQVIQEIQRLIPPDRPAAFLYELMLDYPLREAKGLRPALCIAACRASG 67
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A A+E H A L+HDD+ D+S LRRG+ + G ++ VGD +L+ +
Sbjct: 68 GTLEAALRPAVALELYHNAFLIHDDIEDESHLRRGRPTLHQLHGVPVAINVGDAMLALSL 127
Query: 119 CMVIETKSQEALEALSLVACTLAEGELR---------QLSLSKNLDVTEEDYLHVIKSKT 169
+++ L + +A + + + DY+ +++ KT
Sbjct: 128 QPLLDNIGFIGLGPSLRILQEVARMARESAEGQALELDWIRRGHWALEDADYVRMVEQKT 187
Query: 170 AVLFSAALEVSSLIAGVQNSVRQ-ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+A QN L + LGIAFQ+ DD+L+ GEV GK IG D
Sbjct: 188 CWYSFITPVTLGALAARQNPAHTAQLAEFARCLGIAFQIQDDLLNLSGEVGAYGKEIGGD 247
Query: 229 FRNGKPTLPVILAFQRGTKR---------------------------------------- 248
GK TL ++ +R +
Sbjct: 248 LWEGKRTLMLLHMMRRASPPERAEAERILSLPRPGANPELRGPALEPVLEQLVARGQLTP 307
Query: 249 ------EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-- 300
++ + + + E ++ ++ + +L A + ++A+ +
Sbjct: 308 EGLAHLRHVMAEAMPSKKEKTPEQVRFLLKLLHRHGSLDHARQVAQGWLEQARRAFDACT 367
Query: 301 --LPDSSWKKSLMEVVDFCLQR 320
L S + L ++ + ++R
Sbjct: 368 GWLLPSVHRDLLEVLLTYVVER 389
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 83/335 (24%), Positives = 136/335 (40%), Gaps = 55/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+L+ E + + S + D + Y + GGKRLRP+L +A A +L
Sbjct: 5 DILKRELKDKKEIFERYMEDWVGSRPEGVPPRMWDAMVYSLKVGGKRLRPVLCMAAAELL 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
R D + +A A+E +HTA+L+HDD+ LRRG+ +V+G ++L GD LL
Sbjct: 65 GGRSDLVLPMALALEMVHTASLIHDDLPAMDDDVLRRGQPTNHVVYGEALAILAGDALLC 124
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIK 166
QAF + + E + A + + + +
Sbjct: 125 QAFELPLTELPSEIPRGNVVKAVAHFARSIGPGGICGGQVLDMESEGSEEECSSPTEIST 184
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L +L ++++G +AL+SYG+ LG+AFQ+ DD+LD +G+ E+GK++G
Sbjct: 185 LKTAALIRTSLITGAILSGGSAEDLEALESYGLELGVAFQIADDILDVKGDQEELGKSLG 244
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D +GK T L + R
Sbjct: 245 KDEAHGKRTFVSDL--------------------------------------GMEGAMRR 266
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++A SL +SS L E+ + R
Sbjct: 267 LKERTERAISSLDRFGESSA--FLRELALYLEHRT 299
>gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
(Farnesyltranstransferase) [Candidatus Cloacamonas
acidaminovorans]
gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
(Farnesyltranstransferase) [Candidatus Cloacamonas
acidaminovorans]
Length = 296
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 73/330 (22%), Positives = 128/330 (38%), Gaps = 55/330 (16%)
Query: 7 LTLKDMEK----VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L KDM++ VN ++ + + E + ++Y +F+GGKRLRP LT+ M
Sbjct: 6 LLKKDMKEKQELVNIILDRFLPRKDEYPKDLHKAMRYSVFAGGKRLRPYLTMTAFEMFNS 65
Query: 60 RGDNHVLLACAIEFIHTATLLH--------DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ +A IE IHT +L+H DD + ++L+
Sbjct: 66 NIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDALLLSA 125
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F L + + + Q E V S+ V ++ ++ ++KTA
Sbjct: 126 FELITLAELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIHENKTAR 185
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + +L +L + + L YG +G+ FQ+VDD+LD G E+GK IG+D +
Sbjct: 186 LINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIEGTQEELGKTIGKDAES 245
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P + + ++ +A
Sbjct: 246 AKATFPAVY--------------------------------------GIAESHKKAEELT 267
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+KA++ L L + + K L + ++ L R
Sbjct: 268 EKAREILAPLGEKALK--LDILAEYLLGRK 295
>gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12]
gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12]
Length = 293
Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 121/331 (36%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML D + ++V+ + K I + + +K+ GGKR+RP L A ML
Sbjct: 1 MLIDTITRYQQRVDSQLEKIIDAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGDMLNI 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A AIE +H +L+HDD+ LRRG+ + + T++L GD L +
Sbjct: 61 PLKKLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALG 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKT 169
F ++ E + LA+ + K KT
Sbjct: 121 FEIICEPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLHKLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+E+ + A V + L + +G+AFQ+ DDVLD E+GK G D
Sbjct: 181 GALIRCAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLDIISSTEELGKPQGSDC 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A S
Sbjct: 241 ESNKSTYPRLL--------------------------------------GLAGAQATAKS 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A +L LP +S + + E + ++R
Sbjct: 263 LIEDALSALTKLPYNS--QLIAEFARYIIER 291
>gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
Length = 345
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 19/329 (5%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATAL 55
L ++ + ++ + E + + Y + S GK +R L A
Sbjct: 19 LLKNARQECDPVLRTAVGWLSEPLAKMAGYHLGWWDVNGVPVDGSSGKSIRAALAFGAAS 78
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+A A+E +H +L+HDDV+D A RRG+ VWG ++++GD L +
Sbjct: 79 ACG-DARAAAPVAAAVELMHNFSLVHDDVMDRDATRRGRATVWAVWGETNAIVLGDALHA 137
Query: 116 QA----FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
A M+ + A+ L TL +G+ V+ + YL + KTA
Sbjct: 138 LAGRVLVEMLEPEVAANAVMRLESSCVTLCDGQFEDCDFETRESVSVDGYLEMAAGKTAG 197
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + +L A + A+ +G LG+AFQ+VDDV+ G+ N GK +G D
Sbjct: 198 LMGCACALGALAANADPATVTAMHQFGFQLGLAFQIVDDVMGLWGDPNVTGKPVGSDLAR 257
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T PV+ A G++ + + +S +++++A ++ E +A
Sbjct: 258 RKKTFPVVAALGSGSEAAASLAQLYGAKEPMSADDVRQAIDLVETAGGRKAAERQADECI 317
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L PDS+ + L+ + + R
Sbjct: 318 GAALAAL---PDSARSEDLIALTQLVIAR 343
>gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 299
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
KV + +V+ + D ++Y +F+GGKRLRP L ++ + E D A
Sbjct: 15 AKVEEFFETYVACPDENVKGLVDAMRYSLFAGGKRLRPALVFSSYGVFEGYFDKATPFAA 74
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+H +DD RRGK ++G T++L GD LL++AF ++ +
Sbjct: 75 AVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHKMYGEATAILAGDGLLTKAFEVMCNAEIN 134
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+E ++ + T+ + + + V F + S LI+
Sbjct: 135 PDVEPAQMLEAAYKLADAAGDRGMVGGQFTDMEAEDGVFNSATVDFIHMNKTSRLISYCC 194
Query: 188 ----------NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++ YG+ +G+AFQ+VDD+LD E+GKN+G D GK T P
Sbjct: 195 ELGAILGFGSEDDKKRMREYGIRIGLAFQIVDDILDIASTTEELGKNVGSDQERGKATYP 254
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ L ++ +A ++A +
Sbjct: 255 ALH--------------------------------------GLEESHRKAEMLIEEALEI 276
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + E+ F ++R N
Sbjct: 277 ISVY--GKTAEPCREIAKFIIERKN 299
>gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 58/332 (17%)
Query: 9 LKDM----EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+D+ V ++ + + ++Y + +GGKRLRP+L LA +L D
Sbjct: 4 KEDLGRRAALVEAYLVGCLRDRNIPARLLASMEYSLLAGGKRLRPVLVLAWNGLLGGDAD 63
Query: 63 NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A ++E IHT +L+H +DD LRRG+ + + T++L GD LL++AF +
Sbjct: 64 KAMPFAASMECIHTYSLIHDDLPAMDDDDLRRGRPSNHKQFDEATAILAGDGLLTEAFVL 123
Query: 121 VIETKSQEALEALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ ET + L A ++ + G+ + L+ V ++ + KT
Sbjct: 124 MTETCLVKGLPAERVLRAIAVLARAAGSGGMVGGQAVDMELTGRTGVPLDELKKMHAMKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L +AA E +++AG S + +G +G+AFQ+VDDVLD G+ +GK +G D
Sbjct: 184 GALLTAACECGAILAGAAESDVDNARRFGRKIGVAFQIVDDVLDVVGDTATLGKPVGSDE 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T P +L L ++ A
Sbjct: 244 AMGKTTYPSLL--------------------------------------GLDRSKTLARE 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
Y +A +L ++ L ++ + + R+
Sbjct: 266 YVDEALTNLSGYFGCE-QEFLWQLARYIVDRV 296
>gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
furnissii CIP 102972]
gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
furnissii CIP 102972]
gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218]
Length = 294
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L R+ + + + ++Y + GGKR RP L T ML + A AIE IH +L
Sbjct: 20 LNRLPNQNLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCEPSDLDTPASAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD+ LRRGK + + T++L GD L + AF ++ E +A E +
Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIKFDEATAILTGDALQTLAFTILAEGTLSDAGEMNRVKM 139
Query: 138 CT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ G+ L+ L +E A++ A +
Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLVALDELENIHRNKTGALMRCAIRMGAMAAGHKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
V L Y +G+AFQ+ DD+LD + +GK G D + K T P +L
Sbjct: 200 LDVLPHLDRYADAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A ++A +L+ +P +
Sbjct: 253 -------------------------------GLEGAMNKAQLLYEEALQALQAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 EHLEEFARYVIERKN 294
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 63/344 (18%)
Query: 1 MKMLEDL-TLKDME----KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLA 52
MK L L + + V+ + ++ + +++ + + Y + +GGKRLRP+L +A
Sbjct: 1 MKGLNRLSFKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIA 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
A + + +ACA+E +HT +L+H +DD RRGK+ V+G +VL G
Sbjct: 61 AAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEAL----------SLVACTLAEGELRQLSLSKNLDVTEED 160
D LL+ AF +++ + + + G + ++
Sbjct: 121 DALLTHAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKE 180
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
++ KTA L +L IAG S +AL+ +G +LG+AFQ+ DD+LD G+ ++
Sbjct: 181 LEYIHLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
MGK D K T P + +
Sbjct: 241 MGKKTQSDVEQEKVTYPYFI--------------------------------------GV 262
Query: 281 VDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
+ + AK + +PDS L+E+ D+ ++R +
Sbjct: 263 DASLRQVEELTVSAKKVIAEGGIPDS---SRLLEIADYLMKRDH 303
>gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
Length = 367
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/352 (18%), Positives = 117/352 (33%), Gaps = 41/352 (11%)
Query: 7 LTLKDMEKVNFLILKRICSDVEM-IP--DVVKYLIFSGGKRLRPMLTL---ATALMLEYR 60
+ ++ V I + S + + ++ GGKRLR LTL +
Sbjct: 17 IVEDNLRAVFSRIREEASSISPLTLDAVEIASDYTLRGGKRLRAFLTLVGYWSKEWGSGD 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
L IE + + L+HDDV+D +RRG + ++ +
Sbjct: 77 PSLITSLMTGIELLQSYLLVHDDVMDRDEIRRGGPTVHSWFRDKCIREFKTGDCTHYGDS 136
Query: 121 VIETKSQEALEALSLVA---------------------CTLAEGELRQLSLSKNLDVTEE 159
T +A G+ + S
Sbjct: 137 QAITVGDFLEATAVEYVSRAGINGEVLSKLLGTYAAGLRKVAYGQYLDVLFSYRSLHEVS 196
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA----LKSYGMNLGIAFQLVDDVLDYR 215
+ ++ + + A + L SY + GIAFQL DD++
Sbjct: 197 ERDVLLVHRLKTASYTIELPLHMGAIASGKYNERLLGELSSYAIPAGIAFQLRDDIIGLY 256
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--KISVENLKKAFII 273
G+ + GK +G D + K TL V+ A++ G++ K + ++++++K +
Sbjct: 257 GDPRQTGKPVGSDVKERKKTLLVVKAYELGSEEVKRRLSEIYDAPGTDVTLDHVKYVQDV 316
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDS-----SWKKSLMEVVDFCLQR 320
+RE +L +E Y +A L DS L ++ R
Sbjct: 317 VRETGSLEYSEMLIRRYVDEAAKVLE---DSREMSKQAADVLKWLLVKLAYR 365
>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 306
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 126/321 (39%), Gaps = 49/321 (15%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ +V + +C D + + ++Y + GGKRLRP+L LA + + ACA
Sbjct: 25 LARVEDALSHWVCPDAPAGLGEAMRYAVLDGGKRLRPLLVLAACEAVGGNAQAALRAACA 84
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD +D+ +RRGK + +G ++L GD L + AF ++
Sbjct: 85 VELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGDALQALAFELLTPEDGVP 144
Query: 129 ALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTAVLFSAALEVSS 181
L ++ + + ++E+ + + KT L A++ + +
Sbjct: 145 PAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQMHRLKTGALLQASVVMGA 204
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ +AL YG +G+AFQ+VDDVLD + +GK G+D KPT ++
Sbjct: 205 VCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAACDKPTYVSLMG 264
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + S L DT
Sbjct: 265 LEAARAHAEALRAQALAALAAS---------------GLTDTR----------------- 292
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+L + D ++R +
Sbjct: 293 -------ALAALADMVVRRSH 306
>gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 260.94]
Length = 297
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFL---EELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKLDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA+ ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b]
gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 299
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 121/334 (36%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L E+VN + + + + + ++Y GGKRLRP L AT ML+
Sbjct: 2 DFAKLLSAYHERVNLALTRLLDPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLKA 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+HDD+ LRRG+ + +G T++L GD L + A
Sbjct: 62 DPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + + + G+ L+ +
Sbjct: 122 FSILADQPMPGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQIHRHK 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 182 TGALIRAAVRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTAILGKTQGA 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L + +A
Sbjct: 242 DQALGKSTYPALM--------------------------------------GLDNARQKA 263
Query: 288 YSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ Q+A +L L S +L + F ++R
Sbjct: 264 WDLYQEALGALDILAAQSFNTTALQALASFIIER 297
>gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas sp. SM9913]
gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas sp. SM9913]
Length = 295
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/334 (22%), Positives = 129/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+K L D+ +N + + SD I + Y + +GGKRLRP L T +L
Sbjct: 3 IKEQIKLAQDDVANTLNLYFEQPLESDN-TIKEATHYSVMNGGKRLRPFLVYTTGKILGA 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +LA AIE IH+ +L+H +DD LRRG+ +V+G ++L GD L + A
Sbjct: 62 DKRDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIVYGEAQAILAGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTA 170
F ++ + + + EA + LA Q ++ V D L I
Sbjct: 122 FELIAKHTFKCSTEAQLKMIAALAHASGLQGMVAGQGRDIAATDKVITVDELERIHKLKT 181
Query: 171 VLF--SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A + L ++G +G+AFQ+ DD+LD G+ +GK G D
Sbjct: 182 GALINCAITLGALCAPNTSQQTLDNLSTFGYAIGLAFQVHDDILDVEGDTLTLGKPQGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L + +A
Sbjct: 242 IAANKATYPALLGMLG--------------------------------------AKQKAQ 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A ++L + + L + ++ ++R +
Sbjct: 264 NLIQQAHEALANID--ADTTDLAALANYLIERDH 295
>gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
Length = 292
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/331 (20%), Positives = 119/331 (35%), Gaps = 51/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+E L D +V+ + + E + +++ + GGKRLRP+L AT L
Sbjct: 2 NIERLMAADRRRVDECLETLFARGESAPSEQLDAAMRHGVLVGGKRLRPVLLYATGRALG 61
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E +H +L+H +DD +RRG+ + T++L GD L +
Sbjct: 62 ASDEALDGPAMAVELVHAYSLVHDDLPAMDDDDVRRGRPTVHRAYDEATAILAGDALQTL 121
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELR-----QLSLSKNLDVTEEDYLHVIKSKTAV 171
AF ++ +T + +A + L A+
Sbjct: 122 AFEVLADTGHPRLAAMVGTLARAAGRDGMAAGQALDLDAVGGHPDLTALATMHRHKTGAL 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ +A + + AL+ Y +G+AFQ+ DDVLD G+ +GK G D
Sbjct: 182 IHAAVRLGGLVAVPEDDERLLALERYAAAIGLAFQIRDDVLDVTGDTAVLGKTSGADAAR 241
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
KPT P +L L + +A S
Sbjct: 242 DKPTYPTLL--------------------------------------GLKGADDKARSLV 263
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L L L + + ++R +
Sbjct: 264 DEAVSALAPL--GEAGSVLANLARYMIERDH 292
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/339 (20%), Positives = 124/339 (36%), Gaps = 58/339 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ + + +++ +I + + + + + + Y + +GGKRLRPML +
Sbjct: 4 MEQFKAEMERRTKEIEQIIEPYLPEETGHQKTVLEAMNYSMKAGGKRLRPMLMQEVCRLF 63
Query: 58 EYR-GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D + A+E IHT++L+HDD +DD LRRGK + +G VL GD L+
Sbjct: 64 TGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALM 123
Query: 115 SQAFCMVIETKSQEALEAL------------SLVACTLAEGELRQLSLSKNLDVTEEDYL 162
AF G D+ +
Sbjct: 124 MYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRDKLD 183
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KT L A++ + +++ G + ++ ++G+AFQ+ DD+LD G E+G
Sbjct: 184 FIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSEAELG 243
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G D RNGK T + L
Sbjct: 244 KPAGSDARNGKTTYVTLE--------------------------------------GLEK 265
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +A + L LP ++ + L ++ + R
Sbjct: 266 AKKDVEQLSAQAIEDLEQLPGNN--EFLENLIRMLMDRK 302
>gi|189055159|dbj|BAG38145.1| unnamed protein product [Homo sapiens]
Length = 399
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 120/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IH A L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLARSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 74/340 (21%), Positives = 130/340 (38%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--------EMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + V E++ ++Y + +GGKRLRP L +
Sbjct: 1 MHEFITLLAKHAHSVEKRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+ + + + + +A A+E IH +L+HDD+ LRRG+ + + T++L G
Sbjct: 61 SCALFDIPIEYSLNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYL 162
+ LL+ AF ++ S+ + E + LA+ + + +D
Sbjct: 121 NALLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDIT 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KTA L S A + ++I + + L ++G LG+AFQL DD+LD +G
Sbjct: 181 TLQHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K T + + +
Sbjct: 241 KTAGKDETAHKATFIRLY--------------------------------------GIEE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
T+ + +A+ L LP + L + F R N
Sbjct: 263 TQKKRDELIAQAEALL--LPFGAKATPLQQAARFSATRKN 300
>gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
Length = 293
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 55/326 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHV 65
L ++M LIL S + + + + Y + +GGKR+RP+L LA M + +
Sbjct: 13 LIQQEMA---QLILSL--SIPDSLKESMHYSLQAGGKRIRPILLLAVLHEMTGKEHPDAL 67
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A AIE IHT +L+H +DD LRRG V+G ++L GD LL+ +F +V
Sbjct: 68 KVAAAIEMIHTYSLIHDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVAR 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAA 176
+ + + + L+ + + LD+ E+ V + KT L + +
Sbjct: 128 LEHVSSDDKVRLIDLMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLKTGALLTFS 187
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ ++A N AL +G +LG+AFQ+ DD+LD G E+GK G+D + K T
Sbjct: 188 ILAGGILAQATNDEIIALSQFGQHLGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTY 247
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P +L L + + + +A +
Sbjct: 248 PSLLT--------------------------------------LPKAKEKLDYHASEAIN 269
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L L + K L+E+ +QR N
Sbjct: 270 ALNKL--NGEKTLLLELTQLIVQRKN 293
>gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1]
Length = 300
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/340 (20%), Positives = 125/340 (36%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K + + + + E++ +++ +GGKRLRP L +
Sbjct: 1 MHEFMALLAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+A + + + + + A+E +H +L+HDD+ LRRGK + T++L G
Sbjct: 61 SAALFDIPLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYL 162
+ LL+ AF ++ + + G ++N +
Sbjct: 121 NALLTLAFEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAII 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KTA L S A + ++I + L ++G +LG+AFQL DD+LD +G
Sbjct: 181 TLQHMKTAALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDVTMSTKTLG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K TL + +
Sbjct: 241 KTAGKDKEANKATLVSLY--------------------------------------GIEK 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
T+ + + +A++ L D + K L + F R N
Sbjct: 263 TQKKRDTLITQAEELLHPFGDKA--KPLKQAAHFIATRNN 300
>gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
XB6B4]
Length = 296
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 133/334 (39%), Gaps = 57/334 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + ++ +I + + + + + + Y +GGKRLRP+L L T +
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
R AIE IHT +L+HDD+ +D+ RRGK +V+G ++L GD LL+ A
Sbjct: 62 RSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYA 121
Query: 118 FCMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + E + G+ + D+T+E + +
Sbjct: 122 FETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT+ L A++ + +++AG S ++ +++ +G+AFQ+ DD+LD + +GK IG
Sbjct: 182 KTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTSTMEVLGKPIGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T + +
Sbjct: 242 DEKNHKSTYVT--------------------------------------YEGIEKAKQDV 263
Query: 288 YSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQR 320
+KA + L K + L E++ + + R
Sbjct: 264 ADLSEKAIAQMETL---VVKNEFLTELLRYLISR 294
>gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
Length = 272
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 14 KVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++ + + E+ + ++Y I +GGKR+RP++ + A + DN ACA+E
Sbjct: 10 RIDAALEAELALHPELELTGPLRYAI-TGGKRIRPIILVLAAESVGSADDNTYAAACAVE 68
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+HT +++HDD++DD +RR K + +G TS+L GDF+L + + +
Sbjct: 69 LLHTESVIHDDIIDDETMRRHKDPFHIKYGQNTSILTGDFVLGLILKICSRLDNVRIADD 128
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
LS A ++EGE + L + DVT +DYL VI+ KTA F A ++ +++ G +
Sbjct: 129 LSTTAMMMSEGEAIEGRLENSGDVTFDDYLKVIEYKTATAFEVASKIGAILGGGSERQVE 188
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L +G N+GIA+Q+ DD+ D++ E I +
Sbjct: 189 DLTGFGKNIGIAYQIKDDLNDWKNEDKLFNLLIKKSKDPR-------------------- 228
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
E Y KA +R +P+ + + L
Sbjct: 229 -------------------------DIFDRMEEMLGGYSDKALACMRGIPEGAPRSMLET 263
Query: 313 VVDF 316
+V+F
Sbjct: 264 LVEF 267
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + ++Y + GGKR+RP+L A +
Sbjct: 1 MSDFLSWVSIHQSRFEDAVGRLLPQTDVLPQRLHAAMRYSVLEGGKRVRPLLAYAAGELA 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A A+E IH +L+HDD+ LRRGK + + T++LVGD L S
Sbjct: 61 GAPIERVEIAAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGDALQS 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKS 167
AF ++ E + + + LA + + + +
Sbjct: 121 LAFQLLSEHRLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQMHIY 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L AA+ + + + + L YG +G+AFQ+VDDVLD + +GK G+
Sbjct: 181 KTGALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGK 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D N KPT +L + + A
Sbjct: 241 DKDNDKPTYVTLL--------------------------------------GVQAAKRMA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ Q+A D+L+ S+ + L ++ DF + R
Sbjct: 263 ATLHQEALDTLKEFGASAQR--LHDLADFIVMRK 294
>gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7]
Length = 303
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/338 (20%), Positives = 127/338 (37%), Gaps = 58/338 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
LE + + L+ + + + + I ++Y + +GGKR+RP+L T
Sbjct: 2 QLEQELKEKTADIEKLLERMLPEEAGLQKTIFSAMRYSLMAGGKRIRPLLIAETYRFFGG 61
Query: 60 -RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
AIE IHT +L+HDD+ D+ RRG++ + V+G ++L GD LL+
Sbjct: 62 TDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDALLNY 121
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL------------DVTEEDYLHV 164
AF + + L + ++ + + E+ +
Sbjct: 122 AFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKTLRFI 181
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ KT L AA+ + + +AG + A++ ++G+AFQ+ DDVLD G +GK
Sbjct: 182 FELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIGNEALLGKP 241
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+ D +N K T + L +
Sbjct: 242 VHSDEKNEKTTWVTVY--------------------------------------GLEQAK 263
Query: 285 YRAYSYGQKAKDSLRCLPD--SSWKKSLMEVVDFCLQR 320
Y ++A L + K L + V++ + R
Sbjct: 264 KDVAEYSEEAMAILAQMTGVTEPEKSFLYDFVEYLIHR 301
>gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
Length = 299
Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 122/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLQACVEQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSL 63
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A+E IH +L+HDD+ +D+ LRRG + +G ++L GD L + AF
Sbjct: 64 STLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L + +
Sbjct: 124 IISDAPMPEVADRDRIAMLSELAQASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARNKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ A+ SL L S +L + D+ +QR
Sbjct: 266 LIEDARQSLSLLAAQSLDTSALEALADYIIQR 297
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 128/325 (39%), Gaps = 57/325 (17%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD------N 63
+ V ++ + + + + ++Y + GGKR+R L A G +
Sbjct: 17 QHVEHVLDELLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGAS 76
Query: 64 HVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E IH +L+HDD +DD LRRG+ + + T++L GD L AF ++
Sbjct: 77 MDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELL 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AL + A G S +T ++ + KT + +
Sbjct: 137 AGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLAC 196
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT
Sbjct: 197 SVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPT 256
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+L L A Q A
Sbjct: 257 YVSLL--------------------------------------GLDQARALAQELRQAAH 278
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+L L +S + L ++ DF + R
Sbjct: 279 QALAPLGESGAR--LGQLADFIVLR 301
>gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 345
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 127/325 (39%), Gaps = 25/325 (7%)
Query: 1 MKMLEDLTL---KDMEKVNFLILKRICS---DVEMIPDVVKYLI-----------FSGGK 43
M ++ K ++ V I + + + + ++Y + GK
Sbjct: 1 MNEIDKDIEQLDKYLQDVRNYIRQFLTDNGREPREFYNAIQYPVGLVDEQMVPGDSQSGK 60
Query: 44 RLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
LRP L + + + + A AIE +H TL+HDD+ D S RR + + + G
Sbjct: 61 MLRPRLCILSCMAAGGEVRKAIPAAAAIEILHNFTLVHDDIEDHSPSRRHRPSLWKLIGV 120
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEAL--------EALSLVACTLAEGELRQLSLSKNLD 155
++ GD + + ++ + A ++ EG+ L +
Sbjct: 121 PLALNAGDGMFVISHMVLQSMLELGVPAQTVLAAIDKFDQAALSVCEGQHMDLMFEAREE 180
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
V+ ++YL +I KT L + + +L+AG V + + +G NLG+A+Q+ DD+
Sbjct: 181 VSLQEYLAMISRKTGALMGLSCYLGALVAGKDECVLEQYRHFGENLGLAYQIRDDIAGIW 240
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
GK ED K + P++ A + E + + I+ E ++
Sbjct: 241 ESSESTGKRELEDIFRKKKSYPIVKAMEVLEGNEAERLRQIYKNESITDEEALWVKETLK 300
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + + Y +A +L+
Sbjct: 301 NRGIMQEGIEKVHEYLSRAVAALQQ 325
>gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R]
gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R]
Length = 258
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ +YG NLGIAFQLVDD+LDY MGK G D + G T P + A+ E
Sbjct: 131 WKEIAYAYGRNLGIAFQLVDDILDYESGEAAMGKPGGADLKLGLATGPALFAW-----EE 185
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
I +++ A ++R + + T A + KA++ L LP+S K +
Sbjct: 186 HPEMGPLIKRKFQQEGDVELARDLVRRSSGVERTRDLARMHADKAREVLAPLPESDAKGA 245
Query: 310 LMEVVDFCLQRL 321
L + + ++R
Sbjct: 246 LEVLTERVVKRT 257
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 123/324 (37%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + + + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LERVETALGHYLPAGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A +LV +A G+ L+ + A+L ++
Sbjct: 131 LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRASVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +AL +Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A +L
Sbjct: 249 --------------------------------VSII----GLDASRALAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 EPF--GARAQRLAELADLVVNRVS 294
>gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 297
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
Length = 310
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/325 (21%), Positives = 119/325 (36%), Gaps = 54/325 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V+ + + + + + + Y GGKRLRP L A M + N A
Sbjct: 20 QRVDDALNQALSALPFTDMPLGKAMHYGALLGGKRLRPFLVYAVGEMFKVPALNLDAPAA 79
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+H +DD LRRGK + +G ++L GD L + AF ++ +
Sbjct: 80 AIECIHAYSLIHDDLPAMDDDDLRRGKPTCHIEFGEANAILAGDALQALAFEILAKNPMP 139
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L + A++ +A
Sbjct: 140 DVAITDRVAMIAELATASGLAGMCGGQALDLEAEDKSIDLASLEKIHLHKTGALIRAAVR 199
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + V AL Y ++G+AFQ+ DD+LD G E GK G D +GK T P
Sbjct: 200 LGAFSAGSKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQESGKSTYP 259
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A +A D+
Sbjct: 260 ----------------------------------ALL----GLEQAQKKAQELYNEALDA 281
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQRL 321
L L + +L ++ F ++R
Sbjct: 282 LAFLEQYEYDTTTLKQLASFIVERK 306
>gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 317
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLAT-ALMLEYRGDNH 64
+ +++K +I++ + I D + L GKR+R +L L + D
Sbjct: 1 MVKVELDKTEQVIMQVAKNAPAGISDRLVTLFSRKGKRIRSTLLCLLANCGAQKPDIDRV 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A+E +H A+L+HDD++D + +RRG+ A WG Q +VL+GD++LSQ+ VI+
Sbjct: 61 AHACAAVELLHLASLVHDDIIDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDE 120
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+++ +S A L GE+ +L ++ ++ + Y +I KTA L AA + ++A
Sbjct: 121 QARNIPVIISDAADKLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAAARIGGILA 180
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + G + GIAFQ++DD+LDY M K D NG TLP++ F+
Sbjct: 181 GFDQPMVDECAKMGTHFGIAFQIIDDLLDYGYGSVNMDKAKFTDLSNGLITLPLLYYFED 240
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
T E+ + I +K + ++ + A + ++A P S
Sbjct: 241 CTAEERREMEGFIAKASA-EGIPEKIQDRLFAKKSFAKAKAEAQEHLEQALAIADKFPKS 299
Query: 305 SWKKSLMEVVDFCLQRLN 322
++ + + + R N
Sbjct: 300 NFTEEITAMFASMSDRGN 317
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 123/324 (37%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + + + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LERVETALGHYLPAGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A +LV +A G+ L+ + A+L ++
Sbjct: 131 LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +AL +Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A +L
Sbjct: 249 --------------------------------VSII----GLDASRALAAQLRADAHAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 EPF--GARAQRLAELADLVVNRVS 294
>gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
Length = 290
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 11/236 (4%)
Query: 13 EKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLAC 69
E++ + K + +DV+ + D + Y + +GGKRLRP LTLAT ML D+ + A
Sbjct: 10 EQIENYLSKSLAADVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTINDDLLRAAS 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V +
Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLP 129
Query: 128 EALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + ++ +T ++ + KT L A+
Sbjct: 130 ANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGG 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P
Sbjct: 190 IMMDQSAEIKQELAAFGENYGLAFQIYDDLMDILSTTEEMGKAVHKDADEQKNTYP 245
>gi|218680010|ref|ZP_03527907.1| putative octaprenyl-diphosphate synthase [Rhizobium etli CIAT 894]
Length = 124
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 92/124 (74%)
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
MNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVILA++RGT+ E+ FW+ I
Sbjct: 1 MNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVILAYRRGTEDERAFWRDAIE 60
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
G + NL+KA ++ + L DT RA YG A+D+L LPD++WK +LMEV+DFC+
Sbjct: 61 AGNSTDANLEKALGLITKYGTLSDTIGRAVHYGTIARDALAPLPDTAWKSALMEVIDFCI 120
Query: 319 QRLN 322
+R+N
Sbjct: 121 ERVN 124
>gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica
Group]
gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group]
Length = 245
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 139/249 (55%), Gaps = 5/249 (2%)
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + ++ E ++
Sbjct: 1 MIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKL 60
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+S V A GE++Q S + D+T +DYL KTA L +A+ +++ +GV ++ +
Sbjct: 61 ISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTAICE 120
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A +++
Sbjct: 121 QMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFAL-----QDEPQ 175
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ I+ +L A ++ + + A G+ A SL+CLP S ++ +L
Sbjct: 176 LREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCLPRSEFRSTLEN 235
Query: 313 VVDFCLQRL 321
+V + L+R+
Sbjct: 236 MVKYNLERI 244
>gi|169808399|ref|NP_065114.3| decaprenyl-diphosphate synthase subunit 2 [Homo sapiens]
gi|73620006|sp|Q86YH6|DLP1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
2; AltName: Full=Candidate tumor suppressor protein;
AltName: Full=Decaprenyl pyrophosphate synthase subunit
2
gi|55665807|emb|CAH73573.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
gi|55958730|emb|CAI16109.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
gi|56203647|emb|CAI22356.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
gi|57162622|emb|CAI40036.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
gi|81157933|dbj|BAE48217.1| subunit 2 of decaprenyl diphosphate synthase [Homo sapiens]
gi|119568785|gb|EAW48400.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
Length = 399
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 120/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IH A L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 294
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/315 (21%), Positives = 116/315 (36%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + ++Y + GGKR RP L AT ML + A AIE IH +L
Sbjct: 20 LDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAYSL 79
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG+ + + T++L GD L + AF + +
Sbjct: 80 IHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSPDGETQRVAM 139
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ L+ EE A++ A +
Sbjct: 140 IQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGEKG 199
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 200 LAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 252
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ +A +L +P +
Sbjct: 253 -------------------------------GLEGAMEKAHTLLHEALQALEAIPYN--T 279
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 280 QHLEEFARYVVERKN 294
>gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
Length = 307
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKTIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAKALSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+ FQ++DD+LD + N +GK DF+ GK T
Sbjct: 167 MEASLKSMAILLNKDAKMYADFGLNFGMEFQIIDDLLDITQDANTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ E+ S S E ++ ++ + +T A +Y +KA
Sbjct: 227 LPYLLLYEKLNPHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQAYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|25058280|gb|AAH39906.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
Length = 399
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 121/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IH A L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G + G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIREAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 52/320 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++ + + + + + I + + Y + +GGKR+RP+L L T + + + +A
Sbjct: 9 EEIELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAA 68
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL++A ++ E +
Sbjct: 69 AIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLK 128
Query: 128 EALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+AL + + + + + ++ ++ K KT L A++
Sbjct: 129 NGEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAG 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ + + L YG NLG+AFQ+ DD+LD G+ +GK D N K T +
Sbjct: 189 AILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVY 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ K D L
Sbjct: 249 --------------------------------------GIEKCNELCTEMTNKCFDILNK 270
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ ++ K L E+ F L R
Sbjct: 271 IKKNTDK--LKEITMFLLNR 288
>gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 352
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 62/315 (19%), Positives = 113/315 (35%), Gaps = 27/315 (8%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + GKRLR D V A ++E +H A ++HDD++DDS
Sbjct: 43 LRKAAGH-----GKRLRAAFCYWGWRAAGQPESDALVRAAASMELVHAAAVVHDDLIDDS 97
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------------------- 129
LR G A + + + A + + Q
Sbjct: 98 RLRHGLPTAHVALEAVLARDGRPDARTAARSLAMLVGDQLMVLAGLLFTTSGLPAAYLAR 157
Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ +++A L GE ++ + T V L + L+AG
Sbjct: 158 ARDLWAVLARELVAGECLEILHTGGPPDTGTSLKVVRYKTAKYTVEHPLLIGGLLAGAAP 217
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
++R ++Y + LG AFQL DD+L G+ GK +D R +PT + ++
Sbjct: 218 ALRDTYRAYALPLGEAFQLRDDLLGLFGDPERTGKASLDDLRAHRPTALLAETWKAADAS 277
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WK 307
++ + + + + +L +MRE A E ++A +L +
Sbjct: 278 QRQWLRRLLGRDDLDATHLHDVRRLMRELNAPQRVEQMIADRVERATRALDGAGTPPHAR 337
Query: 308 KSLMEVVDFCLQRLN 322
++L E+ R +
Sbjct: 338 RALRELAQQATDRTH 352
>gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
Length = 153
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+YG NLGIAFQLVDDVLDY + +GK G D + G T P + A+ E
Sbjct: 31 YAYGRNLGIAFQLVDDVLDYEAVEDTLGKPGGADLQLGLATGPALYAW-----EEHAGMG 85
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
I + +++ A +R++ + T A Y +AK L+ LPDS + +L +
Sbjct: 86 PLIQRKFSNAGDVELARDYVRKSSGVERTRQLATEYANQAKIVLQPLPDSDARGALEALT 145
Query: 315 DFCLQRLN 322
D ++R +
Sbjct: 146 DRVIKRKS 153
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
Length = 303
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 128/325 (39%), Gaps = 57/325 (17%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD------N 63
+ V ++ + + + + ++Y + GGKR+R L A G +
Sbjct: 17 QHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGAS 76
Query: 64 HVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E IH +L+HDD +DD LRRG+ + + T++L GD L AF ++
Sbjct: 77 MDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELL 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AL + A G S +T ++ + KT + +
Sbjct: 137 AGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLAC 196
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT
Sbjct: 197 SVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPT 256
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+L L A Q A
Sbjct: 257 YVSLL--------------------------------------GLEQARALAQELRQAAH 278
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+L L +S + L ++ DF + R
Sbjct: 279 QALAPLGESGAR--LGQLADFIVLR 301
>gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
Length = 295
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 114/325 (35%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+VN + + + + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVNAALEPLFVAPSPQMKRLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSALLDPGLS 130
Query: 120 --MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
AL+ + G+ + + A++ +A
Sbjct: 131 SVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGALIEAAVQ 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL++Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L +A D+
Sbjct: 251 ALLGLAAAKAYALELR--------------------------------------DQALDA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
LR + + L ++ + ++R +
Sbjct: 273 LRPFD--AAAEPLRDLARYIVERRH 295
>gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp.
jejuni M1]
gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 297
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFL---EELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 TSIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
Length = 305
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 70/327 (21%), Positives = 123/327 (37%), Gaps = 56/327 (17%)
Query: 13 EKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
E+VN +L + SD+ + +K+ GGKRLRP LT ML N A
Sbjct: 18 ERVNQYLLNALDALPFSDLP-LAAAMKHGALLGGKRLRPFLTYTVGSMLGVDSVNLDAPA 76
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ +
Sbjct: 77 AAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAILAGDALQTLAFQLLSSAEM 136
Query: 127 QEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ + + + G+ L A++ +A
Sbjct: 137 PDVTDKDRIAMLSELAYASGLAGMCGGQALDLEAEGKRVDLAALERIHQHKTGALIRAAI 196
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + AL Y ++G+AFQ+ DD+LD G+ GK G D + K T
Sbjct: 197 RMGAYAAGIKGHKALPALDKYAESIGLAFQVQDDILDVIGDSEVTGKRQGADAEHEKSTY 256
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P +L L + +A A +
Sbjct: 257 PSLL--------------------------------------GLEAAQEKARELYYNALE 278
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQRLN 322
+L+ + + ++L+ + +F ++R +
Sbjct: 279 ALKAIEAEGYNTQTLVALANFIIERKS 305
>gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071]
gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071]
gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071]
Length = 359
Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 21/333 (6%)
Query: 11 DMEKVNF----LILKRICSDVEMIPDVVKYLI----------FSGGKRLRPMLTLATALM 56
++E+VN ++ + + + + +V + + GK +R LT+ T
Sbjct: 27 EIERVNRMVTPILHQAVTRFDDRLRPMVAHHFGWPSSDLPTATTSGKMVRATLTVLTGEC 86
Query: 57 LEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ A+E IH +L+HDDV+D RRG+ A +G ++L GD L
Sbjct: 87 FTTDAEAISRVTAAGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWHEYGIPAAILTGDLL 146
Query: 114 LSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
L+QA M+ A L+ LA G++ LSL + + ++ L V KT
Sbjct: 147 LAQAPLMLDGPWAADPRATRLLAEAVARLAAGQMADLSLEGRPEASPDEALAVAADKTGA 206
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + A E+ +L+AG + +G+ LG+AFQ+ DD+L G+ GK +G D R+
Sbjct: 207 LLACACELGALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGDPRRTGKPVGSDLRS 266
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K + PV A T + ++G + + ++A ++ +
Sbjct: 267 RKGSFPVTSALASDTPEAAELARFYADEGPVGEDEARRATDLVTRAGGWTRAVREIERFE 326
Query: 292 QKAKDSLRCLP--DSSWKKSLMEVVDFCLQRLN 322
A+ L +P +L+ + ++ R +
Sbjct: 327 MLARQELSSVPGLPVDRVAALLSLTNYLSNRNH 359
>gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 239
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + E V + I I + ++Y + +GGKRLRP L LAT +L
Sbjct: 25 DLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCELLGGTV 84
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + ACA+E IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LLS AF
Sbjct: 85 EMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAFE 144
Query: 120 M 120
Sbjct: 145 F 145
>gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 317
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 13/314 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALMLE---YRGDN 63
ME+V + I + +D I + V+ + GK LRP L L A + +
Sbjct: 1 MEQVKYYI--HLIADYP-IKESQVGVVLDDALNLSGKMLRPKLLLLCAFLGSNWKNNREK 57
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA +E H A+L+HDD+VD+S RRGK + + +G +V GDFL+S+ F E
Sbjct: 58 ICKLAAMVELTHLASLIHDDIVDNSPYRRGKTSLQGKYGKDAAVFAGDFLISRIFHYGTE 117
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
EA+ LS + GE+ Q D++E+ Y +I++KTA LF A + +
Sbjct: 118 ENLNEAVSVLSKTVEYMCIGEIEQDLNRYREDISEKKYFEIIENKTAALFQVACHIGAKE 177
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + L+ + NLG+ FQL DD+LD+ ++GK +DF+NG T PVI+ +
Sbjct: 178 AGCSEENIKKLELFVKNLGLMFQLKDDILDFTSNSKDLGKETHKDFQNGIYTFPVIMTLK 237
Query: 244 RGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
RE + +S+E +++ ++ + + + + + ++ L
Sbjct: 238 NSRGREALLPIMKKNREENLSLEEIRQLQSVIVQFGGIEASYEKIKYLSDINRQLIKDLE 297
Query: 303 -DSSWKKSLMEVVD 315
+S L +++
Sbjct: 298 QNSKITIYLEKMLH 311
>gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont]
Length = 299
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 117/324 (36%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+VN + + I + + ++Y GGKRLRP L AT ML + A
Sbjct: 12 ERVNQALTRLIDPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLRAEAASLDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + +G T++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFTILADQPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + G+ L+ + A++ +A
Sbjct: 132 GVSPQDRIAMISELAQASGVAGMCCGQALDLAAEGKSVDLNQLEQIHRHKTGALIRAAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L Y +G+AFQ+ DD+LD G+ +GK G D GK T P
Sbjct: 192 LGALTAGAAGRDALPQLDIYANAIGLAFQVQDDILDVVGDTAVLGKTQGADQALGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A ++A +
Sbjct: 252 ----------------------------------ALL----GLDNARAKAQDLYREALGA 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + F ++R
Sbjct: 274 LEVLAAQSYDTSALQALASFIIER 297
>gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82]
gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82]
Length = 296
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 134/334 (40%), Gaps = 57/334 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + ++ +I + + + + + + Y +GGKRLRP+L L T +
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ AIE IHT +L+HDD+ +D+ RRGK +V+G ++L GD LL+ A
Sbjct: 62 KSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYA 121
Query: 118 FCMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + E + G+ + D+T+E + +
Sbjct: 122 FETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT+ L A++ + +++AG S ++ +++ +G+AFQ+ DD+LD + +GK IG
Sbjct: 182 KTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTSTMEVLGKPIGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T + ++
Sbjct: 242 DEKNHKSTYVT--------------------------------------YEGIEKSKQDV 263
Query: 288 YSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQR 320
+KA + L K + L E++ + + R
Sbjct: 264 ADLSEKAIAQMETL---VVKNEFLTELLRYLISR 294
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ S E + + Y + +GGKR+RP+L +A + V +AC
Sbjct: 19 DRLDSEFTNLFPSGWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVAC 78
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+H +DD RRGK V+G +++L GD LL+ AF VI+ +
Sbjct: 79 AVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARK 138
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK----------SKTAVLFSAAL 177
+ A +++ E V + + I KT+ L +L
Sbjct: 139 HGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSL 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+AG ++ ++L+++G ++G+AFQ+ DD+LD G+ +++GK + D + K T P
Sbjct: 199 MAGGHVAGCSDAQIESLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYP 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ L + + +AK
Sbjct: 259 YFI--------------------------------------GLDASRHEVERLTAEAKRV 280
Query: 298 LR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ D + L+E+ DF + R +
Sbjct: 281 ISEGNFAD-PAR--LLEIADFLMARDH 304
>gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni S3]
Length = 297
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 158/311 (50%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L L A + +
Sbjct: 1 MQKIDELIKQFLQ---ELGYEPILNMLSNVKSGKKLRSKLLLTIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA+ ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
Length = 452
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 35/343 (10%)
Query: 14 KVNFLIL--KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
K+ I +++ + +++ F GK LRP + ++ A + G + + A A+
Sbjct: 109 KIEDFIQSQRQVSGAYTPLYELLSDYPFRVGKMLRPTMCISVARAVGGMGHSALTAAAAL 168
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA---------FCMVI 122
E H A L+HDD+ D+S RRGK + G ++ VGD A V
Sbjct: 169 ELYHNAFLIHDDIEDESESRRGKGTLHQMIGIPRAINVGDATNVLAVGLLLENLSVLGVS 228
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + + ++++DY + KT L
Sbjct: 229 KALNILHEIEFMARQSVEGQAMELDWVATNPSHLSDQDYFTMCVKKTCWYSFITPCRIGL 288
Query: 183 IAGVQNSVRQA-------LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
I G S Q L +GM LGIAFQ+ DD+L+ +GE+ GK IG D GK T
Sbjct: 289 IVGHPASSVQDLIEPLAGLTRFGMILGIAFQIQDDLLNLQGEMESYGKEIGGDIYEGKRT 348
Query: 236 -LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ + + EK + + +++ M+ ++ A S QKA
Sbjct: 349 LMLNHVLANSKQEAEKMREILALPRPQKHPDHVAFIMEQMQRCGSIEHGWNVARSLAQKA 408
Query: 295 ---KDSLR-CLPDSS------------WKKSLMEVVDFCLQRL 321
DSL P++ ++ L E++++ + R
Sbjct: 409 ADIFDSLEFLFPETPLRPGEQWVSPVHDRRFLKELINYVIYRS 451
>gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
Length = 295
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 70/319 (21%), Positives = 122/319 (38%), Gaps = 52/319 (16%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+N + + SD + I + Y +F+GGKRLRP L A ML + + +LA AIE I
Sbjct: 18 LNSYFEQPLDSD-KTIKEATHYSLFNGGKRLRPFLVYAVGEMLGAKKSDLDVLAAAIECI 76
Query: 75 HTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
H+ +L+H +DD LRRG +V+G ++L GD L + AF ++ + ++
Sbjct: 77 HSYSLVHDDLPAMDDDDLRRGYPTCHIVYGEAQAILAGDALQTLAFELIATHNFNCSAQS 136
Query: 133 LSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLF--SAALEVSSLI 183
+ LA + ++ V L I A +
Sbjct: 137 QVKMIAALAHASGIEGMVAGQGLDIAATDKVVSVQELERIHKLKTGALINCAITLGALCS 196
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ L +G +G+AFQ+ DD+LD G+ +GK G D K T P +L
Sbjct: 197 EKADEQTLENLSVFGYAIGLAFQVHDDILDVEGDTFILGKPQGSDIEANKATYPALLGML 256
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +A + +A ++L +
Sbjct: 257 G--------------------------------------AKEKAQNLITQAHEALALID- 277
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ L + ++ ++R +
Sbjct: 278 -ADTTLLASLANYLIERDH 295
>gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12]
gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12]
Length = 324
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 65/328 (19%), Positives = 116/328 (35%), Gaps = 56/328 (17%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ LI + + + + + + + Y GGKR+RP+L A ++ AC
Sbjct: 35 ARAQQLIERFVPPEHPLVPQLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAAC 94
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H +L+HDD+ LRRG+ + +G ++L GD L + A+ ++
Sbjct: 95 AVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVQFGEALALLAGDALQALAYEVLTPEADI 154
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDV-----------TEEDYLHVIKSKTAVLFSAA 176
L A ++ + LD+ + +
Sbjct: 155 APALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMG 214
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
AL++YG +G+AFQ+VDD+LD + + +GK G+D + K T
Sbjct: 215 AACGGFDTARPAQTYTALETYGDAVGLAFQVVDDILDVTADSHTLGKTAGKDAQQNKSTY 274
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
L L A+ KA+
Sbjct: 275 VSAL--------------------------------------GLYAARKLAHGLRDKAQA 296
Query: 297 SLRCLPDS--SWKKSLMEVVDFCLQRLN 322
+L LP + + L E+ D + R +
Sbjct: 297 ALDTLPPPQRAASQRLRELADLIVLREH 324
>gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
Length = 293
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 124/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML T + ++V+ + + I + + +K+ GGKR+RP L A ML
Sbjct: 1 MLAQATTQYQQRVDNQLTQVIDAQSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGEMLNV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+HDD+ LRRG+ + + T++L GD L + A
Sbjct: 61 PQEKLDAAAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKT 169
F ++ + + LA+ + K KT
Sbjct: 121 FDILSQPIDGLTPTQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTQLHKLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+E+ + A + + L ++ +G+AFQ+ DDV+D E+GK G D
Sbjct: 181 GALIRCAVELPMIAADLPKDEQALLMTFADAVGLAFQVQDDVIDIISSTEELGKPQGSDC 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A S
Sbjct: 241 DSNKSTYPKLL--------------------------------------GLDGAKATAES 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q A +L LP +S + + E F ++R
Sbjct: 263 LIQDALSALTKLPYNS--QLIAEFARFIIER 291
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 292
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML+ + + + + S + + + + Y + GGKR+RP+LT A ++
Sbjct: 1 MLKTYLETSKQSIEHWLSAVLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ CA+E IHT +L+HDD+ +D+ RRG + V+G+ ++L GD LL+ A
Sbjct: 61 DASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F + E + A + + + C + + + E+ + KT
Sbjct: 121 FQLCSENTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+AA+E+ +++ + A +Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L + A+
Sbjct: 241 QDKSTYVSLL--------------------------------------GLDEARNEAHVV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
QKA +L + D L ++D+ L R N
Sbjct: 263 AQKAHAALATIED--DTHILSAIIDYLLDRTN 292
>gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 298
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/315 (21%), Positives = 116/315 (36%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + ++Y + GGKR RP L AT ML + A AIE IH +L
Sbjct: 24 LDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAYSL 83
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG+ + + T++L GD L + AF + +
Sbjct: 84 IHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSPDGETQRVAM 143
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ L+ EE A++ A +
Sbjct: 144 IQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGEKG 203
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ L+ + +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 204 LAILPQLEKFSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 256
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ +A +L +P +
Sbjct: 257 -------------------------------GLEGAMEKAHTLLHEALQALEAIPYN--T 283
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 284 QHLEEFARYVVERKN 298
>gi|56118821|ref|NP_001008170.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Xenopus
(Silurana) tropicalis]
gi|51950195|gb|AAH82488.1| MGC88978 protein [Xenopus (Silurana) tropicalis]
Length = 389
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/342 (14%), Positives = 127/342 (37%), Gaps = 32/342 (9%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGG--KRLRPMLTLATALMLE-- 58
L L ++ + + K + + ++ + + G +++R ++ L +
Sbjct: 58 SLRCLLSDELNNIAIQVRKLVGTKHPLLNTA-RTFVNEKGNNRQMRGLVVLLISKAAGLS 116
Query: 59 -------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-GKVAARLVWGNQ 104
LA E IHTA L+H +V+ + L+ + +GN+
Sbjct: 117 KSADHMFQPDLASGISARQRSLAEITELIHTAFLVHRGIVNINELKTCDGPIKDMQFGNK 176
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEA----LSLVACTLAEGELRQLSLSKNLDVTEED 160
++L GDFLL+ A + + ++ + +E + + + + +
Sbjct: 177 MAILSGDFLLANACIGLADLQNAKVVEIVSSAIGDMVKGVYYENSYMPENTFTDVNGISN 236
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
++ I L + + + + L+A + + YG ++ I+++L D+ +
Sbjct: 237 WMENIFLSHGSLLAKSCQSAMLLAHHDSEISSRAFQYGKHMSISYKLSSDLQPF------ 290
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+ + + + V+ GT+ K + + K ++ + +
Sbjct: 291 INRKYSDSLFSLNSAPVVLHQEFIGTEAWMEQIKEAQLKDNLI--DRIKLQKAIKAGKGV 348
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+G KA ++L+C P S + +L ++ + + R +
Sbjct: 349 TSATDLCCYHGDKALEALQCFPASEARSALENII-YAVTRFS 389
>gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 84-25]
gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 84-25]
Length = 297
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+K++ LI + + E+ + + ++ + GK+LR L LA A + +
Sbjct: 1 MQKIDELIKQFL---EELGYEPILNMLSNVKSGKKLRSKLLLAIAD----ESEIAFKICA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF +
Sbjct: 54 AIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+S LA GEL + L + ++ +E YL +I +KTAVL A+ +++AG+
Sbjct: 113 ASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ +++
Sbjct: 173 ---DFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQD 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + ++ ++ + E +AL A +Y +KA ++ ++
Sbjct: 230 RIYLQTLFKK-DLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKAIEKYDNNK---- 284
Query: 310 LMEVVDFCLQR 320
L +++ + R
Sbjct: 285 LNDIIKAMIDR 295
>gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421]
gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421]
Length = 399
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 59/339 (17%), Positives = 119/339 (35%), Gaps = 29/339 (8%)
Query: 4 LEDLTLKDMEKVNFLILKRIC------------SDVE---------MIPDVVKYLIFSGG 42
+ + + ++++ + + SD+ + K L+ GG
Sbjct: 56 MSEEFAQRLQRIEEALYAALPEYIDQDWVNLSFSDIPEAVLPRHILPLLKPCKDLVLRGG 115
Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
KR RP++ + +A + L IEFIHTA+L+HDD+ D + RRG A + +G
Sbjct: 116 KRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIEDSAETRRGAPAIHIQYG 175
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAEGELRQLSLSKNLD 155
T++ +L A ++ S +L L + + N
Sbjct: 176 TDTAINAASWLYFHAMSIINAYPSSSELKLSLYRTVNKNLTNLHLGQAMDIDWHRNSNFI 235
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ +Y+ +I KT L A E+ L G + ++GI FQ++DD +
Sbjct: 236 PSRAEYMAMIALKTGSLARLAAEIGFLAGGAGEEATEQYGKTMESIGIGFQILDDAKNIT 295
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G + L ++ + T I + +++ ++
Sbjct: 296 GGNKGKNIGDDIVEGKKSFPVIFHLEEHPEDLQKIQSYFETAKKEGIESQAIRECIELLN 355
Query: 276 ENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEV 313
++A + + + L P K + ++
Sbjct: 356 SSKAAERAKNYGIQMIEASVLQLCGHFPAKPAAKLIADL 394
>gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Shi470]
gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Shi470]
Length = 307
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNGK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDTILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
Length = 294
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 120/322 (37%), Gaps = 53/322 (16%)
Query: 14 KVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + R+ + D + + + Y + GGKR RP+L AT L + A A
Sbjct: 13 RVNSFMQARLDAFDADAPALKEAMSYGLILGGKRSRPLLVYATGKALGASDASLDYAAAA 72
Query: 71 IEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD+ + LRRG +G T++L GD L + F + S
Sbjct: 73 VECIHAYSLIHDDMPEMDNDELRRGHPTVHKKFGQATALLAGDALQTLGFEFASDKNSGL 132
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKTAVLFSAALEVS 180
+ E + LA+G + + H+ KT L A+ +
Sbjct: 133 SGELRGELCAVLAKGAGFSGMCGGQAMDLDAEGKHIPLERLRVLHSKKTGALIRVAVAMG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ A + L Y G+AFQ+ DDVLD G+ +GK G D K T P ++
Sbjct: 193 AVCADADEKTKAVLDEYAALTGLAFQVWDDVLDVIGDTAVIGKPAGSDEGLDKSTYPALM 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + + A QKA+D L
Sbjct: 253 --------------------------------------GLEEAKLYARQTAQKAQDKLSL 274
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S L +F + R +
Sbjct: 275 L--SLDTSILKAFAEFTVSRDH 294
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 49/321 (15%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ +V + + +D + ++Y + GGKRLRP+L LA + G + ACA
Sbjct: 16 LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD +D+ LRRGK + +G ++L GD L + AF ++
Sbjct: 76 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135
Query: 129 ALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L ++ + +T++ H+ + KT L A++ + +
Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
QAL YG +G+AFQ+VDDVLD + +GK G+D + KPT ++
Sbjct: 196 ACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTYVSLMG 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ S L DT
Sbjct: 256 LDAARDHAEALRAEAHAALAAS---------------GLADTR----------------- 283
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+L E+ D ++R +
Sbjct: 284 -------ALAELADMVVRRSH 297
>gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908]
gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018]
gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017]
Length = 307
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G++ G+AFQ++DD+LD + N +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ E+ S S E ++ +++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNPHEQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767]
gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii]
Length = 483
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G NLG+ FQ+VDD+LDY GK D + G T P++ A++ + +
Sbjct: 359 NCYDFGRNLGLCFQIVDDMLDYTSSDTSFGKPSQADLKLGLATAPILFAWKERPELGE-- 416
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
I +++ A + E L T A Y KA ++LR LP+S + +L
Sbjct: 417 ---LIARKFGEEGDVEVARKAVEECGGLEKTREMAQDYCYKALENLRVLPESDARSALEF 473
Query: 313 VVDFCLQRL 321
+ + L R
Sbjct: 474 LTNSVLTRS 482
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 55 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEADGKNVRPLIVLLLSKALSNIP 110
>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 296
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 118/324 (36%), Gaps = 55/324 (16%)
Query: 13 EKVNFLILKRIC--SDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V + + + + + + ++Y +F+GGKR+RP+L T L + A
Sbjct: 12 QRVESALDTWLPMTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTGAALNVNPISLDAPAS 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRGK + T++L GD L + AF ++ +
Sbjct: 72 AVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFYVLSHDNNL 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L +A G+ + E I A++ ++
Sbjct: 132 QNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMHIHKTGALIRASVK 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ + + L Y +G+AFQ+ DD+LD +GK G D + K T P
Sbjct: 192 MGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVESSTTVLGKAQGADIAHNKVTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + A A S
Sbjct: 252 SLL--------------------------------------GLNQAKQMAQELITDAITS 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321
L + L + ++ ++R
Sbjct: 274 LTNFDQKA--DPLRWIAEYIIKRQ 295
>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 298
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 69/315 (21%), Positives = 116/315 (36%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L ++ + + ++Y + GGKR RP L AT ML + A AIE IH +L
Sbjct: 24 LDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAYSL 83
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ LRRG+ + + T++L GD L + AF + +
Sbjct: 84 IHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSADGETQRVAM 143
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ L+ EE A++ A +
Sbjct: 144 IQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGEKG 203
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L
Sbjct: 204 LAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLL------- 256
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L +A++ +A +L +P +
Sbjct: 257 -------------------------------GLEGAMEKAHTLLHEALQALEAIPYN--T 283
Query: 308 KSLMEVVDFCLQRLN 322
+ L E + ++R N
Sbjct: 284 QHLEEFARYVVERKN 298
>gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
Length = 295
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 65/311 (20%), Positives = 117/311 (37%), Gaps = 50/311 (16%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+I + ++ + ++Y GGKRLRP+L A + + + A+E IH +L+H
Sbjct: 25 QISQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDSVQAACEAAMAAVECIHVYSLVH 84
Query: 82 DDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC- 138
DD+ + LRRGK + +G+ ++L GD L + AF ++ A L +V
Sbjct: 85 DDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLAFDILSAATELPAERQLKMVQVL 144
Query: 139 -------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+A G+ L+ A++ +A +
Sbjct: 145 AKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKTGALIRAAVQLGGLSCPQITADQL 204
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L +Y LG+AFQ++DDVLD + +GK G+D N KPT ++
Sbjct: 205 ARLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNNKPTYVKLM----------- 253
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
L A ++A L + + + L
Sbjct: 254 ---------------------------GLQAARKYAEQLVREAVTELAVFDERA--QYLR 284
Query: 312 EVVDFCLQRLN 322
++ ++ + R +
Sbjct: 285 QLAEYVVARNH 295
>gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
Length = 310
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 63/315 (20%), Positives = 112/315 (35%), Gaps = 52/315 (16%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L + + + +K+ GGKR+RP LT T + + A A+E IH +L
Sbjct: 36 LASLGHQEQPLIQAMKHGALLGGKRVRPFLTYMTGKLFGAPDEALDTPAAAVECIHAYSL 95
Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127
+HDD+ +D+ LRRG+ + + +++L GD L + AF
Sbjct: 96 IHDDLPAMDNDDLRRGQPTCHVAFDEASAILAGDALQTLAFTILAEGDLSPEGEAYRIQM 155
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + A + G+ LS + A++ A +
Sbjct: 156 VKELAAASGAAGMCLGQALDLSAEGKKVDVDTLETIHRNKTGALIRCAVRLGALAAGKKG 215
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L ++ +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 216 ATYLSQLDTFSNAIGLAFQVQDDILDIISDTETLGKPQGSDIAAEKSTYP---------- 265
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ L + +A Q+A +L +P +
Sbjct: 266 ------------------------ALL----GLEGAQQKAMLLYQEALQALDAIPYN--T 295
Query: 308 KSLMEVVDFCLQRLN 322
+ L + ++R N
Sbjct: 296 EQLEMFARYIIERKN 310
>gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
Length = 296
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 70/323 (21%), Positives = 118/323 (36%), Gaps = 55/323 (17%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V ++ R+ SD + + ++Y +GGKR+RP L T L + A
Sbjct: 12 DRVFKILNTRLPSDDTNPQSLHQAMRYGALNGGKRIRPTLVYMTGQALGAELIDLDSPAL 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRGK + +G T++L GD L +QAF +
Sbjct: 72 AVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQAFEELASHPFS 131
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA----------L 177
+ L L L + + E +I T L
Sbjct: 132 AKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHRMKTGALIKASVL 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + AL+ Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 192 LGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESDTTTLGKPQGSDLAKDKNTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L ++ + + +
Sbjct: 252 ----------------------------------ALL----GLDGSKQKLEHLLDLSLQA 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L LP + SL E+ ++ + R
Sbjct: 274 LAKLPYN--TDSLAELANYIVYR 294
>gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
16992]
gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
16992]
Length = 394
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 41/342 (11%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPD--VVKYLIFS-GGKRLRPMLTLAT 53
D+E++ I + S + I D ++ + S GGKRLR +LTL +
Sbjct: 36 SSDLEQIESRIVSLVKDFAFLHVDDSVASSCKPIADMVAMQAVTSSEGGKRLRALLTLDS 95
Query: 54 ALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
E D + LACA+E T L+HDD++DDS LRRGK +A + T
Sbjct: 96 FRAFASEDVLERDFDALLDLACAVEVFQTGALVHDDIIDDSDLRRGKPSAHRAFSTDTHS 155
Query: 108 LVGDFLLSQAFCMVIETKSQE--------------------ALEALSLVACTLAEGELRQ 147
L ++ T S + + V L
Sbjct: 156 ETIGHGLGIMLGDMLATASVDIADKAASKLTYGSNVVAALLNMHREVEVGQVLDLAVELN 215
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
N V + K+ + + ++ R+ + G+ LG+AFQL
Sbjct: 216 PLNDPNELVEASLNVFRWKTASYTTIAPLEFGMLAAGLSKDDARRHALAVGLPLGLAFQL 275
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G GK +G D R GK T+ + A ++ S +
Sbjct: 276 ADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADAINAADDGQRRELIDMWEADSRSETQV 335
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
++A + R+ A+ + R +K ++ L S ++KS
Sbjct: 336 QRAIELFRQTGAIAQSRNRIADLWHASKSAINALDLSEYRKS 377
>gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 348
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 9/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R LT+ A G++ VL A A+E IHT +L+HDD++D RR + +
Sbjct: 59 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 118
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + + A+ +A L + Q S
Sbjct: 119 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 178
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + KT L A + + +AG S +AL G ++G+AFQ VDD+L
Sbjct: 179 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 238
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A + G + ++A +
Sbjct: 239 IWGDPQVTGKPVHSDLRRLKKTFPVLAALSADHPAAGRLDALLTSAGPLDDAAARRAAEL 298
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ E T A + A+ L +P K+ L+ ++ + + R
Sbjct: 299 IDEAGGRRATVTEAEEHLTAARACLDRVPLADEAKEDLLTLIPYLVDRT 347
>gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/343 (18%), Positives = 115/343 (33%), Gaps = 36/343 (10%)
Query: 14 KVNFLILKRICSD---------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-- 62
V + + + ++ + GGKRLRP+L GD
Sbjct: 26 AVERTLDDFLDGKARDAERDDMPPEVIGTLRDFVLRGGKRLRPLLCACGWYAAGGTGDPT 85
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL--------- 113
V + A+E H L+HDD++D SA RRG+ A ++
Sbjct: 86 AVVRVGAALELFHAFALVHDDLMDRSATRRGRPAVHRALADRYRSTRDHATAERLGVGSA 145
Query: 114 -----LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--- 165
L+ + + + S + + + + + +
Sbjct: 146 ILLGDLACVWSCELLHTAPLTPRQFSALLPVVHAMRTEVMYGQYLDLLATGEPTADVRGP 205
Query: 166 -----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
L + +AG +V A +Y + LG AFQL DD+L G+
Sbjct: 206 LRVARYKTATYTCERPLHAGAALAGGPEAVLDACTAYALPLGEAFQLRDDLLGVFGDPRA 265
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK+ +D R GK T V LA +G ++ + D ++ + ++ A
Sbjct: 266 TGKSRLDDLREGKHTALVALALDQGDPGQRAELLRLVGDSELDERGAARVRALLTGTGAR 325
Query: 281 VDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRL 321
E+ + +A +L P + L ++ D +R
Sbjct: 326 AGVEHMIRARRAQALHALCTAPFPPAVA-AVLRDLADSLTERS 367
>gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
Length = 293
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 123/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML + + +V+ + +R + + + + GGKR+RP L + M
Sbjct: 1 MLVNAIKEYQLRVDDQLKQRFSTLEDTAAQLKAAMTHGALLGGKRIRPFLVYSVGQMFGV 60
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + + T++L GD L + A
Sbjct: 61 SLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKT 169
F +V E + E + LA+ + + KT
Sbjct: 121 FEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ + A Q + + +G+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + A
Sbjct: 241 ESNKSTFPQLL--------------------------------------GLQGAKDTAAQ 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP +S + + + + ++R
Sbjct: 263 LIQEALSALAKLPYNS--QLIADFARYIIER 291
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/341 (21%), Positives = 131/341 (38%), Gaps = 61/341 (17%)
Query: 1 MKMLE----DLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLAT 53
MK ++ + ++ V ++ + + + + ++Y + GGKR+R L A
Sbjct: 1 MKQIQLAFPEWLQGRVQHVEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAA 60
Query: 54 ALMLEYRGD------NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQT 105
G + A A+E IH +L+HDD +DD LRRG+ + + T
Sbjct: 61 GQACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEAT 120
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEE 159
++L GD L AF ++ AL + + A G S ++ +
Sbjct: 121 AMLAGDALQPLAFDLLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRD 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ + KT + + ++ + ++AG ++ RQAL +Y +G+AFQ+VDD+LD +
Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADST 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D KPT +L
Sbjct: 241 SLGKTPGKDAAENKPTYVSLL--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L A + A +L L L E+ DF + R
Sbjct: 263 LDGARAFAQELREDALAALAPL--GEAGSRLAELADFIVLR 301
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 72/319 (22%), Positives = 131/319 (41%), Gaps = 51/319 (15%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V+ + + + + + + Y + GGKR+RP+L L T + + +AC
Sbjct: 8 DEVDTWLKEYFKDKGTYNKSVYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIAC 67
Query: 70 AIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
AIE IHT +L+HDD+ LRRGK V+G+ +VL GD LL++AF ++++ Q+
Sbjct: 68 AIEMIHTYSLIHDDLPCMDDDLRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQK 127
Query: 129 ALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + N + E+ ++ + KTA L +A++ +
Sbjct: 128 GMTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGA 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ LK +G LG+AFQ+ DD+LD + ++GK IG+D K T
Sbjct: 188 ILGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRKLGKTIGKDKEQNKNTFVKFY- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + + L+ +
Sbjct: 247 -------------------------------------GLEKCKKMCKDLTSSCIELLQNM 269
Query: 302 PDSSWKKSLMEVVDFCLQR 320
+ K L E+ + L R
Sbjct: 270 --NKDTKELEEITLYLLNR 286
>gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 349
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 9/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R LT+ A G++ VL A A+E IHT +L+HDD++D RR + +
Sbjct: 60 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 119
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + + A+ +A L + Q S
Sbjct: 120 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 179
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + KT L A + + +AG S +AL G ++G+AFQ VDD+L
Sbjct: 180 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 239
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A + G + ++A +
Sbjct: 240 IWGDPQVTGKPVHSDLRRLKKTFPVLAALSADHPAAGRLDALLTSAGPLDDAAARRAAEL 299
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ E T A + A+ L +P K+ L+ ++ + + R
Sbjct: 300 IDEAGGRRATVTEAEEHLTAARACLDRVPLADEAKEDLLTLIPYLVDRT 348
>gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta
thermophila DSM 6192]
gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta
thermophila DSM 6192]
Length = 327
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNH 64
D+ +V LI + + S + + L K LRP + +A +
Sbjct: 9 IAPDVVRVRDLIREELGSPSGELSSALVDLASRDAKLLRPGCMVLSARFGVGEGEIPERV 68
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V LA A+E +H ATL+HDD+VDD+A RRG A +G + +VL+GD L ++A +V E
Sbjct: 69 VRLAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA---ALEVSS 181
S++ LS + +GE+ ++ + + L ++ A + +
Sbjct: 129 ASRDHAVFLSRGVRHILDGEIEEVEVRRALGRDAFSLRRYLRRILRKTGLLFVVAFHLGA 188
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
AG + V + L+ G N+G+AFQ++DDVLD G +GK +G D G P ++
Sbjct: 189 SEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG--RGLGKPVGRDVEQGVVGAPAVML 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+R +R + + G S K + + A+ + A + +A L
Sbjct: 247 ARREGERLGVWMRRACAGGVASRVWAGKVRRRLVASGAVEEARGFAQGFTARALREAGGL 306
Query: 302 PDSSWKKSLME-VVDFCLQRL 321
P W++ L E + + ++R+
Sbjct: 307 PAGRWRRVLEEVLAELVVRRV 327
>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 297
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 76/334 (22%), Positives = 129/334 (38%), Gaps = 57/334 (17%)
Query: 4 LEDLTLKDMEKVNFLIL---KRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
LE V L+ R+ S + + ++Y + +GGKRLRP+L L A
Sbjct: 6 LESFLATRQAHVESLLKSRADRLESLGTPPRLAEAMRYSLLAGGKRLRPVLCLTFADTTS 65
Query: 59 YRGDNHVL---LACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFL 113
+ ACA+E+IHT +L+HDD+ LRRG+ V+G ++L GD L
Sbjct: 66 RQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMALLAGDAL 125
Query: 114 LSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
L++AF +V L+ A + L ++++ + + + + KT
Sbjct: 126 LTEAFALVGSGPEPVRGLLCGELARAAGAAGMVGGQVLDVAEDRPAHLDYLVRLHRMKTG 185
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L AA + L AG +YG +G+AFQ+ DD+LD ++GK +G D
Sbjct: 186 ALLRAACRMGVLGAGGDAETLARATTYGDAIGLAFQIADDILDVTATAEDLGKPVGADSA 245
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G+ T P ++ L + A
Sbjct: 246 AGRFTFPAVV--------------------------------------GLEASRKLASDK 267
Query: 291 GQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRLN 322
+A ++ L L + + ++R +
Sbjct: 268 VAEAVAAVEPLEGVGGP----LAALARYVVERRS 297
>gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
Length = 323
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 9/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R LT+ A G++ VL A A+E IHT +L+HDD++D RR + +
Sbjct: 34 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 93
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + + A+ +A L + Q S
Sbjct: 94 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 153
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + KT L A + + +AG S +AL G ++G+AFQ VDD+L
Sbjct: 154 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 213
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A + G + ++A +
Sbjct: 214 IWGDPQVTGKPVHSDLRRLKKTFPVLAALSADHPAAGRLDALLTSAGPLDDAAARRAAEL 273
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ E T A + A+ L +P K+ L+ ++ + + R
Sbjct: 274 IDEAGGRRATVTEAEEHLTAARACLDRVPLADEAKEDLLTLIPYLVDRT 322
>gi|291396719|ref|XP_002714927.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2-like
[Oryctolagus cuniculus]
Length = 405
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/347 (15%), Positives = 125/347 (36%), Gaps = 41/347 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 73 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSRHNLQ-----LRGLVVLLISKA 127
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
+ LA E IHTA L+H +V+ S L+ +
Sbjct: 128 AGPSSVDVSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 187
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S S + ED
Sbjct: 188 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSTKENCITED 247
Query: 161 -----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ L + + + + +A V++ YG ++ ++ ++ D+ +
Sbjct: 248 IGISAWKEQTFLSHGALLAKSCQAAMELAKHGTEVQEKAFQYGKHMALSHKINSDLQPFI 307
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + + V+ G G+++ L++ ++
Sbjct: 308 KEKSSDSMAFNLNSA-----PVVLHQEFLGRDLWMKQLGEAQEKGRLNYTKLRET---IK 359
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G +A +L P S + +L +V F + R +
Sbjct: 360 AGKGVTSAIDLCRYHGNQALAALESFPPSEARSALENIV-FAVTRFS 405
>gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4]
gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4]
Length = 359
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 78/348 (22%), Positives = 134/348 (38%), Gaps = 38/348 (10%)
Query: 10 KDMEKVNFLILKRI----------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--- 56
D E+V + + I V+ + ++ + GGKR+RP LA
Sbjct: 11 DDGERVLATLRRHIEGRRTVVAAIDERVDRLAGLLSDFVLDGGKRMRPRFALAGWAASRP 70
Query: 57 -LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------L 99
+ V A+E I L+HDD+VD S RRG+
Sbjct: 71 DAGPAPEEVVTACAALELIQACALVHDDIVDASDTRRGRPTVHRAIESAHRRDGWDGDAA 130
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNL 154
+G ++LVGD LS A M + + A + + G++ + +
Sbjct: 131 RYGVSQAILVGDLALSWADEMFVTSGVDPAALGRALGPWHAMKTEVLSGQMLDILAEASG 190
Query: 155 DVTEEDYLHVIKSKTAVLF-SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
E+ V + KTA L + + +AG + AL+ +G+ +G AFQL DD+L
Sbjct: 191 ATDEQTPARVNRFKTAAYTVERPLHIGAELAGATDETVAALREFGVAVGQAFQLRDDLLG 250
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK G+D R GK TL + A + F + L++A +
Sbjct: 251 VFGDPEVTGKPSGDDLREGKRTLLLARAMTLAPGEDARFLAGVLGTEPDGPT-LERARAV 309
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
+ ++ A+ E +A D++ S+ + L ++ + R
Sbjct: 310 LVDSGAVASVETEIEELTARALDAIASDAISAHGRDMLRDLAEAATHR 357
>gi|224048353|ref|XP_002193223.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2 [Taeniopygia guttata]
Length = 449
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 55/344 (15%), Positives = 125/344 (36%), Gaps = 38/344 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + +R ++ L +
Sbjct: 45 SLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQ-----MRGLVILLISKA 99
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-GKVAARLVW 101
+ LA E IHTA L+H +V+ L+ + +
Sbjct: 100 AGPSTAELSFQHDMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQF 159
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-- 159
GN+ +VL GDFLL+ A + + ++ + +E +S L +G + S S +T++
Sbjct: 160 GNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIG 219
Query: 160 --DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ + + L + + + + +A ++ YG ++ ++ +L D+ + E
Sbjct: 220 ISRWKEQVFLSHSALLAKSCQAAMELAKHSAEIQDMAFQYGKHMSMSHKLHSDLQPFVKE 279
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + Q RE + GK ++ + KK ++
Sbjct: 280 TSSDTMAFSLNSAPAI-------LHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAG 332
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ + +G +A +L P S + +L +V + R
Sbjct: 333 KGVTSAIDLCRCHGNRALAALERFPPSEARDALANIV-YAATRS 375
>gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 362
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 75/361 (20%), Positives = 137/361 (37%), Gaps = 42/361 (11%)
Query: 1 MKMLEDLTLKDME------KVNFLI------LKRICSDV---EMIPDVVKYLIFSGGKRL 45
M L + +++ V + +R ++ + ++ +F+GGKRL
Sbjct: 1 MSTLTNAARPELDLLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRL 60
Query: 46 RPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
RP+L + V A ++E H L+HDD++D S RRGK
Sbjct: 61 RPLLCICGWYAGGGAGDMAAVVQAAASLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAA 120
Query: 104 QTSVLVGDFL--------------LSQAFCMVIETKSQEALEA-------LSLVACTLAE 142
S L G L+ A+ + + + + + +
Sbjct: 121 HHSALRGQEAASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY 180
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L + + + + L V + KTA L + + +AG +V +A +Y + L
Sbjct: 181 GQYLDLCAAGDPTLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPL 240
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQL DD+L G + GK + +D R K T+ + LA QR ++ + +
Sbjct: 241 GEAFQLRDDLLGVYGAPEQTGKPVLDDLRGAKHTVLLALALQRADAAQRKVLHLLLGNPG 300
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQ 319
+ + + I+ A + E + +A +L P S+ + L + D
Sbjct: 301 LDEHDAVRIRGILTATGARAEVERLIRNRHAQAHQALDQASFPPSTART-LRRIADAATV 359
Query: 320 R 320
R
Sbjct: 360 R 360
>gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
Length = 310
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 73/341 (21%), Positives = 128/341 (37%), Gaps = 58/341 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ + E + + + + + ++Y+ GGKRLRP L + +
Sbjct: 8 EEFRRRLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIES 67
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A + G + + ACA+E IH +L H +DD LRRG+ A + T++L GD
Sbjct: 68 ARLFGVEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGD 127
Query: 112 FLLSQAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDY 161
LL+ AF +V + + + + L + + +++ +
Sbjct: 128 GLLTYAFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAET 187
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+ + KT L A++ ++ G + ++AL+ YG LG AFQ+ DD+LD G+ +
Sbjct: 188 MQMQAMKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGDTAAL 247
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D GK T ++ L
Sbjct: 248 GKRAGKDAERGKAT----------------------------------LVSLL----GLD 269
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
R +A +L L + + L E F R N
Sbjct: 270 AARTRCDQLVNEATTALAELGLGNATEILAEAARFVAARRN 310
>gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
Length = 300
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 70/334 (20%), Positives = 119/334 (35%), Gaps = 55/334 (16%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + ++ + + + + ++Y + GGKR+R L L A
Sbjct: 7 LSAALREAAAEIEHTLDMLLPQEEGPEAKLYAAMRYSVLGGGKRMRGFLVLEGAAQFGVS 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A AIE +H +L+HDD+ +D+ LRRGK +G T++L GD L + AF
Sbjct: 67 RVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAILAGDALQAHAF 126
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED----------YLHVIKSK 168
++ + + + LA + + + + K
Sbjct: 127 AVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALSESAIGRLQLLK 186
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + E +++ R AL +YG LG AFQ+ DD+LD E GK G+D
Sbjct: 187 TGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDATASAEETGKATGKD 246
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK TL +L L +A
Sbjct: 247 AGAGKATLVGLL--------------------------------------GLERARVQAE 268
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ L L + D+ + R +
Sbjct: 269 RLAAQARSHLDSF--GERADLLRMLADYTIARRS 300
>gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 372
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 65/358 (18%), Positives = 117/358 (32%), Gaps = 41/358 (11%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLAT 53
L T + V + + + ++V+ + + + + +GGKR+RP
Sbjct: 17 LAAYTRDLVTAVEQTLAEFLDAEVDALATIDPAMGGFAATARDCVLAGGKRVRPTFGYWG 76
Query: 54 AL---MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ + +E +HT L+HDDV+D SA RRG+ A + Q +
Sbjct: 77 WRGAASGDEPLHRVLPALATLELLHTFALVHDDVMDHSATRRGRPTAHVAMAAQHAAAGR 136
Query: 111 DF----------------LLSQAFC---------MVIETKSQEALEALSLVACTLAEGEL 145
L A + + L
Sbjct: 137 CGDSGRFGEAVAVLIGDLCLVWADQLLARAALPASRLLDVRRGYDRMRVETIAGQYLDIL 196
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + V S + A YG+ +G AF
Sbjct: 197 GEADPENWSVDRALRVARYKTASYTVQRPLLFGASLAGVDGGTPLTDAYTRYGLAVGEAF 256
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+L G+ GK G+D R GKPT ++LA + + ++ T +
Sbjct: 257 QLRDDLLGVYGDPTATGKPAGDDLRTGKPTALLMLARELASPAQRQALDGTGSLP--GEP 314
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
+ + I+ + A+ E Q+A D+L + D + + +L + R +
Sbjct: 315 EVARLAEIVFDTGAVDRIERMIDERVQQALDALATVRIDETARTALFGLASAATDRRS 372
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 57/325 (17%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD------N 63
+ V ++ + + + + ++Y + GGKR+R +L A G +
Sbjct: 17 QHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGSTLAVGAS 76
Query: 64 HVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E IH +L+HDD +DD LRRG+ + + T++L GD L AF ++
Sbjct: 77 MDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELL 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AL + A G S +T ++ + KT + +
Sbjct: 137 AGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLAC 196
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT
Sbjct: 197 SVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPT 256
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+L L A Q A
Sbjct: 257 YVSLL--------------------------------------GLDQARALAQELRQAAH 278
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+L L +S + L ++ DF + R
Sbjct: 279 QALAPLGESGAR--LGQLADFIVLR 301
>gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449]
gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 303
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 16/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++ I + E + + +L S GK LR L L+ + M ++ + +
Sbjct: 7 LERIKAYIHTYVQECKNEEVNALYGHL--SYGKMLRSKLLLSISDM----NEDALRVCAL 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE I +A+LLHDDV+D+S RRG + +GN+ ++++GD L S+AF S +
Sbjct: 61 IEMIQSASLLHDDVIDESLTRRGIPSINATFGNKNAIMLGDVLYSKAF----YELSCLDV 116
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
V+ + + ++ K D I+ + + + A ++
Sbjct: 117 RLAQSVSSAVVRLSVGEIEDVKLSLSFHTDKERYIRMCADKTAALIVAAAECGAILKGLN 176
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ + YG NLGIAFQ++DD+LD + +GK DF+ GK TLP + ++ E+
Sbjct: 177 KNIYRIYGENLGIAFQIIDDILDITQDSQTLGKPSMSDFKEGKTTLPYMYLYEHLNADER 236
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ ++ E + +++ + + A Y KA S+ + + L
Sbjct: 237 SKLLECYGVH-LNEEKQAWIRMQLQKYNIIAQSVADAQYYANKAIQSI----VNEGNEKL 291
Query: 311 MEVVDFCLQRL 321
++V ++R
Sbjct: 292 KDIVTQMIERT 302
>gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
Length = 346
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 19/327 (5%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
+ V + + + + Y GGK +RP L L A ++
Sbjct: 22 DLVESALRPAADTLPPSMRRIAGYHFGWWDEHGRPAGADGGKAIRPALVLLAAEVVGGGA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM- 120
+ A A+E H +LLHDDV+D RR + A V+G ++L GD LL+ AF +
Sbjct: 82 AAALPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWTVFGVSPAILAGDALLTLAFDVL 141
Query: 121 --VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A S L EG+ ++ + DV + L + KT L A
Sbjct: 142 AAGGHPATPRAARIFSAAIQELLEGQHTDVAFERRQDVELAECLSMAAGKTGALLGCACA 201
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L G + + L ++G +LG+AFQ VDD+L G+ GK + D R+ K +LPV
Sbjct: 202 LGALFGGGSLAQVEHLHAFGRDLGLAFQFVDDLLGIWGDPEVTGKPVYSDLRSRKKSLPV 261
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A T + + +S +L A ++ ++ +A +A L
Sbjct: 262 VAALSSATPAGRELAGLYHGEHPLSDADLVHAAGLVDAGGGRTWSQAQADELLTRALGHL 321
Query: 299 RC---LPDSSWKKSLMEVVDFCLQRLN 322
R +P S L + +R +
Sbjct: 322 RSAGTVPGSVA--ELGALARLVTRRDH 346
>gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
clavatus NRRL 1]
gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
clavatus NRRL 1]
Length = 359
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/293 (20%), Positives = 106/293 (36%), Gaps = 5/293 (1%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+ ++I + YL GK +R L + L+ ++ I +HTA+LL DD+
Sbjct: 68 TQEKIISAPLDYLSGFPGKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASLLIDDI 127
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ +F A + + +AL + L G+
Sbjct: 128 QDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLRLHRGQ 187
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L +L E+ + S + L GI
Sbjct: 188 GMDLYWRDSLICPTEEEYLDMVSNKTGGLFRLAIKLMQMESQNERDCVPLVDLL---GII 244
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K GED GK + P+I + + + S +
Sbjct: 245 FQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPIIHSIRS--EPGNLQLMSILKQKPEDE 302
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + A I+ + + S +A++ L D L ++DF
Sbjct: 303 DVKRYAIRIIESTGSFDYCRQKLASLTAEAREMLAGFGDLEEVAGLNSILDFL 355
>gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 397
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 75/361 (20%), Positives = 137/361 (37%), Gaps = 42/361 (11%)
Query: 1 MKMLEDLTLKDME------KVNFLI------LKRICSDV---EMIPDVVKYLIFSGGKRL 45
M L + +++ V + +R ++ + ++ +F+GGKRL
Sbjct: 36 MSTLTNAARPELDLLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRL 95
Query: 46 RPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
RP+L + V A ++E H L+HDD++D S RRGK
Sbjct: 96 RPLLCICGWYAGGGAGDMAAVVQAAASLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAA 155
Query: 104 QTSVLVGDFL--------------LSQAFCMVIETKSQEALEA-------LSLVACTLAE 142
S L G L+ A+ + + + + + +
Sbjct: 156 HHSALRGQEAASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY 215
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L + + + + L V + KTA L + + +AG +V +A +Y + L
Sbjct: 216 GQYLDLCAAGDPTLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPL 275
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQL DD+L G + GK + +D R K T+ + LA QR ++ + +
Sbjct: 276 GEAFQLRDDLLGVYGAPEQTGKPVLDDLRGAKHTVLLALALQRADAAQRKVLHLLLGNPG 335
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQ 319
+ + + I+ A + E + +A +L P S+ + L + D
Sbjct: 336 LDEHDAVRIRGILTATGARAEVERLIRNRHAQAHQALDQASFPPSTART-LRRIADAATV 394
Query: 320 R 320
R
Sbjct: 395 R 395
>gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
Length = 301
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 72/317 (22%), Positives = 119/317 (37%), Gaps = 48/317 (15%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ L+ + + + ++Y GKRLRP L A + + + ACA+E
Sbjct: 25 ALDQLLPRA-DGPEARLTEAMRYAALGPGKRLRPFFALEAARLFNIDERSVLRAACALEC 83
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+H +DD +RRG+ + T+VL GD L + AF +++ + E
Sbjct: 84 VHAYSLVHDDLPCMDDDDMRRGRPTVHRAYDEATAVLAGDALQTAAFDIILHEDTHEDAV 143
Query: 132 ALSLVACTLAE------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+A L+ Q+ + + + KT LF+ A E+ +IA
Sbjct: 144 VRCELAARLSMASGARGMAGGQMIDLLGVRDDLGGVARMQRLKTGALFAYAFEIPLIIAE 203
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ AL S+ ++G+A+Q+VDD+LD G EMGK G T V L
Sbjct: 204 ASAQHQHALISFAHDVGLAYQIVDDLLDAEGSAEEMGKAAGGKDAALGKTNFVTLL---- 259
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
L R +A+ L
Sbjct: 260 ---------------------------------GLEAARQRVAHLSDQARAHLEPF--GH 284
Query: 306 WKKSLMEVVDFCLQRLN 322
+ L VDF L+R +
Sbjct: 285 EAEILKASVDFVLKRRS 301
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 56/332 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ + E++ + + + + I + + Y + +GGKR+RP+L L T +
Sbjct: 1 MDKIKKMG----EEIELWLKGYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLY 56
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 57 KEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLN 116
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSK 168
+A ++ E + +AL E+ + + + +T ++ ++ K K
Sbjct: 117 EAMNIMFEYSLKNGEKALKACYTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ +++ + + L YG NLG+AFQ+ DD+LD G+ +GK D
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T + +
Sbjct: 237 EDNHKTTFVKVY--------------------------------------GIEKCNELCT 258
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K D L + ++ K L E+ F L R
Sbjct: 259 EMTNKCFDILNKIKKNTDK--LKEITMFLLNR 288
>gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
Length = 292
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A +
Sbjct: 30 PSQRRLAEITELIHTASLLHDDVIDHSISRRSAPSANIEFGNKMAVLAGDFLLGRASVAL 89
Query: 122 IETKSQEALE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ E E L + R + T YL K+A L S
Sbjct: 90 ARLRDPEVTELLATVIANLVEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLIS 149
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++++ G V +A YG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 150 KSCRAAAILGGSTPEVVEAAYLYGKNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLA 209
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ K + ++++A I+ + L T A Y KA
Sbjct: 210 TAPLLFAWKDNKSLGK-----LVGRKFSQEGDVQRAREIVSASTGLQQTRALAQEYVDKA 264
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+++ PDS K L+++ ++R
Sbjct: 265 IEAISSFPDSEAKTGLVDMCTKVMKR 290
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
Length = 289
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 128/320 (40%), Gaps = 52/320 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V + + + + + + Y + +GGKR+RP+L LA+ + + +A
Sbjct: 8 KEVEEYLSRYFEGKDNYNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAA 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD +D+ LRRG+ ++G ++L GD LL++A ++ +
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIG 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ EAL + + + E++ ++ K KT L AA+
Sbjct: 128 KGEEALKACLMISKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + L YG LG+AFQ+ DD+LD G+ MGK D N K T +
Sbjct: 188 AILGGAPLHDVELLSQYGDKLGLAFQIEDDILDIIGDTKIMGKTSKSDLENDKCTYVTLY 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + D +
Sbjct: 248 --------------------------------------GIDKCKSICRELTDECLDIIGK 269
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + + L E+ + L+R
Sbjct: 270 IQGN--TELLKEITELLLKR 287
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 49/321 (15%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ +V + + +D + ++Y + GGKRLRP+L LA + G + ACA
Sbjct: 16 LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD +D+ LRRGK + +G ++L GD L + AF ++
Sbjct: 76 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135
Query: 129 ALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L ++ + +T++ H+ + KT L A++ + +
Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
QAL YG +G+AFQ+VDDVLD + +GK G+D + KPT ++
Sbjct: 196 ACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTYVSLMG 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ S L DT
Sbjct: 256 LDAARDHAEALRAEAHAALAAS---------------GLADTR----------------- 283
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+L E+ D ++R +
Sbjct: 284 -------ALAELADMVVRRSH 297
>gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
HPAG1]
gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
HPAG1]
Length = 307
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKTIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ D
Sbjct: 111 KAF----FELSKMGEVIAQALSNAVLRLSRGEIEDVFVGGSFNSDKQKYWCILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + ++ S S E ++ +++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHDQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 54/321 (16%)
Query: 14 KVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ + + + E + + ++Y + GGKR+RP+L A + + + + A A
Sbjct: 15 RIENSLQTLLPAADVAPERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIA 74
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD+ LRRGK + +G ++L GD L S AF ++ E +
Sbjct: 75 VELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLAD 134
Query: 129 ALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + +A G+ L+ E I A++ +A +
Sbjct: 135 TPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLG 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + + AL + +G+AFQ+VDDVLD +GK G+D N KPT I
Sbjct: 195 AYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEATTAALGKTAGKDAENNKPTYVSI 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L A ++A SL
Sbjct: 255 L--------------------------------------GSKRARELAEELRREAYASLE 276
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
++ + L +V DF + R
Sbjct: 277 MFEAAAGR--LRQVTDFIIHR 295
>gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256]
gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256]
Length = 306
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 65/332 (19%), Positives = 127/332 (38%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEK-VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L T ++ + ++ L + + + + + ++Y +GGKRLRP+L A +
Sbjct: 13 ELLRATQAEVAEGIDALFDQLLAVPADPRGPLYEAMRYAAIAGGKRLRPLLVRAAGDLFH 72
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A+E +H +L+H +DD +RRGK +G T+VL GD L +
Sbjct: 73 VDRALTLRVGAAVEAMHVYSLIHDDLPCMDDDDMRRGKPTTHKAFGEATAVLAGDSLHAL 132
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV--------TEEDYLHVIKSK 168
AF + + + + + C LA + + + K
Sbjct: 133 AFEWLCDPATSADPFVRAELCCELARAAGPAGMAGGQMMDLAAETSDFDLPTVTRLQQLK 192
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + ++E +++A + R+ L+ Y ++G+AFQ+ DD++D G+ GK + +D
Sbjct: 193 TGALIAFSVEAGAILARIPAEGRRPLRGYARDIGLAFQIADDIMDVEGDEALAGKALHKD 252
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
GK T ++ L +A
Sbjct: 253 EAAGKATFVTLM--------------------------------------GLDRARDQAT 274
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A L D + L + + ++R
Sbjct: 275 LLVEQAIAHLGGFGDEAA--LLRAIARYVVER 304
>gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
Length = 298
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 68/305 (22%), Positives = 114/305 (37%), Gaps = 54/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + + Y + +GGKR+RP+L L + M AIE IHT +L+HDD+
Sbjct: 32 LTEAMNYSMLAGGKRIRPVLMLESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAIDD 91
Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL------------EALSL 135
RRGK +G VL GD LL+ A+ + + +
Sbjct: 92 DEFRRGKKTTHAAFGAALGVLAGDALLNYAYETAMTAFDCCQDPAKVARALRVLAQKTGI 151
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+ + + + + ++ +KTA L A L + +++AG A++
Sbjct: 152 GGMLGGQSVDVENEKNGVFQLERKTIDYIYVNKTAALLEAPLMIGAILAGADEKTVSAMQ 211
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G G+AFQ+ DDVLD + E+GK IG D +N K T ++
Sbjct: 212 EIGHRAGLAFQIADDVLDVTSTLEELGKPIGSDEKNNKTTYVTLM--------------- 256
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ A ++A + L + D + L E++
Sbjct: 257 -----------------------GVEGAREEAERLTREAVELLASM-DGEH-EFLKELLL 291
Query: 316 FCLQR 320
F R
Sbjct: 292 FMADR 296
>gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
ER-3]
gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 520
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 258 PAQRRLAEITELIHTASLLHDDVIDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVAL 317
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E LS V L EGE QL ++ ++ I K+A L S
Sbjct: 318 ARLRDPEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 377
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ + +A SYG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 378 KSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 437
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 438 TAPLLFAWRGNPELGA-----LVGRKFSGEGDVQLARQIVAQSDGLEQTRALAQEYTDKA 492
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+++ LPD+ K L+E+ +R
Sbjct: 493 IEAISILPDTEAKAGLVEMCVKLTKR 518
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ L + K+++ + I + + S ++ V KY S GK +RP+L L +
Sbjct: 129 IDPLR-IVAKELKFMKKNIRQLLGSGHPLLDRVAKYYTSSEGKHVRPLLVLLMSQA 183
>gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
SLH14081]
gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
SLH14081]
Length = 520
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 258 PAQRRLAEITELIHTASLLHDDVIDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVAL 317
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E LS V L EGE QL ++ ++ I K+A L S
Sbjct: 318 ARLRDPEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 377
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ + +A SYG NLG+AFQLVDD+LDY E+GK G D G
Sbjct: 378 KSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLA 437
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 438 TAPLLFAWRGNPELGA-----LVGRKFSGEGDVQLARQIVAQSDGLEQTRALAQEYTDKA 492
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
+++ LPD+ K L+E+ +R
Sbjct: 493 IEAISILPDTEAKAGLVEMCVKLTKR 518
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ L + K+++ + I + + S ++ V KY S GK +RP+L L +
Sbjct: 129 IDPLR-IVAKELKFMKKNIRQLLGSGHPLLDRVAKYYTSSEGKHVRPLLVLLMSQA 183
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 125/313 (39%), Gaps = 55/313 (17%)
Query: 21 KRICSDVEMI--PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
K + E + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++
Sbjct: 28 KSLKKRTEPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSS 87
Query: 79 LLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S +
Sbjct: 88 LIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIR 147
Query: 137 AC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A + DV E + KTA L AA + +++
Sbjct: 148 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMG 207
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 208 GGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLI---- 263
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
L + A ++A++ L +S
Sbjct: 264 ----------------------------------GLERSREVAEKLSREAEEQLLGF-ES 288
Query: 305 SWKKSLMEVVDFC 317
L+ + +
Sbjct: 289 DKAAPLVALASYI 301
>gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 306
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + +++V + + +D + D ++Y + GKRLRP+L LA A +
Sbjct: 16 DLSAWSAQALQRVEEALEAWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAAAEAVSGHA 75
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AC++E IH +L+HDD +D+ LRRGK + +G ++L GD L + AF
Sbjct: 76 GAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGDALQALAFE 135
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVL 172
++ L ++ + +D ++E++ + + KT L
Sbjct: 136 LLTPEDDVPEAMQARLCRLLARAAGADGMAGGQAIDLASVGIALSEDELRRMHRLKTGAL 195
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+++ + + + AL YG LG+AFQ+VDDVLD + +GK G+D +
Sbjct: 196 LQSSVLMGAACGAAAPAAWDALSRYGAALGLAFQVVDDVLDVVADSATLGKTAGKDAASD 255
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
KPT +L L A +
Sbjct: 256 KPTYVSLL--------------------------------------GLDQARAYAAALRD 277
Query: 293 KAKDSL--RCLPDSSWKKSLMEVVDFCLQRL 321
+A +L L + + L + D + R
Sbjct: 278 EAHAALQGSGL---AGTRVLAALADMVIDRS 305
>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 296
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 126/323 (39%), Gaps = 55/323 (17%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
EK+ ++ K + ++I + ++Y + +GGKRLRPML T + +G
Sbjct: 12 EKIEEILRKYLPDQTGHQQIIEEAMEYSLMAGGKRLRPMLMKETFDLFGGKGGVIEPFMA 71
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF
Sbjct: 72 AIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILTGDALLNYAFETACSAFET 131
Query: 128 EALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ ++ + G S ++ E + + KT L A++
Sbjct: 132 DPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGELLAFIYRLKTGALIEASV 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++AG + ++ +G+AFQ+ DD+LD +GK + D +N K T
Sbjct: 192 MIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDVTSTTEILGKPVHSDEKNEKTTYV 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ L + A ++A +
Sbjct: 252 TW--------------------------------------KGLEKAKEEAARLTEEAVEE 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
LR + + E++ + R
Sbjct: 274 LRSI--GKECGFMEELLRRLVYR 294
>gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
Length = 206
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ L+ VN + + MI + ++Y + +GGKR+RPML +A ++
Sbjct: 68 EFKEYVLEKAVSVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVE 127
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACA+E IHT +L+HDD +D+ LRRGK ++G +VL GD LL+ AF
Sbjct: 128 STAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFE 187
Query: 120 MVIET 124
+
Sbjct: 188 HIATH 192
>gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
Length = 299
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 76/334 (22%), Positives = 132/334 (39%), Gaps = 56/334 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSD-----VEM-IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++ +V I +R + V + ++Y + +GGKRLRP L L+ A +
Sbjct: 4 KERLAAQAAEVEVYIRERFGARMRERGVPEGLLSAMEYSLMAGGKRLRPCLCLSFAELFG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + A E IHT +L+H +DD LRRG+ + V+G ++L GD LL++
Sbjct: 64 APRASVMPFAAGFELIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDALLTE 123
Query: 117 AFCMVIETK---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF + + A + A + G++ + + VT + H+
Sbjct: 124 AFGCMSRSWPAVAAELVLPALAEAGRAAGAAGMVGGQMLDMEFTARQGVTLAELAHMQAL 183
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +A+ +++AG + YG +G AFQ+VDD+LD G+ MGK +G
Sbjct: 184 KTGALITASCVCGAILAGAAEDGISRAREYGEAVGAAFQIVDDILDEVGDAATMGKPVGS 243
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L ++ A
Sbjct: 244 DREQGKSTYPSLV--------------------------------------GLNESRRLA 265
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A ++ D L ++ + + R+
Sbjct: 266 GQRVDAALAAIAAY-DGPAADFLRDLARYIVVRV 298
>gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
Length = 287
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 145/281 (51%), Gaps = 16/281 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GK +R ++ N LA +E IH A+LLHDDV+D++ RRG +
Sbjct: 22 KGKGIR-------GKIITIINPNAKKLAAIVEGIHLASLLHDDVIDEADTRRGVKSINAK 74
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+G+ T+V++GD + S F + +E + +S L+EGEL + LSKN+++ ++
Sbjct: 75 YGDFTAVMLGDIIYSTCF-YDLVDFDKEVAKIISNAVRLLSEGELEDVKLSKNINLDKDK 133
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
Y+ +I KTA L A+ + S+ + N + +YG N+GIAFQ++DD+LD +
Sbjct: 134 YMQMIYKKTASLIEASCKASAFL---SNYDVEKFGTYGRNIGIAFQIIDDLLDIIQDSKT 190
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK DF GK TLP I F++ +EK S K+S + ++ +M++ L
Sbjct: 191 IGKPSMHDFYEGKTTLPFIYLFEKVNDKEKEKLISLYKK-KLSNDEIEWIRELMKKYGVL 249
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A + ++AKD+++ + L + D ++R
Sbjct: 250 EKCYFEAKNLVEEAKDAIKDYKITK----LENIADKIVERK 286
>gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 357
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 13/293 (4%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + V ++E +H +LLHDD++D RR + A V
Sbjct: 63 GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDLMDGDETRRHRATAWTV 122
Query: 101 WGNQTSVLVGDFLLSQAFCM---------VIETKSQEALEALSLVACTLAEGELRQLSLS 151
+G +VL GD L + + + A+ ++ L +G+ +S
Sbjct: 123 FGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLITTATRRLIDGQALDVSFE 182
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ VT E+ L + KT L +A+ + +++AG + V AL+ YG +LG+AFQ VDD+
Sbjct: 183 QRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAVDDL 242
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST---INDGKISVENLK 268
L G GK D ++ K +LPV A G + G+ L
Sbjct: 243 LGIWGATEVTGKPHWSDLQSRKKSLPVCAALAEGGTASRELAAQLADPTGRGEEDEHVLA 302
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
++ T+ A A +L +P ++ + + +F + R
Sbjct: 303 ARAALIERAGGRAWTQEEARRQYDTALAALGEVPMADEVREHFVALAEFVVVR 355
>gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24]
gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24]
Length = 364
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 69/341 (20%), Positives = 122/341 (35%), Gaps = 31/341 (9%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLL 67
D ++ I D++ + + L+ +GGKRLR ++ V
Sbjct: 23 NDFLATRQSVMSAISQDIDPLMGSISNLV-TGGKRLRALMCYWGWRGAGGEAAATEVVTA 81
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS----------------VLVGD 111
A+E A L+HDD++D S RRG + + +L GD
Sbjct: 82 GSALELFQAAALIHDDIIDRSDTRRGGPSVHRRFSQLHEDQGWALDSERFGHAAAILTGD 141
Query: 112 FLLSQAFCMVIE---------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
LS + + + V L +++
Sbjct: 142 LCLSFSEETFTDIGEAAASGSQARLIFNLMRAEVMAGQYLDILEEVAGPMRDRAGAVSRA 201
Query: 163 HVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
I L + +AG + + + ++ + LG AFQL DDVL G+
Sbjct: 202 QSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAFALPLGEAFQLRDDVLGVFGDPVT 261
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK G+D R GK T+ V A + + E F + + +S +++++ I+ + AL
Sbjct: 262 TGKPAGDDLREGKRTVLVAFALDQASPEESRFLDAKLGSPDLSDDDVEEIRRIIVDCGAL 321
Query: 281 VDTEYRAYSYGQKAKDS-LRCLPDSSWKKSLMEVVDFCLQR 320
TE +G+ A D K +L ++ + + R
Sbjct: 322 QATEVLIEEFGRAAFAELDLLPLDDLPKTALRKLAEATVSR 362
>gi|290965788|gb|ADD70278.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia
albicollis]
Length = 376
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/337 (16%), Positives = 124/337 (36%), Gaps = 37/337 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + +R ++ L +
Sbjct: 45 SLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQ-----MRGLVVLLISKA 99
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-GKVAARLVW 101
+ LA E IHTA L+H +V+ L+ + +
Sbjct: 100 AGPSTAELSFQHDMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQF 159
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-- 159
GN+ +VL GDFLL+ A + + ++ + +E +S L +G + S S +T++
Sbjct: 160 GNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIG 219
Query: 160 --DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ + + + L + + + + +A ++ YG ++ ++ +L D+ + E
Sbjct: 220 ISRWKEQVFLRHSALLAKSCQAAMELAKHSAEIQDMAFQYGKHMSMSHKLHSDLQPFVKE 279
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + Q RE + GK ++ + KK ++
Sbjct: 280 TSNDTMAFSLNSAPAI-------LHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAG 332
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +G +A +L P S + +L +V
Sbjct: 333 KGVTSAIDLCRCHGNRALAALERFPPSEARDALANIV 369
>gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum]
gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum]
Length = 307
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 8/291 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + Y++ + GK +R L A L + + +E +H A+LL DD+ D
Sbjct: 21 DEKLLQPFTYIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIVEMMHNASLLLDDIQD 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ ++++ A V+E EA+ + L G+
Sbjct: 81 NSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEAVSVYTQQVLELHRGQGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ + ED + + ++ + + + + LG+ FQ
Sbjct: 141 EIYWRDSYTCPTEDEYKQMTIRKTGGL---FMLAIRLMQLFSENKADYTKLTGILGLFFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ + + K+ ED GK + P+I A ++ N + E
Sbjct: 198 IRDDFLNLYSKDYMLHKSYCEDLTEGKFSFPIIHAIH--SQPNDNQVIHILRQRTKDNEV 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
K ++ + + T+ Q+A+D + L ++ + + EV+++
Sbjct: 256 KKYCVSLLEKYGSFDYTKKVLAELKQEAQDEVDKLGENPY---MAEVMEYI 303
>gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
Length = 297
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 57/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ +++ +N +IL+ + + + I + + Y + +GGKR+RPML L +
Sbjct: 1 MSDFKNELEQEVVFINDIILRYLPEETGLDKKIRESMNYSVNAGGKRVRPMLMLEVYKLC 60
Query: 58 EYRGDNHVLLACAI-EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
V A E IH+ +L+HDD+ +D+ RRG++ V+G +L GD LL
Sbjct: 61 GGNDCQVVYPFMAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAGDGLL 120
Query: 115 SQAFCMV----------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ A+ ++ IETK++ G ++EE +
Sbjct: 121 NLAYEIMAEALVSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQLDFI 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ KT L AA + +AG + L +G AFQ+ DD+LD + E+GK
Sbjct: 181 FRLKTGALIEAAFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEELGKP 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+ D +N K T + + E
Sbjct: 241 VFSDEKNNKTTYVTLY--------------------------------------GMEKAE 262
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
S +A D ++ + + + L E+V + R
Sbjct: 263 ADVESMSDEALDIIKSVGKNEF---LEELVLNLIHR 295
>gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3]
Length = 300
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 71/340 (20%), Positives = 131/340 (38%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + S E++ + ++Y + +GGKR RP L +
Sbjct: 1 MHEFTTLLAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + + A+E +H +L+HDD+ D+ LRRGK + T++L G
Sbjct: 61 SAALFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYL 162
+ LL+ AF ++ + + + L + + + E +
Sbjct: 121 NALLTFAFEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATI 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L A + +++ ++ L S+G +G+AFQL DD+LD +G
Sbjct: 181 TLQQMKTAALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLTSHTKILG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K +G+D K TL + L +
Sbjct: 241 KTVGKDQIANKATLINLY--------------------------------------GLDE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + KA++ L LP + L + F R N
Sbjct: 263 VKKKRDELITKAEELL--LPFGAKAIPLKQAAHFIATRKN 300
>gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401]
gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 5 str. 8401]
Length = 299
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSPDTSALEALADYIIQR 297
>gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 384
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 62/349 (17%), Positives = 115/349 (32%), Gaps = 41/349 (11%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLAT 53
L T ++ V+ + + ++VE + ++ + + +GGKR+RP
Sbjct: 29 LAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFAATARDSVLAGGKRVRPTFAYWG 88
Query: 54 AL-MLEYRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN------- 103
++ + + A+E +HT L+HDDV+D S RRG A
Sbjct: 89 WRGVVGGEEPLCSVLPALSALELLHTFALVHDDVMDASDTRRGLPTAHRAAAARHRAAGH 148
Query: 104 ------------------QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
+ + + + L
Sbjct: 149 TGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAGQFLDVL 208
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + + V A + + A YG+ +G AF
Sbjct: 209 GENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGLAVGEAF 268
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+L G+ GK G+D R GKPT ++LA Q ++ + + S
Sbjct: 269 QLRDDLLGVYGDPETTGKPAGDDLRTGKPTALLMLARQLADPAQRRVLERAGS--VTSAT 326
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV 313
+ + ++R+ A E +A +L P D + + +L +
Sbjct: 327 EVDRLADVVRDTGATARVERMISDRVTEALAALGTAPIDETARTALTGL 375
>gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
Length = 301
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 74/340 (21%), Positives = 131/340 (38%), Gaps = 57/340 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + S E + ++Y + +GGKRLRP L +
Sbjct: 1 MHEFTTLLAKHGHTVESRLSTLLSDHIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + +ACA+E +H +L+HDD+ LRRGK + + T++L G
Sbjct: 61 SAALFDIPVEHSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--------KNLDVTEEDYL 162
+ LL+ AF ++ + + + + LA+ L + D +
Sbjct: 121 NALLTFAFEIIAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDII 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L S A + ++I + L ++G LG+AFQL DD+LD +G
Sbjct: 181 TLQRMKTAALISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDVTANTQTLG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K T + + +
Sbjct: 241 KTAGKDETAQKATFVRLY--------------------------------------GIEE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
T+ + + KA+ L D+ L + F R +
Sbjct: 263 TQKKREALLTKAEALLYPFDDAKAL-PLQQAARFSATRKH 301
>gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 356
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 37/319 (11%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---------- 56
L ++E+++ I + + S+ E + + KY + GK++RP L L +
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKATSLFHGIDRS 95
Query: 57 ----------------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ + LA E IH A+LLHDDV+D + +RRG ++ +
Sbjct: 96 VVGDKYTDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSNVA 155
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQE------ALEALSLVACTLAEGELRQLSLSKNL 154
+GN+ S+L G+F+L++A ++ ++ + + A + L S +
Sbjct: 156 FGNRRSILAGNFILARASTVMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIK 215
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ Y+ KTA L S + + S+++ +V A YG +G AFQL+DDVLDY
Sbjct: 216 QSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDY 275
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ + +GK G D + G T PV+ A+++ + + ++++A ++
Sbjct: 276 TSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNH-----PSDIQRARSLV 330
Query: 275 RENRALVDTEYRAYSYGQK 293
+ A+ A Y +K
Sbjct: 331 ECSDAIEQPITWAIEYIKK 349
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML+ + + + + S + + + + Y + GGKR+RP+LT A ++
Sbjct: 1 MLKTYLETSKQSIEHWLSAVLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ CA+E IHT +L+HDD+ +D+ RRG + V+G+ ++L GD LL+ A
Sbjct: 61 DASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F + E + A + + + C + + + E+ + KT
Sbjct: 121 FQLCSENTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+AA+E+ +++ + A +Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L + A+
Sbjct: 241 QDKSTYVSLL--------------------------------------GLDEARNEAHVV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
QKA +L + D L ++D+ L R +
Sbjct: 263 AQKAHAALATIED--DTHILSAIIDYLLDRTH 292
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 72/330 (21%), Positives = 121/330 (36%), Gaps = 57/330 (17%)
Query: 9 LKDMEKVNFLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M V + + ++ + ++Y GGKR+RP+L A + +
Sbjct: 17 ADWMRGVQAQLEAALARNLPPGEAIPGRLHQAMRYASLDGGKRVRPLLVFAAGDLTDAAR 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ L A A+E IH+ +L+HDD+ LRRG+ + + T++LVGD L S AF
Sbjct: 77 ERLELAASAVELIHSYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGDSLQSLAFE 136
Query: 120 MVIETKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ + L +V C +A G+ L E L A+
Sbjct: 137 LLAREDFGDGARQLEMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELELMHALKTGAL 196
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ +A + + + + R+AL + G+ FQ+VDD+LD +GK G+D
Sbjct: 197 IRAAVILGALCGTPLSTTEREALDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDAAT 256
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
KPT +L L A
Sbjct: 257 EKPTYVSLL--------------------------------------GLERARELAADLR 278
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A +L + L+E+ DF +R
Sbjct: 279 AQALQALNLF--GERSQRLVELTDFITRRK 306
>gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 54/312 (17%)
Query: 21 KRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+ + + + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L
Sbjct: 7 RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66
Query: 80 LHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD +D++ LRRGK V+G +VL GD LL+ AF + S + A
Sbjct: 67 IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA 126
Query: 138 C------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ DV E + KTA L AA + +++ G
Sbjct: 127 VVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGG 186
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++
Sbjct: 187 GTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLI----- 241
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
L + A ++A++ L +S
Sbjct: 242 ---------------------------------GLERSREVAEKLSREAEEQLLGF-ESD 267
Query: 306 WKKSLMEVVDFC 317
L+ + +
Sbjct: 268 KAAPLVALASYI 279
>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 293
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + V+ +L I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLSLFLEHYKKVVDESLLTEINKRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALQ 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V +A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VDPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ + G + ++N VT + + KT
Sbjct: 121 AFSILAEDENLSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+G+ FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P ++ L +
Sbjct: 241 FMNKSTYP----------------------------------ELLT----LDGAKSALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HISIAKSALSGHGFDD----EILLKLADLIALREN 293
>gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 301
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 72/339 (21%), Positives = 120/339 (35%), Gaps = 55/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + E L ++ + +++ I + ++Y GGKRLRP L AT M
Sbjct: 1 MVVFEQLLKTYHQRADAALIQYIEPLPFADGQLVAAMRYGALLGGKRLRPYLVYATGEMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
DN A A+E IH +L+HDD+ LRRG+ + + +G ++L GD L +
Sbjct: 61 GLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNLRRGQPTSHIKFGEAHAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ ++ + + L + G+ L +
Sbjct: 121 LAFSILADSPMPDVAVSDRLAMLSELAQASGVAGMCGGQALDLEAEGKYVDLQSLERIHN 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ A + + L Y +G+AFQ+ DD+LD G+ + GK
Sbjct: 181 HKTGALIRCAIRMGALAAGDTGRAALPLLDRYAAAIGLAFQVQDDILDVIGDSEKTGKPQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D K T P ++ L +
Sbjct: 241 GSDQELEKSTYP----------------------------------ALL----GLKQAQN 262
Query: 286 RAYSYGQKAKDSLRCLPD--SSWKKSLMEVVDFCLQRLN 322
+A Q A L L S +L + F ++R N
Sbjct: 263 KALDLYQDAIQVLEELEQHHSIDTLALKSLASFIIERDN 301
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +D + + + + + S + E + + + Y + GGKR+RP+LT A ML
Sbjct: 1 MFKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F ++ A + L + C + + + E+ + KT
Sbjct: 121 FQLMTSNTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+A++E+ ++ N+ R L Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L +++AY
Sbjct: 241 QHKSTYVSLL--------------------------------------GLEQAKHQAYLV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G +A D+L + S L ++D+ L+R N
Sbjct: 263 GSQAHDALNLV--SYDTTILSALIDYLLERTN 292
>gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus
H88]
Length = 522
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 260 PAQQRLAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVAL 319
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E LS V L EGE QL ++ ++ I K+A L S
Sbjct: 320 ARLRDPEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 379
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G
Sbjct: 380 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLA 439
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 440 TAPLLFAWRANPELGA-----LVGRKFSGEGDVQLARQIVSQSDGLEQTRALAQEYTNKA 494
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
S+R LPD+ K L+E+ +R
Sbjct: 495 IQSIRILPDTEAKTGLIEMCAKLTKR 520
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ L + K+++ + I K + S ++ V KY S GK +RP+L L +
Sbjct: 131 IDPLR-IVAKELKFMKKNIHKLLGSGHPLLDRVAKYYTTSEGKHVRPLLVLLMSQA 185
>gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
G186AR]
Length = 521
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A +
Sbjct: 259 PAQQRLAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVAL 318
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFS 174
+ E +E LS V L EGE QL ++ ++ I K+A L S
Sbjct: 319 ARLRDPEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 378
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G
Sbjct: 379 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLA 438
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P++ A++ + + +++ A I+ ++ L T A Y KA
Sbjct: 439 TAPLLFAWRANPELGA-----LVGRKFSGEGDVQLARQIVSQSDGLEQTRALAQEYTNKA 493
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320
S+R LPD+ K L+E+ +R
Sbjct: 494 IQSIRILPDTEAKTGLIEMCAKLTKR 519
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ L + K+++ + I K + S ++ V KY S GK +RP+L L +
Sbjct: 130 IDPLR-IVAKELKFMKKNIHKLLGSGHPLLDRVAKYYTTSEGKHVRPLLVLLMSQA 184
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 127/314 (40%), Gaps = 57/314 (18%)
Query: 24 CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTAT 78
DV I + ++Y +GGK LRP+L +A A + A A+E +HT +
Sbjct: 33 GPDVPPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYS 92
Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----- 131
L+HDD+ +RRG+ A +V+G ++L GD LL+ AF ++ A
Sbjct: 93 LIHDDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALA 152
Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + L G++ L + + + + KT LF A + + + +AG
Sbjct: 153 VAEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGA 212
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+AL +Y G AFQ+VDD+LD G+ E+GK +G D R GK T+P ++
Sbjct: 213 GEGELEALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLV------ 266
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
L A ++A SL L D +
Sbjct: 267 --------------------------------GLERARRLAAEATERAVASLDPLGDRAA 294
Query: 307 KKSLMEVVDFCLQR 320
L + L+R
Sbjct: 295 --LLAWLARSLLER 306
>gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
Length = 303
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 131/334 (39%), Gaps = 57/334 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++++ +I + + + + I + + Y I +GGKRLRPML T +
Sbjct: 9 DIRAEIQTRVDEIEQIIKRYLPEEEGWQKTIMEAMNYSILAGGKRLRPMLMSETYRLFGG 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A+E IHT +L+HDD+ +D+ RRGK V+G +L GD LL+ A
Sbjct: 69 KSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNYA 128
Query: 118 FCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + E A + G++ + + D+T+E + +
Sbjct: 129 FETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLDFIYRL 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +++ + +++AG + + ++ +G+AFQ+ DD+LD + +GK IG
Sbjct: 189 KTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTSTLEVLGKPIGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T L +
Sbjct: 249 DEKNHKATYVSFE--------------------------------------GLEKAKEDV 270
Query: 288 YSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQR 320
Y A + L K + L E++ + + R
Sbjct: 271 ALYTNSAVARMDSL---VVKNEFLNELLLYLISR 301
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ L K E ++ + + + + +I + ++Y +F+GGKRLRP LTLA A +
Sbjct: 3 LQALAAKA-ETIDAALDRYLRQASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAP 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L G L + AF
Sbjct: 62 ERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAF 121
Query: 119 C 119
Sbjct: 122 E 122
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 16/288 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+E + + V + + I E + + Y + +GGKR+RP+L L+T L
Sbjct: 5 EIEQFLNEQKQAVEAALSRYIAQLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQN 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL+ AF
Sbjct: 65 PSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E + + L + + + ++ + KT
Sbjct: 125 QLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ ++ +L+ G + L + +LG+AFQ+ DD+LD G ++GK +G D
Sbjct: 185 GKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRVGSDR 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN---LKKAFIIM 274
N K T P +L+ ++ + + + + L ++
Sbjct: 245 ENHKATYPALLSLAGAKEKLAFHIDAAKRHLQQADVDGATLAYICELV 292
>gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227]
gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227]
gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74]
Length = 299
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSPDTSALEALADYIIQR 297
>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 168
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++ + + V + + + + E+I + ++Y +F+GGKRLRP+L L++ +L
Sbjct: 1 MFKEKLREKQQLVEKELHRILDIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 61 IKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGY 120
Query: 119 C 119
Sbjct: 121 E 121
>gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces
cinnamonensis]
Length = 352
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 66/350 (18%), Positives = 124/350 (35%), Gaps = 37/350 (10%)
Query: 1 MKMLEDLTLKDM-EKVNFLILKRICSDVEM---IPD-------VVKYLIFSGGKRLRPML 49
+ L T +++ E++ + + ++ E+ + + + L+ +GGKR+RP
Sbjct: 10 LTALARRTREELLEQMEDRLRAFLRAEHELWAEVNERAVGAVAALTDLVAAGGKRIRPAF 69
Query: 50 TLATALMLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT-- 105
+A L D+ ++A A E +H + L+HDDV+D S+ RRG+
Sbjct: 70 CIAGYLAAGGDPDDTAVVAAAAALEMLHASALIHDDVIDASSHRRGRPTVHARHSALHDR 129
Query: 106 -SVLVGDFLLSQ------------AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
+ + ++ L + L G+ ++ +
Sbjct: 130 NAWQGESRRYGEGVAILVGDLALVYSEQLMAAAPPAVLPVWGTLRSELMIGQYMDMTAAA 189
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
V + +K+ V A + + A YG +G AFQL DD+L
Sbjct: 190 EFLVDPRLSRWIALAKSGHYTIHRPLVVGASAAGRADLAPAFAKYGEAVGEAFQLRDDLL 249
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
D G+ GK G DF K TL + A QR + + +
Sbjct: 250 DAFGDFAHTGKPAGLDFSQHKMTLLLSWAMQRDARIHSLITEPGHTP--------DEVRR 301
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ + D E ++ +++ +P D W+ L + R
Sbjct: 302 RLVDTGVPDDVEKHIAGLVEQGCEAIADVPIDPVWRTELTTMATQAAYRT 351
>gi|290965822|gb|ADD70311.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia
albicollis]
Length = 376
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 54/337 (16%), Positives = 124/337 (36%), Gaps = 37/337 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + +R ++ L +
Sbjct: 45 SLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQ-----MRGLVVLLISKA 99
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR-GKVAARLVW 101
+ LA E IHTA L+H +V+ L+ + +
Sbjct: 100 AGPSTAELSFQHDMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQF 159
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-- 159
GN+ +VL GDFLL+ A + + ++ + +E +S L +G + S S +T++
Sbjct: 160 GNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIG 219
Query: 160 --DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ + + + L + + + + +A ++ YG ++ ++ +L D+ + E
Sbjct: 220 ISRWKEQVFLRHSALLAKSCQAAMELAKHSAEIQDMAFQYGKHMSMSHKLHSDLQPFVKE 279
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + Q RE + GK ++ + KK ++
Sbjct: 280 TSSDTMAFSLNSAPAI-------LHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAG 332
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +G +A +L P S + +L +V
Sbjct: 333 KGVTSAIDLCRCHGNRALAALERFPPSEARDALANIV 369
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK + + + K + S E I ++Y I +GGKRLRP L AT +L
Sbjct: 1 MKDFQVYLKEKTSFFETELKKELQELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 QNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + E I
Sbjct: 121 AFYILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ ++ L+ Y +G+AFQ+ DD+LD G E+GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+KAK+ + + K L+ + DF R
Sbjct: 263 NDTVEKAKEIIKNNFGEEKGK-ILISLADFIKDR 295
>gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99]
gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99]
Length = 307
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 136/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G++ G+AFQ++DD+LD + N +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ +++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99]
gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99]
Length = 293
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 124/331 (37%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML D + ++V+ + K + + +K+ GGKR+RP L A ML
Sbjct: 1 MLVDTITRYQQRVDSQLEKIFDNQTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGDMLSI 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A AIE +H +L+HDD+ LRRG+ + + ++L GD L + A
Sbjct: 61 PLKQLDSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDALQALA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKT 169
F ++ E + A + LA+ + K KT
Sbjct: 121 FEVMCEPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLHKLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+E+ + A V + L + +G+AFQ+ DDVLD +E+GK G D
Sbjct: 181 GALIRCAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLDIISSTDELGKPQGSDC 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L+ + A S
Sbjct: 241 ESNKSTYPQLL--------------------------------------GLMGAQATAKS 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A +L LP +S + + E + ++R
Sbjct: 263 LIEDALSALTKLPYNS--QLIAEFARYIIER 291
>gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 295
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/332 (20%), Positives = 125/332 (37%), Gaps = 54/332 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D K E+ +I + ++ + + Y + +GGKRLRPML T + +
Sbjct: 2 NFQDELAKRTEETEKVIRSFLPAEAGFAGTMAQAMNYSMLAGGKRLRPMLIRETYRLFDG 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +E IHT +L+H +DD RRG++ V+G VL G LL+ A
Sbjct: 62 KEEVVKPFMAGMEMIHTHSLIHDDLPALDDDDYRRGRLTTHKVYGEAMGVLSGVALLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT--------EEDYLHVIKSKT 169
+ + + + + + A + + + V E++ L I
Sbjct: 122 YETMFQAFALTKEQDRVIHALRVVSQKTGIHGMLGGQSVDVENDGKPLEKEMLDYIYRNK 181
Query: 170 A-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ +++AG A++ N+G+AFQ+ DD+LD E+GK + D
Sbjct: 182 TSALIEASMMTGAILAGANEQEVSAVEKAAGNIGLAFQIQDDILDVTSTAEELGKPVHSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+N K T + +
Sbjct: 242 EKNNKVTYVTLF--------------------------------------GTEKAAEQVE 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KA D L+ L ++ + L +++ + R
Sbjct: 264 ELSEKAIDLLKSLNKNN--EFLYLLIEKLINR 293
>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 341
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/345 (23%), Positives = 135/345 (39%), Gaps = 66/345 (19%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLAT 53
L+ + +++V + I +D + D ++Y + GGKRLRP+L LA
Sbjct: 38 ELDTWMRERLDRVERALEAWITADAPQGVDHGAPAALVDAMRYAVLDGGKRLRPLLVLAA 97
Query: 54 ----ALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV 107
A + + ACA+E IH +L+HDD +D+ LRRGK + +G +++
Sbjct: 98 HEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEASAL 157
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEE 159
L GD L + AF + + + LA +TE
Sbjct: 158 LAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARAAGSSGMAGGQAIDLASVGLPLTEN 217
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ + KT L ++ + + A V L++YG +G+AFQ+VDD+LD +
Sbjct: 218 QLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLEAYGAAIGLAFQVVDDILDVTADSA 277
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D N KPT ++
Sbjct: 278 TLGKTAGKDADNDKPTYVSLM--------------------------------------G 299
Query: 280 LVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
L + A S +A D+L LPD++ +L + + R +
Sbjct: 300 LQASRDYALSLYTQALDALDASGLPDTA---ALRALAGMVVHRAH 341
>gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus
lactolyticus ATCC 51172]
gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus
lactolyticus ATCC 51172]
Length = 330
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
K+++D K E++ ++ S + D++K + S GK LR L ++ +LM +
Sbjct: 13 KLIDDCVSKVHEEIKNILSDYKSSQN--LCDIIKDALTSSGKMLRTKLLISISLMGDGEI 70
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E H A+L+HDD++DDS LRR + + +G +V GD+++++ F
Sbjct: 71 SKKVISQAAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSY 130
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ ++ + GE+ Q + LD+ E++Y I KTA F
Sbjct: 131 LANENLYDEIKVIANTIKHMCNGEVGQNLIKYRLDMGEDEYFENISGKTASFFKTVCYFG 190
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV-I 239
+ AG + + ++G NLG+ FQL DD+LD GK D R G T PV +
Sbjct: 191 ARNAGFGQMDTERMVAFGENLGLMFQLKDDLLDLFSNKLITGKEEFSDIREGIYTYPVLL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
E + + K+ + L ++ +++A T + + + L
Sbjct: 251 GLKDEDYGEEIHRILLENKERKLGEDELISLRKLLIKSKADTLTALKIRDLADENRFILA 310
Query: 300 CLPDSSWKKSLMEVVDFC 317
+ D L ++++
Sbjct: 311 SI-DGKDVMYLEKILEKV 327
>gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
Length = 367
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/361 (19%), Positives = 130/361 (36%), Gaps = 46/361 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPD------------VVKYLI-----------F 39
L + + I + S E + + ++Y +
Sbjct: 2 TLTSTLQATLLRHQQAIDSALHSAFERLAERDDTHNLQEYYGQMRYHLGWVDRHFQATRS 61
Query: 40 SGGKRLRPMLTLATALMLEYRGD--------NHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GK +R L L + + A A+E H TL+HDD+VD R
Sbjct: 62 NPGKLMRSTLLLLAYEAVGAWEQTSNPDYLRRALPAAAAVELTHNFTLIHDDIVDGDTER 121
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVIETKSQEALEALSLVACTLAEG 143
R + VWG + GD + + + V + L +AEG
Sbjct: 122 RHRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEGVEADIAARLGACLDKACLVVAEG 181
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ +S D++ Y+ +I+ KTA L + + E+ + + L+S+G +GI
Sbjct: 182 QYLDMSFEGRQDISVAMYIDMIRRKTAELMACSAEMGARLGTRDAEAIARLRSFGEAIGI 241
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKI 262
AFQ+ DD+L E+GK D K +LP++ A ++ T E+ +
Sbjct: 242 AFQVRDDLLGVWASSEELGKTEAGDIYRRKQSLPILHAREQATPEEQATLTRIYQQVEPL 301
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS------WKKSLMEVVDF 316
E + + I+ ++A+++L +P + + ++DF
Sbjct: 302 EKEQVDEVLAILERTGTRDYCRQFLAQQSERAREALASVPAQQAEVSIRAMEDMRVLIDF 361
Query: 317 C 317
Sbjct: 362 V 362
>gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 332
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70
++ V + + I + ++ + GK +RP LTL + + + ++L +
Sbjct: 20 LQNVLIEMSESWRIGFSEIDNAIRSQASA-GKLVRPALTLLFSELTDAPYNQKAIVLGAS 78
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE +H ATL+HDD++D+S LRRG+ + + +G T+V GD+LL+ ++ + + +A
Sbjct: 79 IELLHLATLIHDDIIDESKLRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLNDADNIQAN 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + GEL Q D + ++ L I KTA LF ++ + + +S
Sbjct: 139 KLALEALRNILFGELTQKHNRYLTDTSFDNCLTQITGKTAALFKLSVLFGATSSDGVSSQ 198
Query: 191 R-QALKSYGMNLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRNGKPTLPVILAFQRGTK 247
+ G NLGIAFQL+DD LD+ ++ GK G+D RNG T P++ A +
Sbjct: 199 LLDVVGKLGENLGIAFQLLDDYLDFESITEQLSLGKPAGQDIRNGIYTAPILFALENPDI 258
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + DG I+ + L ++ E+ A+ Y Q+ D L LP+++ +
Sbjct: 259 NAELKDLLALRDG-ITDDQLVHIHNVVLESDAMSRLNSLLAEYSQELDDLLNKLPNNALR 317
Query: 308 KSLMEVVDFCLQRLN 322
+ L + L R N
Sbjct: 318 QKLSHLATLLLNRKN 332
>gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
Length = 298
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 11/275 (4%)
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ LA E IH A+LLHDDV+D++A RRG A L GN+ ++L GDF
Sbjct: 28 AHEAPDDVRRRQQRLAEIAEMIHVASLLHDDVLDNAATRRGLRALNLEVGNKLAILAGDF 87
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL++A + ++ E +E LS V L GE+ Q++ + E Y+ KTA L
Sbjct: 88 LLARASVTLASLRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMEHYVKKTYYKTASL 147
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + + +L+ G YG NLG+AFQ DDVLD+ G + +GK D + G
Sbjct: 148 IANSSKAIALLGGHGEKSADLAYDYGKNLGLAFQFQDDVLDFIGSESILGKPTLGDLKEG 207
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
T PV+ A + + ++ + ++++A ++++++ + T+ A +
Sbjct: 208 IATAPVLFAVEEFPELQE-----LVERRFKHSGDVQRAHELVKKSKGIARTQELAREHRD 262
Query: 293 KAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
A ++ LP S +++L E+ ++R
Sbjct: 263 LAIAAIDALPVSESSYANKCRRALKELARRSVERS 297
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 54/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++ + + + + + S + + + + + Y + GGKR+RP+L+ A ML
Sbjct: 1 MFKEYLAASKQNIEQWLGEVLTSPNQEFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA 120
Query: 118 FCMVIETK--------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
F ++ K A + + G+ + + E+ + + KT
Sbjct: 121 FQLMTANKTATAQEKLDAIQCVATAAGPEGMVGGQAFDMLSEN-KHIPLEELQVLHRGKT 179
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LF+A++E+ ++ + R AL Y LG+ FQ+ DD+LD G + E+GK G D
Sbjct: 180 GALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGKTPGSDI 239
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R K T +L L + +A S
Sbjct: 240 RQHKSTYVSLL--------------------------------------GLEGAKEQAAS 261
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G++A ++L + S L ++D+ L+R N
Sbjct: 262 VGKQAHNALNSV--SYDTSILAALIDYLLKRTN 292
>gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
Length = 303
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/338 (21%), Positives = 122/338 (36%), Gaps = 62/338 (18%)
Query: 5 EDLTLKDMEKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ +E+ I + S + + + Y + +GGKR+RP+L LA A
Sbjct: 6 QQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCLAAAEQ 65
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH-------------DDVVDDSALRRGKVAARLVWGN 103
+ LA A E+IHTA+L+H +
Sbjct: 66 CGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLAGDALL 125
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ L + + A ++ + G++R + ++ ED
Sbjct: 126 AWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRD-TDPQSQSEDPEDVWL 184
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ ++KT+VL +AL +L+AG + SV A YG +LG AFQ+VDDVLD G+ +GK
Sbjct: 185 IARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLDVLGDSATLGK 244
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D R GK T + L
Sbjct: 245 TAGKDARQGKRTFVSVY--------------------------------------GLERA 266
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A + A SL + L+++V+ ++R
Sbjct: 267 KELAEQESRLAVASLEGI--CPEDDPLVDLVESLVERT 302
>gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83]
Length = 307
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKVLNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + ++ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHDQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d]
Length = 307
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQTLSNAVLRLSRGEIEDMFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3]
gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3]
Length = 293
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 125/321 (38%), Gaps = 53/321 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++N L+ RI + + +K+ GGKR+RP L A ML + + A
Sbjct: 11 QRINQLLATRIDALDDIDPKLKAAMKHGALIGGKRIRPFLVYAIGEMLNVKLETLDSCAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ LRRG+ + + T++L GD L + AF ++ E
Sbjct: 71 AIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAYDEATAILAGDALQALAFEIISEPIKN 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLD--------VTEEDYLHVIKSKTAVLFSAALEV 179
A + LA + + + K KT L A+E
Sbjct: 131 IAPSQNLAMVKALANASGYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEF 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + A + + RQAL + +G+AFQ+ DDVLD E+GK G D + K T P +
Sbjct: 191 AIIAAKINDDERQALVDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDTDSNKSTYPKL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + A S + A +L
Sbjct: 251 L--------------------------------------GLEGAQQTASSLIEDALSALA 272
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP +S + + E + + R
Sbjct: 273 KLPYNS--QLIAEFARYIIVR 291
>gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Scheffersomyces stipitis CBS 6054]
gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Pichia stipitis CBS 6054]
Length = 465
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + + +G NLG+ FQ+VDD+LDY GK D + G T P++ A++
Sbjct: 334 AHDDIIENCYEFGRNLGLCFQIVDDMLDYTASDATFGKPSQADLKLGLATAPILFAWKEQ 393
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + I +++ A +++ L T A+ Y KA +LR LP+S
Sbjct: 394 PELGE-----LIARKFSEPGDVEIARNAVKKYSGLEKTREMAHEYCYKALQNLRVLPESD 448
Query: 306 WKKSLMEVVDFCLQR 320
+ +L + + L R
Sbjct: 449 ARSALEFLTNSVLTR 463
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 38 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLLLSKSL 89
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
++ + VN + + + I + ++Y + +GGKR+RP+L +A ++
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 65 VLLACAIEFIHTATLLHDDVVDDS 88
+ ACA+E IHT +L+HDDV +
Sbjct: 75 MPAACAVEMIHTMSLIHDDVYGED 98
Score = 42.6 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A+D L DS L+ + ++ R N
Sbjct: 226 GLEKSREFAEKLNTEARDQLLGF-DSDKVAPLLALANYIANRQN 268
>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
Length = 292
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 54/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +D + + + + + S + + + + + Y + GGKR+RP+L+ A ML
Sbjct: 1 MFKDYLASSKQHIEQWLGEVLTSPNREFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 DPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGLLTYA 120
Query: 118 FCMVIETK--------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
F ++ + A + + G+ + S++ + E+ + + KT
Sbjct: 121 FQLMTANETATAQEKLDAIQCVATAAGPEGMVGGQAFDML-SEDKHIPLEELKVLHRGKT 179
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LF+A++E+ ++ + R AL Y LG+ FQ+ DD+LD G + E+GK G D
Sbjct: 180 GALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGKTPGSDI 239
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R K T +L L + + +A
Sbjct: 240 RQHKSTYVSLL--------------------------------------GLDEAKNQASL 261
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G++A D+L + S L ++D+ L+R N
Sbjct: 262 VGKQAHDALNSV--SYDTSILAALIDYLLERTN 292
>gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 364
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/344 (22%), Positives = 128/344 (37%), Gaps = 41/344 (11%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPDV-VKYLIFS--GGKRLRPMLTLAT 53
D+E++ I + S I D+ K + S GGKRLR +LTL +
Sbjct: 4 SSDLEQIESRIVSLVKDFAFLHADDSVASSCRPIADMVAKQAVTSSEGGKRLRSLLTLDS 63
Query: 54 ALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
E D + LACA+E T L+HDD++DDS LRRGK +A + T
Sbjct: 64 FRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDIIDDSDLRRGKPSAHRAFSTGTHS 123
Query: 108 LVGDFLLSQAFCMVIETKSQE--------------------ALEALSLVACTLAEGELRQ 147
L ++ T S + + V L
Sbjct: 124 EAIGHGLGIMLGDMLATASVDIADKAASKLTHGSDVVAALLNMHREVEVGQVLDLAVELN 183
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ V + K+ + + ++ R+ + G+ LG+AFQL
Sbjct: 184 PLDDPDELVEASLNVFRWKTASYTTIAPLEFGMLAAGIGKDDARKQALAVGLPLGLAFQL 243
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G + GK +G D R GK T+ + A ++ S +
Sbjct: 244 ADDLLDVVGSSSNTGKPVGGDIREGKRTVLLADAINAANDTQRRELIDMWEADSRSETQV 303
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
K+A + + A+ + R ++K ++ L S + +SL+
Sbjct: 304 KRAIELFEQTGAIERSRGRIADLWNESKTAIETLSLSEYHESLL 347
>gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60]
Length = 301
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/327 (19%), Positives = 115/327 (35%), Gaps = 55/327 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + +++ + + + ++Y GGKRLRP L AT + A
Sbjct: 13 QRADAALIQALDTLPFADGPLVGAMRYGALLGGKRLRPYLVYATGGLFGCSPTALDAPAA 72
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +LLH +DD LRRG+ + +G ++L GD L + AF ++ +
Sbjct: 73 AVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGPMP 132
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L + G+ L A++ A
Sbjct: 133 GVADRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVR 192
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ AL Y +G+AFQ+ DD+LD G+ ++ GK G D + K T P
Sbjct: 193 MGALAGGDAGRRALPALDRYAAAIGLAFQVQDDILDVVGDSSKTGKRQGADQQLDKSTYP 252
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L +A + +A +
Sbjct: 253 ----------------------------------ALL----GLDQARQKAATLLDEALQA 274
Query: 298 LRCLPD--SSWKKSLMEVVDFCLQRLN 322
L L + ++L + F ++R N
Sbjct: 275 LAELEQRHNLDTQALKSLASFIVERDN 301
>gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255]
Length = 308
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/331 (22%), Positives = 117/331 (35%), Gaps = 62/331 (18%)
Query: 13 EKVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ ++ K + SD + + D ++Y GGKRLRP L + ++ + +
Sbjct: 19 DETEAVLEKLL-SDAPLPDEIARPRRLTDAMRYSSLGGGKRLRPFLVVESSAVFGVPREA 77
Query: 64 HVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+L A+E IH +L+HDD+ LRRG+ + T++L GD LL+ AF ++
Sbjct: 78 ALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAGDGLLTLAFDII 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLS----------LSKNLDVTEEDYLHVIKSKTAV 171
+ + L+ LA + D D V + KT
Sbjct: 138 TRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVDVARVQQMKTGA 197
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +L+ QAL +YG LG AFQ+ DD+LD + +GK G D
Sbjct: 198 LLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDVESDAAALGKPTGADAAL 257
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T L + + R
Sbjct: 258 GKTTFVTQL--------------------------------------GIDGAKKRVRDLL 279
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KA ++L S L F R N
Sbjct: 280 AKADEALSVF--GSRGDVLRAAAHFVANRKN 308
>gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S]
gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S]
Length = 305
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/302 (19%), Positives = 115/302 (38%), Gaps = 50/302 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVD 86
+ + +++ GGKRLRP+L A + + ++ + + A+E IH +L+H +D
Sbjct: 42 RLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECIHVYSLVHDDLPAMD 101
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL--------VAC 138
D +RRGK + T++L GD L AF ++ + ++
Sbjct: 102 DDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFVRIELVKALAVASGT 161
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
+ G ++ + + KT L + ++ ++++A + R L Y
Sbjct: 162 SGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMALIPPEGRMRLHGYA 221
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
++G+AFQ+ DD+LD G+ GK +G+D GK T +L
Sbjct: 222 RDIGLAFQIADDLLDVEGDAVLAGKALGKDAAAGKETFVSLL------------------ 263
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A ++AK L L + D+ +
Sbjct: 264 --------------------GVERAREQARLLVEQAKAHLHG--HGPEADLLRAIADYIV 301
Query: 319 QR 320
+R
Sbjct: 302 ER 303
>gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 335
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 8/280 (2%)
Query: 42 GKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
GK LRP L L A + V LA +E IH A+L+HDD++DD+ RRGK A +
Sbjct: 54 GKMLRPRLLLLCASLGPAWHAHQREAVELAAMVELIHLASLIHDDIIDDARFRRGKPAIQ 113
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+G +V GDF++++ ++ L+ + GE+ Q L D T+
Sbjct: 114 SRYGKDAAVYAGDFIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEIGQARLRHRPDATQ 173
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
Y IK KT LF+AA + ++ G + L +G LGI FQL DD+LD+
Sbjct: 174 AMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQLRDDLLDFTAAP 233
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-STINDGKISVENLKKAFIIMREN 277
E GK++ +D R G TLP+++A + + E + +
Sbjct: 234 LEDGKDVCQDVREGIYTLPLLIALADDKAGAALRPLLAANRKAPLDFEGIVAVRGAIDSC 293
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDS----SWKKSLMEV 313
L T Y ++A L P K+ L +
Sbjct: 294 GGLEQTRQAIRMYREQATAILDDFPSGHSLKRIKRLLSRL 333
>gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SJM180]
gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SJM180]
Length = 307
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKAIQNRIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 IDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQALSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G++ G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ +++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 61/341 (17%)
Query: 1 MKMLE----DLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLAT 53
MK ++ + + V ++ + + + ++Y + GGKR+R L A
Sbjct: 1 MKQIQLAFPEWLQGRVRHVEDVLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAA 60
Query: 54 ALMLEYRGD------NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQT 105
G + A A+E IH +L+HDD+ LRRG+ + + T
Sbjct: 61 GQACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEAT 120
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEE 159
++L GD L AF ++ AL + + A G S ++ +
Sbjct: 121 AMLAGDALQPLAFELLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRD 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
D + KT + + ++ + ++AG ++ RQAL Y +G+AFQ+VDD+LD +
Sbjct: 181 DLQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSA 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D KPT +L
Sbjct: 241 SLGKTPGKDAAENKPTYVSLL--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + A + A +L L D+ + L E+ DF + R
Sbjct: 263 LDEARAFAGELREAALAALEPLGDAGSR--LAELADFIVLR 301
>gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
Length = 394
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/368 (19%), Positives = 121/368 (32%), Gaps = 51/368 (13%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-------EMIPDVV---KYLIFSGGKRLRPMLTLA 52
L V+ + D + + + GGKR+RP A
Sbjct: 26 DLRAPLKDVPAAVDRALDAYFDHSAAEFSAIAPEFNDAMAVLRGFVMGGGKRVRPTFAWA 85
Query: 53 TALML------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL- 99
+ + +L A+EF+ L+HDD++D+S RRG
Sbjct: 86 GFRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALIHDDIIDESDTRRGNPTTHRV 145
Query: 100 ----VWGNQTSVLVGDFLLSQAFCMVIETKSQ----------------EALEALSLVACT 139
+ +SQA S +
Sbjct: 146 FESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATAGLSPSIVDRVRGPWRAMRTE 205
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYG 198
+ G+ ++L N + D + VI KTA A + + +AG + L YG
Sbjct: 206 VLAGQQLDIALENNGSESIADAMQVINFKTASYTVARPLHIGAALAGADERTIELLLEYG 265
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWK 254
+G AFQL DD L G+ GK G+D R GK T+ V AF + + + +
Sbjct: 266 TLVGQAFQLRDDQLGVFGDPAVTGKPSGDDLRTGKRTVLVNTAFAECSPEQLARLRGDFG 325
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLME 312
+ + E + + I+++ A E + ++A + L DS + L+
Sbjct: 326 PLPGAAEHTAEQIDRMRQIIQDCGAAQQIEDKINDLSERAITLVEESWLEDS-ISEELVA 384
Query: 313 VVDFCLQR 320
R
Sbjct: 385 FARLLSDR 392
>gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 128/322 (39%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + + S + + + ++Y + GGKR+RP+L A ++ + AC
Sbjct: 13 ARTEAALEAALPSTDTIPYTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGATPEACDAAAC 72
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + T++LVGD L SQAF ++ +T +
Sbjct: 73 AVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQAFIVLAQTPAL 132
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH-------VIKSKTAVLFSAALEVS 180
A L +VA + + +D+ + + KT L A++ +
Sbjct: 133 AAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEGMHRMKTGALLRASVRMG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L + + AL Y +G+AFQ+VDD+LD + +GK G+D N KPT +L
Sbjct: 193 ALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAANDKPTYVSLL 252
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L A A ++L
Sbjct: 253 --------------------------------------GLDAARELAAQLRTDAHEALEG 274
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R N
Sbjct: 275 FGTRAGR--LAELADLIVLRSN 294
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++++ S E + + Y + +GGKR+RP+L +A + V +AC
Sbjct: 22 DRLDSEFTNLFPSGWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVAC 81
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+H +DD RRGK V+G +++L GD LL+ AF VI+ +
Sbjct: 82 AVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARK 141
Query: 128 EALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAAL 177
+ A + A + + +T + L I KT+ L +L
Sbjct: 142 HGVPAERVLSIVEDLAVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSL 201
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+AG +S ++L+++G ++G+AFQ+ DD+LD G+ +++GK + D + K T P
Sbjct: 202 MAGGHVAGCSDSQIESLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYP 261
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ L + + +AK
Sbjct: 262 YFI--------------------------------------GLDASRHEVERLTAEAKRV 283
Query: 298 LR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ D L+E+ DF + R +
Sbjct: 284 ISEGNFADP---TRLLEIADFLMARDH 307
>gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
Length = 307
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKTIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D +A+RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKAAMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ D +
Sbjct: 111 KAF----FELSKMGESIAKSLSNAVLRLSRGEIEDVFVGGSFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ +R++ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQRDQGLLISYFKQD--SHEIIEWTKEKFKQYGTIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/302 (22%), Positives = 109/302 (36%), Gaps = 48/302 (15%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85
E + + ++Y + +GGKR+RP+L + +A + + + A AIE IHT +L+HDD+ +
Sbjct: 35 ERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAM 94
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAFCMVIETKSQEALEALSLVAC 138
D+ RRGK + +G ++L GD + E E
Sbjct: 95 DNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEGSAEQVLAVVRELAHATGL 154
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ KT L A+ + +++AG +A+ Y
Sbjct: 155 AGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAISRYA 214
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LG+ FQ+VDDVLD G +GK G D GK T +
Sbjct: 215 TELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVF------------------ 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
L A + ++A +L L + L + F
Sbjct: 257 --------------------GLEGARREADAACERALRALGRL-EGRDTSRLEALALFVR 295
Query: 319 QR 320
R
Sbjct: 296 DR 297
>gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498]
Length = 300
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K + V + + + E++ + +++ + +GGKRLRP L +
Sbjct: 1 MHEFTTLLAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + + A+E IH +L+HDD+ D+ LRRG+ + + T++L G
Sbjct: 61 SAALFDISPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYL 162
+ LL+ AF ++ + + + L + + + E +
Sbjct: 121 NALLTFAFEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATI 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L A + +++ ++ L S+G ++G+AFQL DD+LD +G
Sbjct: 181 TLQQMKTAALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLDLTSHTKILG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K TL + +L +
Sbjct: 241 KTAGKDQIANKATLINLY--------------------------------------SLDE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + KA++ L LP + L + F R N
Sbjct: 263 VKKKRDELITKAEEFL--LPFGAKAIPLKQAAHFIATRKN 300
>gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces
melanosporofaciens]
Length = 359
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/311 (21%), Positives = 108/311 (34%), Gaps = 27/311 (8%)
Query: 38 IFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
SGGKR+RP+L + + + +A +E H L+HDDV+DDS RRG+
Sbjct: 50 FLSGGKRIRPLLCVTGWQAVGGGEDTEPVFRVAACLEMFHAFALIHDDVMDDSDTRRGRP 109
Query: 96 AARLVWGNQTSV-----------------------LVGDFLLSQAFCMVIETKSQEALEA 132
+ D LL A ++ + L +
Sbjct: 110 TIHRTLAALCATDRRPEQIERFGVSGAVLLGDLALTWSDELLHSAGLTPVQFDAVLPLLS 169
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
L + Q + DV ++ L V + IAG +
Sbjct: 170 EMRTEVMLGQYLDLQATGELTDDVEATLTVNR-YKTAKYTIERPLHVGAAIAGAGPEAME 228
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A +Y + LG AFQL DD+L G+ GK+ +D R GK T + LA + +
Sbjct: 229 AFTAYALPLGEAFQLRDDLLGVYGDPESTGKSQLDDLRAGKNTTLIALALRGSDSTQAAR 288
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLM 311
+S I + + + I A E +A +L P + +L
Sbjct: 289 LRSLIGNPLLDERDAATIQEIFAATTARDAVEQMIDDRRTQALRALDDAPFTADAVNALK 348
Query: 312 EVVDFCLQRLN 322
++ R +
Sbjct: 349 QIARLATVRNS 359
>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
Length = 294
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 124/324 (38%), Gaps = 53/324 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y GGKR+RP+L A + A
Sbjct: 11 LERVETALGHYLPAETVAPAQLHEAMRYAALGGGKRVRPLLCHAAGELTGASEAALNAAA 70
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ LRRGK + + T++LVGD L SQAF + + +
Sbjct: 71 AALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALTDAAA 130
Query: 127 QEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+LV +A G+ L+ + + A+L ++
Sbjct: 131 LPLDRQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRASVRM 190
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +AL +Y +G+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 191 GALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTY-- 248
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I+ L + A A+ +L
Sbjct: 249 --------------------------------VSII----GLDASRALAAQLRADARAAL 272
Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L E+ D + R++
Sbjct: 273 EPFGARARR--LAELADLVVNRVS 294
>gi|198427915|ref|XP_002128884.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
subunit 2 [Ciona intestinalis]
Length = 410
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/343 (16%), Positives = 109/343 (31%), Gaps = 35/343 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ K+ + + R ++ L A
Sbjct: 68 SLRALLSDELSAVALHLRKLVRTKHPLLKTARGILFDSKHNVQT-----RGLIVLLFAKS 122
Query: 57 ----------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---N 103
L ++ LA E IHTA L+H + L + N
Sbjct: 123 IAQHKSASLNLNEIYNSQRTLAELTELIHTAFLVHRGLTGVDTLMKQDSNNSRSEMELGN 182
Query: 104 QTSVLVGDFLLSQAF--------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
+ +VL GDFLL+ A V+ S + G+ + L
Sbjct: 183 KMAVLSGDFLLANACVALSELRNSKVVNMMSSSIADMSHGFFILPESGDSPDPTSLSILP 242
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ +D+ I L S A + +A + S+G NL +A Q D+
Sbjct: 243 TSRKDWEDAIFLSQGSLISNACLSAVELANQNGEFAECASSFGKNLILAQQARADMQRIT 302
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF---I 272
N N + + + + ++ D ++ + K
Sbjct: 303 CINNNTNNNGNFNHYSTELSALPVVLLANKHGGSDWLKNFVYVDDVTNMSLVMKQKLSSE 362
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ ++N L + E + A +L LP ++SL +
Sbjct: 363 VSKQNSVLEECEEICRHHRDSALSALNVLPPGEARESLKLLTK 405
>gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 328
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDN 63
L ++ V + + S+V + +Y G GKRLRP + L A L
Sbjct: 79 SLVADELSLVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIPE 138
Query: 64 HV--------------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
+ +A E IH A+LLHDDV+DD+ RR + V GN+ +VL
Sbjct: 139 QIVGDTLAAELRTRQQCIAEITEMIHVASLLHDDVLDDAETRRSISSLNFVMGNKVAVLA 198
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
GDFLLS+A V K+ E + L++ L GE Q++ + + E Y+ KT
Sbjct: 199 GDFLLSRACVAVASLKNTEVVSLLAIAVEHLVTGETMQMTCTSEQRCSMEYYMKKTYYKT 258
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L S + + +L+AG V YG NLG+AFQL+DDVLD+ G +GK D
Sbjct: 259 ASLISNSCKAIALLAGQTTEVATLAFEYGKNLGLAFQLIDDVLDFTGTFASLGKGSLSDI 318
Query: 230 RN 231
R+
Sbjct: 319 RH 320
>gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SM4/1]
Length = 298
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ L+ + ++ + + + I + + Y + +GGKRLRP+L +
Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+G AIE IHT++L+HDD +D+ RRGK + +G +VL GD LL A
Sbjct: 62 QGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA 121
Query: 118 FCM------------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ + G N V E +
Sbjct: 122 VETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKLDFIY 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +
Sbjct: 182 RLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T + L +
Sbjct: 242 GSDEKNHKTTYVTLE--------------------------------------GLENARA 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ +A L LP + + L ++ + R
Sbjct: 264 KSERLSDEAVRLLHSLPGKN--EFLEGLIRLLIYR 296
>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 303
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/338 (19%), Positives = 125/338 (36%), Gaps = 58/338 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML- 57
+ + ++ LI + + + I + + Y + +GGKRLRPML +
Sbjct: 5 ETFKQELKTRTAEIEQLIKTYLPEESGHQKTILEAMNYSMMTGGKRLRPMLMQEMCRLFT 64
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ + A+E IHT++L+HDD +DD +RRGK + +G VL GD L+
Sbjct: 65 GCLLESVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIGVLTGDALMM 124
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL------------DVTEEDYLH 163
AF R+ + + + ++
Sbjct: 125 YAFETAASAFETSIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGGPIPKDKLDF 184
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ + KT L A++ + +++ G + + ++S +G+AFQ+ DD+LD G +GK
Sbjct: 185 IYRLKTGALIEASMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDVTGSEEVIGK 244
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+ D +N K T + L
Sbjct: 245 PVNSDEKNKKTTYVTLE--------------------------------------GLDKA 266
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +A + L LP ++ + L +++ + R
Sbjct: 267 KKDVEQISAEAIEELNKLPGNN--EFLEQLIHVLINRQ 302
>gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
Length = 295
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/325 (19%), Positives = 115/325 (35%), Gaps = 55/325 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+VN + +++ + + ++Y + +GGKR+RP+L A L + AC
Sbjct: 11 ARVNAALEPLFVAPSPEMKRLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAAC 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------- 119
A+E IH +L+H +DD LRRG+ + ++L GD L S AF
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSALLDPALS 130
Query: 120 --MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A + + G+ + + A++ +A
Sbjct: 131 SVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGALIEAAVH 190
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + ALK+Y + +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 191 LGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L +A D+
Sbjct: 251 ALLGLAAAKAYALVLR--------------------------------------DQALDA 272
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
LR + + L ++ + ++R +
Sbjct: 273 LRPFD--AAAEPLRDLARYIVERRH 295
>gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1]
gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1]
Length = 298
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ L+ + ++ + + + I + + Y + +GGKRLRP+L +
Sbjct: 2 ELKEQLLQYTRETEEIVFSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+G AIE IHT++L+HDD +D+ RRGK + +G +VL GD LL A
Sbjct: 62 QGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA 121
Query: 118 FCM------------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ + G N V E +
Sbjct: 122 VETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKLDFIY 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +
Sbjct: 182 RLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T + L +
Sbjct: 242 GSDEKNHKTTYVTLE--------------------------------------GLENARA 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ +A L LP + + L ++ + R
Sbjct: 264 KSERLSDEAVRLLHSLPGKN--EFLEGLIRLLIYR 296
>gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 332
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 6/315 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70
++ V + + I + ++ + GK +RP LTL + + + ++L +
Sbjct: 20 LQNVLIEMSESWRIGFSEIDNAIRSQASA-GKLVRPALTLLFSELTDAPYNQKAIVLGAS 78
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE +H ATL+HDD++D+S LRRG+ + + +G T+V GD+LL+ ++ + + +A
Sbjct: 79 IELLHLATLIHDDIIDESKLRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLNDADNIQAN 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + GEL Q D + ++YL I KTA LF ++ + + +S
Sbjct: 139 KLALESLRNILFGELTQKHNRYLTDTSFDNYLTQITGKTAALFKLSVLFGATSSDGVSSQ 198
Query: 191 R-QALKSYGMNLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRNGKPTLPVILAFQRGTK 247
+ G NLGIAFQL+DD LD+ ++ GK G+D RNG T P++ A +
Sbjct: 199 LLDVVGKLGENLGIAFQLLDDYLDFESITEQLSLGKPAGQDIRNGIYTAPILFALENPDI 258
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + DG I+ + L ++ E+ A+ Y Q+ D L LP+++ +
Sbjct: 259 NAELKELLALRDG-ITDDQLVHIHNVVLESDAMSRLNSLLAEYSQELDDLLNKLPNNALR 317
Query: 308 KSLMEVVDFCLQRLN 322
+ L + L R N
Sbjct: 318 QKLSHLATLLLNRKN 332
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/331 (21%), Positives = 127/331 (38%), Gaps = 50/331 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L+ + ++ + + + + + Y + +GGKR+RP+ LA +
Sbjct: 3 EPLKYFIESNTPQIEETMFSLVEQIDAPADLKESMLYSLKAGGKRIRPLFVLAVLELYRE 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +++ IE IHT +L+HDD+ RRGK V+G + L GD L + A
Sbjct: 63 NLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + ++A G + + + V +KT
Sbjct: 123 FGILARMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKTGA 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++E +++A V R LK Y ++G+AFQ+ DD+LD G E+GK G+D +
Sbjct: 183 LLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVAS 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + + +
Sbjct: 243 DKSTYPALLT--------------------------------------LEGAKEKLAEHY 264
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A ++L LP L + + + R N
Sbjct: 265 QHAINALDQLPI--DVSLLRDFAAYIVHRKN 293
>gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402]
Length = 344
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 8/297 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + V+ L+ GGKR RP+L + + + E + L IEF HTA+L+HDD+ D S
Sbjct: 47 IINPVRDLVKRGGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIEDKSD 106
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-------QEALEALSLVACTLAE 142
RRG AA + +G T++ +L +A +I ++ +L + +L L +
Sbjct: 107 TRRGAPAAHIKYGLDTALNSASWLYFEALNPLINYEASESVRAEIYSLYSQNLRRLHLGQ 166
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ ++ + ++Y+ +I KT L A E+ + AG + ++G
Sbjct: 167 SMDIGWHSNPDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMG 226
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
I FQ++DDV + + L + I
Sbjct: 227 IGFQILDDVKNITEGNAGKRRGDDIVEGKKSLPLIFYTEENPEGAEKIKLLFKQAAKEGI 286
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCL 318
++ + + ++A+ E + + L + K+ + ++ + L
Sbjct: 287 ESPAVEASISAICSSKAVKRAEDYGKKIVEASLIKLQNNYKQNEAKELIFDLFNTIL 343
>gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida albicans WO-1]
Length = 507
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ + + +G NLG+ FQ+VDD+LDY +GK D + G T P++ A+++
Sbjct: 376 AQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQE 435
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K I +++ A + + + T+ A Y +A +LR LP+S
Sbjct: 436 PKLGD-----LIARKFNQPGDVEIARRAVEKYDGVAQTKEMATMYCHQALKNLRVLPESE 490
Query: 306 WKKSLMEVVDFCLQRLN 322
+ +L + + L R N
Sbjct: 491 ARSALELLTNSVLTRTN 507
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 52 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLILSKALSKIP 107
>gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
Length = 510
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ + + +G NLG+ FQ+VDD+LDY +GK D + G T P++ A+++
Sbjct: 379 AQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQE 438
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
K I +++ A + + + T+ A Y +A +LR LP+S
Sbjct: 439 PKLGD-----LIARKFNQPGDVEIARRAVEKYDGVAQTKEMATMYCHQALKNLRVLPESE 493
Query: 306 WKKSLMEVVDFCLQRLN 322
+ +L + + L R N
Sbjct: 494 ARSALELLTNSVLTRTN 510
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 52 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLILSKALSKIP 107
>gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52]
Length = 307
Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKTIQNKIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++G+ +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGDFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAKTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A +Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQAYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688]
gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688]
Length = 295
Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 121/325 (37%), Gaps = 51/325 (15%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
ME+V IL + ++Y + GGKR+R +L A +
Sbjct: 10 IQTRMERVLDDILPAANIIPSRLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVEQS 69
Query: 68 ACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------- 118
A A+E IH +L+H +DD LRRGK + + + T++LVGD L + AF
Sbjct: 70 AAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQALAFKVLAEPG 129
Query: 119 --CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ A++ + +A G+ L+ E I A++ +AA
Sbjct: 130 LLRDAARQMHMVHILAVASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIRAAA 189
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + V +A+ Y +G+AFQ+VDD+LD + +GK G+D + KPT
Sbjct: 190 LLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGKTAGKDADSNKPTY 249
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
IL L + A +A
Sbjct: 250 VTIL--------------------------------------GLERAKQLAQELYDEALA 271
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L DS+ + L ++ F QR
Sbjct: 272 PLAAYGDSAIR--LQQLAKFITQRS 294
>gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
Length = 365
Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/354 (20%), Positives = 123/354 (34%), Gaps = 34/354 (9%)
Query: 2 KMLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L +++ +L+ + D + D + + SGGKRLRP
Sbjct: 13 SDLRRAVSDVLDEFLRDQASVLREVSEDCAPVLDAIS-ALLSGGKRLRPAFCYWGFHGTG 71
Query: 59 Y--RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------- 105
+ V A ++E A L+HDDV+DDS RRG+ AA +
Sbjct: 72 GELPDEGIVTAAASLELFQAAALIHDDVMDDSDTRRGQPAAHRRFEALHARSGWDGSRER 131
Query: 106 ------------SVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQLSLS 151
+ D L S+A + + + + L Q S
Sbjct: 132 FGLAGAVLAGDLCLGWSDELFSRARLAPDALDRGRRIFNVMRTQLMGGQYLDMLEQASSD 191
Query: 152 KNLDVTEEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ D + L + +AG + +G+ LG AFQL D
Sbjct: 192 QRGTDGAVDRARRVVTFKSAKYSIEHPLLLGGSLAGASTDLLADYSRFGLALGEAFQLRD 251
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
DVL G+ E GK G+D R GK T+ + LA Q + + + ++ E ++
Sbjct: 252 DVLGVFGDPAETGKPAGDDLREGKRTVLIGLAVQAADPTQAAEVRRLLGSPELDAEGVET 311
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQRLN 322
++ + AL E A +L + + +L E+V R +
Sbjct: 312 LRQVLVDTGALSGVEKIISEQVDVACATLDAADVTEPARAALHELVVAATSRRS 365
>gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
Length = 293
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 51/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L+ K + +N + K I S + + +KY + +GGKR+RP++ L T ML
Sbjct: 1 MKKLQ--MNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLN 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++
Sbjct: 59 KDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTK 118
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF +V + E +S++ + S+ + E + ++KT
Sbjct: 119 AFELVSNDTTIEDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKT 178
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + ++ + IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D
Sbjct: 179 GALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDI 238
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T ++ + A E + +
Sbjct: 239 VNHKSTY----------------------------------VSLLGKEGA----EEKLNN 260
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + L + D L ++VD R +
Sbjct: 261 HQYLAMNCLNQISDQYDTSELSDIVDLFYNRDH 293
>gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Gambia94/24]
Length = 307
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/326 (19%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LQAIQNKIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCTIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + + + +G++ G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLDKDAKMYADFGLHFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ +++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +D + + + + + S + E + + + Y + GGKR+RP+LT A ML
Sbjct: 1 MFKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F ++ A + L + C + + + E+ + KT
Sbjct: 121 FQLMTSNTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+A++E+ ++ N+ R AL Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L +++AY
Sbjct: 241 QHKSTYVSLL--------------------------------------GLEQAKHQAYLV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G +A D+L + S L ++D+ L+R N
Sbjct: 263 GSQAHDALNLV--SYDTTILSALIDYLLERTN 292
>gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044]
gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 299
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 116/324 (35%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+ N + + I + + + Y GGKRLRP L AT M A
Sbjct: 12 EQANEALRRFIAPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAA 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG + +G ++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMV 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L + G+ L + A++ +A
Sbjct: 132 DVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL Y N+G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 MGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L +A+ A+ S
Sbjct: 252 ----------------------------------ALL----GLEQARKKAHDLIADARRS 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + ++ +QR
Sbjct: 274 LDELAAQSLDTSALEALANYIIQR 297
>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 295
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 120/334 (35%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ T + V+ + + I S + + + + Y + GGKR+RP LT+A A +
Sbjct: 2 NIKQFTAEVRSAVDNRLNQLIESHIASSSLKEAMAYGVLLGGKRIRPYLTMAVAELCGAE 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + ACA+E IH +L+HDD+ LRRG + +G T+VL GD L + AF
Sbjct: 62 TNDALDAACAVELIHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLAGDALQTLAF 121
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI----------KSK 168
++ + + + + + I
Sbjct: 122 EVLSTNLETKLSSQRRIAMIQHLASASGAKGMCFGQALDLDATGRAIDELELEKIHRHKT 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ ++A + +G+A+Q+ DD+LD G MGK G D
Sbjct: 182 GALIRASAALGVLAGNDESQQYLDHFCDFASWIGLAYQVYDDILDVVGNTEVMGKPQGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ K T ++ L +
Sbjct: 242 EAHHKATY----------------------------------VALL----GLDGASEKLL 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S Q+A SL +P ++ K L + L+R +
Sbjct: 264 SLHQQALLSLNKIPYNTQK--LETFSEILLKRDH 295
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 58/325 (17%)
Query: 15 VNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V+ ++++ +D ++ + + Y + +GGKRLRP+L +A A + + +ACA+
Sbjct: 24 VSSALIEQFPADWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAV 83
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+H +DD RRGK+ V+G +VL GD LL+ AF +++ +
Sbjct: 84 EMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGRRHG 143
Query: 130 LEAL----------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + G + E+ + KTA L +L
Sbjct: 144 VSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEELEFIHLHKTADLIIFSLLA 203
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
I G S +AL+ +G +LG+AFQ+ DD+LD G+ ++MGK D K T P
Sbjct: 204 GGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQEKVTYPYF 263
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL- 298
+ + + + AK +
Sbjct: 264 I--------------------------------------GMDASLQQVEELTASAKKVIT 285
Query: 299 -RCLPDSSWKKSLMEVVDFCLQRLN 322
+PD L+E+ D+ ++R +
Sbjct: 286 ESGIPD---FSRLLEIADYLMKRDH 307
>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
Length = 308
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ ++ I + + + D ++Y GGKRLRP L + ++ + D+ +L A+E IH
Sbjct: 31 DAVLPDEI-ARPKRLMDAMRYSSLGGGKRLRPFLVVESSAVFGVPRDSALLAGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + T++L GD LL+ AF ++ + +
Sbjct: 90 CYSLIHDDLPAMDNSDLRRGRPTLHKTADDATAILAGDGLLTLAFDIITRDEVHQDPAVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L+ LA + + D D + + KT L +L+
Sbjct: 150 LLLTRALARAAGIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCISGALL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
QAL +YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 210 GQASQKDYQALDAYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R KA ++L
Sbjct: 267 -----------------------------------GIDGAKKRVRDLLAKADEALSAFG- 290
Query: 304 SSWK-KSLMEVVDFCLQRLN 322
+ L F R N
Sbjct: 291 --ARGDVLRAAAHFVADRKN 308
>gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 371
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/307 (23%), Positives = 118/307 (38%), Gaps = 23/307 (7%)
Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
+ + GK LR D + A ++EF+H L+ DDV+D+S +RRG+ A
Sbjct: 64 LLADGKCLRSTFLYVGWRCGADGTDAAIRAAASLEFLHAFALMQDDVMDESPMRRGRPTA 123
Query: 98 RLVWGNQT----------------SVLVGDFLLSQAFCMVIETKSQ-----EALEALSLV 136
+ N +VL+ D L A M+ E+ A +
Sbjct: 124 HRAFANWHHANGLSGSSTRFGESAAVLLADLCLVWAEQMLRESGVDAAALDRAWPRYDTM 183
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALK 195
LA G+ L + + L V + K+ LE+ + +AG AL
Sbjct: 184 RTELAVGQFADLVNDTATFPSLDAVLDVARRKSGNYTVRRPLEIGATLAGCDERQLSALA 243
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
YG +G AFQ+ DD+L G GK G+D K T V ++Q ++ +
Sbjct: 244 GYGSAVGEAFQMRDDLLGVFGSPETTGKPAGDDLAARKATSVVAASYQLANDTQRRRLGA 303
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVV 314
+ G ++ ++ ++ E A+ E A DSL D + +L +
Sbjct: 304 LMTGGHLTPADITHWQNLIAETGAVEWIEELIERRLTWALDSLDTADFDGEARDALATMA 363
Query: 315 DFCLQRL 321
C +R+
Sbjct: 364 AACTERV 370
>gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57]
Length = 307
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061]
gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus nematophila ATCC 19061]
Length = 315
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/326 (21%), Positives = 120/326 (36%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ VN ++ S + +++ GGKRLRP L + M + A
Sbjct: 28 QHVNDKLMTVFSSLPFLDSPLGTAMQHGAVLGGKRLRPFLVYSVGEMFGLSRKSLDAAAL 87
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L S AF ++
Sbjct: 88 ALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESQAILAGDALQSLAFELLAHYDMP 147
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L + G+ L A++ +AA
Sbjct: 148 DVALSDRLAMVAELASASGFAGMCGGQSLDLEAEGKQIDLASLEQIHRHKTGALIRAAAR 207
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ V L Y +G+AFQ+ DD+LD G +GK G D + GK T P
Sbjct: 208 LGAYSAGQRGREVIPLLDQYTQAIGLAFQVHDDILDVIGNTEIIGKRQGNDQQIGKNTYP 267
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A ++A +
Sbjct: 268 ----------------------------------ALL----GLEQAQEKARELYEEAITA 289
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQRLN 322
L L S+ ++L ++ F ++R +
Sbjct: 290 LTELDKKSYNTRALKKLAGFIIERNS 315
>gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
subunit 1 [Hydra magnipapillata]
Length = 186
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ V + EL QL ++D YL KTA L + + + +L+A + V+
Sbjct: 1 MDNVPFHRSRRELMQLVSKDDIDQRFNHYLTKTFRKTASLMANSCKSVALLANCSSIVQD 60
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
YG NLG+AFQLVDD LD +GK G D G T PV+ A Q+
Sbjct: 61 MAFEYGKNLGMAFQLVDDALDIISSSETLGKPAGVDMSLGLATAPVLFAAQKFPDLHAII 120
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ N VE+++KA + ++ + +T A Y +A S+ L DS K +L+
Sbjct: 121 GRRFKNK----VEDVQKALEYVNQSDGVSETFMLASKYAMEACKSISSLKDSEEKAALIT 176
Query: 313 VVDFCLQRL 321
+ +F ++R
Sbjct: 177 LANFVVERK 185
>gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
Length = 295
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/335 (22%), Positives = 131/335 (39%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ E + ++V + + + ++Y GKRLRP LT+ ++
Sbjct: 1 MENFEQRLNEHADRVTVALDALLPRAEGPEAHLNSAMRYAALGPGKRLRPFLTIEAGHLV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ACA+E IH +L+H +DD +RRG+ + T+VL GD L S
Sbjct: 61 HADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGDGLQS 120
Query: 116 QAFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
A+ ++ + + + + G ++ + +
Sbjct: 121 IAYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTRMHRM 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L S A+E ++++ V + VR+AL+ + +LG+A+Q+ DD+LD G+ +E GK +G+
Sbjct: 181 KTGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGDEDEAGKAVGK 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T IL + R+
Sbjct: 241 DAGQGKATFVTIL--------------------------------------GIEGARDRS 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK+ L + L E VDF L R +
Sbjct: 263 RHLAAQAKEHLDPF--GARADVLREAVDFILARRS 295
>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
Length = 297
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK + + + + K + S E I + ++Y I +GGKRLRP L T +L
Sbjct: 1 MKDFQVYLKEKTDFFETELKKELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 EDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + + I
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+KAK + D K L+ + DF R
Sbjct: 263 NDTVEKAKQIIKDKFGDEKGK-ILISLADFIKDR 295
>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 301
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/338 (21%), Positives = 128/338 (37%), Gaps = 58/338 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
L+ ++ + + S E + + +++ +GGKRLRP+L + A
Sbjct: 4 DLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVMDAA 63
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ D V CA+E IH +L+H +DD LRRG+ + + T++L GD
Sbjct: 64 GLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILAGDA 123
Query: 113 LLSQAFCMVIETKSQEALEALSLVACT--------LAEGELRQLSLSKNLDVTEEDYLHV 164
LL+ AF ++ + + G S++ D +E + H+
Sbjct: 124 LLTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEIRHL 183
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT L A +++ ++ + L +G +G+AFQL DD+LD MGK
Sbjct: 184 QSMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVEASPEAMGKA 243
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D GK TL ++ + T
Sbjct: 244 TGKDAEAGKATLVGLM--------------------------------------GIDRTR 265
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A D + P S +L + D+ + R N
Sbjct: 266 AELQALLEEAHDLMA--PYGSKAAALNALADYVVTRSN 301
>gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
Length = 308
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 52/310 (16%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+ + + + ++Y GGKRLRP L + +A + +L+ A+E IH +L+HDD+
Sbjct: 39 ARPKRLMEAIRYSTLGGGKRLRPFLVVESAAVFGVPRAAALLVGAALECIHCYSLIHDDL 98
Query: 85 VDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
LRRG+ + + T++L GD LL+ AF ++ + + L+ LA
Sbjct: 99 PSMDNSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIISRDEIHPDAKVRLLLTRALAR 158
Query: 143 GELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + D D + + KT L +L+ Q
Sbjct: 159 ASGIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQ 218
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 219 ALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL------------ 266
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + R +A ++L D + L +
Sbjct: 267 --------------------------GIDGAKRRVRDLLARADEALSIFGDKG--QVLRD 298
Query: 313 VVDFCLQRLN 322
F +R N
Sbjct: 299 AARFVAERKN 308
>gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10]
gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua]
gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F]
gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125]
gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola]
gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1]
gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92]
gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A]
gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003]
gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10]
gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516]
gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua]
gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92]
gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F]
gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125]
gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola]
gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A]
gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004]
gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038]
gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003]
gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 306
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPLPFGNSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDALQTLA 128
Query: 118 FCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ E + + L + G+ L + +
Sbjct: 129 FSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + +L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGAQAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAQTKA 270
Query: 288 YSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
Q+A ++L L S SL + F ++R N
Sbjct: 271 MDLYQEALEALDELAKQSYNTDSLQALARFIIERNN 306
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ + + + S+ E + ++Y + GGKR+RP+L AT +
Sbjct: 7 ENFNAWLQSVQSAIEKSLSDLLPSEKQFPEPLHQAMRYAVLDGGKRIRPLLVFATGALFG 66
Query: 59 YRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
A A+E IH +L+HDD +D+ LRRGK + +G ++L GD L +Q
Sbjct: 67 APVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQ 126
Query: 117 AFCMVIETKSQEALEALSLVACT-------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ + L A L + + G+ L ++
Sbjct: 127 AFIVLSKIDDDAKLVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLKTG 186
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A+L ++ + + AL +Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 187 ALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTAILGKTAGKDA 246
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ KPT +L L + E A
Sbjct: 247 SDHKPTYVSLL--------------------------------------GLENAEKLAEK 268
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A +++ + L E+ D + R
Sbjct: 269 LRCQAHEAIEAFGKKAV--YLHELADLVVYRK 298
>gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf.
saccharolyticum K10]
Length = 298
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ L+ + ++ + + + I + + Y + +GGKRLRP+L +
Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+G AIE IHT++L+HDD +D+ RRGK + +G +VL GD LL A
Sbjct: 62 QGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA 121
Query: 118 FCM------------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ + G N V E +
Sbjct: 122 VETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKLDFIY 181
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +
Sbjct: 182 RLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPV 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T + L +
Sbjct: 242 GSDEKNHKTTYVTLE--------------------------------------GLENARA 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ +A L LP + + L ++ + R
Sbjct: 264 KSERLSDEAVRLLHSLPGKN--EFLEGLIRLLIYR 296
>gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
3043]
gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
3043]
Length = 285
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/317 (21%), Positives = 115/317 (36%), Gaps = 47/317 (14%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E+V I++R + ++Y + GGKRLRP+L A L A A+E
Sbjct: 9 EQVLAGIVERAAPVSGELDAAMRYSVLGGGKRLRPILVYAAGHALGAEDKALDAPAAAVE 68
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-----MVIETK 125
IH +L+H +DD +RRG+ + ++L GD L + AF
Sbjct: 69 LIHAYSLVHDDLPAMDDDDMRRGRPTVHRAYSEAMAILAGDALQTLAFEVLAETRHPRLG 128
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ A + +A G+ LS + A++ +A + A
Sbjct: 129 AMVRALANASGREGMAAGQALDLSAVGGRLDVDALATMHGYKTGALIRAAVRLGALAAAD 188
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ AL +Y +G+AFQ+ DD+LD G+ +GK G D KPT P
Sbjct: 189 EDDPRVAALDTYAAAIGLAFQIQDDILDVAGDAATLGKATGADAARAKPTYP-------- 240
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ L +A +A +L L + +
Sbjct: 241 --------------------------ALL----GLDGARAKARGLLDEALSALAPLGERA 270
Query: 306 WKKSLMEVVDFCLQRLN 322
+ L E+ + R +
Sbjct: 271 Y--PLAELARHMIDRDH 285
>gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 297
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 50/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++ ++ L +V + + + + + Y + +GGKRLRP+L L+ A +
Sbjct: 4 VEKMKALLKSRGREVETYLSACLDGRPMPPRLKESMLYSLQAGGKRLRPVLCLSCAALCG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A AIE IHT +L+H +DD LRRGK + + T++L GD LL+
Sbjct: 64 LEPQKALPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLLTD 123
Query: 117 AFCMVIETKSQEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ ++ + G+ + + V+ E+ + KT
Sbjct: 124 AFVIMCRAPVPPDRLLRAVAELALAAGASGMVGGQEWDMIYTGRSQVSLEELRGMHAMKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ L+AGV + +A+ ++G +LG+AFQ+ DD+LD + +GK G D
Sbjct: 184 GALLRASCVCGGLLAGVDDKALRAISNFGSSLGVAFQIADDILDVVADTATLGKPAGSDA 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK T P ++ ++ + + +
Sbjct: 244 EQGKNTYPSLVGLEKSRELARAQADAAQAALAGFA------------------------- 278
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + D+ + R
Sbjct: 279 --------------GPEADFLRALADYTVNR 295
>gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2]
gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2]
Length = 280
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 113/320 (35%), Gaps = 49/320 (15%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M + + + + + + ++Y + +GGKR+RP L LA + +A A
Sbjct: 1 MSDFESYLSHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAA 60
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+HDD+ LRRG + +G ++L GD LL+QAF +
Sbjct: 61 IEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACTCRA 120
Query: 129 ALEALS------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + + L VI + V +
Sbjct: 121 EVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAA 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ + G + G++FQ+ DD+LD V E+GKNI D N K T ++
Sbjct: 181 LLAGHREDAAVWERIGADTGLSFQIQDDILDVTSTVEELGKNINSDAENEKTTYVTLM-- 238
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ A Y ++A L LP
Sbjct: 239 ------------------------------------GVEAAREEADRYYRRALAQLDALP 262
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ + E+ D ++R N
Sbjct: 263 LDAA--PVRELFDQLMKRKN 280
>gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
Length = 290
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L++L E+++ + +++ SD+ + ++Y + +GGKRLRP LTL T +
Sbjct: 1 MLELKEL----KEQIDQFLEQQMPSDIDQPTLASSMEYSVNAGGKRLRPALTLTTVQIFG 56
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ N + + AIE +HT +L+HDD+ +D+ LRRGK +G + L GD LL+
Sbjct: 57 GQLNQNVMKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLT 116
Query: 116 QAFCMVIETKSQEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF + + + +A + ++ ++T E ++ + KT
Sbjct: 117 MAFQWLTDNQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLHRQKT 176
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+ +I ++ + L +G G+AFQ+ DD++D G +MGK + +D
Sbjct: 177 GDLLSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVGTAKQMGKAVHKDA 236
Query: 230 RNGKPTLP 237
K T P
Sbjct: 237 SEHKNTYP 244
>gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
TrichSKD4]
gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
TrichSKD4]
Length = 310
Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/340 (20%), Positives = 129/340 (37%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS--------DVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L+ KV + + + + E + +++ +GGKR+RP+L L
Sbjct: 11 MSDLKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLE 70
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
T + + + +ACA+EFIH +L+H +DD LRRG+ + + T++L G
Sbjct: 71 TVRLFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAG 130
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--------KNLDVTEEDYL 162
D LL+ AF +V + + LA+ ++ D +E +
Sbjct: 131 DALLTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIR 190
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT L ++ + + + + +G +G+AFQL DD+LD ++G
Sbjct: 191 KLQSMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVEASPEQLG 250
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK TL +L +
Sbjct: 251 KASGKDADAGKATLVGVL--------------------------------------GIEQ 272
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
T+ + +KA+ L L + + ++R N
Sbjct: 273 TKAELAALLEKAETVLAPF--GERAGILKSLAAYIVEREN 310
>gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
CD36]
gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
CD36]
Length = 498
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G NLG+ FQ+VDD+LDY +GK D + G T P++ A+++ K +
Sbjct: 374 NCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGE-- 431
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
I +++ A + + + T+ A Y +A +LR LP+S + +L
Sbjct: 432 ---LIARKFNQPGDVEIARRAVEKYNGVAQTKEMATMYCHQALKNLRVLPESEARSALEL 488
Query: 313 VVDFCLQRLN 322
+ + L R N
Sbjct: 489 LTNSVLTRTN 498
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 52 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLILSKALS 104
>gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine
bacterium 66A03]
Length = 338
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 106/312 (33%), Gaps = 15/312 (4%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
N + S+ + + S GK+LR + L+ + A A+E +
Sbjct: 28 FNQFFNSILPSNKHPLSAAATHHFSSKGKQLRAKIALSAGEKFGADDAACLHWASAVELL 87
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-L 133
H A+L+HDD+ D +RR + +G ++ +GD+++++AF + +
Sbjct: 88 HNASLIHDDICDGDTIRRNNASVWAKYGRDIALALGDWMIAEAFQQAAKAAHVSNSFNLV 147
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ ++ + Q N + D I + A ++ + +
Sbjct: 148 TKLSNHVKSTIAGQALEFDNALYPDIDKYLEISAGKTAPLFVAAIEGIAEIAGRSELIEE 207
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ Y + +GI +Q +D+ + G + R + F + +R
Sbjct: 208 INHYFVTMGICYQFANDIQNILGTDGAASPSSDLKRRAPNAVIVYFRNFLKSPERSLFDS 267
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA--------KDSLRCLPDSS 305
+ + E+ A+ + Y ++A K+ + +
Sbjct: 268 WLAGKSQNKA----NYWQKKITESDAINEVAKEMYKLLKRAEGVSGTLPKECIGVIA--P 321
Query: 306 WKKSLMEVVDFC 317
+K L V +
Sbjct: 322 IQKQLRNVCEQI 333
>gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16]
Length = 307
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + + + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLSKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
Length = 298
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 51/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L+ K + +N + K I S + + +KY + +GGKR+RP++ L T ML
Sbjct: 6 MKKLQ--MNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLN 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++
Sbjct: 64 KDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTK 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF +V + E +S++ + S+ + E + ++KT
Sbjct: 124 AFELVSNDTTIEDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + ++ + IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D
Sbjct: 184 GALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDI 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T ++ + A E + +
Sbjct: 244 VNHKSTY----------------------------------VSLLGKEGA----EEKLNN 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + L + D L ++VD R +
Sbjct: 266 HQYLAMNCLNQISDQYDTSELSDIVDLFYNRDH 298
>gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana)
tropicalis]
gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis]
gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ A+ + L G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFTQQLLELHRGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E + + + +S + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQL---FSSYDKDLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +V+ K
Sbjct: 188 DDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T+ +A + L + SL+E
Sbjct: 246 YCVHYLEKVGSFEYTKETLRELEAEAYKHIESLGGNPQLASLIE 289
>gi|319745656|gb|EFV97955.1| trans-hexaprenyltranstransferase [Streptococcus agalactiae ATCC
13813]
Length = 226
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + GEL Q+ L N YL I KTA LF A + +
Sbjct: 31 MADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYF 90
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + V + G N+G+ FQ++DD+LDY + K + ED G LP++LA +
Sbjct: 91 GGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGVYGLPLLLAIE 150
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ F ++ E+++K ++ +R + + A + +KA + LP
Sbjct: 151 ---ENPDIFKPILDKKTDMTTEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQ 207
Query: 304 SSWKKSLMEVVDFCLQRL 321
SS KK L+++ ++ L+R
Sbjct: 208 SSPKKQLLQLTNYLLKRK 225
>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
Length = 291
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/316 (21%), Positives = 130/316 (41%), Gaps = 49/316 (15%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V + + + +++ +++ + +GGKRLR L + + + E + D + A AIE
Sbjct: 15 VEIALKEMLQKQGNDLMSAPIRHAVLNGGKRLRAFLVIHSCNIFEVQKDTAIQAAIAIEC 74
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +DD LRRGK + W T+ L GD L + AF ++ + +A+
Sbjct: 75 LHAYSLVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDALQALAFELIASLPNTDAIR 134
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEED------YLHVIKSKTAVLFSAALEVSSLIAG 185
+ L+ ++ + L + D+ E + + + + A
Sbjct: 135 IVELLKKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDITSLQQNKTGALIEWSAISGAI 194
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ N + L Y ++G+AFQ+ DD+LD G+ GK + +D GK T +L
Sbjct: 195 LSNHDDRKLLDYAKSIGLAFQIQDDILDIEGDAVLAGKRLQKDVSAGKATFVSLL----- 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + RA ++A D+L D +
Sbjct: 250 ---------------------------------GIENAKLRAKELIEEAIDALSDYGDKA 276
Query: 306 WKKSLMEVVDFCLQRL 321
+ + +V F ++R
Sbjct: 277 --EPMRQVAKFIIERK 290
>gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30]
Length = 307
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S++ K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDELFSNI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIKK----ENNLILEKLAQDVIYRT 306
>gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
23877]
Length = 352
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/344 (19%), Positives = 121/344 (35%), Gaps = 34/344 (9%)
Query: 4 LEDLTLKD---MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
L ++ + V+ + E + + GKRLR
Sbjct: 18 LRSYVDEEAGHLVAVD----DALAPVAEQLRGAAGH-----GKRLRAAFCYWGWRAAGQP 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR--------------------L 99
D V A A+E +H A ++HDD++DDS LR G A
Sbjct: 69 DDDALVRAAAAMELVHAAAIVHDDLIDDSPLRHGLPTAHVALEAVLARDGRRRPRAAARS 128
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
+ L+ A + A + +A L GE ++ + T
Sbjct: 129 LAMLVGDHLMALAGQLFAGSGLPAAYLARARGLWAELARELVAGECLEILHTGGRPDTGT 188
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
V L + L+AG +R+A +YG+ LG AFQL DD+L G+
Sbjct: 189 SLKVVRYKTAKYTVEHPLLIGGLLAGAGPGLREAYSAYGLPLGEAFQLRDDLLGLFGDPE 248
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK +D R +PT + ++ ++ + + + +L++ +MRE +A
Sbjct: 249 RTGKAGLDDLRTHRPTALLAETWEAADASQRERLRGVLGRSDLDETHLREVRALMRELKA 308
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRLN 322
E + ++A +L ++ L + R++
Sbjct: 309 PQRVERMIGARVERATRALDSADTPPHARRVLYALAQQATDRIH 352
>gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001]
gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001]
Length = 312
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/334 (20%), Positives = 127/334 (38%), Gaps = 57/334 (17%)
Query: 6 DLTLKDMEK----VNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L +DM + I + + + ++Y GGKRLR L + TA +
Sbjct: 19 ALLKQDMGARARVIEHTIDTLLPLTTGGDARLIEAMRYATLGGGKRLRGYLAIVTASLFG 78
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A ++E +H +L+H +DD +RRG+ + + T++L GD L ++
Sbjct: 79 VPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDALQTK 138
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--------EDYLHVIKSK 168
AF ++ +++ + AE + + E + H+ K
Sbjct: 139 AFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLHALK 198
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + E +++ ++R+ L+SYG N+G AFQ+ DDVLD E+GK G+D
Sbjct: 199 TGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDATATAEELGKTAGKD 258
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+GK T ++ + A
Sbjct: 259 EASGKSTF----------------------------------VALL----GIEGARAEAL 280
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A +L + L ++ + ++R N
Sbjct: 281 RVTEEAIANLEPF--GAQADRLRDLAYYVIERKN 312
>gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C]
Length = 300
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/340 (20%), Positives = 132/340 (38%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K + V + + EM+ + +++ + +GGKRLRP L +
Sbjct: 1 MHEFTTLLAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + + A+E IH +L+HDD+ D+ LRRG+ + + T++L G
Sbjct: 61 SAALFDIPPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYL 162
+ LL+ AF ++ + + + L + + E
Sbjct: 121 NALLTFAFEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATT 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L A + +++ ++ L S+G ++G+AFQL DD+LD +G
Sbjct: 181 TLQQMKTAALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLDLTSHTKILG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K TL + +L +
Sbjct: 241 KTAGKDQIANKATLINLY--------------------------------------SLDE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + KA++ L LP + L + F R N
Sbjct: 263 VKKKRDELITKAEEFL--LPFGAKAIPLKQAAHFIATRKN 300
>gi|284053405|ref|ZP_06383615.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 116
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+VDD+LD+ G +GK D ++G T P + A EK F ++ I+
Sbjct: 4 FQIVDDILDFTGSTESLGKPAASDLKSGNLTAPTLFAL-----AEKPFLETLIDREFAQD 58
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L++A +++E+ + + A + Q A + + LP S +++L+E+ D+ + R+
Sbjct: 59 GDLEQAIALIQESSGIDKSRELAIHHAQVAVEHINQLPPSESRQALVELGDYVVSRI 115
>gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491]
gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
Length = 306
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 150/312 (48%), Gaps = 14/312 (4%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ ++N I + + ++ + + + GK LR L L A D +LL
Sbjct: 4 LAQINQKIQDFLEELESPIVLGLSQKIQS--GKMLRSKLALNIA----GESDECILLCAI 57
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE I A+LLHDDV+D++ RR + + + G++ ++++GD L S+AFC + + + +
Sbjct: 58 IEMIQNASLLHDDVIDNATTRRSQPSINAIAGDKNAIMLGDVLYSKAFCELSDFQESFPM 117
Query: 131 EALSLVACTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ A GE+ + L+K + E YL +I+ KTA L + ++ +AG
Sbjct: 118 IPRIVSNAVTLLAIGEMEDVELAKQFNANEAKYLKMIEHKTASLIESTAYAAAFLAGRNQ 177
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + YG NLGIAFQ++DDVLD +GK I DF+ GK TLP I +
Sbjct: 178 EEAKDFRVYGRNLGIAFQIIDDVLDITANEKMLGKPILSDFKEGKVTLPYIYLYHSLNGL 237
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
EK ++ ++S E + ++E+ A+ + A G+ +++
Sbjct: 238 EKKRLENAFKK-ELSKEEQEWILQNLKESGAIQKSIDLAKHLGRVGIEAISNY----SCD 292
Query: 309 SLMEVVDFCLQR 320
L+++++ + R
Sbjct: 293 KLVKIMEEMINR 304
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
Length = 297
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 18/292 (6%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M L E + V + + E + + Y + +GGKR+RP+L LAT
Sbjct: 1 MAQLSVEQFLNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLL 114
L + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL
Sbjct: 61 LGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVI 165
+ AF ++ E + L + E + ++
Sbjct: 121 TYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT + ++ +L+ G + L + +LG+AFQ+ DD+LD G ++GK +
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTK---REKNFWKSTINDGKISVENLKKAFIIM 274
G D N K T PV+L+ + + K + KI L ++
Sbjct: 241 GSDRDNKKATYPVLLSLGGAKEKLAFHIDAAKRHLQQAKIDDAVLAYICELV 292
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ + K I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLTVFLEHYKKVIDESLFKEISVRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK ++G+ T++L GD LL+
Sbjct: 61 ADPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLA------EGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF ++ E ++ L+L+ +Q + + L I ++
Sbjct: 121 AFSILAEDENLSFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKT 180
Query: 171 V-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HMSIAKSALSGHDFDD----EILLQLADLIALREN 293
>gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 280
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ LE +++ +I + + + + + V +++ +GGKR+RP +T+ +
Sbjct: 1 MEYLERRVALAEDRLEAVIDE---VEPDELSEEVGHVVLAGGKRVRPAVTILACEAFDGD 57
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D V A IEF+H A+L+ DD++D S +RRG +A +G +++ D LL +AF +
Sbjct: 58 PDAAVDFAAGIEFVHNASLVIDDIIDRSEVRRGTPSAWAEYGYGPAIIASDGLLGEAFAL 117
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A+ VA L E + + TE +Y+ + + KT LF AA E+
Sbjct: 118 FS-----ADPRAMRTVAEALVELGEGEATELAARPTTEAEYMELARRKTGALFRAAAELG 172
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ G + + Y +G+AFQ+ DDVLD + +++GK G+D +P++ +
Sbjct: 173 AIAGGADSHAVDSFGEYAERVGVAFQMRDDVLDATADADDLGKPTGQDAEMDRPSVLQVT 232
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ +S E + + RA +E +
Sbjct: 233 S--------------------LSPEEIDE--------RAREQSELALAALDD------AD 258
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
P++ + L ++ +F + R
Sbjct: 259 PPETEAIEYLRDLAEFVVVR 278
>gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11]
gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11]
Length = 294
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 48/316 (15%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + R+ + + ++Y I +GGK LR L L +A + D + A AIE
Sbjct: 21 SRITAHMEARLGGNDP-LHAAMRYAI-TGGKMLRGFLVLESARLHGVDDDAALEAALAIE 78
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----MVIETKS 126
IH +L+H +DD LRRG+ W +VL GD L + AF I +
Sbjct: 79 CIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDSLQTFAFELLADPKIGPHA 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L+ + + L ++ T D + + + ++ A +
Sbjct: 139 LVLIRGLAQSSGKDGMVSGQMLDIAAETATTPLDLDQITRLQNRKTGCLISWSATAGAVM 198
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L+ Y LG+AFQ+ DD+LD G+ ++GK + +D GK T +L
Sbjct: 199 AGADEAPLRRYADALGLAFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLL------ 252
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
L + RA + ++A D+L P S
Sbjct: 253 --------------------------------GLDAAKDRARTLMEQACDALS--PYGSA 278
Query: 307 KKSLMEVVDFCLQRLN 322
++L E F + R +
Sbjct: 279 AETLKEAARFVISRDS 294
>gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
Length = 295
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/319 (23%), Positives = 120/319 (37%), Gaps = 50/319 (15%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E V +L + + + ++Y GGKRLRPML LA A + A+E
Sbjct: 16 EAVLQQMLPETALAPQGLHEAMRYAALDGGKRLRPMLVLAAAELGNRVQAACEAALAAVE 75
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+HDD+ + LRRGK + +G T++LVGD L + AF ++ A
Sbjct: 76 CIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLVGDALQTLAFELLSRQTDLPAA 135
Query: 131 EALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L ++ +A G+ L+ + + A++ +A +
Sbjct: 136 RQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDALEQMHSLKTGALIRAAVQLGALS 195
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
V + AL Y LG+AFQ++DDVLD + +GK G+D KPT +L
Sbjct: 196 CPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAADTTTLGKTAGKDADADKPTYVKLL-- 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L A A ++L
Sbjct: 254 ------------------------------------GLDAARGYAEQLAADAINALATFD 277
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ + L E+ +F + R
Sbjct: 278 ARATR--LRELAEFTVGRK 294
>gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
ATCC 35098]
gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
ATCC 35098]
Length = 330
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
Query: 5 EDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
E+L + +++ I + + + D++K + S GK +R L + +LM E
Sbjct: 12 ENLIEDLVIEIHQEIKNILGDYKSSQNLYDIIKDALRSSGKMIRTKLLICISLMGEEEIS 71
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D + A+E H A+L+HDD++DDS LRR + + +G +V GD+++++ F +
Sbjct: 72 DKIISQCAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSYL 131
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ E + ++ + GE+ Q ++V+ ++Y I KTA F S
Sbjct: 132 AKKGYVEEISVIADTIRDMCNGEVGQNLNKYKINVSTDEYFENISGKTASFFKTVCYFGS 191
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-L 240
G + + +G NLG+ FQL DD+LD E GK D R G T P+I
Sbjct: 192 KNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLDLFSEKALTGKEEFSDLREGIYTYPIILA 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + ++ ++++ RA + + + L+
Sbjct: 252 LQNEEYGKDIYDILVKNRQTSLDKKDFLILRDLLKKARADFLSSMMIKKLADENRFILKS 311
Query: 301 LPDSSWKKSLMEVVDFC 317
L DS L ++++
Sbjct: 312 L-DSGRSTYLYKILEKV 327
>gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
humanus corporis]
gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
humanus corporis]
Length = 262
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +A E IH+A+L+HDDV+D S RRGK + ++W ++ + GDF+L+ A M
Sbjct: 6 TPSQRDVAMIAEMIHSASLIHDDVIDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMM 65
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + LS V L +GE QL + + YL KTA L + + +
Sbjct: 66 IARLRDDKVTLTLSQVVTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSAKAV 125
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG S+ + YG N+G+AFQLVDD+LD+ + MGK D + G T PV+
Sbjct: 126 AMLAGADESLSEVAFQYGRNIGLAFQLVDDLLDFVSSADAMGKPTAADLKLGLATAPVLF 185
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A ++ + ++ KAF ++ +++ L T + A + +A
Sbjct: 186 ACEKYPELNAMIM-----RRFQEPGDVDKAFELVHKSQGLEQTRFLAKKHCMEAVRLANT 240
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ +S ++K L+ V DF L R+
Sbjct: 241 IVESPYQKGLIVVSDFVLNRM 261
>gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
Length = 300
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/340 (20%), Positives = 124/340 (36%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--------EMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K + V + + + V E++ ++Y + +GGK LRP +
Sbjct: 1 MHEFTTLLAKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + + A+E IH +L+HDD+ LRRGK + T++L G
Sbjct: 61 SAALFDVPPEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYL 162
+ LL+ AF ++ + + G ++ L
Sbjct: 121 NALLTFAFEIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKIL 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KTA L S + + +++ S+ Q +G +G+AFQL DD+LD +G
Sbjct: 181 TLQRMKTAALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLDVTSSTEILG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K TL I + +
Sbjct: 241 KTAGKDKAANKATLVNI--------------------------------------DGIAE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
T+ + + A L D + +L + F R +
Sbjct: 263 TQKKRDTLIHDAVKLLNPFGDKAL--ALQQAAHFIAIRRH 300
>gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine
bacterium HF10_25F10]
Length = 341
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/313 (18%), Positives = 115/313 (36%), Gaps = 11/313 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E ++ IL+R+ + + + D + + GK LR + L A +L+ + A AIE
Sbjct: 27 EIIHDFILERMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAALHWAAAIE 86
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALE 131
+H A+L+HDD+ D LRRG+ A +G ++ +GD+L++ +F + +
Sbjct: 87 VLHNASLVHDDICDGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAAEAAQRAQTPM 146
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L ++A + + + VT+ D+ A +
Sbjct: 147 LLKILATHMKTTTVGEAHEFDPAPVTDWDHYLQGAGDKTAPLLTAPLEGIAAMALHGGAA 206
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ + +LG A+Q+ +D+L++ G R + + +
Sbjct: 207 PTIGACFRSLGNAYQIGNDILNFSGSDGANTCGSDMARRAPNGVVVLFRQTLDADRLAAF 266
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD------SS 305
S + +R + AL + R + A LP +
Sbjct: 267 DSWYASG----SDDGFDAWLAELRRSPALFEAARRMNAMLDDATGLADTLPPEMAAVITP 322
Query: 306 WKKSLMEVVDFCL 318
++ L +V +
Sbjct: 323 IQQLLQQVCLKSV 335
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 50/305 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + ++Y GGKR+RP+L A + + ++ CA+E IH +L+HDD+
Sbjct: 32 PARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPC 91
Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--------LSLV 136
LRRG+ + + T++LVGD L + AF ++ E + +
Sbjct: 92 MDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLGEPKQQLEIIALLAHASG 151
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ +A G+ L+ E L A++ +A L + + R +L
Sbjct: 152 SRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERTSLDR 211
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+ G+ FQ+VDD+LD +GK G+D KPT
Sbjct: 212 FAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTY-------------------- 251
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
++ L A A+D+L + + + L ++ DF
Sbjct: 252 --------------VALL----GLDAARTYADELRADARDALSIFGERASR--LNQLADF 291
Query: 317 CLQRL 321
R
Sbjct: 292 ICHRQ 296
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +D + + + + + S + E + + + Y + GGKR+RP+LT A ML
Sbjct: 1 MFKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F ++ A + L + C + + + E+ + KT
Sbjct: 121 FQLMTSNTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+A++E+ ++ N+ R AL Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L +++AY
Sbjct: 241 QHKSTYVSLL--------------------------------------GLEQAKHQAYLV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G +A D+L + S L ++D+ L+R N
Sbjct: 263 GSQAHDALNLV--SYDTTILSALIDYLLERTN 292
>gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 304
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/339 (21%), Positives = 128/339 (37%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + + L+ + + E + D + Y + +GGKRLRP L + +
Sbjct: 6 DTFETRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + + A+E +H +L+H +DD LRRGK + + T++L GD
Sbjct: 66 AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF ++ ++ A + G ++ E +
Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E ++IA + R+ L+++G +G+AFQL DD+LD + MGK
Sbjct: 186 LQAMKTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSDAATMGK 245
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK T + R +
Sbjct: 246 ATGKDAARGKGT--------------------------------------LVALRGMEWA 267
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + + + A+ L P +L+ F R +
Sbjct: 268 EAQLREHVRDAEALLA--PYGPRASTLIAAAHFIADRKS 304
>gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
Length = 293
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 55/333 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + V+ +L I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLNLFLEHYKKVVDESLLTEINKRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALQ 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V +A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VDPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ + G + ++N VT + + KT
Sbjct: 121 AFSILAEDENLSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FMNKSTYPGLLT--------------------------------------LDGAKSALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
+ AK +L D + L+++ D R
Sbjct: 263 HVSIAKSALSGHGFDD----EILLKLADLIALR 291
>gi|9719409|gb|AAF97788.1| candidate tumor suppressor protein [Homo sapiens]
Length = 399
Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 119/346 (34%), Gaps = 40/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L + + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDXLSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IH A L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE- 159
+GN+ ++L GDFLL+ A + ++ + +E L+ L +G + S SK +T++
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 160 ---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ DV +
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIK 302
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G G++ + K ++
Sbjct: 303 EKTSDSMTFNLNSA-----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKA 354
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 355 GKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 399
>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 309
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/345 (20%), Positives = 129/345 (37%), Gaps = 63/345 (18%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI-CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + +L + + + + S++ I ++Y +F+GGKRLRP+L + M+
Sbjct: 5 LSSVIELLKSGAAATDAALERLLPGSEIAPHSIHRSMRYSVFAGGKRLRPILCMEAGRMV 64
Query: 58 EYRGDNHV-LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + L A+E +HT +L+H DD LRRGK + +V+G ++L GD L
Sbjct: 65 AGKLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQ 124
Query: 115 SQAFCMVIETKSQEALEALSLVAC-----------------TLAEGELRQLSLSKNLDVT 157
+ A+ + + G + T
Sbjct: 125 TFAYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPT 184
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + ++KT L + ++ + AG + L+ +G G+AFQ+VDDVLD
Sbjct: 185 AEQVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQS 244
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
++GK G+D + K T P +
Sbjct: 245 SEDLGKTAGKDTASDKVTWPAVF------------------------------------- 267
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +A + ++A L S SL V + ++R N
Sbjct: 268 -GIEASLAQADTLIEEAFAELESY--GSAADSLKSVARYLVERKN 309
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 116/336 (34%), Gaps = 55/336 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L L E+ N + + + + + +KY GGKR+RP LT T ML
Sbjct: 4 SSLLQLLQHYQERNNQQLTHWLDAQPFADQTLLKAMKYGALLGGKRVRPFLTYVTGNMLG 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+N A AIE IH +L+HDD+ LRRG+ + + T+VL GD L +
Sbjct: 64 VNEENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGDALQTL 123
Query: 117 AFCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF + + A + A + G+ L +
Sbjct: 124 AFEILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLEQIHKH 183
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
A++ A + + L +Y +G+AFQ+ DD+LD + +GK G
Sbjct: 184 KTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTETLGKPQG 243
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D K T P ++ L + +
Sbjct: 244 SDIALDKSTYP----------------------------------ALL----GLEGAQQK 265
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A Q+A +L +P L + ++R N
Sbjct: 266 AQQLYQEAVQALEAIPY--DTTQLEVFARYLIERKN 299
>gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
Length = 307
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LQAIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ + D +
Sbjct: 111 KAF----FELSKMGEAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKNAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+++ + L ++ + R
Sbjct: 285 EAI----EGENNLILEKLAQDVIYRT 306
>gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953]
gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+]
gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia
pseudotuberculosis IP 32953]
gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 306
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPLPFGNSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDALQTLA 128
Query: 118 FCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ E + + L + G+ L + +
Sbjct: 129 FSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + +L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAQTKA 270
Query: 288 YSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
Q+A ++L L S SL + F ++R N
Sbjct: 271 MDLYQEALEALDELAKQSYNTDSLQALARFIIERNN 306
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 130/336 (38%), Gaps = 57/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLE- 58
+ ++V + + + ++Y +F GGKR+RP+L LA A ++
Sbjct: 2 EIATYLNDQRQRVEDQLAALMLKPAGDFSQHIESMRYSLFVGGKRIRPILCLAGAEAVDS 61
Query: 59 --YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ +ACA+E IHT +L+H +DD LRRGK V+G ++L GD LL
Sbjct: 62 GEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILAGDGLL 121
Query: 115 SQAFCMVIETKSQEALEALSLVACTLA--------EGELRQLSLSKNLDVTEEDYLHVIK 166
+ AF ++ S + +A + + L + + L I
Sbjct: 122 TFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEMLRTIH 181
Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
L +A++ +++AG ALK+YG N+G+AFQ+VDD+LD ++GK
Sbjct: 182 RSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVEATTEQLGKPA 241
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D ++ K T P + +
Sbjct: 242 GSDLKSDKVTYPSLF--------------------------------------GKETSRT 263
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A Q+A +L D L + +F + R
Sbjct: 264 MAREAVQEAIAALAAF-DHQA-DPLRNLANFIVDRK 297
>gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 364
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/353 (20%), Positives = 126/353 (35%), Gaps = 43/353 (12%)
Query: 12 MEKVNFLILKRICSDVEMIP------DVVKYL---IFSGGKRLRPMLTLATALMLEY-RG 61
+E++ + + +++ D++ + GGKR+R
Sbjct: 11 LERLQETLDAEVSHQRDVLAPLGGQTDLMLDAVATLLRGGKRVRASFLYWGYRAAGGADS 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------------- 105
D V A ++E A LLHDDV+D S RRG AA
Sbjct: 71 DALVRCAASMELFQAAALLHDDVMDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGEAG 130
Query: 106 SVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
++L GD L+ A M + L+ L G+ + + T
Sbjct: 131 AILAGDLCLTWADEMYATSGLPADEVARGRAVFDLMRTQLMGGQFLDVLEASTPWATMGT 190
Query: 161 YLHVIKSKTAVLFSAALEVSSLI-------AGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
+ ++ + F +A AG V QAL YG+ LG A+QL DD+L
Sbjct: 191 PERIERALRVIRFKSAKYTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQLRDDLLG 250
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKKAF 271
G+ + GK G+D R GK T+ V + + + +++
Sbjct: 251 VFGDPAQTGKPAGDDLREGKRTVLVAHLLDAAGDEPEVGTFFAERFGHDDLREDEVERIR 310
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP---DSSWKKSLMEVVDFCLQRL 321
++ RE+ A+ E R Q+A+ +L + + +L ++ R
Sbjct: 311 VLARESGAVDAVEARIAEGAQRARAALDGVRSQVPADAYAALEAFIESTTART 363
>gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
Length = 504
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ + + +G NLG+ FQ+VDD+LDY GK D + G T P++ A+
Sbjct: 373 AQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDATFGKPSQADLKLGLATAPILFAW--- 429
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+++ I +++ A +++ + L T A Y A ++LR LP+S
Sbjct: 430 --KKEPQLGELIARKFNQPGDVEIARDAVQKYKGLEQTREMATKYCMSALENLRQLPESD 487
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L + + L R
Sbjct: 488 ARSALELLTNSVLTRT 503
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ +M + I I S + V Y + GK +RP++ L + L
Sbjct: 51 SIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFEAEGKNVRPLIVLILSKAL 102
>gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori B38]
gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori B38]
Length = 307
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LQAIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAISLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ D +
Sbjct: 111 KAF----FELSKMGEAIAQILSNAVLRLSRGEIEDVFVGGSFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 48/317 (15%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ +N +L + + + + Y + +GGKR+RP+L L T L + + A+
Sbjct: 13 LNLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIAL 72
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK+ + T++L GD LL+ AF ++ T+
Sbjct: 73 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILNTQLNAE 132
Query: 130 LEALSLV------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ + ++ +T + + KT L AA+ + +I
Sbjct: 133 IKLSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGII 192
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
++ + L G N+G+ FQ+ DD+LD G +GK +G D N K T +L
Sbjct: 193 MNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLL--- 249
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L ++ + D+L+ L
Sbjct: 250 -----------------------------------GLEASKQLLNDKLTETYDALKTLQ- 273
Query: 304 SSWKKSLMEVVDFCLQR 320
+L ++ + ++R
Sbjct: 274 -PINDNLKTLITYIVER 289
>gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 299
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + + Y GGKRLRP L AT M A A+E
Sbjct: 15 NDALRRFIAPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDTTLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS----------QAFCM 120
IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAEVS 134
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + A++ + G+ L E+ A++ +A +
Sbjct: 135 DRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGVQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L + +A ++A+ SL
Sbjct: 252 -------------------------------ALL----GLEQAQRKARDLIEEARQSLNE 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + D+ +QR
Sbjct: 277 LAAQSLDTSALEALADYIIQR 297
>gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
Length = 330
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 11/319 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + +L R+ + D+++ GGK LR +LT+ +AL + + A A+E
Sbjct: 10 QALQERLLARLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLEAATALE 69
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKS 126
L+HDD+ D S RRG+ A + ++ GD + ++ +
Sbjct: 70 LFQNWVLVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPP 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ LE +V T L L + + + A ++A +
Sbjct: 130 EVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLA 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ A + G+ LG AFQ+VDDVL+ G + G+ + + + + +
Sbjct: 190 GKTPPAAYEEGGLRLGTAFQIVDDVLNLEGGEAYGKERAGDLYEGKRTLILLRFLEEAPP 249
Query: 247 KREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR----CL 301
+ + E + + +RAL + A + L L
Sbjct: 250 EERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDL 309
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L ++ ++R
Sbjct: 310 PGKEALDHLRGLLAALVER 328
>gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301]
gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301]
Length = 304
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/331 (19%), Positives = 116/331 (35%), Gaps = 51/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ ++ ++ + S + + ++Y GGKR+R +L A + +
Sbjct: 12 LLDFSAWAAAKQARIEDVLNNALPSTNVAPQRLHSAMRYSALEGGKRVRALLCYAASELC 71
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ACA+E IH +L+H +DD LRRGK + + + T++LVGD L S
Sbjct: 72 KTDAKVADAAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQS 131
Query: 116 QAFCMVIETKSQEALEALSLVACT------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ + + Q ++ +
Sbjct: 132 LAFEVLSQANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQMHQL 191
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
V + A+ +Y N+G+AFQ++DD+LD + + +GK G+D
Sbjct: 192 KTGALIQAAVLLGGINGEIEKTAAISTYAKNIGLAFQVIDDILDVEADSSTLGKTAGKDA 251
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
KPT IL L + + A
Sbjct: 252 DTNKPTYVSIL--------------------------------------GLAEAKLHAQQ 273
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A D+L +S+ + L E+ F QR
Sbjct: 274 LYDNAIDALTPFGESALR--LRELAGFITQR 302
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M +D + + + + + S + E + + + Y + GGKR+RP+LT A ML
Sbjct: 1 MFKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHK 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ CA+E IHT +L+HDD+ +D+ RRG + V+G ++L GD LL+ A
Sbjct: 61 EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-------DVTEEDYLHVIKSKTA 170
F ++ A + L + C + + + E+ + KT
Sbjct: 121 FQLMTSNTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF+A++E+ ++ + R AL Y LG+ FQ+ DD+LD G + E+GK G D R
Sbjct: 181 ALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T +L L +++AY
Sbjct: 241 QHKSTYVSLL--------------------------------------GLEQAKHQAYLV 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G +A D+L + S L ++D+ L+R N
Sbjct: 263 GSQAHDALNLV--SYDTTILSALIDYLLERTN 292
>gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 368
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/347 (21%), Positives = 129/347 (37%), Gaps = 40/347 (11%)
Query: 13 EKVNFLILKRIC-----------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
V L+ + + S VE++ + + GGKRLRP+ L +
Sbjct: 23 ADVAQLLEEFLAAKSIEVGQITTSAVEIVNAIT--SLTRGGKRLRPLFAFWGYLGAGGQA 80
Query: 62 D--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS------------- 106
+ + V L A+E A L+HDD++D+S RRG+ + + Q
Sbjct: 81 EDRDIVRLGVALELFQAAALIHDDIIDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGM 140
Query: 107 ---VLVGDFLLSQAFCMVIETKS------QEALEALSLVACTLAEGELRQLSLSKNLDVT 157
+L GD LS + + E S + + V L + +
Sbjct: 141 ASAILTGDLCLSLSEEVFSEISSLTAQARTIFNQMRTQVMAGQYLDVLEESAGPAYDPKE 200
Query: 158 EEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
I + +AG S+ + ++ + LG AFQL DDVL
Sbjct: 201 AVKRARTIVRFKSAKYSTENPFLLGGALAGASESLMEHYSAFALPLGEAFQLRDDVLGVF 260
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ GK G D GK T + A + E++F ++ + + E + + I+R
Sbjct: 261 GDPEITGKPTGGDLLEGKRTELIAHALLLSSPEEQDFIQTRLGAVDLGKEEVLRLSSILR 320
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRL 321
E+ AL TE ++ +L L + + L ++ + +R
Sbjct: 321 ESGALAATEQSISDLTAQSDLALSTLQVTPLAHAGLQQLSNAVTKRS 367
>gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-03]
gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-07]
gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-22]
gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-26]
gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-32]
gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-12]
Length = 312
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 57/334 (17%)
Query: 6 DLTLKDMEK----VNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L +DM + I + + + ++Y GGKRLR L + TA +
Sbjct: 19 ALLKQDMGARARVIEHTIDTLLPLTTGGDARLIEAMRYATLGGGKRLRGYLAIVTASLFG 78
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+A ++E +H +L+H +DD +RRG+ + + T++L GD L ++
Sbjct: 79 VPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILAGDALQTK 138
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--------EDYLHVIKSK 168
AF ++ +++ + AE + + E E+ H+ K
Sbjct: 139 AFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEVRHLHALK 198
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + E +++ +R+ L+SYG N+G AFQ+ DDVLD E+GK G+D
Sbjct: 199 TGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDATATAEELGKTAGKD 258
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+GK T ++ + + A
Sbjct: 259 EASGKSTF----------------------------------VALL----GIEGAKAEAL 280
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A L + L ++ + ++R N
Sbjct: 281 RVTEEAIADLEPF--GAQADRLRDLAYYVIERKN 312
>gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4]
gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4]
Length = 295
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 76/325 (23%), Positives = 121/325 (37%), Gaps = 51/325 (15%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
ME+V IL + ++Y + GGKR+R +L A +
Sbjct: 10 IQTRMERVLDDILPAANIIPSRLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVEQS 69
Query: 68 ACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------- 118
A A+E IH +L+H +DD LRRGK + + + T++LVGD L + AF
Sbjct: 70 AAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQTLAFKVLAEPG 129
Query: 119 --CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ A++ + +A G+ L+ E I A++ +AA
Sbjct: 130 LLRDAARQLHMVHILAMASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIRAAA 189
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + V +A+ Y +G+AFQ+VDD+LD + +GK G+D + KPT
Sbjct: 190 LLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGKTAGKDADSNKPTY 249
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
IL L + A +A
Sbjct: 250 VTIL--------------------------------------GLERAKQLAQELYDEALA 271
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
L DS+ + L ++ F QR
Sbjct: 272 PLAAYGDSALR--LQQLAKFITQRS 294
>gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
Length = 288
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 51/323 (15%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ +N + K I S + + + +KY + +GGKR+RP++ L T ML + A
Sbjct: 5 IDIINTSLNKSIQSS-PLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSA 63
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IHT +L+HDD+ +D+ RRG++ V+G ++L GD LL++AF +V +
Sbjct: 64 LALEMIHTYSLIHDDLPAMDNDDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSNDTT 123
Query: 127 QEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
E ++++ + S+ + E + K+KT L + ++
Sbjct: 124 IEDSVKVNIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMA 183
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D N K T
Sbjct: 184 AVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTY--- 240
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ ++ A E + ++ A + L
Sbjct: 241 -------------------------------VSLLGKDGA----EEKLNNHQCLALNCLN 265
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ D L ++VD R +
Sbjct: 266 QISDQYDTSELSDIVDLFYNRDH 288
>gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
Length = 298
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/323 (20%), Positives = 122/323 (37%), Gaps = 54/323 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + + + + S + + + ++Y GGKR+RP+L A ++ ++ +
Sbjct: 15 QTMEDALARLLPNPESAPQRLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGA 74
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS- 126
A+E IH +L+HDD+ LRRGK + + + T++LVGD L + AF ++
Sbjct: 75 AVEMIHAYSLVHDDMPCMDDDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDG 134
Query: 127 --------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
A + +A G+ L+ E A++ +A L
Sbjct: 135 VAAAAQLEMVRTLARASGHGGMAGGQAIDLASVGQTLSLPELEYMHCLKTGALIRAAVLL 194
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + L + +G+AFQ+VDDVLD + +GK G+D N KPT
Sbjct: 195 GALAGTPLSAEETERLDHFAKRIGLAFQVVDDVLDVDADTATLGKTAGKDAANDKPTYVS 254
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L +A A +A +L
Sbjct: 255 LMG-------------------------LPEARAF-------------ARELRDEAFAAL 276
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ L ++ D+ + R
Sbjct: 277 DGF--GPAAQRLKDLADYIVARS 297
>gi|126310793|ref|XP_001378652.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase
[Monodelphis domestica]
Length = 390
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/345 (17%), Positives = 124/345 (35%), Gaps = 41/345 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVV------KYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ +FS R M +
Sbjct: 58 SLRCLLSDELSNIAMQVRKLVGTRHPLLNTASSLLRNEQHGLFS-----RNMYIFLIKKV 112
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSAL-RRGKVAARLV 100
LA E IHTA L+H +V+ S L +
Sbjct: 113 SGPSTRTLHCQNVNMISGIYSCQRSLAEITELIHTAFLVHRGIVNLSELNSSDGPLKDMR 172
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + + ++ + +E +S L +G + D
Sbjct: 173 FGNKIAILSGDFLLASACTGLAQLQNTKVVELVSSALIDLVQGIYCENSTSAEENCITDD 232
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + I + L + + + + +A V+ YG ++ ++ ++ D+ +
Sbjct: 233 IGISTWKEQIFLSHSALLAKSCQAAMELAKHDTEVQDMAFQYGKHMSMSHKINSDLQPF- 291
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
GK G N V+ G + + G ++ L++A +
Sbjct: 292 ----IRGKCNGSIAFNLNSAPVVLHQEFLGRETWIKQIREAQEKGTLNYSKLQEA---IL 344
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + +G KA ++L C P S + +L +V + + R
Sbjct: 345 AGKGVTSAIDLCRYHGNKALEALECFPPSEARSALENIV-YAVTR 388
>gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
Length = 330
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 11/319 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + +L R+ + D+++ GGK LR +LT+ +AL + + A A+E
Sbjct: 10 QALQERLLARLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLEAATALE 69
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKS 126
L+HDD+ D S RRG+ A + ++ GD + ++ +
Sbjct: 70 LFQNWILVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPP 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ LE +V T L L + + + A ++A +
Sbjct: 130 EVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLA 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ A + G+ LG AFQ+VDDVL+ G + G+ + + + + +
Sbjct: 190 GKTPPAAYEEGGLRLGTAFQIVDDVLNLEGGEAYGKERAGDLYEGKRTLILLRFLEEAPP 249
Query: 247 KREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR----CL 301
+ + E + + +RAL + A + L L
Sbjct: 250 EERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFRNL 309
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L ++ ++R
Sbjct: 310 PGKEALDHLRGLLAALVER 328
>gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
45221]
gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
45221]
Length = 344
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--R 60
+ ++ ++ + ++ + D V+Y+ GKRLRPML + R
Sbjct: 19 EVYAPVKPYLDDLDVFLQSQVAEMEPEVQDHVRYVFGHSGKRLRPMLVAYSGWEGPALTR 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D+ V L IE +H ATL+HDD++D++ R + A +G +VL+GD L S A +
Sbjct: 79 ADDLVKLGSVIELVHLATLVHDDILDEADTRHRQETAAKKFGPAAAVLIGDVLFSHALKL 138
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + E ++ + GE+ Q ++ + E Y VI+ KTA LF + +
Sbjct: 139 AAEFDTNEVCRTVAQATSRVCAGEIAQTYQRGEVNYSREFYFRVIQLKTAELFEVSCRLG 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +AG + +A +G +LGIA+Q+ DD++D + + +GK +G D GK TLP++L
Sbjct: 199 AKVAGYTDEFSEAAGLFGRHLGIAYQIFDDLVDLYADESMIGKTLGTDLDKGKFTLPLLL 258
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ E++ G +V + + + + + + A +++
Sbjct: 259 LLEKVPSSERDRLLERFKAGDKTVA--AEFTKRLHDFPIFEEVVAEFENQLKLATEAVVP 316
Query: 301 LPDSSWKKSLMEVVDFC 317
D + ++ ++ +
Sbjct: 317 FADLAPVDAMQKIAELV 333
>gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+]
gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+]
Length = 467
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/296 (18%), Positives = 110/296 (37%), Gaps = 8/296 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK R L A LE ++ + + +HTA+LL DDV
Sbjct: 177 KDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKVVSMLHTASLLVDDVE 236
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + K+ + + + L G+
Sbjct: 237 DNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPKVVNIFAEELLNLHRGQG 296
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + + + ++ +G+ F
Sbjct: 297 MDLYWRDTLTCPTEDEYLEMVGNKTGGL---FRLGIKLMQAESRSLTDCIPLVNVIGLIF 353
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + + K + ED GK + PVI + + + + + + E
Sbjct: 354 QIADDYQNLWSKEYTANKGMCEDLTEGKFSFPVIHSIRS--NPSNSQLLNILRQKTTNEE 411
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A M+ + T+ ++ ++A+ L + + L V L R+
Sbjct: 412 VKRYAVSYMQSTGSFDYTKKVVHTLIERARRMADELDEGKGRAVL---VHKILDRV 464
>gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73]
gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73]
Length = 301
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 59/341 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + + E++ + +++ + +GGKRLRP L +
Sbjct: 1 MHEFTTLLAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVG 110
+A + + ++ + + A+E +H +L+HDD+ D+ LRRGK + + T++L G
Sbjct: 61 SAAIFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTL---------AEGELRQLSLSKNLDVTEEDY 161
+ LL+ AF ++ ++ + T G ++ E
Sbjct: 121 NALLTFAFEIIAHKEAYSFSPKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQDESAT 180
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+ + + KTA L A + +++ ++ L S+G +G+AFQL DD+LD + +
Sbjct: 181 ITLQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLVSQTKIL 240
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK G+D K TL + L
Sbjct: 241 GKTAGKDQTANKATLVNLY--------------------------------------GLD 262
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+++ + KA++ L LP + L + F R N
Sbjct: 263 ESQKKRNELITKAEELL--LPFGAKAIPLKQAAHFIATRKN 301
>gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
Length = 306
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 149/322 (46%), Gaps = 23/322 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ + +E++ I+ + S ++ GK LR L L A
Sbjct: 4 LEQINQKIEDFLEELESPIVLELSSKIQR------------GKMLRSKLALNIA----TE 47
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ +LL IE I +A+LLHDDV+D++ +RR K + + G++ ++++GD L S+AFC
Sbjct: 48 SEECILLCAIIEMIQSASLLHDDVIDNATMRRSKPSINAIAGDKNAIMLGDILYSKAFCE 107
Query: 121 VIETKSQEALEALSLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + + + GE+ + L+K + E YL +++ KTA L +
Sbjct: 108 LTQFQENFPMIPRIVANAVTTLAIGEMEDVELAKQFNANEAKYLTMVEHKTASLIESTAY 167
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ ++G ++ + YG NLGIAFQ++DDVLD +GK DF+ GK TLP
Sbjct: 168 AAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLDIVSSTQTLGKPALSDFKEGKTTLPY 227
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I + +K ++ ++ + ++ + A+ + A G+ +++
Sbjct: 228 IYLYHSLNTIDKKRLENAFGK-ELEQKEQDWILENLKASGAIQKSIDLAKHLGEVGIEAI 286
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
+ L++++ + R
Sbjct: 287 S----NHSCDKLIKIMQEMINR 304
>gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 293
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
MK L+ K + +N + K I S + + + +KY + +GGKR+RP++ L T ML
Sbjct: 1 MKKLQ--MNKLINIINTSLNKSIQSS-PLKTNLEESMKYSLNAGGKRIRPVILLLTLKML 57
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+
Sbjct: 58 NKDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLT 117
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSK 168
+AF +V + E +S++ + S+ + E + ++K
Sbjct: 118 KAFELVSNDTTIEDSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETK 177
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + ++ + IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D
Sbjct: 178 TGALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSD 237
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T ++ + A E +
Sbjct: 238 IVNHKSTY----------------------------------VSLLGKEGA----EEKLN 259
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ A + L + D L ++VD R +
Sbjct: 260 NHQYLAMNCLNQISDQYDTSELSDIVDLFYNRDH 293
>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
Length = 293
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 79/335 (23%), Positives = 137/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-- 174
AF ++ E ++ ++L+ + + D+ E+ I+ +++
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHARKT 180
Query: 175 -----AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVAIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004]
gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus bovienii SS-2004]
Length = 305
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/341 (19%), Positives = 121/341 (35%), Gaps = 58/341 (17%)
Query: 2 KMLEDLTLKDMEK----VNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATA 54
+ + + + VN ++ S + + + GGKRLRP L +
Sbjct: 3 EQYKAPFEEHLSACQQHVNDKLMATFSSLPFLDSPLATAMLHGAVLGGKRLRPFLVYSVG 62
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112
M ++ A A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD
Sbjct: 63 EMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILAGDA 122
Query: 113 LLSQAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYL 162
L S AF ++ + + L + G+ L
Sbjct: 123 LQSLAFEILAKQDMPNIALSDRLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLATLEQ 182
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
A++ +A + V L Y +G+AFQ+ DD+LD G + +G
Sbjct: 183 IHRHKTGALICTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQVHDDILDVIGNTDVIG 242
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G D + GK T P ++ L
Sbjct: 243 KRQGNDQQLGKSTYP----------------------------------ALL----GLEQ 264
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKK-SLMEVVDFCLQRLN 322
+ +A ++A +L L S+ L ++ F ++R +
Sbjct: 265 AKKKARDLYEEALAALTELEKQSYNTVILKKLAGFIIERNS 305
>gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The
Methanosarcina Mazei
Length = 295
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 64/305 (20%), Positives = 120/305 (39%), Gaps = 39/305 (12%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V I + I + + V+++ SGGKR+RP++ L + + + A A+E
Sbjct: 14 VEAGIKESITLIEDPGLKKXVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEX 73
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
H+A+L+HDD++D +RR +A +G ++L GD+L+ A + + E +
Sbjct: 74 XHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLI--AKSIAFISPYGEKVIQD 131
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
A ++ E DY I KTA LF+ + + + G + + +
Sbjct: 132 FGKAGXDXAEGEVLDLKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAER 191
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G LG A+Q+VDD+L++ G++ + TLP I +
Sbjct: 192 FSHFGNALGTAYQIVDDILEFLE------VVEGKESKFTSETLPHIYXKSTSKEE----- 240
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
AL + + AK++L + + L ++
Sbjct: 241 -------------------------ALKKSIDCVKLHVAAAKETLETFRECPARDKLFQI 275
Query: 314 VDFCL 318
D+
Sbjct: 276 TDYIT 280
>gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 308
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 114/319 (35%), Gaps = 53/319 (16%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + D ++Y GGKRLRP L + +A + +L+ A+E IH
Sbjct: 31 DELMSDEI-ARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFGIDRAAALLVGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF +V +
Sbjct: 90 CYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L+ LA + + D D + + KT L +++
Sbjct: 150 LLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAIL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 210 GQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A +L
Sbjct: 267 -----------------------------------GIDGAKQRLRDLIARADQALAPF-- 289
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ L F +R +
Sbjct: 290 GERGEVLRAAARFVAERKS 308
>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 297
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK + + + + K + S E I ++Y I +GGKRLRP L AT +L
Sbjct: 1 MKDFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KS 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+ +KAK+ + K L+ + DF R
Sbjct: 263 NNTVEKAKEIIKNKFGKEKGK-VLISLADFIKNR 295
>gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST]
gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 113/286 (39%), Gaps = 5/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + Y+ GK++R L LA L D ++ ++ +H ++LL DD+ D
Sbjct: 23 DETLLQPFSYIQQIPGKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSSLLIDDIED 82
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ +++L A V + +A + L G+
Sbjct: 83 NSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATRVYTEQLLELHRGQGM 142
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ N E + + ++ + + + R+ LG+ FQ
Sbjct: 143 EIYWRDNYACPTETEYKQMTIRKTGGL---FMLAIRLMQLFSENRKDFTKLTAILGLYFQ 199
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK + PVI A Q T++ + VE
Sbjct: 200 IRDDYCNLSMKEYSENKSYCEDLTEGKFSFPVIHAIQ--TQKYDKQVLHILRQRTRDVEV 257
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ ++ + + T S ++A+ + L + ++L+
Sbjct: 258 KRYCITLLEKLGSFQYTRDVLESLDKEARKEVESLGPNPIMEALLN 303
>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
Length = 293
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 83/333 (24%), Positives = 143/333 (42%), Gaps = 51/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ LE + V+ +L + + V + ++Y + +GGKR+RP+L AT + L
Sbjct: 1 MQPLEQFLKTSKQLVDEQLLAEVDARVITPTLKKAMRYSLEAGGKRIRPILLFATLISLR 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G+ T++L GD LL+
Sbjct: 61 TELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGLLTL 120
Query: 117 AFCMVIETKSQE-------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ + +++ VT E+ + + KT
Sbjct: 121 AFSLLSEEEALPAESRVKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIHRKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L +A+ ++IA + L Y N+G+AFQ+ DD+LD G+ ++GK IG D
Sbjct: 181 GALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQKLGKKIGMDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L LV +
Sbjct: 241 IMHKSTYPGLLT--------------------------------------LVGAQEALND 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK+++ L S L+E+ D R +
Sbjct: 263 HVSRAKEAVSGL--SLTSNYLVELADLIAGRDH 293
>gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 291
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/329 (19%), Positives = 123/329 (37%), Gaps = 51/329 (15%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERSLEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G +D + KT L
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A++ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D + K
Sbjct: 183 RASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAHSK 242
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + + + +
Sbjct: 243 STYP----------------------------------ALL----GMDGAKAKLAELATR 264
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D L+ P ++L + F + R +
Sbjct: 265 MHDVLQ--PYGQPGETLASLGRFAVDRAH 291
>gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
Length = 299
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 116/324 (35%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+ N + + I + + + Y GGKRLRP L AT M A
Sbjct: 12 EQANEALRRFIAPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAA 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG + +G ++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMV 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L + G+ L + A++ +A
Sbjct: 132 DVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL Y N+G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L +A+ A+ S
Sbjct: 252 ----------------------------------ALL----GLEQARKKAHDLIADARRS 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + ++ +QR
Sbjct: 274 LDELAAQSLDTSALEALANYIIQR 297
>gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 384
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 62/349 (17%), Positives = 115/349 (32%), Gaps = 41/349 (11%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLAT 53
L T ++ V+ + + ++VE + ++ + + +GGKR+RP
Sbjct: 29 LAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFATTARDCVLAGGKRVRPTFAYWG 88
Query: 54 AL-MLEYRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN------- 103
++ + + A+E +HT L+HDDV+D S RRG A
Sbjct: 89 WRGVVGGEEPLCSVLPALSALELLHTFALVHDDVMDASDTRRGLPTAHRAAAARHRAAGH 148
Query: 104 ------------------QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
+ + + + L
Sbjct: 149 TGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAGQFLDVL 208
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + + V A + + A YG+ +G AF
Sbjct: 209 GENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGLAVGEAF 268
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+L G+ GK G+D R GKPT ++LA Q ++ + + S
Sbjct: 269 QLRDDLLGVYGDPETTGKPAGDDLRTGKPTALLMLARQLADPAQRRVLERAGS--VTSAT 326
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV 313
+ + ++R+ A E +A +L P D + + +L +
Sbjct: 327 EVDRLADVVRDTGATARVERMISDRVTEALAALGTAPIDETARTALTGL 375
>gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII]
gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
Length = 306
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPLPFGNSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SFANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDALQTLA 128
Query: 118 FCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ E + + L + G+ L + +
Sbjct: 129 FSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + +L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAQTKA 270
Query: 288 YSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
Q+A ++L L S SL + F ++R N
Sbjct: 271 MDLYQEALEALDELAKQSYNTDSLQALARFIIERNN 306
>gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
Length = 293
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 134/333 (40%), Gaps = 55/333 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + V+ +L I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLNLFLEHYKKVVDESLLTEINKRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALQ 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V +A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 ADPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ + G + ++N VT + + KT
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+G+ FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKKTGGDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FMNKSTYPGLLT--------------------------------------LDGAKSALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
+ AK +L D + L+++ D R
Sbjct: 263 HVSIAKSALSGHGFDD----EILLKLADLIALR 291
>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 308
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + + ++Y GGKRLRP L + +A + +L+ A+E IH
Sbjct: 31 DDLLPDEI-ARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFGVDRAGALLVGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF ++ + + +
Sbjct: 90 CYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIITRDEVHQDAKVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA + + D D + + KT L +++
Sbjct: 150 LDLNRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAIL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 210 GQASPEHYKALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A ++L
Sbjct: 267 -----------------------------------GVDGAKQRVRDLIARADEALAPFG- 290
Query: 304 SSWK-KSLMEVVDFCLQRLN 322
K + L F +R N
Sbjct: 291 --AKGEVLRAAARFVAERKN 308
>gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A]
Length = 307
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKAIQNKIASWIKEIESAFIDELFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVILGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GKNNLILEKLAQDVIYRT 306
>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 65/335 (19%), Positives = 125/335 (37%), Gaps = 54/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++ + +++ ++ + + + I + + Y + +GGKRLRP+L +
Sbjct: 3 DNFKERFSQAVKETETVVYSYLPEETGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFG 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
G A+E IHT++L+HDD +D+ RRGK+ +G +VL GD L+
Sbjct: 63 GNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLAGDALMIY 122
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-- 174
AF + S A A + A + + + V E + +
Sbjct: 123 AFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREKLDFIYRL 182
Query: 175 -------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ + +++AG + +++ +G+AFQ+ DD+LD E+GK +
Sbjct: 183 KTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEELGKPVLS 242
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T + L +
Sbjct: 243 DEKNEKTTYVTLE--------------------------------------GLEKAKRDV 264
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L LP + + L +++ + R N
Sbjct: 265 KEISDRAAGRLAGLPGKN--EFLYNIIEMLVNRKN 297
>gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
Length = 294
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 79/319 (24%), Positives = 123/319 (38%), Gaps = 53/319 (16%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + I E I + Y + +GGKRLRP+L LA A M + D + CAI
Sbjct: 14 IEERLHNIIPEVDEYCLDIEQAMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVINFGCAI 73
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+ A+ ++I +
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESR 133
Query: 130 LEALS--------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
G S+ + + + + KT L A +E ++
Sbjct: 134 NIEKMRAAGIVAKYAGALGMVGGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAPVEAAA 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+I G + L Y NLG+AFQ+ DD+LD G V MGKN G D K T +
Sbjct: 194 VICGADKKEFELLSGYAANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCHKSTYVTMY- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L +++ + Q+ L
Sbjct: 253 -------------------------------------GLEESKKLLQTVTQEGISCLDAF 275
Query: 302 PDSSWKKSLMEVVDFCLQR 320
D + + E+ R
Sbjct: 276 GDKG--QFMKELALSLTVR 292
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + K + S E I ++Y I +GGKRLRP L AT +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 QNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + + I
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA ++ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRL 321
+ +KAK+ + + K L+ + DF R
Sbjct: 263 NNTVEKAKEIIKNKFGEEKGK-VLISLADFIKDRK 296
>gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 311
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/332 (20%), Positives = 119/332 (35%), Gaps = 53/332 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + I + + D ++Y GGKRLR LT A +
Sbjct: 20 LRSSLSNRATAIEAAIDSLLPPVPGAEGRVVDAMRYATLGGGKRLRGYLTAEVASLFGVE 79
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A ++E +H +L+HDD+ +D+ LRRG+ + + T++L GD L + AF
Sbjct: 80 PARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDALQTMAF 139
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--------EDYLHVIKSKTA 170
++ +T + + + LA + + + + + KT
Sbjct: 140 EILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLHALKTG 199
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A E +++ R + +YG +LG AFQ+ DDVLD E+GK G+D
Sbjct: 200 CLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDATASAEELGKTAGKDQA 259
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T ++ + A
Sbjct: 260 AGKSTY----------------------------------VALL----GVDGAAREARRV 281
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A+ L + L +V + + R +
Sbjct: 282 AEQAESHLDVF--GAEADRLRNLVQYVVDRRS 311
>gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS]
gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS]
gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS]
Length = 359
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/328 (21%), Positives = 118/328 (35%), Gaps = 27/328 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLLACAIEFIHTAT 78
I SD + ++ + GGKRLRP + R + +LL A+E +H
Sbjct: 31 AYIGSDYAELTAALEEFVLRGGKRLRPAFAYWGWRAVADRPADSGVLLLFSALELLHACA 90
Query: 79 LLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
L+HDDV+D SA RRG F LS A +
Sbjct: 91 LVHDDVIDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLSAAILAGDLSLVWADDIVA 150
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
S+ A ++++ +V +L + + A+ + +V +
Sbjct: 151 SVDLPLDAHRRVQRVWADIRTEVLGGQFLDIAAEASGAQTVASAMTVNTYKTASYTVSRP 210
Query: 194 -----------------LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
G ++G+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 211 LQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 270
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ A + K ++ + +S +++ + AL E R +++
Sbjct: 271 LLAEAVELAEKTDQGTAALLRSSIGTDLSESQVRELCSAIESVGALTAVEERIALLTRRS 330
Query: 295 KDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++L P D K L E+ R
Sbjct: 331 LEALDAAPIDPQAKAGLTELARLAANRS 358
>gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661]
gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661]
Length = 299
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 120/334 (35%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
DL +VN + + I + + ++Y GGKRLRP L AT ML
Sbjct: 2 DFSDLLTAHHTRVNQALQRFIAPLPFQNSPLVNAMEYGALLGGKRLRPFLVYATGEMLGA 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E IH +L+HDD+ LRRG+ + +G T++L GD L + A
Sbjct: 62 DDAALDAPAAAVECIHAYSLIHDDLPAMDDDSLRRGQPTCHIKFGEDTAILAGDALQTLA 121
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ +T + + G+ L+
Sbjct: 122 FSILADTPMPGVSAEYRVAMLSELAQASGVAGMCGGQALDLAAEGQQVDLAALEQIHRHK 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ SA + + AL Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 182 TGALIRSAVRLGALAAGERGRAALPALDRYANAIGLAFQVQDDILDVVGDTAIIGKRQGA 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T P ++ L +A
Sbjct: 242 DQHLGKSTYPALM--------------------------------------GLDGARAKA 263
Query: 288 YSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
+ Q++ +L L S+ SL + + ++R
Sbjct: 264 WDLYQESLSALETLAAHSFTTTSLQALASYIIER 297
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 85/331 (25%), Positives = 145/331 (43%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNF---LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ ++ ++++ I++ + V+ + D + Y + +GGKR+RPML LAT
Sbjct: 5 TLKHFFDEEKKQIDNRLPHIIENLNIPVQ-LRDAMIYSLKAGGKRIRPMLLLATLRGYNK 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +ACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +
Sbjct: 64 PLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYS 123
Query: 118 FCMVIETKSQEALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
F ++ + L L+ G + + ++ + + KT
Sbjct: 124 FQLISSSMLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQKIHHHKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + ++E +++AGV + R +L S+ +LGIAFQ+ DD+LD G+ + +GK IG D
Sbjct: 184 DLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSDEE 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T P +L L + + +
Sbjct: 244 NDKNTYPKLL--------------------------------------GLDGAKQKLAFH 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+AK L S L E+ D+ R
Sbjct: 266 ISEAKKYL--YETSIEHTLLEEMADYIAMRS 294
>gi|227538591|ref|ZP_03968640.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241510|gb|EEI91525.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 127
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ ++G +GIAFQ+ DD+ D+ +++GK +G D + K TLP+I A + K EK
Sbjct: 1 MHAFGEKVGIAFQIKDDLFDFGL--DDVGKPLGNDIKEKKMTLPLIYALSQTDKSEKRRI 58
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ + + + + + +R + L + + Y Q+A + L P+ ++ L ++
Sbjct: 59 INLVKNHNEDNKKVAEVIAFVRSSGGLDYATEKMFQYQQEAFEILNSFPEGIYRTGLEQL 118
Query: 314 VDFCLQRL 321
V + +R
Sbjct: 119 VRYTTERK 126
>gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 380
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/350 (19%), Positives = 118/350 (33%), Gaps = 42/350 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLT---LATALMLEY 59
V + + + + ++ I GGKR+RP+ A
Sbjct: 29 SAVKGALEAFLDERYAEVEKIGPPVTRSVQHLRDFILGGGKRIRPLYAWTGFFGARAAGG 88
Query: 60 ----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------L 99
+ + ++E I L+HDD++D S RRG
Sbjct: 89 VGSEDPEAVLRAVSSLELIQACALIHDDIIDASDTRRGNPTVHRAVEARHSKDDLFGDSA 148
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELRQLSLSKN 153
+G ++L+GDF L A M + ++ A + + L +
Sbjct: 149 DYGRNEAILIGDFALIWAEDMWRYSGLSEAALTRAAEPWRGMRTEVIGGQLLDIALEAAA 208
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
+ E A L + + IAG +A + YG ++GIAFQL DD+L
Sbjct: 209 NESVEMANNVNRYKTAAYTIERPLHLGAAIAGAPADTIEAFRGYGRDIGIAFQLRDDLLG 268
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAF 271
G+ GK G+D R GK T+ + A R + + + L +
Sbjct: 269 VFGDEAVTGKPAGDDLREGKRTVLLAAALNRLDATDPVSAARLRDRVGRTSDRDELAELA 328
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
I+ + A+ D E + + L D +L ++ +R
Sbjct: 329 AIVESSGAIADVEKQIADLTESGLAHLSRAGIDGEVANTLRDLAIRATER 378
>gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
Length = 288
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + KR+ + + + ++Y GGKRLR +L AT + A
Sbjct: 6 AQIELALDKRLTAQKQPGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGANPVALDAAA 65
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+H ++DD LRRG+ + T++LVGD L + AF + +
Sbjct: 66 AAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMAFETLCDNSL 125
Query: 127 QEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A + L + +A G+ L A++ ++ L
Sbjct: 126 TAAQQVLMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLKTGALIRASVLLG 185
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + + Q L+ Y +G+AFQ+ DDVLD + +GK G D KPT P
Sbjct: 186 ALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIADTETLGKAQGADIALNKPTYP-- 243
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ L + +A + +KA L
Sbjct: 244 --------------------------------ALL----GLEKAQQKAVALVEKALGQLA 267
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F ++R +
Sbjct: 268 ELD--FDTQVLAALAQFVVKRSH 288
>gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
Length = 292
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 43/307 (14%)
Query: 19 ILKRICSDVEMIP------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
I K + VE I VV ++ SGGK+ RP++ L ++ + +N + A AIE
Sbjct: 12 INKALIDFVEEIDNGSNMKKVVAHICQSGGKKTRPVILLLSSRICGSEIENALDAALAIE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IH+A+L+HDD++D LRRG A V+G ++L GD+L+S++ ++ + E
Sbjct: 72 LIHSASLIHDDLLDRGVLRRGVKTAHEVYGTAAAMLAGDYLISKSIELISSYGKEIGTEF 131
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
GE + L + +Y + I+ KTA LF+A+ + + +AG
Sbjct: 132 GRAGMEMAE-GEAMDVDLLEKNINNRVEYFNCIEKKTASLFAASAVMGAYVAGADEDTVS 190
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ +G LG A+Q+VDD+L+Y +VN
Sbjct: 191 KFRLFGNKLGTAYQIVDDMLEYTTKVNNKESIH--------------------------- 223
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
IS + M + +A+ T +A + + P S + L E
Sbjct: 224 ---------ISPSLVDIYRQDMADAKAIEKTRGVVEQLVSEAHEIINQFPSSQSRNKLHE 274
Query: 313 VVDFCLQ 319
+ +
Sbjct: 275 ITNHATS 281
>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
Clip81459]
gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816]
gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220]
gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
Length = 293
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVAIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 18/292 (6%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M L E + + V + + I + + Y + +GGKR+RP+L L+T
Sbjct: 1 MAQLSVEQFLNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLL 114
L + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL
Sbjct: 61 LGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTL---------AEGELRQLSLSKNLDVTEEDYLHVI 165
+ AF ++ E + ++ L + +T + ++
Sbjct: 121 TYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT + ++ +LI G + L + +LG+AFQ+ DD+LD G ++GK +
Sbjct: 181 RHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFW---KSTINDGKISVENLKKAFIIM 274
G D N K T P +L+ ++ + + + + L ++
Sbjct: 241 GSDQSNNKATYPALLSLAGAKEKLAFHIEAAQRHLRNADVDGAALAYICELV 292
>gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S]
Length = 293
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y I +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E + ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVTIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Rhodopseudomonas palustris CGA009]
Length = 308
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 114/319 (35%), Gaps = 53/319 (16%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + D ++Y GGKRLRP L + +A + +L+ A+E IH
Sbjct: 31 DELMSDEI-ARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFGIDRAAALLVGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF +V +
Sbjct: 90 CYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L+ LA + + D D + + KT L +++
Sbjct: 150 LLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAIL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 210 GQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A +L
Sbjct: 267 -----------------------------------GIDGAKQRLRDLVARADQALAPF-- 289
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ L F +R +
Sbjct: 290 GERGEVLRAAARFVAERKS 308
>gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup]
gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup]
Length = 300
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 76/341 (22%), Positives = 129/341 (37%), Gaps = 60/341 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L K V + + S + + ++Y + +GGKRLRP L +
Sbjct: 1 MHEFTTLLAKHGHTVEKRLDTLLSDQIQNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQ 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVG 110
+A + + + + +ACA+E IH +L+HDD+ LRRGK + + T++L G
Sbjct: 61 SAALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--------KNLDVTEEDYL 162
+ LL+ AF ++ S + + + +LA+ L + D +
Sbjct: 121 NALLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDII 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KTA L S A + ++I + + L +G LG+AFQL DD+LD +G
Sbjct: 181 TLQHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTANTQTLG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K T + + +
Sbjct: 241 KTAGKDETAQKATFVHLY--------------------------------------GIEE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
T+ + + KA+ L K L + F R N
Sbjct: 263 TQKKRDTLISKAEAFLHPFG---AKALPLQQAAHFSAIRKN 300
>gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 359
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 71/344 (20%), Positives = 119/344 (34%), Gaps = 36/344 (10%)
Query: 13 EKVNFLILKRICSDV--------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGD 62
E V+ ++ + + + ++K + SGGKR+RP+L + + D
Sbjct: 18 ESVDVVLEDFLTAKARTTPQHHLPYLSGLLKDFL-SGGKRIRPLLCVTGWQAVGGGEDTD 76
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------- 105
+A +E H L+HDDV+DDS RRG+
Sbjct: 77 AVFRVAACLEMFHAFALIHDDVMDDSDTRRGRPTIHRTLAALCAADRRPDQIERFGVSGA 136
Query: 106 ------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
++ D LL A + + L + L + Q + DV
Sbjct: 137 VLLGDLALTWSDELLHSAGLTPAQFDAVLPLLSEMRTEVMLGQYLDLQATGELTDDVEAT 196
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
++ L V + IAG +A +Y + LG AFQL DD+L G+
Sbjct: 197 LTVNR-YKTAKYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAFQLRDDLLGVYGDPE 255
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK+ +D R GK T + LA + + +S I + + + I A
Sbjct: 256 STGKSQLDDLRAGKNTTLIALALRGSDSAQAARLRSLIGNPLLDESDAVTIQEIFAATTA 315
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQRLN 322
E +A +L P + +L + R +
Sbjct: 316 REAVERMIDDRRTQALRALDDAPFTADAVNALKLIARMATVRNS 359
>gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
Length = 186
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++ +AL
Sbjct: 1 MPTNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERAL 60
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
K YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++ N +
Sbjct: 61 KDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVR 120
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + + S +K + + AL + A A +L LPDS K +++++
Sbjct: 121 TALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLA 178
Query: 315 DFCLQRLN 322
L R++
Sbjct: 179 KESLVRVS 186
>gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori
Lithuania75]
Length = 307
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 135/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAISLDKVFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ + D +
Sbjct: 111 KAF----FELSKMGEAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ +R++ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQRDQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLVLEKLAQDVIYRT 306
>gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
Length = 307
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 116/319 (36%), Gaps = 53/319 (16%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ ++ I + + + D ++Y +GGKRLRP L + +A + + +L A+E IH
Sbjct: 30 DDILPDEI-ARPKRLMDAMRYSSLNGGKRLRPFLVVESAAVFGVPREAALLAGAALECIH 88
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + T++L GD LL+ AF +V +
Sbjct: 89 CYSLIHDDLPAMDNSDLRRGRPTLHKKTDDATAILAGDGLLTLAFDIVTRDEIHRDANVR 148
Query: 134 SLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVLFSAALEVSSLI 183
L+ LA + + D + + KT L +++
Sbjct: 149 LLLTRALARCAGIGGMVGGQILDLAGEGRFGGNEPIDVARIQQMKTGALLRYGCIAGAIL 208
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
QAL YG LG AFQ+ DD+LD G+ +GK G+D GK T L
Sbjct: 209 GQATAKEYQALDDYGRALGEAFQIADDLLDVEGDAAALGKPSGQDAALGKTTFVTQL--- 265
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A ++ D
Sbjct: 266 -----------------------------------GIEGAKQRVRDLLARADSAVSIFGD 290
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ L F +R N
Sbjct: 291 RAA--VLQAAARFVAERKN 307
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M + L +++ + + + + + + + Y + +GGKRLRP+L A
Sbjct: 1 MADFKQLAARELPQFDAYLKRELAKIQEPTLQKSMTYSVMAGGKRLRPLLLFAVLESTGQ 60
Query: 60 RGDN-HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D A A+E IH+ +L+HDD+ +D+ LRRG+ V+G ++L GD LL+
Sbjct: 61 SIDETAFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTL 120
Query: 117 AFCMVIETKSQEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF + + ++ +T V KT
Sbjct: 121 AFEWLATLNVTAEQRIELVRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ + +++A + AL+ + G+AFQ+ DD+LD EMGK + +D
Sbjct: 181 CLIEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAA 240
Query: 231 NGKPTLPVILAFQRGTKREKNFW 253
K T P++L +
Sbjct: 241 EQKNTFPILLGMSGAQEALHTTC 263
>gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51]
Length = 307
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESGFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 IDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
++ + VN + + + I + +Y + +GGKR+RP+L +A ++
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
ACA+E IHT +L+HDD D+ LRRGK V+G +VL GD LLS AF
Sbjct: 75 XPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEH 132
Score = 43.0 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 8/63 (12%)
Query: 267 LKKAFIIMRENR-------ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ + + ++ L + A +A+D L DS L+ + ++
Sbjct: 232 VDDILDVTKSSKLTYPKLXGLEKSREFAEKLNTEARDQLLGF-DSDKVAPLLALANYIAN 290
Query: 320 RLN 322
R N
Sbjct: 291 RQN 293
>gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
Length = 366
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/354 (19%), Positives = 125/354 (35%), Gaps = 40/354 (11%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPD-------VVKYL---IFSGGKRLRPMLTLAT--- 53
+ + V + + I +++L I GGKR+RP+ A
Sbjct: 11 PIAEVPKHVRAELADFLKEREPQIAQIGRPVTNAIEHLERFILGGGKRIRPLYVWAGFVA 70
Query: 54 --ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVG 110
L+ + + A ++EFI + L+HDD+VD S RRG V +
Sbjct: 71 ADGLLGDEDPQAVLRAASSLEFIQSCALIHDDIVDASDTRRGNPTVHRAVEAEHRKLGWT 130
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE----------- 159
+ I + A ++ + Q + + E
Sbjct: 131 GDPEAFGRSAAILIGDMSLVWAEDMLLDSGLSQAALQRTREPWRAMRTEVIGGQLLDVSL 190
Query: 160 ----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
A L + + IAG + A + YG ++GIAFQL D
Sbjct: 191 EAAAIESVELSDSVNRFKTAAYTIERPLHLGAAIAGAPQKLIDAFRGYGRDIGIAFQLRD 250
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE--NL 267
D L G+ GK G+D R GK T+ + +A QR +++ + + ++ + + L
Sbjct: 251 DQLGVFGDPKVTGKPAGDDLREGKRTVLMAIALQRADEQDPSAAQFLRDNLGATDDPSVL 310
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
K ++ ++ A + E R + Q + L +S + L + R
Sbjct: 311 SKMAQMIEDSGAPEEIEQRIDALTQSGLEYLAAAQVNSEVTELLRSLAIQSTAR 364
>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 291
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
E VN L+ + + + + Y + + GKRLRP L +ATA D + A A
Sbjct: 10 EAVNALLARLFEPTGLHARLKEAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAA 69
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ +V+G ++L GD LL++AF ++
Sbjct: 70 VELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGV 129
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVS 180
E + TLA + E + KTA L A +E+
Sbjct: 130 PAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIHLHKTARLIQACVEIG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
A + + VR AL YG LG+AFQ++DDVLD ++GK G+D GK T P +
Sbjct: 190 GYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTEQLGKTAGKDAEEGKLTYPRFV 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T A ++ + +L
Sbjct: 250 --------------------------------------GVEKTRQMARDVIRRGEQALAE 271
Query: 301 LP-DSSWKKSLMEVVDFCLQR 320
+ S K+L + ++R
Sbjct: 272 VGVRSEPLKALQAL---IVER 289
>gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 291
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 54/321 (16%)
Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
E VN + + + + + Y + + GKRLRP L +ATA D + A A
Sbjct: 10 EAVNAFLARLFEPTGLHARLKEAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAA 69
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ +V+G ++L GD LL++AF ++
Sbjct: 70 VELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGV 129
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVS 180
E + TLA + E + KTA L A +E+
Sbjct: 130 PAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
A + + VR AL YG LG+AFQ++DDVLD ++GK G+D GK T P +
Sbjct: 190 GYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTEQLGKTAGKDVEEGKLTYPRFV 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ T A ++ + +L
Sbjct: 250 --------------------------------------GVEKTRQMARDVIRRGEQALAE 271
Query: 301 LP-DSSWKKSLMEVVDFCLQR 320
+ S K+L + ++R
Sbjct: 272 VGVRSEPLKALQAL---IVER 289
>gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis
carolinensis]
Length = 300
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 115/306 (37%), Gaps = 15/306 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+V + ++ + YL+ GK++R L+ A L D ++
Sbjct: 1 MEQVEETCKR-------VLLEPYHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVT 53
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H A+LL DD+ D+S LRRG A ++G + + +F+ V+ +A++
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINCANFIYFLGLQKVLTLDHPDAVK 113
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+L L +G+ + N E + + + ++ +
Sbjct: 114 VFTLQLLELHKGQGLDIYWRDNYTCPTESEYKAMVLQKTGGLFGLAVGLMQL---FSNYK 170
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ LK LG+ FQ+ DD + + K+ ED GK + P I A +
Sbjct: 171 KDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--T 228
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ + +V+ K + + T +A + L + L+
Sbjct: 229 QVQNILRQRTENVDIKKYCVHYLENVGSFEYTRKTLQELESEAYKQIELLGGNPE---LV 285
Query: 312 EVVDFC 317
+V++
Sbjct: 286 ALVEYL 291
>gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC
35405]
gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC
35405]
Length = 350
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 8/297 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + V+ L+ GGKR RP+L + + + E + L IEF HTA+L+HDD+ D S
Sbjct: 53 IINPVRDLVKRGGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIEDKSD 112
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVACTLAE 142
RRG AA + +G T++ +L +A +I + +L + +L L +
Sbjct: 113 TRRGAPAAHIKYGLDTALNSASWLYFEALNPLINYEVSESVRAVIYSLYSQNLRRLHLGQ 172
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ ++ + ++Y+ +I KT L A E+ + AG + ++G
Sbjct: 173 SMDIGWHSNSDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMG 232
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
I FQ++DDV + + L + I
Sbjct: 233 IGFQILDDVKNITEGNAGKRRGDDIVEGKKSLPLIFYTEENPEGVEKIKLLFKQAAKEGI 292
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCL 318
++ + + ++A+ E + + L + K+ + ++ + L
Sbjct: 293 ESPAVEASISAICSSKAVKRAEDYGKKIVEASLIKLQNNYKQNEAKELIFDLFNTIL 349
>gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818]
Length = 328
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 113/299 (37%), Gaps = 9/299 (3%)
Query: 22 RICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
++ S + E++ + Y+ GK +R L A L L+ D + + +H A+LL
Sbjct: 19 QVSSREEEILQEPYNYITQIPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLL 78
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
DD+ D+S LRRG A V+G ++ +++ +A + +A + + L
Sbjct: 79 IDDIEDNSKLRRGIPVAHSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFTDQLLEL 138
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
G+ + ED + + +++ I + + +
Sbjct: 139 HRGQGMDIYWRDAFVCPTEDEYRTMVLRKTGGL---FQLAVQIMQLFSDDSRDYTPLLNA 195
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
G+ FQ+ DD + + + E K+ ED GK + P+I + + + +
Sbjct: 196 FGLYFQIRDDYANLQSKEYEDNKSFCEDITEGKFSFPIIHSIR--ATPHDRQLLNILKQR 253
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
V+ + M+ + T +A+D + L + L ++D +
Sbjct: 254 TTDVDLKRHCLDCMKRTGSFDYTMKELNRLEVQARDLIAKLGGNP---ILSAIMDKLTK 309
>gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 340
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 114/309 (36%), Gaps = 11/309 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++++ I+ R+ D + D ++ GK LR + L+ A +L+ + + +IE
Sbjct: 27 QRLHEFIVNRLPKDGTPLADAARHHFAKPGKMLRAKMALSAAKLLKIDQAAALHWSTSIE 86
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALE 131
+H A+L+HDD+ D +RRG+VA +G ++ +GD+L++ +F +
Sbjct: 87 VLHNASLIHDDICDGDKMRRGRVAVWAKYGRDVALTLGDWLIALSFELAAEAAQRANTPM 146
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ ++A +A + + D+ I A +
Sbjct: 147 LVKILAKHMATTTAGEAAEFSIQSSYSWDHYLRIAGDKTAPLLTAPLEGIAAMALHGDAA 206
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A+ SY +LG A+Q+ +D+L++R R + + G +
Sbjct: 207 GAIGSYFRHLGEAYQIANDILNFRAGDGAADCGSDLARRAPNAVIVLYRERMEGGEALAF 266
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP------DSS 305
S + L + + AL + R ++ +P +
Sbjct: 267 DKWCKAG----SNDGLAFWLQKIMASDALTQSAGRMQGILDESIRCATEMPVELQTAIAP 322
Query: 306 WKKSLMEVV 314
+ L +
Sbjct: 323 VQNLLEAIC 331
>gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas tunicata D2]
gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas tunicata D2]
Length = 296
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/335 (20%), Positives = 132/335 (39%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ L +++ +V ++ + + + +Y + +GGKR+RP + T +
Sbjct: 2 TIKKLIVENQLRVEGVLDTLLTQPMITDQTLLAASRYSLLNGGKRMRPCMVYVTGEIFGA 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D+ L+A AIE IH+ +L+H +DD LRRG + + T++L GD L + A
Sbjct: 62 NPDDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDALQTFA 121
Query: 118 FCMVIETKSQEALEALSL----------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ +K + + + G+ ++ + +
Sbjct: 122 FEILSSSKFKTINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQIHQLK 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A+L SA L + + Q LK +G N+G+AFQ+ DD+LD G+ +GK G
Sbjct: 182 TGALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGDTAVLGKPQGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + K T P +L L + ++
Sbjct: 242 DLQANKSTYPSLL--------------------------------------GLEQAKLKS 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A ++L +P + L ++ + + R +
Sbjct: 264 QQLYENALNALAQIP--ADTTQLAQLAAYIVSRDH 296
>gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520]
Length = 299
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGCRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
Length = 293
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 75/318 (23%), Positives = 117/318 (36%), Gaps = 51/318 (16%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++ I + + +K+ GGKR+RP L A ML + A AIE
Sbjct: 15 QQLELRI-DALEDIDPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIE 73
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+HDD+ LRRG+ + + T++L GD L + AF ++ +
Sbjct: 74 CIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITP 133
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKTAVLFSAALEVSSL 182
+ LA + K KT L A+E + +
Sbjct: 134 SQNLAMVKALANASGYSGMCGGQAMDLSATNKQIELATLIKLHKLKTGALIRCAVEFAII 193
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A V RQAL + +G+AFQ+ DDVLD E+GK G D + K T P +L
Sbjct: 194 AAKVDGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDTDSNKSTYPKLL-- 251
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + A S + A +L LP
Sbjct: 252 ------------------------------------GLEGAQKTASSLIEDALSALAKLP 275
Query: 303 DSSWKKSLMEVVDFCLQR 320
+S + + E + ++R
Sbjct: 276 YNS--QLIAEFARYIIER 291
>gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
Length = 323
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 29 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 87
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 88 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 147
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 148 ILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 207
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 208 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 267
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 268 QLGKSTYP----------------------------------ALL----GLEQARKKARD 289
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ +L+ L S +L + D+ +QR
Sbjct: 290 LIDDARQALKQLAEQSLDTSALEALADYIIQR 321
>gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
Length = 298
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 51/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK L+ K + +N + K I S + + +KY + +GGKR+RP++ L T ML
Sbjct: 6 MKKLQ--MNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLN 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++
Sbjct: 64 KDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTK 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF +V + E +S++ + S+ + E + ++KT
Sbjct: 124 AFELVSNDTTIEDSVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKT 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + ++ + IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D
Sbjct: 184 GALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDI 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T ++ + A E + +
Sbjct: 244 VNHKSTY----------------------------------VSLLGKEGA----EEKLNN 265
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + L + D L ++VD R +
Sbjct: 266 HQYLAMNCLNQISDQYDTSELSDIVDLFYNRDH 298
>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
Length = 312
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 81/328 (24%), Positives = 126/328 (38%), Gaps = 54/328 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ D V + + D + Y + +GGKR+RP+L L T M
Sbjct: 24 EVLRADCALVEDYLQHCFAGRDSRADLYDAMLYSLLAGGKRIRPVLALETCRMCGGDVTT 83
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ ACA+E +HT +L+H +DD LRRG+ V+G T+VL GD LL+ AF +
Sbjct: 84 ALPFACAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDALLTAAFETI 143
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS--------KTAVLF 173
E + + E + L + + + + S KT L
Sbjct: 144 AEHGTSLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEELQRLKTGALI 203
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
SAA E+ ++AG R A++ Y LG+AFQ+ DD+LD G+ +GK IG D N K
Sbjct: 204 SAATEIGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGDEATLGKPIGSDAANEK 263
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T + + E +
Sbjct: 264 VTFV--------------------------------------SLKGMEACEKLVSEKTEA 285
Query: 294 AKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
AK++L D L + D ++R
Sbjct: 286 AKEALCSTFED---AGFLCWLADKLVKR 310
>gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301]
gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 301]
gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 2457T]
gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017]
gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70]
gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71]
gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671]
gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71]
gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218]
gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304]
Length = 299
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ +L+ L S +L + D+ +QR
Sbjct: 266 LIDDARQALKQLAEQSLDTSALEALADYIIQR 297
>gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 124/336 (36%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + ++V + + + ++Y GKRLRP L + ++
Sbjct: 1 MSAFDTHLTETADRVTVALDALLARPDGPEARVISAMRYAALGPGKRLRPFLLIEAGFLV 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ACA+E +H +L+H +DD LRRG+ + T+VL GD L S
Sbjct: 61 GADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGDALQS 120
Query: 116 QAFCMVIETKSQEALEALSL---------VACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
QAF ++ + ++ + + G++ +++ +
Sbjct: 121 QAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIITRCQR 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L S E +IA + R AL+ + +LG+ +Q+VDD+LD G+ + GK G
Sbjct: 181 MKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGDESLTGKRTG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D GK IL + D R
Sbjct: 241 KDAGQGKANFVSIL--------------------------------------GVKDARDR 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +AK L L +++DF L R +
Sbjct: 263 AARLADQAKAHLDVF--GKDADMLRQLMDFVLARQS 296
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 13/250 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALML 57
M E + + + + + + Y + +GGKR+RP+L LA L
Sbjct: 1 MNPCEAYLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEAL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ +ACA+E +H+ +L+HDD+ +D+ LRRGK V+G ++L GD LL+
Sbjct: 61 GKESSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLT 120
Query: 116 QAFC--------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
AF + + + A + + G+ L + D+ E + +
Sbjct: 121 FAFELLARQRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRG 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT V+F A + ++ ++A +VRQ L++Y LG+ FQ+ DD+LD G E+GK +G
Sbjct: 181 KTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGKPVGS 240
Query: 228 DFRNGKPTLP 237
D +N K T
Sbjct: 241 DVKNNKATYV 250
>gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase
[Micromonospora sp. ATCC 39149]
gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase
[Micromonospora sp. ATCC 39149]
Length = 658
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/343 (17%), Positives = 117/343 (34%), Gaps = 35/343 (10%)
Query: 14 KVNFLILKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61
+V+ + + + + + +GGKRLRP
Sbjct: 315 RVDAELAAFLDRQAPDWPDGAPRGVFTALHRFVLAGGKRLRPQFCYWGWRGAGGEDGGED 374
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV-----GDFLLS 115
++ + A+E H L+HDD++D S RRG + ++ + + + +
Sbjct: 375 GSPILVASAALELFHAFALIHDDILDRSDRRRGAPSVHRLFADLHARSAWRGDPEAYGRN 434
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK--------- 166
A + + +V +YL ++
Sbjct: 435 TALLCGDLCAAWADQMFHECGLRRDELLRGYAVFALMRTEVIAGEYLDLVSGVGDGSVAS 494
Query: 167 -------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ L++ + +AG + AL +G LG AFQL DDVL G+
Sbjct: 495 ALTVIRLKAARYTVTRPLQIGAALAGGPPELAAALAEFGDPLGDAFQLRDDVLGVFGDPQ 554
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK+I +D R GKPT+ + LA Q + + + + ++ + + I+ A
Sbjct: 555 ITGKSILDDLREGKPTVMMALARQAADRAQIARLRELFGNPELDDDGAAELRAIIEATGA 614
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
+ E + +L P +++L + + R
Sbjct: 615 REEIERMIRVRAEAGLRALADAPLVPAAREALAGLAARTVIRT 657
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 10/236 (4%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ V + + + + + ++Y + GGKRLRP+L +A L + + ACA
Sbjct: 15 LDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACA 74
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD +D+ LRRGK + +G ++L GD + + AF ++ + E
Sbjct: 75 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALAFEILTPDEGVE 134
Query: 129 ALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
G + + E + + KT L ++++ +
Sbjct: 135 PALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ QAL YG +G+AFQ+VDD+LD +++GK G+D KPT
Sbjct: 195 ACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDKLGKTAGKDLEANKPTYV 250
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 74/325 (22%), Positives = 128/325 (39%), Gaps = 57/325 (17%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----- 64
+ + ++ + + + + + + ++Y + GGKR+R L A G
Sbjct: 17 QHIEAVLDECLPAADALPARLHEAMRYAVLGGGKRIRAALVYAAGQACPVNGSAVAIQAS 76
Query: 65 -VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A A+E IH +L+HDD +DD LRRG+ + + T++L GD L AF ++
Sbjct: 77 MDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELL 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ AL + A A G L S ++ ++ + KT + +
Sbjct: 137 ADMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQTMHSMKTGAMLAC 196
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ + +++G +S RQAL Y +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 197 SVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGKTPGKDAAGNKPT 256
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+L L D A A
Sbjct: 257 YVSLL--------------------------------------GLDDARALAEELRGAAH 278
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320
+L L D +L + D+ + R
Sbjct: 279 AALTPLGD--AGSTLARLADYIVLR 301
>gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
Length = 298
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 20/312 (6%)
Query: 12 MEKVNFLILKRICSDVEMIPDV-VK--YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E V I I + D + Y GKRLR L L A G + V A
Sbjct: 2 LEAVERQIEHYIND----LEDADARQLYSRLPAGKRLRARLILTIA----GSGLSAVKTA 53
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH A+LLHDDV+DD+ RRG+ + ++GN+TS++ GD L S+AF + ++
Sbjct: 54 AIVEMIHAASLLHDDVIDDAYTRRGRPSINALYGNKTSIMFGDVLYSKAF-YELVDIDRQ 112
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+++ L+ GE + + LS++ + + YL +I KTA L AA E ++++AG
Sbjct: 113 VARSIANAVVLLSLGERQDVLLSESFNPDRDAYLKMIYQKTAALIEAAAESAAILAGKDR 172
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
A ++YG NLGIAFQ++DD+LD +GK DF GK TLP I ++
Sbjct: 173 E---AYRTYGRNLGIAFQMIDDILDITQSAEALGKPAMHDFEEGKTTLPYIYLYE-ALDE 228
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ ++ EN + M AL A + ++A +R +
Sbjct: 229 PDRKRLLAMHRQPVTGENAEWIRERMARTGALERARDEAKALIEEAIALMRREGEPE--- 285
Query: 309 SLMEVVDFCLQR 320
L + ++R
Sbjct: 286 -LEALAMKMIER 296
>gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586]
gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586]
Length = 303
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 62/339 (18%), Positives = 120/339 (35%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++++ + I + + + + + GGKRLRP L T +
Sbjct: 1 MTDFLKQLAAHHQRIDAALNHFISTLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D+ A A+E IH +L+H +DD LRRG+ + +G ++L GD L +
Sbjct: 61 AVSPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + + L + G+ L+ + +
Sbjct: 121 LAFSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQTLERIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ ++ + L Y +G+AFQ+ DD+LD G+ GK
Sbjct: 181 HKTGALIRASVRLGALAAGERGRLALPYLDRYANAVGLAFQVQDDILDVIGDSATTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + GK T P ++ L +
Sbjct: 241 GADQQLGKSTYP----------------------------------ALL----GLEQAKQ 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKS----LMEVVDFCLQR 320
+A +++ +L L D+ + + L + ++ ++R
Sbjct: 263 KARELCKESLSALHELEDTLDRPAAIAPLRALANYVVER 301
>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 70/327 (21%), Positives = 126/327 (38%), Gaps = 58/327 (17%)
Query: 14 KVNFLIL------KRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
++ + + + S+ + +++ + +GGKRLRP+L L A +L + +
Sbjct: 15 RIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVLECAALLGRCDEGVL 74
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ACA+E IH +L+HDD+ +D+ LRRGK + T +L GD LL+ AF ++ +
Sbjct: 75 DVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILAGDALLTLAFDVIGQ 134
Query: 124 TKSQEALEALSLVACT--------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ ++ G +++ D TE + KT L
Sbjct: 135 EAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEIYKFHAMKTGALLRY 194
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A +++A N L +G +G++FQ+ DD+LD E+GK G+D GK T
Sbjct: 195 ACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVASPEELGKATGKDADAGKAT 254
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + + AK
Sbjct: 255 LVGLW--------------------------------------GVERSRKELDWLLADAK 276
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L + ++L + F R +
Sbjct: 277 ELLEPF--GATAETLNSIAAFIATRSS 301
>gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ V Q +G NLG+ FQ+VDD+LDY N +GK D + G T P++ A++
Sbjct: 344 AQDDVVQNCYDFGRNLGLCFQIVDDMLDYTSSDNAIGKPSQADLKLGLATAPILFAWKER 403
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + I+ +++ A + + + T A Y KA +LR LP+S
Sbjct: 404 PELGE-----LISRKFKEPGDVELARSAVDQCNGVEQTRKMAQEYCMKALGNLRVLPESD 458
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L + + L R
Sbjct: 459 ARSALELLTNSILTRT 474
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 21/56 (37%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L +M + I I S + V Y + GK +RP++ L + L
Sbjct: 48 SLVSHEMSNLAKSIASMIGSGHPTLNRVSSYYFEAEGKNVRPLIVLLLSKALSKIP 103
>gi|115928216|ref|XP_785706.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2 [Strongylocentrotus purpuratus]
gi|115934945|ref|XP_001190717.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2 [Strongylocentrotus purpuratus]
Length = 562
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/335 (17%), Positives = 110/335 (32%), Gaps = 38/335 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK---RLRPMLTLATALML-- 57
L L ++ V + K + + ++ +L GK + R ++ L +
Sbjct: 165 SLRCLLSDELANVALHMRKLVGAKHPLLKTAKNFLTD--GKHSLQTRGLIILLISKAATP 222
Query: 58 ---------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSV 107
+ LA E IHTA L+H VV+ L + GN+ +V
Sbjct: 223 IDSKQVPPSGGIYASQRALAEISEMIHTAFLVHRGVVNLLNLDPATGPINVMEMGNKMAV 282
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEED 160
L GDFLL+ A + ++ +E +S L E + + +T D
Sbjct: 283 LSGDFLLASACKALAGLRNTTVVELISKAIGHLTEAAFMRFGNADLSPIATIQPGLTFLD 342
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ + + L + + + ++ ++ +G N+ A QL ++ + +
Sbjct: 343 WERYVYLSSGTLIGHSCRGALELTNHSQALTESAYDFGKNIAWAQQLHTELQPFVSSSSP 402
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
G K ++KK +R++ AL
Sbjct: 403 RGDIDLTSAPVLLYLESGQGQRSEVNSSRKP--------------DIKKLMREIRQSPAL 448
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ +Y A L P S + +L +V
Sbjct: 449 DKAKSLCLNYSDTALQGLSAFPASDSRTALQNMVH 483
>gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus
vaginalis ATCC 51170]
gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus
vaginalis ATCC 51170]
Length = 333
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 146/316 (46%), Gaps = 5/316 (1%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62
++ L K + ++ ++ S + ++++ + S GK +R L + +LM E + D
Sbjct: 18 IDYLIDKTLVEMREILGDYKQSQ--KLYNIIENTLISSGKMIRTKLLIYISLMGENQISD 75
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A+E H A+L+HDD++DDS +RR + + +G +V GD+++S+ F +
Sbjct: 76 KIISQCAAVEITHLASLIHDDIIDDSLIRRSHRSIQSKYGKDVAVFAGDYMISKVFSYLA 135
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ E + +S + GE+ Q + LD++E++Y I KTA F +
Sbjct: 136 KKGLVEEISIISDTIRDMCNGEVGQNLIKYRLDISEKEYFENICGKTASFFKTVCYFGAK 195
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
AG + +G NLG+ FQL DD+LD +E GK D + G T P++ +
Sbjct: 196 NAGFNQIDINKMVEFGKNLGLMFQLKDDILDLFSSKDETGKGEFVDVKEGVYTYPLLSSM 255
Query: 243 QRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + N ++ + L ++ E++A + + + + K + L L
Sbjct: 256 NDDKYGDEIYKLLNKNKEVSLNYDELLTLRQLLIESKACILSSKKIKEFADKNRLILASL 315
Query: 302 PDSSWKKSLMEVVDFC 317
P L +++D
Sbjct: 316 PIRES-DYLYKILDKI 330
>gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_ANIW137N18]
Length = 273
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
ML R + + A A+E IH TL+HDD++D+ +R G + ++L GD L S
Sbjct: 1 MLGGRQSDAIAAASAVEMIHNFTLVHDDIMDNDEMRHGVPTTHKKFDMPLAILAGDVLYS 60
Query: 116 QAFCMVIETKSQEALEALS-------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+A+ + + T ++Y+ +I+ K
Sbjct: 61 KAYHTISSKSKLSSNYTTQLVSKLSKTCVEICEGQVGDIKFAENKRIPTGKEYIKMIEKK 120
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TAVLF + + ++ A + + L S+G NLGI FQ+ DD+L G+ K +G D
Sbjct: 121 TAVLFEVSCAMGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLLGIIGDSKITKKPVGND 180
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
R GK TLP+ILA ++ + K + K S + ++ A ++R +
Sbjct: 181 IREGKKTLPIILAIKKAKGKNKKIILRVFGNSKASKQQIRLAVNVIRSLGVEEEVGNMIL 240
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y Q+AK SL + K ++ ++DF ++R
Sbjct: 241 KYAQRAKKSLSSY-TGTAKNEIISLLDFVIKR 271
>gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
15897]
gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
15897]
Length = 284
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E+VN + + + S ++ + + Y + +GGKRLRP+L + T ++ +ACA
Sbjct: 7 IEEVNARLKEILSSYRPGLVKEAMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLDIACA 66
Query: 71 IEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--- 125
IE IHT +L+HDD+ LRRGK + T++L GD LL+++ ++I
Sbjct: 67 IEMIHTYSLIHDDLPGMDNDDLRRGKPTCHKQFDEATAILAGDALLNESMNVIIRMDLDD 126
Query: 126 --SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
E L L + +Q + D L I +
Sbjct: 127 ALKVEVLRYLYNASGLGGMIYGQQQDMYFETHTATLDELQAIHHDKTGALISVPM-KIAG 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L++ G LG+AFQ+ DD+LD +GK +G D N K T
Sbjct: 186 LIAKKEDADKLENIGFKLGLAFQIQDDILDVTSTTETLGKKVGSDIANHKSTYV 239
>gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58]
gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58]
Length = 259
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 120/298 (40%), Gaps = 50/298 (16%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91
++Y GGKRLRPML LA + + E + AIE IH +L+HDD+ LR
Sbjct: 1 MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL--------VACTLAEG 143
RGK + +G T++L GD L +QAF ++ A L++ + +A G
Sbjct: 61 RGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSRGMAGG 120
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L+ V + A++ +A L ++ + ++ L +Y LG+
Sbjct: 121 QAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGL 180
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ++DDVLD + +GK G+D N KPT ++
Sbjct: 181 AFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLM----------------------- 217
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L A+ +A L D + + L ++ +F + R
Sbjct: 218 ---------------GLEAARSYAHKLVAEAVALLEPFGDKALR--LRQLAEFAVARK 258
>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 134/334 (40%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L+ + + ++ + I + + + Y + +GGKR+RP+L LAT
Sbjct: 3 EQLKGFFNEYRKLIDARLPSYIEDLRAPDTLKQAMTYSLKAGGKRVRPLLLLATLDGFNR 62
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ LACAIE IHT +L+H +DD RRG+ V+G ++L GD LL+ +
Sbjct: 63 PIEDGFDLACAIEMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILAGDALLTYS 122
Query: 118 FCMVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ + A G +N +T ++ + K
Sbjct: 123 FELITSMSAVREEPAKALTLVRELAKASGPCGMVGGQVADIEGENRSLTVQELADIHHHK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + ++ +++A + L+ + + LG+ FQ+ DD+LD G+ +++GK +G D
Sbjct: 183 TGDLLAYSIIAGAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDKLGKPVGSD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T P +L L + +
Sbjct: 243 DGNNKSTYPSLL--------------------------------------GLDEAKKMLD 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ KAK+ L + + L+ + D+ R +
Sbjct: 265 VHTMKAKEHLEAVK--MDRTLLLALTDYVAGRDH 296
>gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 299
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 124/333 (37%), Gaps = 52/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L+ + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 4 MQQLQACVSQANQALSRFI-APLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVS 62
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 63 TATLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAF 122
Query: 119 CMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ + E + + + G+ L+ + +
Sbjct: 123 AIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGHQISLDALERIHRHKT 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 183 GALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGAD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ GK T P ++ L +A+
Sbjct: 243 QQLGKSTYP----------------------------------ALL----GLEQARNKAW 264
Query: 289 SYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ A+ SL L S +L + ++ +QR
Sbjct: 265 DLIEDARQSLHQLAAQSLDTSALEALANYIIQR 297
>gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
Length = 293
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 131/321 (40%), Gaps = 52/321 (16%)
Query: 14 KVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V+ + + + + + Y +F+GGKR+RPMLT A A + + A AI
Sbjct: 13 RVDDYLTLNLGQYEPATHLQNAMAYSLFNGGKRVRPMLTYAAASLFGEANNLTDASAAAI 72
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH +L+H +DD LRRGK + + T++L GD L + AF ++ K Q
Sbjct: 73 ESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQTFAFELLSNPKHQST 132
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L L+ + + + +D + ++ + + KT L A++ + ++
Sbjct: 133 KVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQHKTGALIRASIRMGAI 192
Query: 183 IAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
G + + AL +Y +G+AFQ+ DD++D + +GK D KPT P +L
Sbjct: 193 STGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSDTTTLGKTQFSDEEANKPTYPKLL- 251
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A + +A ++
Sbjct: 252 -------------------------------------GLAGAQVLAQNLHSQAITAISPF 274
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
D + L+E+ ++ + R +
Sbjct: 275 GD--AAQPLVELANYIIGRNH 293
>gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168]
gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168]
Length = 299
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 118/324 (36%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+ N + + I + + ++Y GGKRLRP L AT M A
Sbjct: 12 EQANQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGKMFGVSLSTLDAPAA 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG + +G ++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFTIISDAPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
E + + + G+ L A++ +A
Sbjct: 132 EVTDRDRIAMISELANASGIAGMCGGQALDLDAEGRQVPLAALEKIHRHKTGALIRAAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +V L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALSAGEKGRNVLPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L +A ++A+ S
Sbjct: 252 ----------------------------------ALL----GLEQARNKARDLIEEARQS 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L+ L S +L + D+ +QR
Sbjct: 274 LQQLAAQSLDTSALEALADYIIQR 297
>gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 275
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 13/279 (4%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + +
Sbjct: 8 GKKLRSKLLLAIAD----ESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEF 63
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G + ++++GD L S+AF + +S LA GEL + L + ++ +E Y
Sbjct: 64 GTKNALMLGDILYSKAF-YELSKMDARFTSIISDAVVKLAIGELMDVDLGEKFNINKEAY 122
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L +I +KTAVL A+ +++AG+ YG NLG+AFQ++DD+LD + + +
Sbjct: 123 LKMIYNKTAVLIEASARCGAILAGLYEK---DFAEYGKNLGLAFQMIDDILDIKSDEKIL 179
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK DF+ GK TLP I ++ ++++ + ++ ++ + E +AL
Sbjct: 180 GKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKK-DLNENEKEWLKTKFEEQKALE 238
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +Y +KA+ ++ ++ L +++ + R
Sbjct: 239 KAILEAKTYAKKARKAIEKYDNNK----LNDIIKAMIDR 273
>gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
Length = 308
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 74/327 (22%), Positives = 118/327 (36%), Gaps = 61/327 (18%)
Query: 17 FLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+L+++ SD + + D ++Y GGKRLRP L + ++ + + +L
Sbjct: 22 EALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLRPFLVVESSAVFGVAREAALLA 81
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E IH +L+HDD+ LRRG+ + T++L GD LL+ AF ++ +
Sbjct: 82 GAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAGDGLLTLAFDIITRDE 141
Query: 126 SQEALEALSLVACTLAEGELRQLS----------LSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ L+ LA + D D V + KT L
Sbjct: 142 VHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVDVARVQQMKTGALLRF 201
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+L+ QAL +YG LG AFQ+ DD+LD G+ +GK G D GK T
Sbjct: 202 GCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTT 261
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + R KA
Sbjct: 262 FVTQL--------------------------------------GIDGAKKRVRDLLAKAD 283
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++L + + L F R +
Sbjct: 284 EALSVF--GTRGEVLRAAAHFVADRKS 308
>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
Length = 293
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVAIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida tropicalis MYA-3404]
gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida tropicalis MYA-3404]
Length = 480
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ V + S+G NLG+ FQ+VDD+LDY +GK D + G T P++ A++
Sbjct: 349 AQDDVIENCYSFGRNLGLCFQIVDDMLDYTSSDKAIGKPSQADLKLGLATAPILYAWKEE 408
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ I +++ A + + + T A Y +A +LRCLPDS
Sbjct: 409 PALGE-----LIGRKFSQPGDVEIARRAVDKYNGVEKTREMATMYCHEALKNLRCLPDSE 463
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L + + L R
Sbjct: 464 ARSALELLTNSVLTRS 479
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +M + I I S ++ V Y + GK +RP++ L + L
Sbjct: 52 SIVSHEMSNLAKSIASLIGSGHPVLNRVSSYYFEAEGKNVRPLIVLILSKALSKIP 107
>gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
PeCan4]
gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
PeCan4]
Length = 307
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 129/326 (39%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++ + + + S + K LR L LA +L +
Sbjct: 6 LKTIQNKIASWIKGIESAFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L ++ + E+ S S E + ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEELNQHEQGLLVSYFKQD--SDEITEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
Length = 299
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + + Y GGKRLRP L AT M A A+E
Sbjct: 15 NDALRRFIAPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVS 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L + G+ L E+ A++ +A +
Sbjct: 135 DRYRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L + +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQAQRKARDLIEDARQSLSQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + D+ +QR
Sbjct: 277 LAAQSLDTSALEALADYIIQR 297
>gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/333 (21%), Positives = 125/333 (37%), Gaps = 55/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + ++ + + + + ++Y + +GGKRLRP+L LA A +
Sbjct: 2 DLKTYLSERKTLIDQALECYLPPGNGPGQRVVEAMRYSLLAGGKRLRPILCLAAAEAVAG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +A A+E IHT +L+HDD+ RRG+ + T++L GD LL+ A
Sbjct: 62 NVEQVMPVAGALEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKKFDEATAILAGDGLLTAA 121
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + +A G L++ T E + +
Sbjct: 122 FEVLAAAATNHPAQASVYHEVVQTIARAAGYQGMVGGQMADLLAEGQPSTLEQVEAIHRL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +A++ +L+ G AL YG G+ FQ+ DD+LD GE EMGK G
Sbjct: 182 KTGALLTASVRSGALLGGGSARDILALTHYGEKFGLIFQITDDLLDVEGESAEMGKPTGM 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ + + +A
Sbjct: 242 DAIRQKATYPAVM--------------------------------------GVAAAKNQA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A L+ + L ++ + L R
Sbjct: 264 RDLVAAALVDLQPF--GERAEPLRQLARYLLVR 294
>gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
Length = 290
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 63/330 (19%), Positives = 116/330 (35%), Gaps = 54/330 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML+ + E + +++ E + + + Y + +GGKRLRP+L A +
Sbjct: 1 MLKIYLKEKREIFEKYLQEKMTELKYPERLAESMIYSVMNGGKRLRPVLMYMIADIFNQD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LVGD 111
A A+E IH+ +L+HDD+ + +
Sbjct: 61 YSRIEDTAAALECIHSYSLVHDDLPAMDDDTYRRGKLTTHKKFDEATAILAGDALLTYAF 120
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+++S + + K G S+N +++ + ++ KT
Sbjct: 121 YVISASEKIENSGKVNIIRILSDYSGINGMVGGQYVDMESENKEISFDTLKYIHSHKTGK 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L AA+E+ ++ ++ L Y +GIAFQ+ DD+LD G+ + GK D +N
Sbjct: 181 LLKAAVELPLEALAIEGKQKEVLLEYSELIGIAFQIKDDLLDIEGDFEKTGKE-SSDEKN 239
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P + L T+ Y
Sbjct: 240 NKTTYPKLF--------------------------------------GLEKTKEILNDYT 261
Query: 292 QKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+KAK + ++ L+E+ D+ R
Sbjct: 262 EKAKQLIRENFENAE---ILVELADYISNR 288
>gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32]
Length = 307
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ + ++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIREIESGFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933]
gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024]
gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966]
gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli O157:H7 str. EDL933]
gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli]
gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli]
gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli]
gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli]
gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli]
gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
Length = 299
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSIDTSALEALADYIIQR 297
>gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
Length = 288
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 141/322 (43%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ +N + K I S + + +KY + +GGKR+RP++ L T ML + A
Sbjct: 5 INIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSAL 64
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++AF +V +
Sbjct: 65 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTI 124
Query: 128 EALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E +S++ + S+ + E + ++KT L + ++ +
Sbjct: 125 EDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA V+ ++ + L + +LG+ FQ+ DD+LD G+ +++GK +G D N K T
Sbjct: 185 VDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + A E + ++ A + L
Sbjct: 241 ------------------------------VSLLGKEGA----EEKLNNHQYLAMNCLNQ 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ D L ++VD R +
Sbjct: 267 ISDQYDTSELSDIVDLFYNRDH 288
>gi|154152177|ref|NP_001093855.1| decaprenyl-diphosphate synthase subunit 2 [Bos taurus]
gi|151554491|gb|AAI50064.1| PDSS2 protein [Bos taurus]
gi|296484143|gb|DAA26258.1| prenyl diphosphate synthase, subunit 2 [Bos taurus]
Length = 395
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/346 (16%), Positives = 123/346 (35%), Gaps = 39/346 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKR-----LRPMLTLATALML 57
L L ++ + + K + + ++ V + LI R LR ++ L +
Sbjct: 63 SLRCLLSDELCNIAMQVRKLVGTQHPLLTTV-RGLIHD---RQNNLQLRGLVVLLISKAA 118
Query: 58 EYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVW 101
N LA E IHTA L+H +V+ + L+ + +
Sbjct: 119 GPNSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQF 178
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLDV 156
GN+ ++L GDFLL+ A + ++ + +E L+ L +G + D+
Sbjct: 179 GNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYYENSTLAKENRITDDI 238
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ L + + + + +A V+ YG ++ ++ ++ D+L +
Sbjct: 239 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPFIK 298
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
E + V+ G + G++ + K ++
Sbjct: 299 EKTGDSLTFNLNSA-----PVVLHQEFLGRDLWIKQIREAQEKGRL---DYAKLRETIKA 350
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + +G KA ++L P S + +L +V F + R +
Sbjct: 351 GKGVTSAIDLCRYHGNKALEALESFPPSEARTALENIV-FAMTRFS 395
>gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
[Monodelphis domestica]
Length = 299
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 116/306 (37%), Gaps = 15/306 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
ME+V + ++ + +YL+ GK++R L+ A L+ D ++
Sbjct: 1 MEEVQK-------TSERILLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVT 53
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H A+LL DD+ D+S LRRG A ++G + + +++ V+ +A++
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVK 113
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ L +G+ + N E+ + + + ++ +
Sbjct: 114 LFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQL---FSNYK 170
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ LK LG+ FQ+ DD + + K+ ED GK + P I A +
Sbjct: 171 EDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--T 228
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ + +++ K + + T +A + L + L+
Sbjct: 229 QVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLRELEAEAYKQIEALGGNPE---LV 285
Query: 312 EVVDFC 317
++ +
Sbjct: 286 ALIKYL 291
>gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 326
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-- 57
M+E L + +E+V LI + V+ ++ GK LR L L A +
Sbjct: 1 MIEILLKEWIERVKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMLRSKLLLLCAFLGTN 59
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLIAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F EA+ LS + GE+ Q +++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQENISEKKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + AG + Q L+ + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKEAGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQNYIIQFGGIEASYEKIKYLSNINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSKITVYLEKILN 320
>gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 346
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 81/327 (24%), Positives = 128/327 (39%), Gaps = 23/327 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI----FSG-------GKRLRPMLTLATALMLEYRG 61
V+ + + + V Y G GK +RP LTL TA +
Sbjct: 22 ALVDPALRAVVDGLPGPLRRVCGYHFGWWDERGRATAADPGKAIRPALTLLTARAVGGSA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V +A A+E +H +LLHDDV+D RR + A V+G ++L GD LL+ A ++
Sbjct: 82 EAAVPVAVAVELVHNFSLLHDDVMDADLTRRHRPTAWSVFGISQAILAGDALLAVANRLL 141
Query: 122 IETKSQEALE---ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + L G+ + + DV+ + L + KT L A
Sbjct: 142 AQEPAPVCDRGAEWIGTCCVELCAGQWSDMDFEQRADVSVSEVLAMAAGKTGALLGCACA 201
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L G + L ++G LG+AFQ VDD+L G+ GK + D GK +LPV
Sbjct: 202 LGALAGGGTPAAAGRLDAFGRKLGLAFQYVDDLLGIWGDPAVTGKPVFADLERGKKSLPV 261
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A GT D L+ ++ A +A + A L
Sbjct: 262 VAALTSGTAAGARLAALYHADRPRGETELRSLAELIEAAGARTWACGQAAAALSDAVGIL 321
Query: 299 -----RCLPDSSWKKSLMEVVDFCLQR 320
LP + L+ V + R
Sbjct: 322 QTEIADPLPAAE----LLHVANLIAGR 344
>gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
10507]
gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
10507]
Length = 295
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 63/323 (19%), Positives = 127/323 (39%), Gaps = 54/323 (16%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++ LI + + + + + Y + +GGKRLRP++ M
Sbjct: 12 QEIEQLIRRYLPKEEGFASTLARAMNYSMLAGGKRLRPLMMQEVYRMFGGTQRVIEPFMV 71
Query: 70 AIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ D+ RRG+ V+G V+ G LL+ A+ + +
Sbjct: 72 AMEMIHTHSLIHDDLPALDNDEYRRGRETTWKVFGEDMGVISGAALLNYAYEVALSGFEL 131
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH---------VIKSKTAVLFSAALE 178
++A + + + V E+ + ++KT+ L A++
Sbjct: 132 TDRTERVVLALRVLAAKTGMYGMLGGQSVDVENDRKPLDLQLLDYIYENKTSALMEASMM 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V +++AG +N+ + ++ +G+AFQ+ DD+LD E+GK I D +N K T
Sbjct: 192 VGAILAGAENTKIRQVEKAAGCVGLAFQIEDDILDVTSTQEELGKPIHSDEKNHKTTYVT 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + + + Q+A ++
Sbjct: 252 L--------------------------------------KGIENAQREVERLSQEAIETF 273
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
L + + + L ++ + R
Sbjct: 274 DGLEEKN--EFLRTLIQELVNRK 294
>gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 330
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD- 62
L ++ V + + S+V + +Y G GKRLRP + L A L
Sbjct: 79 SLVADELSLVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIHE 138
Query: 63 ----------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+A E IH A+LLHDDV+DD+ RRG + V GN+ +
Sbjct: 139 PMPNGVGDTLGAELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVA 198
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL GDFLLS+A + K+ E + L+ V L GE Q++ + + + Y+
Sbjct: 199 VLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMDHYMQKTY 258
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L S + + +L+AG V YG +LG+AFQL+DDVLD+ G +GK
Sbjct: 259 YKTASLISDSCKAIALLAGQTTEVAMLAFEYGKSLGLAFQLIDDVLDFTGTSASLGKGSL 318
Query: 227 EDFRN 231
D R+
Sbjct: 319 SDIRH 323
>gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi]
gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi]
Length = 306
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 64/290 (22%), Positives = 109/290 (37%), Gaps = 5/290 (1%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ DV + +Y++ GK+LR L A L+ + + +E +H A+L+ D
Sbjct: 1 MADDVAQLLAPYQYILKLPGKQLRSQLAKAFNFWLQVDVEVLDSIMTVVEMLHNASLMID 60
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ D S LRRG ++G ++ +++ A I EA+E + L
Sbjct: 61 DIEDSSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLELHR 120
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ ++L + E+ + + A + G + KS NL
Sbjct: 121 GQGKELYWRDIVQCPTEEEYEQMAMQKTGGLFALTVQLMELFGKKQY---DFKSLIKNLA 177
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
I FQ+ DD ++ K ED GK + P+I+A K + + +
Sbjct: 178 IYFQIRDDYINLCSRTYAEQKTFAEDLTEGKFSFPIIVAVD--KKYNDDEIINILRQRPK 235
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
VE K I+ E A T R + L + K L+E
Sbjct: 236 DVEVKKYCIRIIEERGAFGYTLKRLQELHDLLISHIDMLGGNKELKILIE 285
>gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
11551]
gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
11551]
Length = 280
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 44/318 (13%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + + V+ + I + D + D + ++ +GGKR+RP +T+ + D
Sbjct: 2 EYLERRVSMVDDRLEAVIDAVDPPELSDELAHVALAGGKRVRPAVTILSCEACGGDADAA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V A AIE +H A+L+ DD++D S +RRG +A +G S++ D LL +AF ++
Sbjct: 62 VDFAVAIELVHNASLVIDDIIDRSDIRRGTPSAWAEYGYGPSIIASDGLLGEAFALLS-- 119
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A+ +VA ++ E + + E +Y+ + + KT LF AA E+ ++ A
Sbjct: 120 ---VDDHAMQIVAESMVELGEGEATELVARPTNEAEYMELARRKTGALFRAAAELGAVAA 176
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+A Y +G+AFQ+ DDVLD + +E+GK G+D + +P++ +
Sbjct: 177 DADPFTVEAFGEYAERVGVAFQIRDDVLDATADADELGKPTGQDEQMDRPSVVQVTDLTP 236
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLP 302
+ RA KA D+L L
Sbjct: 237 V------------------------------------EANQRAREQSDKALDALDTAKLS 260
Query: 303 DSSWKKSLMEVVDFCLQR 320
++ L ++ +F + R
Sbjct: 261 ETDSLGYLRDLAEFVVVR 278
>gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 360
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 24/316 (7%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + ++ + GGKRLRP D V A+EF+ + L+HDD++D
Sbjct: 43 PVAEAIEAFVLGGGKRLRPAFAYWGFRGAGGADADQVVTALAALEFVQASALIHDDLMDR 102
Query: 88 SALRRGKVAARLVWGNQT----------------SVLVGDFLLSQAFCMVI-----ETKS 126
S RRG+ A + + ++L+GD L + ++
Sbjct: 103 SDTRRGEPAVHRRFAARHRGAGWGGDADGFGDAAAILLGDLCLVWSDELLHSAGLDPRVV 162
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAG 185
A + + G+ + D + E V + K+A L + + +A
Sbjct: 163 ARARPVFDEMRTEVTVGQYLDVLTQATGDTSVERAGKVARYKSAKYTVERPLLLGAALAD 222
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
VR A +YG+ LG AFQL DDVL G+ + GK G+D R GK T V A +
Sbjct: 223 APAHVRAAYSAYGLPLGEAFQLRDDVLGVFGDPAQTGKPAGDDLREGKRTYLVAAAVEAS 282
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
+ + D ++ + + + ++ AL TE R + + A +L + ++
Sbjct: 283 DDAGRALLLDRLGDPELDADGVARLRELITSTGALARTEERIAALTETALAALAAVDLET 342
Query: 305 SWKKSLMEVVDFCLQR 320
+++L+++ +R
Sbjct: 343 EARQALVDLAIAATRR 358
>gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SouthAfrica7]
Length = 307
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L+
Sbjct: 6 LKAIQNRIASWIKEIESGFIDTLFSKI------------GPSKMLRSKLMLA---LLDET 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQILSNAVLRLSRGEIEDMFVGECFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G++ G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDATTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y KA
Sbjct: 227 LPYLLLYEKLNENEQGLLISYFKQD--SDEIIEWTKEKFKQYAIIEETLKIAQVYSNKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+S++ L ++ + R
Sbjct: 285 ESIK----GENNLILEKLAQDVIYRT 306
>gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8]
gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8]
Length = 297
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 126/331 (38%), Gaps = 56/331 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGD 62
L +KV+ +LK + E+ + + ++Y + +GGKRLRPML L M D
Sbjct: 8 LMKAYADKVDEQLLKFTENKPELQGVVLEAMEYSLTAGGKRLRPMLMLEFYRMCGGEDLD 67
Query: 63 NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LAC++E IHT +L+H +DD RRGK + + ++L GD L + AF +
Sbjct: 68 KMLKLACSVELIHTYSLIHDDLPCMDDDDYRRGKPSCHKAFPENIALLAGDALNTLAFEV 127
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAA--- 176
+ E + + A V + + + + I +T +
Sbjct: 128 ISECAMEGTISADKAVMLISVLSKAIGTDGMIGGQVIDLQTENEEISIETLNTLQSCKTG 187
Query: 177 -----LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
V +IA + + A Y +G AFQ+VDD+LD G E+GK IG D
Sbjct: 188 ALIEAACVMGVIAAGRLDLIPAAADYAQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQ 247
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T +L L ++ A
Sbjct: 248 HKNTYVSLL--------------------------------------GLERSKQVASQLT 269
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++ +S + + E+ L R +
Sbjct: 270 VQALAHIKKFDNSEF---MYELTQELLDRRS 297
>gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 298
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 20/309 (6%)
Query: 12 MEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+EKV L+++ + S VE++ V GKRLR L L A + +
Sbjct: 2 LEKVENLMVEMVASLGDVRSVELLHRV------PKGKRLRAKLILKIA----GVSEASLK 51
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +E IH A+LLHDDV+DD+ RRG+ + ++GN+T++++GD L S+ F +
Sbjct: 52 LAAIVELIHAASLLHDDVIDDAFTRRGESSINALFGNKTAIMLGDILYSKGFS-ELTHMP 110
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
QE +S L+ GEL + LS + +E Y +I KTA + A +
Sbjct: 111 QEVAFTISNAVALLSVGELLDVDLSHGFNESETLYFDMIYKKTAS---LIEASAKAAALL 167
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
YG NLG+AFQ++DD+LD +GK DF+ GK TLP + + + T
Sbjct: 168 SGKNGDIYALYGKNLGLAFQIIDDILDITQSSEVLGKPSLNDFKEGKTTLPYLYMYHKLT 227
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
++ + S +++ E M E AL+D A + G +A D+++ D
Sbjct: 228 PEDQTYLCSLF-QVELTDEQSAWIKAKMHETDALMDAIAYAKALGLEALDAIKDEDDVGL 286
Query: 307 KKSLMEVVD 315
+ E+++
Sbjct: 287 SSIMKEMIE 295
>gi|90903996|gb|ABE02389.1| hypothetical protein [Siniperca chuatsi]
Length = 384
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 115/344 (33%), Gaps = 39/344 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ + + +R ++ L +
Sbjct: 52 SLRCLLSDELSNVAMHVRKLVGTQHPLLNTARGFVYDSRNNLQ-----MRGLIVLLLSKA 106
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALR-RGKVAARLV 100
+ LA E IHTA L+H +V+ +
Sbjct: 107 AGPSHVASDLLTQDMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTVSDGPLKDMQ 166
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD----- 155
+GN+ +VL GDFLL+ A + + + + +E +S L +G + S S +
Sbjct: 167 FGNKMAVLSGDFLLANACTGLAQLNNTKVVELISSAIGDLVQGIYCENSSSTEENGLTDG 226
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
V + L + + + + +A ++ YG +L + +L D+ +
Sbjct: 227 VDVATWEEQAFLSHGALLAKSCQAAMELAKHDKESQRLAYKYGKHLSLGHKLNSDLQPFV 286
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ ++ ++ +E+ + + + K ++
Sbjct: 287 KSSVGEPVSFSLSAAP-------VVFHRQIVGQERWHQQLQEVKTLRNQLDYSKLLAAVK 339
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ + +G KA ++++ P S + +L + +
Sbjct: 340 SEKGVSSAVDLCCYHGNKALEAIQAFPSSEARSALENIASAITK 383
>gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638]
gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638]
Length = 299
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 72/324 (22%), Positives = 118/324 (36%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+ N + + I + + Y GGKRLRP L AT M + A
Sbjct: 12 ERANDALRRFIEPQPFQNTPLVAAMHYGALLGGKRLRPFLVYATGNMFGISSNTLDAPAA 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMI 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
E + L + G+ L + E+ A++ +A
Sbjct: 132 EVADRDRLAMVSELAMASGVAGMCGGQALDLEAEGHQVNLEQLERIHRHKTGALIRAAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALSAGERGSKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A A+ S
Sbjct: 252 ----------------------------------ALL----GLEQAQQKARDLIDDARQS 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + D+ +QR
Sbjct: 274 LNALAAQSLDTSALEALADYIIQR 297
>gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
Length = 429
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-------- 59
M +++ + +++ + I D+ Y I + GKR+RP L +
Sbjct: 89 LKPRMARLDAFLREQLVAFEPEIRDMADYCIDTSGKRIRPALVFLAGWAGDDECGGGGGG 148
Query: 60 ------------------RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
D V A +E +H ATL+HDD++D++ +RR + A +
Sbjct: 149 GRIDDDIGALLRSSDSAFPDDPLVRAAAVVELVHLATLVHDDIMDEADVRRNRPTAARKY 208
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G++ +VL+GD LL+ A + + + E A+S + GE+ Q D++ DY
Sbjct: 209 GSEAAVLLGDALLAHAVYLASQFPTTEVCAAVSQSTRKVCAGEIVQTLRRGTTDISRADY 268
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
VI KTA LF + + + + A ++G +LGIA+Q+ DD+ D+ GE N +
Sbjct: 269 DRVIDLKTAELFRVSCHLGARL-SGHPDFAPAASTFGRHLGIAYQIYDDLADFFGEENRI 327
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK +G D +GK TLP++ ++ ++ G+ S + + M+E+
Sbjct: 328 GKTLGTDLASGKITLPLLFLSEKL-PSDERMVLDAEITGQRSPDLSARLRQ-MKEHGIFE 385
Query: 282 DTEYRAYSYGQKAKDSL---RCLPDSSWKKSLMEVVD 315
A+ +L LP + L+E+ D
Sbjct: 386 QVAAALAVETAAARAALTPHAGLPATPH---LLELCD 419
>gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
Length = 300
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 65/336 (19%), Positives = 114/336 (33%), Gaps = 54/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++V+ + + + + + +++ GGKRLRP L T +
Sbjct: 1 MTDFARALENSRQQVDAALERYLSVLANPQAPLIQAMRHGALLGGKRLRPFLVYQTGRLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A AIE IH +L+HDD+ LRRG + +G T++L GD L +
Sbjct: 61 GLTAASLDAPAAAIECIHAYSLIHDDLPAMDNDALRRGLPTCHVKFGETTAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + + + L + + G+ L
Sbjct: 121 LAFSILADVEMPKVSPQDRLQMISALAAASGADGMCLGQALDLEAEGQQVSAARLETIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ SA + L + +G+AFQ+ DD+LD G+ GK
Sbjct: 181 HKTGALIRSAVRMGVLAAGERGGPALRYLDRFAAAIGLAFQVQDDILDVVGDSQTTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D GK T P ++ L
Sbjct: 241 GADQALGKSTYP----------------------------------ALL----GLDMARA 262
Query: 286 RAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQR 320
+A ++ SL C+ +LM + + ++R
Sbjct: 263 KAQDLYHESLASLECVAALGYDTATLMALARYIIER 298
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M L E + + V + + I + + Y + +GGKR+RP+L L+T
Sbjct: 1 MAQLSVEQFLNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLL 114
L + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL
Sbjct: 61 LGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTL---------AEGELRQLSLSKNLDVTEEDYLHVI 165
+ AF +++E + ++ L + +T + ++
Sbjct: 121 TYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT + ++ +LI G + L + +LG+AFQ+ DD+LD G ++GK +
Sbjct: 181 RHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPV 240
Query: 226 GEDFRNGKPTLP 237
G D N K T P
Sbjct: 241 GSDQSNNKATYP 252
>gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62]
gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62]
Length = 281
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 118/323 (36%), Gaps = 45/323 (13%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + + ++ I + + D +I + + + + GGK R L L + +
Sbjct: 1 MTVFKTAMADAASRIEARIDQVLTPDDPLI-EPMGHAL-RGGKMFRAFLVLEGSRLHGVD 58
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE IH +L+H +DD LRRG+ W T+VLVGD L S AF
Sbjct: 59 EAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEATAVLVGDNLQSLAF 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ A+ V L ++ T +I+ + +
Sbjct: 119 QLITGPGLGGAIAQRLAVDARTMVKGQM-LDIAAETAATPLTLDQIIELQQHKTGALIKW 177
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + + Y LG+AFQ+ DD+LD G+V +GK +G+D GK T
Sbjct: 178 AAVAGPLMAGADIGPMSRYADALGLAFQIADDLLDVEGDVATVGKAVGKDNNAGKATFVS 237
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L L + + RA Q+A+D+L
Sbjct: 238 LL--------------------------------------GLDEAKRRATDLVQEAQDTL 259
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ L E F + R
Sbjct: 260 NEY--GTEADVLREAAAFVVSRK 280
>gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
Length = 307
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K +++ ++++ + + S + K LR L LA +L +
Sbjct: 6 LKAIQNKIASWIKEIESSFIDELFSKI------------GPSKMLRSKLMLA---LLNEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ ++ + ++ + + +
Sbjct: 111 KAF----FELSKMGELIAKALSNAVLRLSRGEIEDVFVGECFNSNKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + + + +G+N G+AFQ+VDD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLDKDAKIYADFGLNFGMAFQIVDDLLDIIQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 325
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 73/350 (20%), Positives = 127/350 (36%), Gaps = 84/350 (24%)
Query: 15 VNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------- 63
V I + + + + + ++Y + +GGKRLRP+L LA+A + G +
Sbjct: 14 VEEGIERHLPPAATRPGRLHEAMRYSLQAGGKRLRPVLLLASAELCGGSGHSPSLQQSAT 73
Query: 64 ---------------HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTS 106
+ A AIE +HT +L+H +DD LRRG+ A + T+
Sbjct: 74 PEPPAGRRGDLVTALALPAAVAIECLHTYSLIHDDLPCMDDDDLRRGRPTAHKAFDEATA 133
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEAL----------------SLVACTLAEGELRQLSL 150
+L GD LL+ AF ++ E + + A+ L + +
Sbjct: 134 LLAGDALLTHAFALLAENYASQPALAMALIRELADAAGSRRLIGGQMEDLLAEKKADATA 193
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ + +I++ + L + G AL++ G +LG+AFQ++DD
Sbjct: 194 EELEFIHLNKTAAMIEASLVMGGWIGLHAQTAAPGALPPEITALRAAGRHLGLAFQIIDD 253
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
VLD + +GK G+D R GK T +
Sbjct: 254 VLDATADRATLGKTPGKDARAGKTTFVSLH------------------------------ 283
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + A + A+ +L L L ++D + R
Sbjct: 284 --------GLDRSRQFAREHTAAARQALASLEREHA--FLDALIDSLVTR 323
>gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
Length = 307
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/332 (18%), Positives = 116/332 (34%), Gaps = 52/332 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+ LT ++ + + S + ++Y SGGKR+RP+L A +
Sbjct: 16 ALDQLTETAKARLEQALDHYLPAQSAASRLSQAMRYAALSGGKRIRPLLVYGAAQLAGAS 75
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+H +DD LRRG+ + T++L GD L ++AF
Sbjct: 76 AAQADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQATCHKAFDEATAILAGDTLHTRAF 135
Query: 119 CMVIETKSQE--------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
++ + +A G+++ +
Sbjct: 136 ELLACHGDYRSDSRIALIQHLCQAAGVDGMAAGQMQDMLAQGQQQTVAALEEMHYLKTGR 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ ++ ++ L +G +G+AFQ+ DD+LD ++GK G D +
Sbjct: 196 LITASLQLGYFAAENDDPALLSNLTDFGDAIGLAFQIQDDILDITAATEQLGKPSGSDEK 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P +L L ++ RA
Sbjct: 256 LQKSTFPSLL--------------------------------------GLEQSQQRARQL 277
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L ++ + + R +
Sbjct: 278 CDQAQQALAGY--GPRALPLQQLAQYIITRNH 307
>gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
Length = 295
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M++V I + I D + + + + GGKRLR L L A + LLA
Sbjct: 1 MQRVEAQIKRLIDECDYDEVTRL--FATLQGGKRLRAKLILKIA----PEHKDAPLLAAI 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+DD+ RRG+ + G++T+V++GD L S+AF ++
Sbjct: 55 VELIHAASLLHDDVIDDAMTRRGEASVNATDGSKTAVMLGDILYSKAFTELVAFD----K 110
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +A ++ ++ + D + + + A +
Sbjct: 111 KVAQTIASSVTALSKGEMMDVEMAQNFNADEERYLDMLYLKTATLIEAAAKASALLAGKD 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
YG NLG++FQ++DD+LD + +GK D+ GK TLP I +++ E+
Sbjct: 171 ADKHALYGRNLGLSFQIIDDILDITADEATLGKPAMNDYVEGKCTLPYIYLYEKLDDIER 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ E L M+E++ + + A +AK ++ D L
Sbjct: 231 EKLVALHAKKPA-PEELLWMQEKMQEHKTIEKSFKLAKQLSDEAKQAMSEDED------L 283
Query: 311 MEVVDFCLQRL 321
+ ++D ++R
Sbjct: 284 VNILDTMIKRS 294
>gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905]
Length = 299
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPATAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ ++ E + + + G+ L +
Sbjct: 124 ILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 68/325 (20%), Positives = 122/325 (37%), Gaps = 54/325 (16%)
Query: 11 DMEK-VNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
D+++ V + + + + D ++Y GGKR+RP+L A + +
Sbjct: 12 DIQQHVETALAASLPAGTHAATPLFDAMRYAALDGGKRVRPLLVFAAGDVSGATPEALSA 71
Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
ACA+E IH +L+HDD+ LRRGK + G ++L GD L + AF ++
Sbjct: 72 AACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAFELLAIP 131
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAA 176
+ LA + + + ++ KT L AA
Sbjct: 132 LPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTGALIQAA 191
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +L + AL Y +G+AFQ++DDVLD + +GK G+D + KPT
Sbjct: 192 VRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSATLGKTAGKDAAHDKPTY 251
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
++ L + A++ A +
Sbjct: 252 VSLM--------------------------------------GLGEARSYAHALLADAHE 273
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
+L + + L ++ D+ + R
Sbjct: 274 ALALFGARARR--LQQLADYIVARS 296
>gi|221135480|ref|ZP_03561783.1| trans-hexaprenyltranstransferase [Glaciecola sp. HTCC2999]
Length = 115
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
DY + NEMGKN+G+D GKPTLP++ A + + I DG +E+L
Sbjct: 7 DYTADANEMGKNVGDDLAEGKPTLPLLHAMWHSDTQTSELIANAITDGD-GLEHLPTILT 65
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
M+ ++ T+ +A Q+A D+L +P+S +K +L+ + ++R+
Sbjct: 66 AMKNVGSIEYTQEKAQLEAQRAIDALSAIPESQYKDALIGLAHLSVERV 114
>gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti]
gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti]
Length = 249
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 5/253 (1%)
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IHTA+L+HDDV+D S RRGK + ++W ++ GD++L+ A ++ K E
Sbjct: 1 MISEMIHTASLVHDDVIDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDE 60
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
LS V L +GE QL + + Y KTA L + +L+ ++++G
Sbjct: 61 VTHILSQVLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADE 120
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + YG NLG+AFQ VDD+LD+ MGK D + G T PV+ A ++ +
Sbjct: 121 QMVELSFQYGRNLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPEL 180
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++++A+ ++ +++ L T + A + +A + +S ++K
Sbjct: 181 NPMIL-----RRFREPGDVERAYELVHQSQGLEQTRFLARKHCIEALRLASQISESPYQK 235
Query: 309 SLMEVVDFCLQRL 321
L+ V DF L R+
Sbjct: 236 GLIVVGDFVLNRM 248
>gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
Length = 303
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 69/329 (20%), Positives = 114/329 (34%), Gaps = 61/329 (18%)
Query: 12 MEKV----NFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+E+V N + + S + +V++Y GKRLR L LAT + + +
Sbjct: 14 LEEVVKFSNRHLEEIFSSLHDVPPKLLEVMRYATLGPGKRLRAALVLATYEVFQTTSPDS 73
Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ C+IE IH +L+HDD+ + ++ + Q
Sbjct: 74 YDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAMALLAADALQPLS 133
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAV 171
S + L L + + E + KT
Sbjct: 134 YEHLLGSHIDSKLLVSSTKELLRATGATGMVGGQVIDILNISNHMDLEALKDMHSRKTGA 193
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A +EV S++ + + LK Y +GIA+Q+VDD+LD + + +GK G+D +N
Sbjct: 194 LIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDATQDSDTLGKTAGKDQQN 253
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
KPT IL L + A S
Sbjct: 254 NKPTYVTIL--------------------------------------GLDEARNLAKSLY 275
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A SL +P+S L E+ + + R
Sbjct: 276 ENALKSLESVPNS---NRLKELAHYIIMR 301
>gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74]
gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74]
Length = 390
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 79/318 (24%), Positives = 122/318 (38%), Gaps = 24/318 (7%)
Query: 28 EMIPDV----VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ V++L+ +G +R RP L A +L +++ L AIE HT +L+ DD
Sbjct: 71 PRLHAALAVPVRHLVDAGRRRWRPGLVAAAIDLLGGDSEHYGPLCAAIELAHTGSLMVDD 130
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-------------- 129
V D S LRRG AA LV+G T++ G V T + +
Sbjct: 131 VQDGSPLRRGSPAAHLVFGTATALNAGTHAYFAFDRAVRLTAAHDPALAGRLRDVFLAAL 190
Query: 130 --LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A + T E+ + + + + KT + + E ++L+
Sbjct: 191 RSAHAGQGLDITGHRAEMAEAVATGDARHVLALVRLTHRLKTGAMAALGCETAALVTAAD 250
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG--EDFRNGKPTLPVILAFQRG 245
R+AL ++G LG A+Q DDV D RG +E G ED R+ K TLP+ A
Sbjct: 251 GPRRRALAAFGEALGTAYQFTDDVADPRGVRHEDGATKQEGEDTRDNKVTLPLAHAVALL 310
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDS 304
T+ + + + E A A A D+L LPDS
Sbjct: 311 PGPRMRALWDTLCAPEAGERERAEVRATLLECGAAERCVREAGELLSAAWDALAPVLPDS 370
Query: 305 SWKKSLMEVV-DFCLQRL 321
+ L ++ L R
Sbjct: 371 PRTRVLRDLAWHTVLGRS 388
>gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
Length = 306
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 5/290 (1%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ DV + +Y++ GK+LR L A L+ + + +E +H A+L+ D
Sbjct: 1 MADDVTQLLAPYQYILKLPGKQLRSQLAKAFNSWLQVDVEVLDSIMTVVEMLHNASLMID 60
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ D S LRRG ++G ++ +++ A I EA++ + L
Sbjct: 61 DIEDSSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLELHR 120
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ ++L + E+ + + A + G + KS NL
Sbjct: 121 GQGKELYWRDTVQCPTEEEYEQMAMQKTGGLFALTIQLMELFGKKQY---DFKSLIRNLA 177
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+ FQ+ DD ++ K ED GK + P+I+A K + + +
Sbjct: 178 VYFQIRDDYINLCSHAYAEQKTFAEDLTEGKFSFPIIVAID--KKYNDDEIINILRQRPK 235
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
VE K I+ E A T R + L + K+L+E
Sbjct: 236 DVEVKKYCIRIIEERGAFGYTLKRLQELHDLLLSHIDMLGGNKELKNLIE 285
>gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 300
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D+ +A E IHTA+L+HDDV+D + RRGK + ++G + S+L GDF+LS +
Sbjct: 42 GIKDSQKKIAMITEMIHTASLMHDDVIDAADTRRGKTSINELFGQRKSILAGDFVLSISS 101
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + LS V L +GE QL N + YL KTA L + +
Sbjct: 102 QALARIGDPDVVIVLSTVIEDLVKGEFMQLGSKDNENERFSHYLMKTYKKTASLMAHSCR 161
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++A V + YG N+G+AFQLVDD+LD+ + MGK D + G T PV
Sbjct: 162 AVAMLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVSCDDAMGKPTSADLKLGLATAPV 221
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A ++ + + + G ++++A + ++ + + A + ++A +
Sbjct: 222 LFAAEKYPELNDMIMRRFSHTG-----DVERARKAVANTDSIQQSRFLAEQHSREAVRQI 276
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L + + +++L+ + L R
Sbjct: 277 EKLTNCAERQALIYLTQEVLSR 298
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 75.8 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 14/286 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+E L + E++ + I S I + + Y + +GGKR+RP+L L+T
Sbjct: 1 MERLLRQYKEQIEQQLPAYIESLQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPI 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + +ACA+E IHT +L+HDD+ LRRGK V+G ++L GD LL+ AF
Sbjct: 61 DIGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQ 120
Query: 120 MVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+V + K+ + + L++ G + ++ + ++ + KT L
Sbjct: 121 VVADDKTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
++ +++ L + +LG+AFQ+ DD+LD G+ ++GK +G D N
Sbjct: 181 LQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIEND 240
Query: 233 KPTLPVILAFQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMR 275
K T P +L K+ + K + KI L I+
Sbjct: 241 KSTYPSLLTLDGAKKKLYDHMKEARKLLDEAKIDASLLHYICNIVE 286
>gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces
ambofaciens]
gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces
ambofaciens]
Length = 357
Score = 75.8 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 59/317 (18%), Positives = 114/317 (35%), Gaps = 29/317 (9%)
Query: 13 EKVNFLILKRI---------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
E+V+ ++ + S + + ++ + +GGKR+R +L + D
Sbjct: 18 EQVDAVLEDFLEDKAGAAARRSHPPEVANTLRAFLAAGGKRVRALLCVVGWHAAGGSEDR 77
Query: 64 HVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL-------- 113
+L A E L+HDD++DDSA+RRG+ A +
Sbjct: 78 AAVLRVAASLELFVAFALIHDDIMDDSAVRRGRPAVHRALCTRLGQSSRAERLGAGGALL 137
Query: 114 -----LSQAFCMVIE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
L A ++ + + + + G+ + + D +
Sbjct: 138 VGNLALIWAQELLHTADLPLRRRRTVHALYDAMLEEVMYGQYLDVMGTGPDDDIDAALRI 197
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
L++ + +AG ++ + G+ LG AFQ+ DD+LD G +
Sbjct: 198 ARYKTATATVERPLQLGAAVAGADDTTVNLCTALGLPLGEAFQIRDDLLDVFGSTDGACT 257
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D R GK T+ + L + T ++ +S + + + I+ E A T
Sbjct: 258 PGLGDLREGKRTVLLALGLRAATPAQQRRLRSLVGRADLDEHGAAEVRAILEETGARRRT 317
Query: 284 EYRAYSYGQKAKDSLRC 300
E+ S ++A L
Sbjct: 318 EHMITSRYEQALRVLDA 334
>gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
Length = 326
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M+E L + +E+V LI + V+ ++ GK LR L L A +
Sbjct: 1 MIEILLKEWIERVKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMLRSKLLLLCAFLGSN 59
Query: 59 --YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLIAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F E + LS + GE+ Q D++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQKDISEKKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + G + Q LK + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQSYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSKITVYLEKILN 320
>gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
Length = 293
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKIIDESLFKEISERKIEPTLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVTIAKSALSGHDFDD----EILLQLADLIALREN 293
>gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088]
gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088]
gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTVTLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
EK+ + + + + + Y + +GGKR+RPML A+ + A A
Sbjct: 14 EKLEIHLKDYVHKLNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAA 73
Query: 71 IEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE +HT +L+HDD+ LRRGK V+G ++L GD LL+ +F + ET +
Sbjct: 74 IEMVHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAETPDEF 133
Query: 129 ---------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
E G + + ED ++ KT L ++
Sbjct: 134 ASAETKLSLIKELSKASGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVS 193
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A QAL + +LG+AFQ+ DD+LD G +GK +G D K T P
Sbjct: 194 GAILANASQETIQALSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYP-- 251
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ + A + + + AK+ LR
Sbjct: 252 --------------------------------SLLSMSGA----KEALEEHIRSAKEKLR 275
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ L E+ D R +
Sbjct: 276 --ETGLQTELLEEITDLIANRDH 296
>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland
1988]
gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL
R2-561]
gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
Length = 293
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y I +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E + ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVTIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A]
gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS]
gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22]
gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019]
gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171]
gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1]
gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989]
gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W]
gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS]
gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A]
gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22]
gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019]
gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171]
gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989]
gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1]
gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W]
gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W]
gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14]
gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010]
gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180]
gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11]
gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120]
gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167]
gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272]
gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 118/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLNALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
India7]
Length = 307
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LQAIQNKITSWIKEIESSFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ + D +
Sbjct: 111 KAF----FELSKMGEAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 MEASLKSMAILLNKDTKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQYGIIEETLKTAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
18818]
gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
18818]
Length = 297
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 16/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
ME++ I I + + ++ +L S GK LR L LA + ++ +
Sbjct: 1 MERIKAYIDMYIKECGNDEVLNLSSHL--SQGKMLRSKLLLAIS----GVSEDSLRACAL 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE I +A+LLHDDV+D++ RR K + ++GN+ ++++GD L S+AF S +
Sbjct: 55 IEMIQSASLLHDDVIDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAF----YELSCLDV 110
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
V+ + + ++ D IK + + + A ++
Sbjct: 111 RLAQSVSSAVVRLSIGEIEDVSLASRFHIDKQAYIKMCGNKTAALIVAAAECGAILKGLN 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ + YG NLGIAFQ++DD+LD+ + +GK DF+ GK TLP++L +++ + E+
Sbjct: 171 KNIYRIYGENLGIAFQIIDDILDFTQDSKTLGKPSMSDFKEGKVTLPLMLMYEKLDENER 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + + M+++ A+ + A Y KA ++ +S+ K L
Sbjct: 231 EIVQGLWATELSEEQEI-WIKVRMQKHNAISQSIDEAKVYANKALMAVAN--ESNAK--L 285
Query: 311 MEVVDFCLQRL 321
E++ ++R
Sbjct: 286 QEIITQMIERT 296
>gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74]
gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ ++ E + + + G+ L +
Sbjct: 124 ILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|327261725|ref|XP_003215679.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Anolis
carolinensis]
Length = 387
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/339 (12%), Positives = 101/339 (29%), Gaps = 39/339 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + ++ + + +R ++ L +
Sbjct: 54 SLRCLLSDELSNIAMQVRKLAGTKHPLLDTARGFVSDSRNNLQ-----MRGLVVLLISKA 108
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ LA E IHTA L+H +V+ L + +
Sbjct: 109 AGPSITTENSLQNDMISGIYPSQRTLAEITELIHTAFLVHRGIVNIGELTSSDGPLKDMQ 168
Query: 102 GNQTSVLVGDFLL------SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
++ L + A + + LV E D
Sbjct: 169 FGNKLAVLSGDFLLANASTNLATLQNTKVVEIMSSAIGDLVQGIYYENSYLAEENGLTDD 228
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + + + L + + + + +A + +YG ++ ++ +L D+ +
Sbjct: 229 IGISIWKEHVFLSHSALLAKSCQAAMELAKHDVETQNKAFNYGKHMSMSRKLNVDIQPFF 288
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
E + + ++ G + K G + + K ++
Sbjct: 289 SESSNDSVAFNLNSA-----PVILHQELIGRETWIKQVKEARTKGNLI--DYSKLREAIK 341
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +G +A ++L C P S + +L +V
Sbjct: 342 AGKGVTSAIDLCRFHGNRALEALECFPPSEARSALENIV 380
>gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5]
Length = 304
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 74/339 (21%), Positives = 126/339 (37%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + ++ L+ + + E + + Y + +GGKRLRP L + +
Sbjct: 6 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+H +DD +RRGK + + T++L GD
Sbjct: 66 AALLGGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGD 125
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF +V ++ + G ++ E +
Sbjct: 126 SLLTYAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIR 185
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E ++IAG R+ L+++G +G+AFQL DD+LD + MGK
Sbjct: 186 LQAMKTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSDAATMGK 245
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + +
Sbjct: 246 ATGKDAARGKGTLVALH--------------------------------------GMEWA 267
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + A+ L P S+ +L+ F R N
Sbjct: 268 ETELRRHVADAEALLA--PYSARASTLIAAAHFIADRKN 304
>gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354]
gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354]
Length = 299
Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + + + + + G+ L +
Sbjct: 124 ILSDADMPKVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 356
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 67/352 (19%), Positives = 117/352 (33%), Gaps = 44/352 (12%)
Query: 11 DMEK-VNFLILKRICSDVEM-------IPDVVK---YLIFSGGKRLRPMLTLATALMLEY 59
D+ K V+ + + + + V + SGGKR+RP
Sbjct: 9 DLAKHVDSALAAYLADRRALGERMERSFTEAVDGLTDFVLSGGKRVRPTFAWWGWRAAGG 68
Query: 60 RGD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----LVWGNQTSVLV 109
D + ++E I L+HDD++D S RRG+ N
Sbjct: 69 DPDQESAGRVLTAVSSLELIQACALIHDDLMDASETRRGRPTIHVQFARRHRENSWLSSP 128
Query: 110 GDFLLSQAFCMVIETKSQEALE-----------------ALSLVACTLAEGELRQLSLSK 152
F L+ A + + + LA L L+ ++
Sbjct: 129 EQFGLAAAVLIGDVALAWADDMLFAAGLPTDALQRLSLPWRDMRTEMLAGQYLDVLTQAR 188
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+ A L + + I G + + L+++G ++G+AFQL DD+L
Sbjct: 189 GDASADAALRIDRLKTAAYTVERPLHMGAAIGGGSAELIEGLRAFGRDIGVAFQLRDDLL 248
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
G+ GK G+D R GK TL V L + G + + + +
Sbjct: 249 GVFGDPAVTGKPAGDDLREGKRTLLVALGVEHGADA----LEGALGRPDLGDAEVDVVRE 304
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRLN 322
+ A+ E R + A +L P D + + L + +R +
Sbjct: 305 QLVAVGAVDACERRITELTESALRALEAAPVADPAVTERLAGLAVSATKRTS 356
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis
ATCC 14580]
gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
ATCC 14580]
gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
Length = 296
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDV 84
++ + + Y + +GGKRLRP+L LA + + + CA+E IHT +L+H
Sbjct: 30 PSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-------- 136
+DD LRRGK ++G T++L GD LL+++F M+ + +
Sbjct: 90 MDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNELISA 149
Query: 137 -ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
G +++ V+ ++ + + KTA L S ++ +++A + L+
Sbjct: 150 AGAEGMVGGQILDMEAESKSVSLDELQRIHEGKTAKLLSFSVIAGAILADASEKEIEKLR 209
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ ++GI FQ+ DD+LD G +++GK IG D NGK T P +L
Sbjct: 210 EFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLL--------------- 254
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+L + + +KAK + LP K+ + E D
Sbjct: 255 -----------------------SLEGASQKLDEHIEKAKQLISELP--LEKELMYEFCD 289
Query: 316 FCLQRLN 322
R +
Sbjct: 290 MIAARDH 296
>gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
Length = 297
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 155/320 (48%), Gaps = 25/320 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ ++DL + +++++ ++ + GK+LR L LA A
Sbjct: 1 MQPIDDLIKQYLQELD---------YEPILTMLAN---TKSGKKLRSKLLLAIA----GE 44
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
N + AIE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF
Sbjct: 45 NANSYKICAAIELIHLASLLHDDIIDESKLRRGAKSVNAEFGTKNALMLGDILYSKAF-Y 103
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S LA GEL + LSK+ + ++ YL +I +KTAVL A+
Sbjct: 104 ELSQLDACFASIISDAVVKLAVGELMDVELSKSFNADKDKYLKMIYNKTAVLIEASARCG 163
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ N +A YG NLG+AFQ++DD+LD +G+ +GK DF+ GK TLP I
Sbjct: 164 AIL---ANLDEKAFGEYGKNLGLAFQMIDDILDIKGDEKTLGKPAMNDFKEGKTTLPYIY 220
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ K+ + E + E +AL A Y +A +++
Sbjct: 221 LYENLNNEDRAQLKNLFQKDLNNDEKI-WIQTKFEETKALNKAILEAKEYAHQAALAIKD 279
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + L +++ + R
Sbjct: 280 FSN----EKLQDIIQAMIDR 295
>gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 309
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 74/335 (22%), Positives = 132/335 (39%), Gaps = 54/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML- 57
L++ + +V + + + + + ++Y + +GGKRLR L L +A +
Sbjct: 15 SALKEALTRRAHEVEAALDRLLPVPPGPESRVVEAMRYAVLNGGKRLRAFLVLESAALFD 74
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ V A ++E +H +L+H +DD LRRGK +A + T++L GD L +
Sbjct: 75 GAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAGDALQT 134
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKS 167
AF ++ + + A + LA + + + +
Sbjct: 135 SAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVGRLHAL 194
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + E ++ + ++AL SYG +LG AFQ+VDD+LD G E+GK G+
Sbjct: 195 KTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTEGTAEELGKTAGK 254
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T +L + + A
Sbjct: 255 DAAAGKATFVAVL--------------------------------------GIEGAKREA 276
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK +L + L +VD+ L R +
Sbjct: 277 QALADRAKAALSVFGGRAA--ILTALVDYVLARRS 309
>gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGKANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101]
gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101]
gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
Length = 354
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/358 (16%), Positives = 114/358 (31%), Gaps = 44/358 (12%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV----------EMIPDVVKYLIFSGGKRLRPMLT 50
M L + V+ ++ + + + + D ++ GGKR+R + T
Sbjct: 1 MDRLHQP-ADIIAHVDAVLEQELGTFAHELAGLSPVASELTDPIR-AFCVGGKRIRALAT 58
Query: 51 LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-- 108
+ +A ++E +H A L+HDD++D+S +RRG + +
Sbjct: 59 WWGYQLAGGTHPGIAHMAASVELLHAAALIHDDIIDNSDMRRGNPSTHAFFSQMHGSAGF 118
Query: 109 ----------------------VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+ + V
Sbjct: 119 EGDARSFGINAAIIAGDVCLGLSEQLFNASGLNVTDPNVRATHDAFRRDVMMGQYLDIRI 178
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
Q + + + + + E+ + +AG + L ++ + LG AFQ
Sbjct: 179 QAAPVPDSQIVDRAMEVLTYKSAKYSVEQPFELGARLAGAKPQFVHDLSAFTLPLGQAFQ 238
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
L DD L G+ GK G+D GK T+ V L R + + + +
Sbjct: 239 LRDDELGVFGDPQATGKPAGDDLVEGKKTVLVGL----ALARMNDEDARWFRERLGTDTD 294
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD----SSWKKSLMEVVDFCLQR 320
+ ++ E A + E + Q A +L L S+ + L + +R
Sbjct: 295 TDRMIALLDECGAKREHEELIETKLQDAFVALDTLGQHGVSSNDLELLRAYANRLTRR 352
>gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 79/339 (23%), Positives = 135/339 (39%), Gaps = 60/339 (17%)
Query: 3 MLEDLTLKDMEK----VNFLILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATA 54
M+ D+ +++EK + S + + + Y + +GGKRLRP+L + A
Sbjct: 1 MMNDMVKRELEKNRVWFEDHLNSLCSSRPENIPPRLWESMTYSLQAGGKRLRPILCVKAA 60
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDF 112
+ + + +A A+E +HTA+L+HDD+ LRRGK +++G+ ++L GD
Sbjct: 61 ESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHMIYGDALAILAGDA 120
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY----------L 162
LL+ AF ++ + S+V + S V + D
Sbjct: 121 LLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGPSGICGGQVLDTDPASFTSSLSFVA 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
++ KTAVL A+L +++ G + A YG +LG+AFQ+VDD+LD E+G
Sbjct: 181 NIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPEELG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K T L +
Sbjct: 241 KTPGKDAAQQKITFVTQF--------------------------------------GLEE 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A ++A +SL L S+ ++ +R
Sbjct: 263 ARKMALKESKEAAESLFMLGSSAV--FFQKLALSLSKRS 299
>gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818]
Length = 303
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 16/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++ I I + + ++ +L S GK LR L LA + ++ +
Sbjct: 7 LERIKAYIDMYIKECGNDEVLNLSSHL--SQGKMLRSKLLLAIS----GVSEDSLRACAL 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE I +A+LLHDDV+D++ RR K + ++GN+ ++++GD L S+AF S +
Sbjct: 61 IEMIQSASLLHDDVIDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAF----YELSCLDV 116
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
V+ + + ++ D IK + + + A ++
Sbjct: 117 RLAQSVSSAVVRLSIGEIEDVSLASRFHIDKQAYIKMCGNKTAALIVAAAECGAILKGLN 176
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ + YG NLGIAFQ++DD+LD+ + +GK DF+ GK TLP++L +++ + E+
Sbjct: 177 KNIYRIYGENLGIAFQIIDDILDFTQDSKTLGKPSMSDFKEGKVTLPLMLMYEKLDENER 236
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + + M+++ A+ + A Y KA ++ +S+ K L
Sbjct: 237 EIVQGLWATELSEEQEI-WIKVRMQKHNAISQSIDEAKVYANKALMAVAN--ESNAK--L 291
Query: 311 MEVVDFCLQRL 321
E++ ++R
Sbjct: 292 QEIITQMIERT 302
>gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110]
gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638]
gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A]
gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11]
gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952]
gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9]
gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B]
gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185]
gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50]
gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736]
gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9]
gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli]
gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli]
gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110]
gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638]
gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A]
gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11]
gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952]
gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
[Escherichia coli BL21(DE3)]
gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1]
gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042]
gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185]
gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407]
gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1]
gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B]
gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G]
gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68]
gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482]
gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489]
gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007]
gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9]
gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 71/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L E
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
Length = 300
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 6 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 64
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 65 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 124
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 125 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 185 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 245 QLGKSTYP----------------------------------ALL----GLEQARKKARD 266
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 267 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 298
>gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
Length = 304
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
V L+ + S + + +++ + +GGKRLRP L TA +L +
Sbjct: 18 AVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSETAALLGGDVQAAL 77
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A+E IH +L+HDD+ +D+ +RRGK + + T++L GD LL+ +F ++
Sbjct: 78 RIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGDSLLTFSFDIIAA 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
++ + + + LA + + KT L
Sbjct: 138 PETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVLLQSMKTGALLRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IA RQ L+++G +G+AFQL DD+LD + +GK G+D GK T
Sbjct: 198 ACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTADAAHIGKATGKDAARGKGT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + E R S +A+
Sbjct: 258 LVALHGQPW--------------------------------------AEQRLESLVAEAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L P + + L E F R N
Sbjct: 280 ALLE--PYGARSEVLAETARFIANRRN 304
>gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum]
Length = 300
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 108/292 (36%), Gaps = 6/292 (2%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ ++ + KY+ + GK +R +L + L+ ++ ++ +H ++LL D
Sbjct: 9 LTDKEAVLLEPYKYITETPGKGVRALLIESFNHWLKVEDRVVKEVSSLVQSLHMSSLLID 68
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ D+S LRRG A ++G ++ +F+ + + + +A +
Sbjct: 69 DIEDNSLLRRGTPTAHTLYGVPQTINCANFVYFLSIEQCMRLGNHQATQVYIEELVRSHR 128
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ + N ED + + + + + NL
Sbjct: 129 GQGWDIYWRDNQICPTEDEYKSMVKDKTGGL---FRMGLRVLQCFSENKTDYTLLIDNLA 185
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+ +Q+ DD L+ K ED GK + PVI A K+ +
Sbjct: 186 LYYQIRDDYLNLVSGDYHNFKTFCEDITEGKYSYPVIRA--MLNDPTDTRLKTILKQRTT 243
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEV 313
S + + A +++ AL T+ Y +K + L + + K + ++
Sbjct: 244 SADIKQCALDYLKKTGALEQTKEVINQYREKILMQIEELGGNPLFYKIMEKL 295
>gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + + G+ L
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLNALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15]
Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSFDTSALEALADYIIQR 297
>gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 295
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 123/321 (38%), Gaps = 52/321 (16%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + + ++ E + + +Y +F+GGKRLRP L AT ML + +LA AIE
Sbjct: 16 ATLQQHFKQPLDTE-ETVKNATQYGLFNGGKRLRPFLVYATGKMLGANQQDLHVLAAAIE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH+ +L+H +DD LRRG+ + +G ++L GD L + AF ++ K +
Sbjct: 75 CIHSYSLVHDDLPAMDDDDLRRGRPTCHIEFGEANAILAGDALQTLAFELIANHKFTCSS 134
Query: 131 EALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLF--SAALEVSS 181
+ + TLA + + V L I A +
Sbjct: 135 QTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELARIHKLKTGALINCAITLGAL 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ L +G +G+AFQ+ DD+LD G+ +GK G D K T P +L
Sbjct: 195 CSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPALLG 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +A + Q+A ++L +
Sbjct: 255 MLG--------------------------------------AKEKAQNLIQQAHEALANI 276
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+ L + ++ ++R +
Sbjct: 277 D--ADTTLLASLANYLIERDH 295
>gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
Length = 290
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 54/320 (16%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + +I + + D + Y + +GGKR+RP+ L T L + + A+
Sbjct: 12 LQDIEEVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVAL 71
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK+ + T++L GD LL+ +F M+ E K
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGKFDAD 131
Query: 130 LEALSLV------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ + ++ + V KT L AA + +I
Sbjct: 132 IKLPLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGII 191
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + Q L G N+G+ FQ+ DD+LD G E+GK +G D N K T +L
Sbjct: 192 MKLTDEKIQLLDQIGRNVGLMFQIQDDILDVEGSFEEIGKPVGSDVENDKSTYVSLL--- 248
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS---YGQKAKDSLRC 300
L ++ + +K +LR
Sbjct: 249 -----------------------------------GLEQSKALLKEKFDHTEKLVQALRP 273
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ D L++++ F ++R
Sbjct: 274 INDG-----LLQLIRFIMER 288
>gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
Length = 307
Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 30/326 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +++ ++++ + + S + K LR L LA +L+ +
Sbjct: 6 LQAIQNKIASWIKEIESGFIDALFSKI------------GPSKMLRSKLMLA---LLDEK 50
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATIRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+AF S+ +++ + ++ + D +
Sbjct: 111 KAF----FELSKMGESIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHF 166
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+A + N + +G+N G+AFQ++DD+LD + +GK DF+ GK T
Sbjct: 167 IEASLKSMAILLNKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LP +L +++ + E+ S E ++ ++ + +T A Y +KA
Sbjct: 227 LPYLLLYEKLNQHEQGLLISYFKQDNH--EIIEWTKEKFKQYGIIEETLKIAQVYSKKAL 284
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++ L ++ + R
Sbjct: 285 EAIK----GENNLILEKLAQDVIYRT 306
>gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
Length = 293
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKIIDESLFKEISERKIEPTLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E ++ ++L+ + +++ VT E+ + KT
Sbjct: 121 AFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADMEAESKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVTIAKSALSGHDFDD----EILLQLADLIALREN 293
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 114/320 (35%), Gaps = 49/320 (15%)
Query: 13 EKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
V + + ++Y + +GGKRLRP+L LA A + + ACA
Sbjct: 15 ALVESRLATIFADGRSPSPLVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACA 74
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVI 122
IE IHT +L+H +DD LRRGK + + T++L GD LL++AF +
Sbjct: 75 IECIHTYSLIHDDLPAMDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAFTLASSLELRP 134
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
E + + G + + KT L + +
Sbjct: 135 ERILKAVFHLSTAAGPRGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCV 194
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ G +S + YG +G+AFQ+ DD+LD G+ +GK +G D GK T P
Sbjct: 195 LGGGDDSEQAKASEYGRAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYP----- 249
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ + + A +A +L
Sbjct: 250 -----------------------------ALL----GIDQSRVLARQSVDQALAALAGF- 275
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
L V + L R +
Sbjct: 276 SHPRADFLRAVALYILDRTH 295
>gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
Farnesyltransferase; Heptaprenyl diphosphate synthase
component II [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
Farnesyltransferase; Heptaprenyl diphosphate synthase
component II [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
Length = 326
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M+E L + +E+V LI + V+ ++ GK LR L L A +
Sbjct: 1 MIEILLKEWIERVKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMLRSKLLLLCAFLGSN 59
Query: 59 --YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLIAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F E + LS + GE+ Q D++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + G + Q LK + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLTEILQLQSYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSKITVYLEKILN 320
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 61/343 (17%)
Query: 1 MKMLE----DLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M + D+ + +++ +L + S E + V + + GGKR+RP L A A
Sbjct: 1 MSSISPVNADVLKQAQQRIQQDLLTALAAFSLPEPLKAAVHHAVMLGGKRVRPALCYAAA 60
Query: 55 LM-LEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQANQNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQE------------ALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ + ++ L+ + + G++ L +E
Sbjct: 121 ILQSMAFEILGSRLFDDQAQGTDAAIVLKQMQILATASSKMVCGQVLDLQAEGKHVAQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ +G ++G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIYSGTDQAIPKLRQFGQSIGLAFQVQDDILDITASTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A + +A ++L +++ K L+E+ F L R N
Sbjct: 263 LEQAQTYAQTLHDQAFEALEYFGENA--KELIEISKFLLDRKN 303
>gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
proteobacterium HIMB114]
gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
proteobacterium HIMB114]
Length = 292
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 52/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + +KVN + S + + ++Y +FSGGK +R L +T + +
Sbjct: 1 MSNFQQELKLTADKVNAFLKSYFKNQSADNRLYEAMEYGLFSGGKMIRSYLVQSTCKIFD 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
++ +A A+E +H+ +L+HDD+ RRGK + +G T++L G LL+
Sbjct: 61 IDEKKYIPIAAAVECVHSYSLIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGSSLLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKTAV 171
AF M+ + K + + + + L+ +E D +I +
Sbjct: 121 AFEMISDPKFEIDEDIKTKIIHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIIDMQNKK 180
Query: 172 LFSAALEVSSLIAGVQNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ + + + + + K G+ +G+ FQ+VDD LD G+ +GK +D
Sbjct: 181 TGALMGFCTEVAPLLSHKKELAKTFKDLGIKIGLLFQIVDDFLDKYGKSETLGKPTQQDE 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK TL V L T+
Sbjct: 241 SKGKNTLIVHL--------------------------------------GEEKTKALIAD 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + L + L+ ++F ++R N
Sbjct: 263 LKSEITNQLSSFSQTDE---LLNCINFIIERKN 292
>gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
Length = 363
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 75/353 (21%), Positives = 126/353 (35%), Gaps = 33/353 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTLA---TA 54
+ + +++ I S + + + YL + GGKR+RP+ A A
Sbjct: 9 LDEIPAAVREELALFLDRQRDAIASIGAPVTNAISYLESFVLDGGKRIRPLYAWAGFIGA 68
Query: 55 LMLEY--RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------- 105
LE + A ++EFI L+HDD+VD S RRG +
Sbjct: 69 RGLEGTESPQAMLRAATSLEFIQACALIHDDIVDASDTRRGNPTVHRGVAARHRELGFHG 128
Query: 106 ---------SVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELRQLSL 150
++LVGD L A M+ ++ ++ ++ + L
Sbjct: 129 DADFFGQSLAILVGDMALVWAEDMLQDSGLSPEALARARAPWRAMRREVIGGQMLDICLE 188
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
++ + A L + + IAG + A + YG ++G+AFQL DD
Sbjct: 189 AEGSEDATLADSVNRFKTAAYTIERPLHLGAAIAGAPEKLVAAFRGYGQDIGVAFQLRDD 248
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLK 268
+L G+ GK G+D R GK T+ + LA QR + +
Sbjct: 249 LLGVFGDPAVTGKPAGDDLREGKRTVLLSLALQRADASDPAAAAELRRLIGQTEDPSEIA 308
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
+ I+ + A E R + D L S ++L E+ R
Sbjct: 309 RMAQIIAASGAPDVVEQRINDLTRSGLDHLHNAQVSPEVTETLEELAHKSTAR 361
>gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937]
gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937]
Length = 303
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/339 (19%), Positives = 119/339 (35%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M +++N + + I + + + + + GGKRLRP L T +
Sbjct: 1 MTDFLKQLTAHHQRINATLNQFISTLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+N A A+E IH +L+H +DD LRRG+ + +G ++L GD L +
Sbjct: 61 GISQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + E + L + G+ L +
Sbjct: 121 LAFSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLALERIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ ++ + L Y +G+AFQ+ DD+LD G+ GK
Sbjct: 181 HKTGALIRASVRLGALAAGERGRLALPCLDRYANAVGLAFQVQDDILDVIGDSATTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + GK T P ++ L +
Sbjct: 241 GADQQLGKSTYP----------------------------------ALL----GLEQAKI 262
Query: 286 RAYSYGQKAKDSLRCLP---DSSWKKS-LMEVVDFCLQR 320
+A Q++ +L L D+ + L + ++ ++R
Sbjct: 263 KARELCQESLSALNELEDTLDNPAAIAPLRSLANYVVER 301
>gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
flavus NRRL3357]
gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
flavus NRRL3357]
Length = 320
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/279 (20%), Positives = 101/279 (36%), Gaps = 5/279 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++I + YL+ SGGK +R L LA L+ + +++ + +HTA+LL DD
Sbjct: 28 KSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDD 87
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRGK A ++G ++ ++ A + S A + L G
Sbjct: 88 IQDSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRG 147
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ D ++ + ++++ LG
Sbjct: 148 QGMD---LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCIPLTNTLGT 204
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD+L+ G K ED GK + P+I + + + +
Sbjct: 205 IFQIRDDILNLSGGEYTKNKGFCEDITEGKFSFPIIHSIN--SDPRNMQLMNILRQRSED 262
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
A + R+ + + S +AK + L
Sbjct: 263 NSLKAYAVDYITSTRSFTYSYQKLNSLIAEAKSMVEELD 301
>gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 372
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/364 (18%), Positives = 126/364 (34%), Gaps = 49/364 (13%)
Query: 6 DLTLKDMEKVNFL---ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML----- 57
DL ++ IL I ++ I + + + SGGKR R + +
Sbjct: 9 DLIQSRLDGFLDARASILVSIAEELSPIAEFSRDFL-SGGKRFRALFCFWGWQAVRTSGE 67
Query: 58 ---------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--- 105
D V +A A+E H A L+HDD++D+S RRG + + +
Sbjct: 68 DATDETVTAGGPLDAVVSVASALELFHAAALVHDDLIDNSDTRRGAPSVHRRFESLHDSE 127
Query: 106 --------------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ + + +++ + + A
Sbjct: 128 KWSGCGKSFGTGAATLLGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQ 187
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYG 198
+ ++ VI K+A + L + + +AG AL +G
Sbjct: 188 YLDLFEEIGWAGRHDADQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFG 247
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+ LGIA+QL DD+L G+ GK G+D R GK T+ + L + + +
Sbjct: 248 LPLGIAYQLRDDLLGVFGDAAVTGKPSGDDLREGKRTVLIALTREALPAGARATLDELLG 307
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFC 317
D ++ ++ + +R++ A+ E +A +L P K L +
Sbjct: 308 DPDLTPGQIETLQLTIRQSGAVEKVERMIADSVGRAIAALETAPIGESAKAQLRTLAVTV 367
Query: 318 LQRL 321
+R
Sbjct: 368 TRRT 371
>gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 358
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/330 (23%), Positives = 122/330 (36%), Gaps = 29/330 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLLACAIEFIHTAT 78
I S V++ + + + SGGKR+RP+ A + N ++EFI
Sbjct: 28 SAIGSHVDVASEALSDFVVSGGKRVRPLYAWAGYVGGGGDESNTAVQRACSSLEFIQACA 87
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQ--------------------TSVLVGDFLLSQAF 118
L+HDD++D S RRG ++L+GD L A
Sbjct: 88 LIHDDIIDASDTRRGNPTVHRRMETYLRDYPGFSGPTERAAEFGTSVAILIGDLALVWAE 147
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVL 172
M +E+ + + + A E+ + + I +
Sbjct: 148 DMFMESGVELSDLMRARPAWNAMRAEVIGGQILDISAEAVGETSEDTARRVNIYKTASYT 207
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ L++ L+AGV +S +A YG NLGIAFQL DD+L G+ + GK G+D R G
Sbjct: 208 ITRPLQIGGLLAGVDDSTLEAFAGYGRNLGIAFQLRDDLLGVFGDPSVTGKPAGDDLREG 267
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T + +A + + + + + I+R + A D E R +
Sbjct: 268 KRTELLAVAVDKLNGTPEAQYLLDNVGTTSDPATIARLADIIRASGAADDMERRIATLRD 327
Query: 293 KAKDSLRCLPDS-SWKKSLMEVVDFCLQRL 321
L S L E+ QR
Sbjct: 328 TGLSCLDTAAISDDATTILKELAIKTTQRT 357
>gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863]
gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E +H +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECVHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a]
gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 291
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/329 (20%), Positives = 122/329 (37%), Gaps = 51/329 (15%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IHT +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHTYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G +D + KT L
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A++ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + + + +
Sbjct: 243 STYP----------------------------------ALL----GMDGAKAKLAELATR 264
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D L+ P ++L + F + R +
Sbjct: 265 MHDVLQ--PYGQPGETLASLGRFAVDRAH 291
>gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 369
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/369 (19%), Positives = 129/369 (34%), Gaps = 51/369 (13%)
Query: 1 MKMLEDLT--LKDM-EKVNFLILKRI----------CSDVEMIPDVVKYLIFSGGKRLRP 47
M L +D+ E+V+ + + D + + D ++ GGKRLR
Sbjct: 1 MSSLAQPLVDREDLREQVDTRLRAVLAEQRTVLAGISGDADPLADAWSQML-RGGKRLRA 59
Query: 48 MLTLATALMLEYRGD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ + V + A+E A L HDDV+D S RRG A +
Sbjct: 60 AFAYWSWRAHGGAPGGAEAASIVGVGAALELFQAAALFHDDVMDRSDTRRGVPTAHRTFA 119
Query: 103 NQT-----------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ S++ + +A V A + +
Sbjct: 120 ARHRDAGWSGDADQFGLSAAILLGDLSLVASEDEFLRAVRDVPAAAVAPARSLFTQMRTE 179
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTA------VLFSAALEVSSLIAGVQNSVRQA 193
+ G+ + + D + + + + + +AG
Sbjct: 180 VTVGQYLDMHAQMLPWTDDFDADERRAREVVRSKSARYSVESPIAIGAALAGADAEQLAT 239
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
++G+ LG AFQL DD+L G+ GK G+D R GK TL V+ A + E+
Sbjct: 240 CSAFGLPLGEAFQLRDDLLGAFGDPEATGKPAGDDLREGKRTLLVVRAMRALGPVERAEL 299
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLM 311
S + ++ +++K +RE A+ + E + A +L L ++L
Sbjct: 300 ASRLGAPDLTASDVEKMQRTIRETGAVDEVEQLIETLSGSALATLESSGL-SGPAVETLG 358
Query: 312 EVVDFCLQR 320
++ +QR
Sbjct: 359 DLARAAVQR 367
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 18/292 (6%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M L E + V + + E + + Y + +GGKR+RP+L LAT
Sbjct: 1 MAQLSVEQFLNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLL 114
L + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL
Sbjct: 61 LGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALL 120
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVI 165
+ AF ++ E ++ L + E + ++
Sbjct: 121 TYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT + ++ +L+ G + L + +LG+AFQ+ DD+LD G ++GK +
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTK---REKNFWKSTINDGKISVENLKKAFIIM 274
G D N K T P +L+ + + K + KI L ++
Sbjct: 241 GSDRDNKKATYPALLSLGGAKEKLAFHIDAAKRHLQQAKIDDAVLVYICELV 292
>gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 121/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M +
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPLVETMQYGALLGGKRLRPFLVYATGHMFDVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3]
gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3]
Length = 329
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 12/304 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
+ +E+V +IL + + +V+Y + + GK LR L L A M E + +
Sbjct: 12 IERGLEEVKSIILSEMMVLHPAVTSKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123
A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ + + +
Sbjct: 71 YFAAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGL 130
Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + T+ GEL QL + ++T + YL I+ KTA LF A ++
Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S + G G LG+AFQL DD++DY+ +V E GK +D +NG T P++
Sbjct: 191 GSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGKPRLQDIQNGIYTAPLL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
A + ++ + + E L+ + A+ TE SY +K + +
Sbjct: 251 FAMREDKSIQQQLRAYIQSP---TAEGLEILTDRIFATHAIAKTEKLIVSYLEKMMNFVD 307
Query: 300 CLPD 303
+P
Sbjct: 308 RIPQ 311
>gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + + Y GGKRLRP L AT M + A A+E
Sbjct: 15 NDALRRFIEPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDNTLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVS 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L + G+ L E+ A++ +A +
Sbjct: 135 DRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVTLEQLERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGERGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L + +A A+ SL
Sbjct: 252 -------------------------------ALL----GLEHAQRKARDLIDDARRSLNE 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + D+ +QR
Sbjct: 277 LAAQSLDTSALEALADYIIQR 297
>gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae]
Length = 312
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/279 (20%), Positives = 101/279 (36%), Gaps = 5/279 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++I + YL+ SGGK +R L LA L+ + +++ + +HTA+LL DD
Sbjct: 20 KSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDD 79
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRGK A ++G ++ ++ A + S A + L G
Sbjct: 80 IQDSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRG 139
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ D ++ + ++++ LG
Sbjct: 140 QGMD---LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCIPLTNTLGT 196
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD+L+ G K ED GK + P+I + + + +
Sbjct: 197 IFQIRDDILNLSGGEYTKNKGFCEDITEGKFSFPIIHSIN--SDPRNMQLMNILRQRSED 254
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
A + R+ + + S +AK + L
Sbjct: 255 NSLKAYAVDYITSTRSFTYSYQKLNSLIAEAKSMVEELD 293
>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
Length = 305
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/339 (19%), Positives = 125/339 (36%), Gaps = 62/339 (18%)
Query: 5 EDLTLKDME----KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
++ ++++ ++ LI + + + I + + Y + +GGKRLRPML +
Sbjct: 6 KETFKQELDARTAEIEQLIGTYLPEETGHQKTIFEAMNYSMKAGGKRLRPMLMQEMCRLF 65
Query: 58 EYR-GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + A+E IHT++L+HDD +DD +RRGK + +G VL GD L+
Sbjct: 66 TGTLLEAVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGDALM 125
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL------------DVTEEDYL 162
AF R+ + + + +
Sbjct: 126 MYAFETAANAFETSIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPGDKLE 185
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + KT L A++ + +++ G + ++S +G+AFQ+ DD+LD G + G
Sbjct: 186 FIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTGSQDVTG 245
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G D +N K T + L
Sbjct: 246 KPSGSDEKNKKTTYVTLE--------------------------------------GLDK 267
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +A + L LP ++ L +++ + R
Sbjct: 268 AKKDVEQISTEAIEELNKLPGNN--DFLEQLIRALVGRQ 304
>gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
Length = 309
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 66/335 (19%)
Query: 14 KVNFLILKRICSDVE------------MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+V+ L+ + + S + + Y + +GGKR+RP+L ATA +
Sbjct: 15 RVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRPVLVYATAAAITTDV 74
Query: 61 ----GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
N +AC+IE IH +L+H +DD LRRG+ + T++L GD L
Sbjct: 75 SPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRAFDEATAILAGDALQ 134
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKS 167
++AF ++ E L+L+ R + + + + + + +
Sbjct: 135 ARAFELLTELTECPPHIHLNLLRILTQASGQRGMVGGQLIDLESVDKPIDVQQLETIHRL 194
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + + + G + L YG +G+AFQ+ DD+LD + +GK G
Sbjct: 195 KTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDILDIEADTATLGKTQGA 254
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D KPT P +L + + +A
Sbjct: 255 DIALNKPTYPSLL--------------------------------------GIDGAKAKA 276
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q++ ++ ++ L E+ + + R +
Sbjct: 277 AQLHQQSLTAIEHFDANAL--LLRELSGYIISRSH 309
>gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 429
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/315 (20%), Positives = 105/315 (33%), Gaps = 26/315 (8%)
Query: 32 DVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
D ++ S GGK LR L G+ + A + E +H LL DDV+D S
Sbjct: 113 DAAGDILMSYVSGGKCLRSTFVYLGWLCGAAPGEAALRAAASFELLHVFALLQDDVMDGS 172
Query: 89 ALRRGKVAARLVWGNQT----------------SVLVGDFLLSQAFCM--VIETKSQEAL 130
A RRG+ +A L + ++L+GD L + M S
Sbjct: 173 AERRGRPSAHLRFARWHRERGLSGSSRRFGESAAILLGDLCLIWSEQMLRESGVDSTRLH 232
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
A E + Q + + V+ + + I +
Sbjct: 233 RAWPRYDTMRTELAVGQFADLTSDVRQMPSLEAVLDVARRKSGNYTVRRPLEIGAAMSDC 292
Query: 191 RQAL----KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
YG +G AFQL DDVL G GK D R K T V+ A Q
Sbjct: 293 DDRTLTQLGRYGAAVGEAFQLRDDVLGVFGSPATTGKPCAGDLRERKATSLVVTAHQLAD 352
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+ + + + E + + ++ + A+ E A++ L P
Sbjct: 353 APARAELAALMTGRTLDDEAIGRWKALIVASGAVEMIEEMISDRVAAAREHLGGAPIAEP 412
Query: 306 WKKSLMEVVDFCLQR 320
+ +L ++ C R
Sbjct: 413 VRAALDQMATACTDR 427
>gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii SDF]
gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii]
Length = 303
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L +++ K L+E+ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFEALAHFGENA--KELVEISQFLLARTN 303
>gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELAGASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKAQD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073]
gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972]
gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073]
gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972]
gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972]
gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1]
Length = 299
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSI 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1]
gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1]
Length = 288
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 120/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 2 EVEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 242 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 263
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++L + F +R N
Sbjct: 264 SLLAPF--GEDAETLKQAARFIAERQN 288
>gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
Length = 303
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 114/302 (37%), Gaps = 47/302 (15%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y GKRLRP L TA + + + + ACA+E IH +L+HDD+
Sbjct: 41 RLTEAMRYAALGPGKRLRPFFALETARLFDADENAVLRAACALECIHAYSLVHDDLPCMD 100
Query: 89 AL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
RRG++ + T+VLVGD L S AF ++ + + + LA+
Sbjct: 101 DDDIRRGRLTVHRAYDEATAVLVGDALQSVAFEILASEDTHDDPLVRCELVRMLAQASGA 160
Query: 147 QLSLSKNLDVTEEDYL------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
Q + + + + KT L A ++ ++A V + + +
Sbjct: 161 QGMAGGQMIDLIGVHDDLGGVARMQRLKTGALIVYAFQIPLVVADVGEREGMVMTHFAQD 220
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG+A+Q+ DDVLD G+ EMGK T V L
Sbjct: 221 LGLAYQIADDVLDIEGDPEEMGKAASGKDAAKGKTNFVTLL------------------- 261
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + + R ++AK L + L E VDF L R
Sbjct: 262 ------------------GLDEAKSRVKILSEQAKSRLDIFG-GKAR-YLRESVDFVLNR 301
Query: 321 LN 322
N
Sbjct: 302 RN 303
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
Length = 303
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L +++ K L+E+ F L R N
Sbjct: 263 LEQAQVYAKELHDQAFEALAHFGENA--KELVEISQFLLARTN 303
>gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 306
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 93/313 (29%), Gaps = 34/313 (10%)
Query: 14 KVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ ++ + + D ++Y GGKR+RP+L A L + A A
Sbjct: 22 RIEDVLETLLPPAHLLPARLHDAMRYSTLGGGKRVRPLLVYAAGACLGVPLELLDRPAAA 81
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD+ +D+ LRRG + T++LVGD L +QAF ++
Sbjct: 82 LEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVGDGLQAQAFLVLA------ 135
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
SL++ I A + +
Sbjct: 136 ----EPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLAAVGHELALPALEQMHLHKTG 191
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + + + + E + + +
Sbjct: 192 MLMRCA------------IQLALCAAGIDAQEARGAALLRYADRVGLAFQVQDDILDEIG 239
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ S ++ L + A +A D+L+ +
Sbjct: 240 DLQQTGKAQQGADRSRNKPSFITLL-----GLAEARSYARRLLDEALDALQSWQ--AEAD 292
Query: 309 SLMEVVDFCLQRL 321
L + ++R
Sbjct: 293 HLRALARLIIERS 305
>gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans]
gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Herminiimonas arsenicoxydans]
Length = 294
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 121/320 (37%), Gaps = 52/320 (16%)
Query: 14 KVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++ +++ + + + + Y + GGKR+RP+L A + + A A
Sbjct: 14 EMELALVQHLPPVALTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAA 73
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------MV 121
+E IH +L+HDD+ LRRGK + + ++LVGD L SQAF
Sbjct: 74 VEMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGIDP 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + L A + + + G+ L+ EE A+L + L +
Sbjct: 134 VRQLAMVRLLAKASGSLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLGAL 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ QAL SY +G+AFQ+VDDVLD + +GK G+D + KPT IL
Sbjct: 194 AGKSLSAEETQALDSYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSIL- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + A A +L
Sbjct: 253 -------------------------------------GLEQSRTLAEKLRNDAHRALEQF 275
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+ + + L E+ D +QR
Sbjct: 276 GEKARR--LRELADLIVQRK 293
>gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Pichia angusta DL-1]
Length = 469
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G NLG+ FQ+VDD+LDY +GK G D + G T PV+ A++ +
Sbjct: 345 NCYQFGRNLGLCFQIVDDMLDYTTTAEMLGKPAGADLQLGLATAPVLYAWKEKPELGPMI 404
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
E+++ A + + + + T A +Y A +LR LPDS + +L
Sbjct: 405 -----GRKFSKPEDIEIARKAVEDAKGVEKTRELAETYCTGALRNLRTLPDSDARNALEM 459
Query: 313 VVDFCLQRL 321
+ + L R
Sbjct: 460 LTNSVLTRS 468
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ +M + I I S + V Y + GK +RP++ L + L +
Sbjct: 39 SMVSGEMRVLAKNIATLIGSGHPTLNRVASYYFEAEGKNVRPLIVLLLSKALAKIPE 95
>gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 291
Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/329 (19%), Positives = 121/329 (36%), Gaps = 51/329 (15%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G +D + KT L
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A++ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + + + +
Sbjct: 243 STYP----------------------------------ALL----GMDGAKAKLAELATR 264
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D L+ P ++L + F + R +
Sbjct: 265 MHDVLQ--PYGQPGETLASLGRFAVDRAH 291
>gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602]
gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602]
Length = 309
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 56/327 (17%)
Query: 13 EKVNFLILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++V+ ++ I + D+ ++ + ++Y GGKRLRP L A+ + N A
Sbjct: 22 QRVDEVLTAYISALPLADLPLV-EAMRYGALLGGKRLRPYLVYASGQLFSLDLKNLDAPA 80
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ +++
Sbjct: 81 AAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILSGDALQTLAFSILADSEM 140
Query: 127 QEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ L + + G+ L+ + A++ +A
Sbjct: 141 PDVAVKDRLAMISELALASGSSGMCGGQALDLAAEGQQVGLDALEQIHRHKTGALIRAAV 200
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +V L +Y +G+AFQ+ DD+LD G+ +GK G D + GK T
Sbjct: 201 RMGALAAGETGRAVLPILDNYAQAIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTY 260
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P ++ L + +A Q+A
Sbjct: 261 P----------------------------------ALL----GLDGAKAKAMDLYQEAVS 282
Query: 297 SLRCLPDSSWKKS-LMEVVDFCLQRLN 322
+L L S+ + L+ + F ++R N
Sbjct: 283 ALDQLAALSYNTAPLLALASFIIERDN 309
>gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 292
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 55/333 (16%)
Query: 4 LEDLTLKDMEKVNFLILKR--ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +L ++++N L+L+ + + + ++Y + +GGKR+RP+L + T ML
Sbjct: 1 MNNLI---IKQINELLLQSIPLSPLDTNLEESMRYSLEAGGKRIRPLLLIETLKMLSNNS 57
Query: 62 DNHVLLAC--AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D L A+E +HT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++A
Sbjct: 58 DYSKGLQTALALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKA 117
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTA 170
F ++ +A + LV + S+N + E + K KT
Sbjct: 118 FHLISTDSLLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTG 177
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + A+ + I N + L +Y +LG+ FQ+ DD+LD G+ +GK +G D +
Sbjct: 178 ALLTYAIMAAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGDEKNLGKPVGSDEK 237
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T +L +TE + +
Sbjct: 238 NHKNTYVTLLGQV--------------------------------------ETENKLEYH 259
Query: 291 GQKAKDSLRCLPDSSW-KKSLMEVVDFCLQRLN 322
+A+ SL L S + L ++ +R +
Sbjct: 260 VNQAETSLAQLKKSGYDTTQLEDLTKLFYKRDH 292
>gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342]
gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22]
gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342]
gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22]
gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
Length = 299
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/307 (22%), Positives = 110/307 (35%), Gaps = 51/307 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDV 84
+ + + Y GGKRLRP L AT M A A+E IH +L+H
Sbjct: 29 NTPLVEAMHYGALLGGKRLRPFLVYATGAMFGVSRTTLDAPAAAVECIHAYSLMHDDLPA 88
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA------- 137
+DD LRRG + +G ++L GD L + AF ++ + + + L
Sbjct: 89 MDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMADVSDRDRLAMVSELAQA 148
Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ G+ L + A++ +A + + AL
Sbjct: 149 SGVAGMCGGQALDLEAEGQQVDLQALERIHRHKTGALIRAAVRMGALSAGERGRAALPAL 208
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
Y N+G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 209 DRYAENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP----------------- 251
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEV 313
++ L +A+ A+ SL L S +L +
Sbjct: 252 -----------------ALL----GLEQARKKAHDLIADARRSLDELAAQSLDTSALEAL 290
Query: 314 VDFCLQR 320
++ +QR
Sbjct: 291 ANYIIQR 297
>gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
Q+ V Q +G NLG+ FQ+VDD+LDY N +GK D + G T P++ A++
Sbjct: 344 AQDDVVQNCYDFGRNLGLCFQIVDDMLDYTSSDNAIGKPSQADLKLGLATAPILFAWKER 403
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + I+ +++ A + + + + T A Y KA +LR LP+S
Sbjct: 404 PELGE-----LISRKFKEPGDVELARLAVDQCNGVEQTRKMAQEYCMKALGNLRVLPESD 458
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L + + L R
Sbjct: 459 ARSALELLTNSILTRT 474
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
L +M + I I S + V Y + GK +RP++ L + L
Sbjct: 49 LVSHEMSNLAKSIASMIGSGHPTLNRVSSYYFEAEGKNVRPLIVLLLSKAL 99
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 56/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ N + + + + +KY +F+GGKRLRP+L+LA+ M
Sbjct: 2 TFREQLQHYIDLTNEHLKDYFNMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQMFRD 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + AC IE IHT +L+HDD+ +D+ RRGK+ V+ ++L GD LL+ +
Sbjct: 62 DIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGLLNYS 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA- 176
F +++E ++ +VA + V E +I +
Sbjct: 122 FELMLENAIKQNDIYKHIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYIHINK 181
Query: 177 --------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L+V ++IAG Q + ++ G+NLG+AFQ+ DD+LD G+ ++GK+IG D
Sbjct: 182 TAALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAKLGKSIGRD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL-VDTEYRA 287
K T P ++ + + + AL + +
Sbjct: 242 LEKHKSTYPALIGLEAS----------------------------IEKVGALTNNVKQLL 273
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Y KA + L+E+ D+ R +
Sbjct: 274 HRYSSKA-------------EFLLELCDYLTSRES 295
>gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase;
Geranyltranstransferase (farnesyldiphosphate synthase);
Geranylgeranyl pyrophosphate synthetase [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 306
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 123/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPLPFGNSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L+ ++
Sbjct: 129 FSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQITLDDLEKIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGALGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D ++GK T P ++ L + +A
Sbjct: 249 DQQHGKSTYPALM--------------------------------------GLDCAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L S+ + L + F ++R N
Sbjct: 271 IDLYQEALSALNALSAQSYNTAPLQALACFIIERDN 306
>gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6]
Length = 299
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 114/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M + A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVS 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L + A++ +A +
Sbjct: 135 DRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A A+ SL+
Sbjct: 252 -------------------------------ALL----GLEQARKKARDLIDDARQSLKQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + D+ +QR
Sbjct: 277 LAEQSLDTSALEALADYIIQR 297
>gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
Length = 299
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 18/312 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E V LI K I D ++ K L SGGKRLR L L A LL
Sbjct: 5 LETVENLIAKLIDEVDYPHAAELFKKL--SGGKRLRARLILTIA----PHEPKAPLLGAI 58
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+D++ LRRG + G++T++++GD L S+AF +
Sbjct: 59 VELIHAASLLHDDVIDEAQLRRGVPSVNATEGSKTAIMLGDILYSKAFSELTSFDP---- 114
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
VA ++ + ++ + D +K + + A +
Sbjct: 115 SIARAVAESVTRLSVGEMMDVSMAERFNTDRDLYLKMLYLKTATLIEACAYSAAVLAGKD 174
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+A +YG NLG+AFQ+VDD+LD + +GK DF GK TLP I +++ ++
Sbjct: 175 AEAHATYGKNLGLAFQIVDDILDITADEATLGKPSLNDFSEGKVTLPYIDLYEKLEGEDQ 234
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + M + ++ A +A + +L
Sbjct: 235 DRLVRSHAK-VVDEAEKGWIRSKMDAFNIIENSYAYARELCDEAIAVIGD----DA--AL 287
Query: 311 MEVVDFCLQRLN 322
+++ ++R +
Sbjct: 288 RAIIETVIKRSH 299
>gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 304
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/339 (21%), Positives = 128/339 (37%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + + L+ + + E + D + Y + +GGKRLRP L + +
Sbjct: 6 DTFETRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + + A+E +H +L+H +DD LRRGK + + T++L GD
Sbjct: 66 AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF ++ ++ A + G ++ E +
Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E ++I+G R+ L+++G +G+AFQL DD+LD + MGK
Sbjct: 186 LQAMKTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSDAATMGK 245
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK T + R +
Sbjct: 246 ATGKDAARGKGT--------------------------------------LVALRGMEWA 267
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + + + A+ L P + L+ F R +
Sbjct: 268 ETQLREHVRDAEALLA--PYGARASILIAAAHFIADRKS 304
>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161]
gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
Length = 293
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y I +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKT 169
AF ++ E + ++L+ + ++N VT E+ + KT
Sbjct: 121 AFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVTIAKSALSGHDFDD----EILLKIADLIALREN 293
>gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis]
Length = 299
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/287 (18%), Positives = 101/287 (35%), Gaps = 5/287 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD
Sbjct: 7 ASSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNASLLIDD 66
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG A ++G + + +++ V+ EA+ + L G
Sbjct: 67 IEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTRQLLELHRG 126
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + E + + + LK LG+
Sbjct: 127 QGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQ---DLKPLLDTLGL 183
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD + K+ ED GK + P+I A + ++ + +
Sbjct: 184 FFQIRDDYANLSSREYSDNKSFCEDLTEGKFSFPIIHAIWSRPES--TQVQNILRQRTEN 241
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + + + T +A +R L + +SL
Sbjct: 242 TDIKRYCVDYLEKVGSFAYTRQTLRDLEAEAYRLIRELGGNPQLESL 288
>gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc kimchii IMSNU 11154]
gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc kimchii IMSNU 11154]
Length = 332
Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 10/312 (3%)
Query: 17 FLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71
IL + S E I ++ + + GK +RP LTL + + + + L ++
Sbjct: 21 QSILTEMSSSWHIGFEEIDHAIRSQLNA-GKLVRPALTLIFSRLTSESYNQSAISLGASV 79
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H ATL+HDD++D+S LRRG + + +G T+V GD+LL+ F ++ A +
Sbjct: 80 ELLHLATLIHDDIIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAANK 139
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV- 190
+ GEL Q N+D T Y IK KTA LF + + +
Sbjct: 140 LALTALQEILFGELLQKQNRYNIDTTFSAYFSQIKGKTAALFKLSATFGLVSGTDYSDEL 199
Query: 191 RQALKSYGMNLGIAFQLVDDV--LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ G N+GI FQL+DD + E +GK IG+D RNG T P++ A T
Sbjct: 200 FSTVSHLGENIGITFQLLDDYLDFESTKESLALGKPIGQDIRNGIYTAPILFALDD-TSV 258
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ IS E L ++ + A+ + Y KD + LP++ ++
Sbjct: 259 NTEIKTLLLKRDAISNEELTILHNLITSSNAITKLKALLTEYSDSLKDLITSLPNTQIQE 318
Query: 309 SLMEVVDFCLQR 320
L + L R
Sbjct: 319 QLEHLSQLLLTR 330
>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
Length = 303
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/343 (22%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A D+L +++ K L+E+ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFDALAHFGENA--KELVEISQFLLARTN 303
>gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536]
gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11]
gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536]
gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11]
gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1]
Length = 299
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLTEQSLDTSALEALADYIIQR 297
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
Length = 303
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L +++ K L+E+ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFEALAHFGENA--KELVEISQFLLARTN 303
>gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 747
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/304 (20%), Positives = 121/304 (39%), Gaps = 17/304 (5%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
V++LI GGK R A + L + E H +L+ DD+ D S++RR
Sbjct: 443 PVRFLIDRGGKCWRTFFLFACSNALSRDYADTSRCVIITELGHVGSLIIDDIEDGSSVRR 502
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQA---------------FCMVIETKSQEALEALSLVA 137
G AA + +G T++ G + + + +A A +
Sbjct: 503 GGKAAHVEFGTPTAINAGTACFFMSVPFADVSSLPAEKAKRFYELYFEMMKAAHAGQGLD 562
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+ + + E+ + KT + A + ++ V A++ +
Sbjct: 563 IRGLGYLMPDVVRTGETKALEDALKAIHTCKTGAICGAICSFACVLTDTSEEVTLAMEEF 622
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G+A+Q++DDVL +G + K GED R+GK T PV A + ++ S +
Sbjct: 623 GKAIGLAYQIIDDVLGVKGFEGNL-KEAGEDIRDGKITYPVAKAMGKLELPQRERIWSIL 681
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDF 316
N+ E +++A ++ + + A ++ + L PD+ K L + +
Sbjct: 682 NERTSDREKIEEALSLINSANVVDECVADARQLVEEEWKVVDPLIPDTVSKVMLRALCFY 741
Query: 317 CLQR 320
++R
Sbjct: 742 IIRR 745
>gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88]
gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88]
gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82]
gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034]
gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146]
gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252]
gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263]
Length = 299
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
Length = 306
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 75/326 (23%), Positives = 123/326 (37%), Gaps = 54/326 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN +L I + + ++Y GGKRLRP L AT M N A
Sbjct: 19 QRVNQALLDFIAPLPFGDSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLSLVNLDAPAA 78
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ E
Sbjct: 79 AIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEADMS 138
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + L + G+ L + A++ +A
Sbjct: 139 DVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQIHRHKTGALIRAAVR 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L Y +G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 199 LGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYP 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A Q+A +
Sbjct: 259 ALM--------------------------------------GLDCAKAKAMDLYQEALSA 280
Query: 298 LRCLPDSSWKKS-LMEVVDFCLQRLN 322
L L S+ + L + F ++R N
Sbjct: 281 LNILSAQSYNIAPLQALACFIIERDN 306
>gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
Length = 291
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/334 (20%), Positives = 126/334 (37%), Gaps = 60/334 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILK--RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L K++ V+ I + +I + + + Y SGGKR+R ML + A M
Sbjct: 2 MSKLSHY--KEL--VDNFINELAQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAADMFG 57
Query: 59 YRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LV 109
+ +A AIE +H +L+HDD V+D+ RRGK A V+G ++
Sbjct: 58 ADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNTY 117
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL---DVTEEDYLHVIK 166
+++ A + + + G++ + S++ ++ + K
Sbjct: 118 TFNVIADAPIDDARKVKIVKWLSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNFIHK 177
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L A++ ++ + L YG+ G+AFQ++DD LD G+ ++GK
Sbjct: 178 HKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEKLGKKKV 237
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
++ N T P + L +
Sbjct: 238 DEI-NNTLTYPKVY--------------------------------------GLKRSYDI 258
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A A ++ + S K L+++ ++R
Sbjct: 259 AQKLKDMAILQIKDIKGS---KELIDIAKLIVER 289
>gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 304
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/339 (21%), Positives = 127/339 (37%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + ++ L+ + + E + + Y + +GGKRLRP L + +
Sbjct: 6 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+H +DD LRRGK + + T++L GD
Sbjct: 66 AALLGGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF ++ ++ A + G ++ E +
Sbjct: 126 SLLTYAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E +LIA R+ L+++G +G+AFQL DD+LD + MGK
Sbjct: 186 LQAMKTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSDTATMGK 245
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + +
Sbjct: 246 ATGKDAARGKGTLVALH--------------------------------------GIEWA 267
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + + + A+ L P + +L+ F R +
Sbjct: 268 EEQLRQHVRDAEALLA--PYGARASTLIAAAHFIADRKS 304
>gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
Length = 297
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + K + S E I ++Y I +GGKRLRP L +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVILELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ ++ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+ +KAK+ + D K L+ + DF R
Sbjct: 263 NNTVKKAKEIIKDKFGDEKGK-ILISLADFIKDR 295
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
LE+ ++ + + K + D +Y + GGKR+RP+L+LA L
Sbjct: 14 LEEFQQAALQHIEACLEKLFPESHMPYQSLFDAARYSLLGGGKRIRPLLSLAVTQALTGT 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACA+E IHT +L+HDD+ RRGK + V+ ++L GDFLL+ AF
Sbjct: 74 FTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFLLTYAF 133
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAV 171
++ + A + + LVA + + +D++ + H+ ++KT
Sbjct: 134 EVLCSSPGLTAQQIVELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQHIHQTKTGA 193
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + A+E ++++G R L+ +G +G+AFQ++DDVLD + G ++ D +N
Sbjct: 194 LITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLDITSSHAKHGDSVASDLKN 253
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T +L + + A +
Sbjct: 254 NKTTYATLL--------------------------------------GVEKAQLLAQKHV 275
Query: 292 QKAKDSLRCLP 302
Q A L LP
Sbjct: 276 QTALAKLEKLP 286
>gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 300
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 56/337 (16%)
Query: 1 MKMLEDLTLKDM----EKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M+ + L + + + V I K + + E+I + +KY + +GGKRLRP+L T
Sbjct: 1 MRRYKMLFKEYLGMGKKLVEDGIDKYLGELTYPEVIAEGMKYAVLNGGKRLRPILLFMTL 60
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDF 112
+L + + A AIE IH+ +L+HDD+ D+ RRGK+ +G +L+GD
Sbjct: 61 DILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDA 120
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------V 164
LL+ AF ++ E S + E + + + + + + +
Sbjct: 121 LLTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYM 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT L +EV+ +IA R+ L Y +G+AFQ+ DD+LD G+ +GK
Sbjct: 181 HAHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFETIGKP 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G D + K T P IL + +++
Sbjct: 241 VGSDLEHDKSTYPSIL--------------------------------------GMAESK 262
Query: 285 YRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
++AK + + K L+++ D+ R
Sbjct: 263 KLLSETIEEAKSIIRARFGEERSKT-LLDLADYIGNR 298
>gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris
gallopavo]
Length = 299
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 109/285 (38%), Gaps = 5/285 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ I + +YL+ GK++R L+ A L D ++ E +H A+LL DD+ D+
Sbjct: 9 KRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIEDN 68
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S LRRG A ++G + + +++ V+ +A++ + L +G+
Sbjct: 69 SKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGLD 128
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ E + + + ++ ++ LK LG+ FQ+
Sbjct: 129 IYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQL---FSNYKKDLKPLLNTLGLFFQI 185
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD + + K+ ED GK + P I A +K E ++ + +++
Sbjct: 186 RDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW--SKPESTQVQNILRQRTENIDIK 243
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K + + T +A + L + +L+E
Sbjct: 244 KYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVE 288
>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
17629]
gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
Length = 307
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 129/337 (38%), Gaps = 61/337 (18%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ L+ E +N ++ K + ++ +I + + Y + +GGKRLRP+L T M
Sbjct: 13 MEELQQKV----EHINDVLEKFLPAEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMF 68
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
AIE IHT +L+HDD+ +D+ RRGK V+G +L GD LL+
Sbjct: 69 GGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLN 128
Query: 116 QAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEEDYLH 163
A+ + E + + + + S + +T E
Sbjct: 129 LAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDF 188
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ + KT L +++ + +++AG + ++ LG+AFQ+ DDVLD + +GK
Sbjct: 189 IYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGK 248
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+G D +N K T L
Sbjct: 249 PVGSDEKNNKATYVTFE--------------------------------------GLDKA 270
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A++ L L L E+ ++ + R
Sbjct: 271 VSDVERISKEAEEQLDDLGYDDA--FLKELFEYLIHR 305
>gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
Length = 304
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 64/335 (19%), Positives = 125/335 (37%), Gaps = 54/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
++ + + +E++ ++ + + + + ++Y GGKR+RP+L A L
Sbjct: 7 VESFAEFRQRRVERIEKVLDELLPPADILPGRLHEAMRYSTLGGGKRVRPLLVYAGGQCL 66
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IH +L+HDD+ +D+ +RRG+ + T++LVGD LL+
Sbjct: 67 GLADELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGDALLT 126
Query: 116 QAFCMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ E A + + + ++ L + +H+
Sbjct: 127 HAFQVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQMHLQ 186
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
K+ + + L + + SV AL Y +G+AFQ+ DD+LD G++ E GK
Sbjct: 187 KTGMLIRCALQLPLQAAAIAPDASVASALLRYADRIGLAFQVQDDILDEIGDIRETGKAR 246
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
R+ + ++ A +
Sbjct: 247 QGADRSRQKPSF---------------------------------VSLLGLTEAQRYAQR 273
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A D+L P + L + ++R
Sbjct: 274 LLED----ALDALS--PWGAEGDHLRALARLIVER 302
>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 321
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 115/320 (35%), Gaps = 55/320 (17%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + + ++Y GGKRLRP L + +A + + +L+ A+E IH
Sbjct: 44 DDLLPDEI-TRPRRLMEAIRYATLGGGKRLRPFLAVESAAVFGVERASALLVGAALECIH 102
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF ++ + +
Sbjct: 103 CYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIITRDEVHRDPQVR 162
Query: 134 SLVACTLAEGELRQLS----------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA + D D + + KT L +++
Sbjct: 163 LDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAIL 222
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD G+ +GK G D GK T L
Sbjct: 223 GEAPPEHYRALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQL--- 279
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A ++L
Sbjct: 280 -----------------------------------GIDGAKQRVRDLLVRADEALAPFG- 303
Query: 304 SSWK-KSLMEVVDFCLQRLN 322
K L F +R +
Sbjct: 304 --AKGDVLRAAARFVAERKS 321
>gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST]
gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST]
Length = 249
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IHTA+L+HDDV+D S RRGK + ++W Q GD++L+ M+ + +
Sbjct: 1 MISEMIHTASLVHDDVIDQSFARRGKPSVNVLWNQQQVAQAGDYILAVVSMMLARLQHND 60
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
LS + L +GEL QL + + Y KTA L + +L+ +++ GV
Sbjct: 61 VTLILSEILADLVQGELMQLDTKETENERFAHYFARSYRKTASLIANSLKAVAVLTGVGE 120
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ YG NLG+AFQLVDD+LD+ MGK D + G T PV+ A ++ +
Sbjct: 121 RTAEISFQYGRNLGLAFQLVDDLLDFVSSAEAMGKPAAVDLKLGLATAPVLFACEQFPEL 180
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ +G + ++A+ ++ + L T + A + +A+ S ++
Sbjct: 181 NAMIVRRFRGEG-----DTERAYELVHRSEGLEQTRFLARKHCAEARRLASQFDQSPYQH 235
Query: 309 SLMEVVDFCLQRL 321
+L+ V DF L R+
Sbjct: 236 ALVVVCDFVLNRM 248
>gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
Length = 289
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 77/318 (24%), Positives = 126/318 (39%), Gaps = 51/318 (16%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V K + + + I + + + SGGKRLR L L TA + + + A AIE
Sbjct: 13 VQAHFDKVLAAFEPLPIVEAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEA 71
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +D+ +RRG+ W + T+VL GD L + AF +V + + E
Sbjct: 72 LHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAE 131
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAVLFSAALEVSSLIA 184
+ +A +LA Q + + + + + + + A
Sbjct: 132 VRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGA 191
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + ALK Y LG+AFQ+ DD+LD G+ ++GK +G+D GK T +L
Sbjct: 192 RLAQADTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLL---- 247
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
L RA S +A DSL
Sbjct: 248 ----------------------------------GLDAARARAMSLIDEACDSLATY--G 271
Query: 305 SWKKSLMEVVDFCLQRLN 322
+ +L E F ++R +
Sbjct: 272 AKADTLRETARFVVRRTH 289
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/317 (21%), Positives = 132/317 (41%), Gaps = 49/317 (15%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + K +++ + + Y + +GGKR+RP+L LA A ++ + + AC +E I
Sbjct: 13 IEDFLQKLPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMI 72
Query: 75 HTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
HT +L+HDD+ D+ RRG+ V+G T++L GD LL+ F ++
Sbjct: 73 HTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPVPLERQ 132
Query: 133 LSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ ++ T + + + +++ ++ KT L +A++ + +++ G
Sbjct: 133 IKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGG 192
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L Y LG+AFQ+ DD+LD G + +GK +G D + K T P IL
Sbjct: 193 GLEEEIRQLSIYAAALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSIL----- 247
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + +AK +L + +
Sbjct: 248 ---------------------------------GMDGAKIQLKQKIIEAKTALEKFEEKA 274
Query: 306 WKKSLMEVVDFCLQRLN 322
+ L+ D+ R +
Sbjct: 275 --EFLLCFADYIETRNH 289
>gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2]
gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2]
Length = 299
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 120/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLQACVEQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSL 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 STLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L + +
Sbjct: 124 IISDAPMPEVTDRDRIAMISELAQASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRECLPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L + +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQAQNKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ A+ SL L S +L + D+ +QR
Sbjct: 266 LIEDARQSLSLLAAQSLDTSALEALADYIIQR 297
>gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [marine gamma
proteobacterium HTCC2143]
gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [marine gamma
proteobacterium HTCC2143]
Length = 208
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 2/207 (0%)
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
S+AF +++ + + ++ V T+AEGE+ QL+ + + D TE+ Y VI +KTAVLF
Sbjct: 2 YSRAFQLLVSIGNMPVMGLMADVTNTIAEGEVLQLTKAGDPDTTEDQYFQVITNKTAVLF 61
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+AA +++A + YG+NLGIAFQL+DDVLDY G +MGKN+G+D GK
Sbjct: 62 AAATAGGAILAQQDQTTVDNYYQYGLNLGIAFQLIDDVLDYEGNAADMGKNVGDDLAEGK 121
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PTLP+I A ++GT ++ + I + + E+++ I++ + AL T+ A ++
Sbjct: 122 PTLPLIYAMRKGTDQQAKLIRRAIENK--TNEDIEAVIAIVKHSGALTYTKDMAKTFSDN 179
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
AK L D+ + + L + + R
Sbjct: 180 AKFCLSGAKDTPYTQGLARLATLAVDR 206
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/335 (23%), Positives = 133/335 (39%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + K + S E I + ++Y I +GGKRLRP L T +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKKELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 EDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L ++E++ +IA V+ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRL 321
+ +KAK + + K L+ + DF R
Sbjct: 263 NNTVEKAKQIIKNKFGEEKGK-ILISLADFIKDRK 296
>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AB900]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSNTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L +++ K L+E+ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFEALAHFGENA--KELVEISQFLLARTN 303
>gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured
bacterium MedeBAC46A06]
Length = 344
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/313 (18%), Positives = 116/313 (37%), Gaps = 11/313 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E ++ I++R+ + + + + S GK LR + L+ A +L+ + A AIE
Sbjct: 30 EIIHDFIIERMPQAGQPLAEAAAHHFASPGKMLRAKMALSAADLLKVDRPAALHWAAAIE 89
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALE 131
+H A+L+HDD+ D LRRG+ A +G ++ +GD+L++ +F + +
Sbjct: 90 VLHNASLIHDDICDGDRLRRGRPAVWSQFGRDVALTLGDWLVALSFELAAEAAQRAQTPM 149
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ ++A + L + VT+ + A +
Sbjct: 150 LVKILATHMKTTTLGEAREFDLQPVTDWQHYLQGAGDKTAPLLTAPIEGVATMALHGGAA 209
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ + LG A+Q+ +D+L+ + G D P V+L +
Sbjct: 210 PTIGACFRALGNAYQIGNDILN--FSGRDGADTCGSDLGRRAPNGVVVLFRDYLDDSRRA 267
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS------S 305
+ G S + + +R +RA + R A LP
Sbjct: 268 DFDDWYRSG--SDDGFEDWLAALRTSRAPAEAARRMNMMLDDASRLSESLPAELSAVIRP 325
Query: 306 WKKSLMEVVDFCL 318
++ L +V +
Sbjct: 326 IQQLLQQVCLKSV 338
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 11/237 (4%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ +V + + + + ++ D ++Y + GGKRLRP+L LA + + + ACA
Sbjct: 22 LMRVEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACA 81
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IH +L+HDD +D+ LRRGK + +G ++L GD L + AF ++ +
Sbjct: 82 AELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEI 141
Query: 129 ALEALSLVACTLAEGELRQLSLSKN--------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + LA Q + + E + + KT L ++E+
Sbjct: 142 PAATQATLCRLLARAAGSQGMAGGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMG 201
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ V + AL+ YG +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 202 AACGNVSAAALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYV 258
>gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
Length = 272
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/311 (19%), Positives = 123/311 (39%), Gaps = 45/311 (14%)
Query: 13 EKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E + I + + ++ + ++Y + +GGKR+RP+L L + + V +A A+
Sbjct: 4 ETIERRIEELVKPHFNLLTESAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVAV 63
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E HTA+L+HDD+ D++ RRGK + +G ++L GD L AF + + + +
Sbjct: 64 ELFHTASLVHDDLPPIDNADFRRGKPSCHRAYGEGIALLAGDGLFFLAFSQIAKVREPKL 123
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
E S A L GE + + + + + S A + + +
Sbjct: 124 FEEFSETAYKLLLGEAMDVEFERQEKEISVEMVEKMYSFKTGALFAFCFSAPFLLKGLD- 182
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+K G G+AFQ+ DD+ D G + ++GK++G
Sbjct: 183 -HTFVKKLGEKFGVAFQIYDDLKDVLGSLEKLGKDVG----------------------- 218
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+++KK ++++ + + A Y ++ ++L
Sbjct: 219 ---------------KDVKKV-TLVKKMG-VQKAKQLADKYYEEVLEALESEGLHRTFDF 261
Query: 310 LMEVVDFCLQR 320
L + +R
Sbjct: 262 LRNLKKMVEER 272
>gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 747
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 64/306 (20%), Positives = 123/306 (40%), Gaps = 17/306 (5%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
V++LI GGK R A + L + E H +L+ DD+ D S++RR
Sbjct: 443 PVRFLIDRGGKYWRTFFFFACSNALSRDYADTSKCIIITELGHVGSLIIDDIEDGSSVRR 502
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQA---------------FCMVIETKSQEALEALSLVA 137
G AA + +G T++ G + + + +A A +
Sbjct: 503 GGKAAHVEFGTPTAINAGTACFFMSVPFAGVNSLPAEKAKRFYELYFEMMKAAHAGQGLD 562
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+ + + E+ + KT + A + ++ V QA++ +
Sbjct: 563 IRGLGYLMPDVVRTGETKALEDAVKAIHTCKTGAICGAICSFACVLTDTSEEVTQAMEEF 622
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G+A+Q++DDVL +G + K GED R+GK T PV A + ++ S +
Sbjct: 623 GKAIGLAYQIIDDVLGVKGFEGNL-KEAGEDIRDGKITYPVAKAMGKLELPQRERIWSIL 681
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDF 316
N+ E +++A ++ + + A ++ + L PD+ K L + +
Sbjct: 682 NERTSDREKIEEALSLINSANVVDECVADALQLVEEEWKVVDPLIPDTVSKVMLRALCFY 741
Query: 317 CLQRLN 322
++R +
Sbjct: 742 IIRRNH 747
>gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 293
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 16/270 (5%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
I S + + + +KY FSGGKR+R A N +A AIE IHT +L+
Sbjct: 19 SEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLI 78
Query: 81 HDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-------- 130
HDD+ LRRGK + + T++L GD L S F ++ +
Sbjct: 79 HDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIYKLKKVNIV 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
A + G+ + ++ + I + ++ + + +
Sbjct: 139 FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEF 198
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L +G+ FQ+ DD+LD E+GK G+D K T ++ K
Sbjct: 199 ETILTKVSDLIGLCFQIKDDILDVTRSTQELGKTSGKDINANKSTYVSLMGLDGANKYLF 258
Query: 251 NFWKSTIN------DGKISVENLKKAFIIM 274
+ +S +NL+K ++
Sbjct: 259 DKKNEIRKLLSELNKKNLSTQNLEKLIDLV 288
>gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
Length = 302
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 50/303 (16%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85
+ D +++ GGKRLRP+L A + ++ + + AIE IH +L+H +
Sbjct: 38 ARLYDAMRHAAIGGGKRLRPLLVQAACDLFHISRESALRVGLAIECIHVYSLIHDDLPAM 97
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DD +RRGK + T++L GD L AF ++ + ++ + LA
Sbjct: 98 DDDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEVLADAETHPDPFVRIELVKALATCSG 157
Query: 146 RQLSLSKNLDVTEEDYLHV--------IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+ E + KT L +E ++++A + R L Y
Sbjct: 158 PAGMAGGQMMDLEAERTRFDLATVTRLQNLKTGALICFCVEAAAIMARLPQEARTGLHGY 217
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
++G+AFQ+ DD+LD G+V GK +G+D GK T +L
Sbjct: 218 ARDIGLAFQIADDLLDVEGDVALAGKALGKDAAAGKETFVSLL----------------- 260
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ RA+ +AKD LR + L + D+
Sbjct: 261 ---------------------GVEAARERAHMLVDQAKDHLRS--HGAEADLLRAIADYI 297
Query: 318 LQR 320
++R
Sbjct: 298 VER 300
>gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/299 (21%), Positives = 107/299 (35%), Gaps = 51/299 (17%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSAL 90
+ Y + +GGKRLRPML T + G A+E IHT++L+HDD +D+ L
Sbjct: 38 AMDYSVRAGGKRLRPMLMEETYRLFGGNGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTL 97
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
RRG A + +G +VL GD LL + + S L + + +
Sbjct: 98 RRGLPTAWVKFGYDMAVLAGDGLLIYSMETAAKALSMTDRPDLVARCMGILAEKTGIHGM 157
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFS---------AALEVSSLIAGVQNSVRQALKSYGMNL 201
V E I + A++ + +L+ G + +++ L
Sbjct: 158 IGGQTVDVELAGKPIPKEKLHFIYRLKTGALLEASMMIGALLGGADERQLKLVENMASCL 217
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD +GK + D +N K T +
Sbjct: 218 GMAFQIQDDILDLTSSAEVLGKPVHSDEKNHKTTYVTLE--------------------- 256
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + ++A L LP + + L ++ + R
Sbjct: 257 -----------------GIKKAKQDVEMISEEAISCLHELPGQN--EFLEALIRMLVNR 296
>gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 111/290 (38%), Gaps = 8/290 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ +++ + YL+ + GK +R L A L+ D ++ I+ +H A+LL DD+
Sbjct: 14 EDKLLLEPFTYLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNASLLLDDIE 73
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D LRRG +R ++G +++ ++++ A VIE A + S L G+
Sbjct: 74 DSGILRRGIPVSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSEQLLELHRGQG 133
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
++ N E + + A + + +S LG+ F
Sbjct: 134 MEIYWRDNYQCPTEKEYRQMCIRKTGGLFALG---VRLMQLFSSEEGNYIQLVELLGLYF 190
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + M K ED GK + P++ A + + + I
Sbjct: 191 QIRDDFAGLVMDEYHMSKGFAEDLTEGKFSFPLVHAITENEED--HQILNIIRKCTSDDA 248
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ ++ +L T+ KA+ + L + L+ ++D
Sbjct: 249 VKRHCISLLESFGSLDYTKLALSDLDAKARAEIERLGGNP---ILIGLLD 295
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 77/335 (22%), Positives = 133/335 (39%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + K + S E I ++Y I +GGKRLRP L T +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------S 167
AF ++ + + + + + + + I
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA ++ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRL 321
+ +KAK+ + + K L+ + DF R
Sbjct: 263 NNTVEKAKEIIKNKFGEEKGK-VLISLADFIKDRK 296
>gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217]
gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217]
Length = 293
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 127/331 (38%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
ML ++V+ ++ ++ + D + Y GGKR+RP L A ML+
Sbjct: 1 MLAQAIELYQQRVDIVLKNKLEQLDDCAPELKDAMTYGALMGGKRIRPFLVYAIGQMLKV 60
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRGK + + ++L GD L S A
Sbjct: 61 PLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTVHIAFNEAQAILAGDALQSLA 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD--------VTEEDYLHVIKSKT 169
F ++ E+++ + + LA+ Q + + KT
Sbjct: 121 FELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAIDLAATNKAIDLAQLTQLHNKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L S A+E++ ++A R L + LG+AFQ+ DD+LD E+GK G D
Sbjct: 181 GALISCAVELAIILADASPVERAHLAQFSHALGLAFQVQDDILDVTVSTQELGKPQGSDE 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K T P +L L + +A
Sbjct: 241 QANKSTFPKLL--------------------------------------GLAAAQAQATE 262
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Q+A +L LP + + + + + + R
Sbjct: 263 LVQQALSALEELPYN--TQLIADFARYIITR 291
>gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
Length = 368
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/355 (18%), Positives = 112/355 (31%), Gaps = 47/355 (13%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL---------IFSGGKRLRPMLTLATALMLEY-RGDN 63
+V I I + ++ + + SGGK LR D
Sbjct: 13 RVQQAIDAHIQGSRAALAEIGDDIAPLVDSVSRLLSGGKGLRASFLYWGYRAAGAADSDA 72
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL--------VGDFLLS 115
V L+ ++EF A LLHDDV+D S RRG +A + G+
Sbjct: 73 LVRLSASMEFFQAAALLHDDVMDRSDTRRGMPSAHRAVADLHRSRGWAGDDARFGEGAAI 132
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL---DVTEEDYLHVIKSKTAVL 172
A + + + L ++ + + +
Sbjct: 133 LAGDLCLTWCDELFSTCGLPAEDLARGRGAFDLMRTQLMGGQFLDLLESARGWDGLDLEA 192
Query: 173 FSAALEVSSLIAGVQNSVRQALKS-----------------YGMNLGIAFQLVDDVLDYR 215
A+ + ++ L YG+ LG AFQL DD+L
Sbjct: 193 RIASARNVIRYKSAKYTIEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDLLGVY 252
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ GK G+D R GK T+ V LA +++ +S + + + + I
Sbjct: 253 GDPEATGKPAGDDLREGKRTVLVALALDLAGDADRDVVESLLGREDLDEAGVHRLRGIFA 312
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLP---------DSSWKKSLMEVVDFCLQRL 321
++ A+ E +A ++L D L ++VD R
Sbjct: 313 DSGAVEQVERMIQRRVAEAHEALDRARQQTAGPQALDGDALAVLDDLVDASTARQ 367
>gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
Length = 306
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 121/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFSQQLAAHQQRVNQALLDFIAPLPFGNSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SPTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L E+
Sbjct: 129 FSILAQAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLEDLERIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGAFAAGEQGRKALTLLDRYSEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAKTKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L + S+ + L + F ++R N
Sbjct: 271 RDLYQEAICALNALSEQSYNTAPLQALACFIIERDN 306
>gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
DSM 45100]
Length = 389
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/371 (19%), Positives = 129/371 (34%), Gaps = 53/371 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-------VEMIPDV---VKYLIFSGGKRLRPMLTLA 52
L VN + + + + + + I GGKR+RP A
Sbjct: 19 ALHAPLSAVPAAVNHRLNQYLSASLQEFWGINPLFTQAIEVMGDFIVGGGKRVRPTFAWA 78
Query: 53 TALML----EYRGDNH---------------VLLACAIEFIHTATLLHDDVVDDSALRRG 93
+ A EFI L+HDD+VD S RRG
Sbjct: 79 GIRAGLESSGTSTAKASSRSQEEPTELANGFLSAISAFEFIQACALIHDDIVDQSDTRRG 138
Query: 94 KVAARLVWGNQT----------------SVLVGDFLLSQAFC-----MVIETKSQEALEA 132
+ ++L+GD L+ A + + + A
Sbjct: 139 HPTVHREFERHHRDRKWLGSSEHYGISQAILIGDLALAWADDLLLDSGLSTQRLHQCRHA 198
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVR 191
+ + G++ +++ + + VIK KTA A V + +AG +
Sbjct: 199 WRAMRTEVIGGQILDIAVEASGTENVDHAWDVIKYKTASYTVARPLHVGAALAGASEELI 258
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L++ G ++G+AFQL DD L G+ GK G+D R GK T+ + A + GT+ +
Sbjct: 259 EFLRTIGEDIGVAFQLRDDQLGVFGDPAVTGKPSGDDLRTGKRTVLIDSALEMGTEAQAT 318
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSL 310
+ + + ++ + I+R++ A E ++A + S + L
Sbjct: 319 QLREGLGN-VTDEADVDELRSIIRDSGAAAHIETLITQKSERAIAHIHEAGLSKELTEEL 377
Query: 311 MEVVDFCLQRL 321
+R
Sbjct: 378 ENYARRLTERS 388
>gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555]
gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555]
Length = 293
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + E+++ + + + I D ++Y + +GGKR+RPML L T M
Sbjct: 2 EIKRVFKSLKEELDIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNK 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL++A
Sbjct: 62 DYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTA 170
++ + A+ + + + N+ ++ + ++ KT
Sbjct: 122 MSIMFRHCIGKGENAIRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTG 181
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ A++ +++ A LK YG LG+AFQ+ DD+LD G+ +GK D
Sbjct: 182 AIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKKTKSDLN 241
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
N K T + R + K + +
Sbjct: 242 NDKTTFVTVYGLDRCDRMCSEITKECMEILNEIEGD 277
>gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 123/324 (37%), Gaps = 54/324 (16%)
Query: 13 EKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN + ++ + + ++Y GGKRLRP L AT ML A
Sbjct: 12 QRVNAALQGFISQLPFQSSPLVNAMEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRG+ + +G ++++L GD L + AF ++ +
Sbjct: 72 AIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEESAILAGDALQTLAFSILADAPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L+ E A++ SA
Sbjct: 132 GVMAESRIAMLSELAQASGVAGMCGGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL + +G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALTAGESGRAALPALDRFANAIGLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A+ Q++ D+
Sbjct: 252 ALM--------------------------------------GLDNARIKAWDLCQESLDA 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + F ++R
Sbjct: 274 LDTLAAQSYNTTALRALASFVIER 297
>gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 287
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M ++ K +N + ++ SD +++ Y + +GGKRLRP+L LAT L
Sbjct: 1 MTTFKEFQAKYTPIINDFLEGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDALG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ V AC IE IHT +L+HDD+ +D+ RRG++ + WG ++L GD L
Sbjct: 61 VEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQP 120
Query: 116 QAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + L + + G+ + + N D +EE H+ KT L
Sbjct: 121 LGIQWIAQAEHNWKLVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ +A N Q ++ + G ++QL DD++D E GK +D G
Sbjct: 181 ILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVG 240
Query: 233 KPTLPVI 239
K +
Sbjct: 241 KNNSLTM 247
>gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
bacterium EB0_39F01]
gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine
bacterium EB000_55B11]
gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 335
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/321 (19%), Positives = 123/321 (38%), Gaps = 14/321 (4%)
Query: 7 LTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
LT + VN LIL R+ + + + + + GK LR + + +A + E
Sbjct: 18 LTHNKLPSVNHVHELILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDIST 77
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+L A A+E +H A+L+HDD+ D RRG+ + + +G T++ +GD+L++ +F + E
Sbjct: 78 SLLWAGAVEVLHNASLIHDDICDGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASE 137
Query: 124 TKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ ++A +A Q D I + A
Sbjct: 138 AAEMSNTPRLVGVLARHMATTTAGQAMEFGWNSTQSWDVYLKIAADKTAPLLTAPIHGVT 197
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ + + A+ Y +LG A+Q+ +D+ +++G R +
Sbjct: 198 LMSGTSGLGFAISGYFCDLGKAYQIANDIQNFKGTDGAKLIAGDLARRAPNAVTVSFVES 257
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ ++LK + ++A+ + R A+ ++ LP
Sbjct: 258 LNEQDHNEFTIWY----NNSDNKDLKLWRDKILASKAIEISSVRMLKILNAAERNINTLP 313
Query: 303 DSSWKKSLMEV--VDFCLQRL 321
+L V V ++R+
Sbjct: 314 SI----ALEAVVPVHTIIKRV 330
>gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895]
gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/332 (21%), Positives = 121/332 (36%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L+ + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLQACVEQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGRMFGVSL 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 STLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L+ E
Sbjct: 124 IISDAPMPEVADRDRIAMISELANASGIAGMCGGQALDLAAEGKQVPLEALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGENGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARNKARD 265
Query: 290 YGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQR 320
+ A+ SL L D S +L + D+ +QR
Sbjct: 266 LIEDARQSLTQLADLSLDTSALEALADYIIQR 297
>gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
Length = 280
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+L + + + + + D E + D V+++ SGGKR+RPM+T+ + ++
Sbjct: 2 ELLERRRALIEERLHEVVDGVDPETLSDEVRHVTLSGGKRVRPMVTILACETVGGTAEDA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V IE +H A+L+ DD++D S LRRG +A +G +++ D LL +AF +
Sbjct: 62 VEFGVGIELVHNASLVIDDIIDRSELRRGTESAWAEFGYGPAIITSDGLLGEAFDLFASD 121
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A+ +V ++ E + + + + EE+Y+ + + KT LF AA E+ ++ A
Sbjct: 122 PD-----AMRVVTESMVELGVGEATELSAMPSNEEEYMTLARRKTGALFRAAAELGAIAA 176
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+AL Y +GIAFQ+ DDVLD + E+GK G D +P++ +
Sbjct: 177 DSDAVTVEALGEYAERVGIAFQIRDDVLDAVADAEELGKPTGHDAEMDRPSVVQVTDLTP 236
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ ++ + ++ D
Sbjct: 237 EEANARARAEADRALEALDRVDVA----------------------------------DP 262
Query: 305 SWKKSLMEVVDFCLQR 320
+ + L E+ +F ++R
Sbjct: 263 TAEGYLRELAEFVVER 278
>gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
Length = 331
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 75/339 (22%), Positives = 127/339 (37%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + K+ L++ + + E + + Y + +GGKRLRP L +
Sbjct: 33 DTFETRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVAES 92
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+H +DD +RRGK + + T++L GD
Sbjct: 93 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 152
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF +V ++ + G ++ E +
Sbjct: 153 SLLTYAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDETGIIR 212
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E ++IAG RQ L+++G +G+AFQL DD+LD + MGK
Sbjct: 213 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAATMGK 272
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + +
Sbjct: 273 ATGKDAARGKGTLVALH--------------------------------------GMEWA 294
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + + A+D L P + +L+ F R +
Sbjct: 295 ETELRRHVRDAEDLLA--PYGARASTLIAAAHFIADRKS 331
>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 297
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 131/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + + + S E I ++Y +GGKRLRP L AT +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KS 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA ++ R+ L+ Y +G+AFQ+ DD+LD G E+GK +G
Sbjct: 181 KTGKLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEELGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMEESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+KAK+ + D K L+ + DF R
Sbjct: 263 NDTVEKAKEIIKNKFRDEKGK-VLISLADFIKDR 295
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/313 (18%), Positives = 111/313 (35%), Gaps = 67/313 (21%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ VN + I + I ++Y + GGKR+ P++ ++ ++ + + + CA+
Sbjct: 6 KSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAV 65
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+ DD +D+ +RRGK + +G A
Sbjct: 66 EMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESELARSIGSQGLVAGQ---------- 115
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
LS + ++ E + +K L A+ + +++ G +
Sbjct: 116 ---------------FLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSE 160
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L+ +G +G+ +Q+VDD+LD E+GK G+D K T P ++
Sbjct: 161 QMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVTYPKLV--------- 211
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + A A D L S
Sbjct: 212 -----------------------------GIEKSREFAEKLNGDAWDMLSEFDQEKA-AS 241
Query: 310 LMEVVDFCLQRLN 322
L+ +V+F R N
Sbjct: 242 LLAMVNFATYRQN 254
>gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 382
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/316 (23%), Positives = 113/316 (35%), Gaps = 32/316 (10%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GGKRLRP + ++E I L+HDD++D S+ R
Sbjct: 65 FVLGGGKRLRPTFAWWGWRGAGGDPGSDHAQAVLTAVASLELIQACALVHDDLMDASSTR 124
Query: 92 RGKVAARLVWGNQTSVLV----------------GDFLLSQAFCMVIE------TKSQEA 129
RG+ + + + GD A M + A
Sbjct: 125 RGRPTVHVEFARTHAANDWSGPPARFGAAVAILVGDLAQVWADDMFHSAALPDGAHGRAA 184
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++ LA L L+ + A L + + IAG +
Sbjct: 185 EPWRAMRTEVLAGQYLDVLAQASGDTAESTALQIDRFKTAAYTVERPLHLGAAIAGAEPQ 244
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV----ILAFQRG 245
V A + YG ++G+AFQL DD+L G+ GK G+D R GK TL V A QRG
Sbjct: 245 VVNAYRRYGADIGVAFQLRDDLLGVFGDPRVTGKPAGDDLREGKRTLLVAAGLQRAEQRG 304
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
+ + D + + L +A + E A+ E R + A D+L P
Sbjct: 305 DPAAHEAITAALGDPGLPDDALDRARSALAELGAVQAVEQRIAALTGSALDALDAAPVAE 364
Query: 305 SWKKSLMEVVDFCLQR 320
+ L E+ + +R
Sbjct: 365 PGRAHLFELAERATRR 380
>gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis C231]
Length = 372
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/362 (19%), Positives = 115/362 (31%), Gaps = 48/362 (13%)
Query: 5 EDLTLKDME-KVNFLILKRICSDV-------EMIPDVVKYL---IFSGGKRLRPMLTLAT 53
LT ++E V + E + VV YL + GGKR+RP A
Sbjct: 13 RSLTFSEIEPAVEHKLRAFFQGRARKISVIGEPVSRVVTYLEDFVLGGGKRIRPSYAWAG 72
Query: 54 ALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L + + ++E I L+HDD++D S RRG+
Sbjct: 73 FLAGNGLEGTEDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACH--- 129
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--- 165
+ + A + L ++++ + VI
Sbjct: 130 RDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIARTSNAWRGMRTEVIGGQ 189
Query: 166 ----------------------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
A L + + IAG + AL+ YG ++G+
Sbjct: 190 LLDVFLESAGSESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGV 249
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--- 260
A+QL DD+L G+ GK G+D R GK T+ V A + + +I G
Sbjct: 250 AYQLRDDLLGVFGDPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVGR 309
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQ 319
++ +R+ A E R ++ L S + L+ +
Sbjct: 310 VTDPHDIACLADTIRKTGAEAGVEKRIDELAERGISHLNTADISEDARSVLVSLAHKATA 369
Query: 320 RL 321
R
Sbjct: 370 RS 371
>gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis 1002]
gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis I19]
Length = 393
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/362 (19%), Positives = 115/362 (31%), Gaps = 48/362 (13%)
Query: 5 EDLTLKDME-KVNFLILKRICSDV-------EMIPDVVKYL---IFSGGKRLRPMLTLAT 53
LT ++E V + E + VV YL + GGKR+RP A
Sbjct: 34 RSLTFSEIEPAVEHKLRAFFQGRARKISVIGEPVSRVVTYLEDFVLGGGKRIRPSYAWAG 93
Query: 54 ALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L + + ++E I L+HDD++D S RRG+
Sbjct: 94 FLAGNGLEGTEDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACH--- 150
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--- 165
+ + A + L ++++ + VI
Sbjct: 151 RDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIARTSNAWRGMRTEVIGGQ 210
Query: 166 ----------------------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
A L + + IAG + AL+ YG ++G+
Sbjct: 211 LLDVFLESAGSESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGV 270
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--- 260
A+QL DD+L G+ GK G+D R GK T+ V A + + +I G
Sbjct: 271 AYQLRDDLLGVFGDPAVTGKPAGDDLREGKRTVLVAKALELAHAADNADAVESIRKGVGR 330
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQ 319
++ +R+ A E R ++ L S + L+ +
Sbjct: 331 VTDPHDIACLADTIRKTGAEAGVEKRIDELAERGISHLNTADISEDARSVLVSLAHKATA 390
Query: 320 RL 321
R
Sbjct: 391 RS 392
>gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
marinum M]
gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
marinum M]
Length = 340
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 30/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I D + ++ + SGGKRLRP+ + E + +LL A+E +H
Sbjct: 9 AYIGDDYGALTAWLEEFVLSGGKRLRPIFAYRGWQAVTTEDPDPDLLLLFSALELLHAWA 68
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQT---SVLVGDFLLSQAFCMVIETKSQEALEALSL 135
L+HDDV+D S+ RRG+ A + + + L + ++I +Q + +
Sbjct: 69 LIHDDVIDASSTRRGRPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIIS 128
Query: 136 VACTLAEGELRQLSLSKNLDVTEED----------------------YLHVIKSKTAVLF 173
+ Q + + +
Sbjct: 129 RVSQSSLSPDAQRRVQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTV 188
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
S L++ + A + V++A +G +LG+AFQL DDVL G+ GK G+D R+GK
Sbjct: 189 SRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGK 248
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T+ + A + + + +++ + + ++ AL E R
Sbjct: 249 RTVLIAEAAALADRSDPKAANLLRSAVGSELTDSQVGELREVIVRVGALAAAENRIAGLT 308
Query: 292 QKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
++A +L +P ++ K L + R
Sbjct: 309 RRALATLESIPINASAKAGLSALARTATDRS 339
>gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 293
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 16/270 (5%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
I S + + + +KY FSGGKR+R A N +A AIE IHT +L+
Sbjct: 19 SEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLI 78
Query: 81 HDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-------- 130
HDD+ LRRGK + + T++L GD L S F ++ +
Sbjct: 79 HDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIYKLKKVNIV 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
A + G+ + ++ + I + ++ + + +
Sbjct: 139 FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEF 198
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L +G+ FQ+ DD+LD E+GK G+D K T ++ K
Sbjct: 199 EAILTKVSDLIGLCFQIKDDILDVTRSTQELGKTSGKDINANKSTYVSLMGLDGANKYLF 258
Query: 251 NFWKSTIN------DGKISVENLKKAFIIM 274
+ +S +NL+K ++
Sbjct: 259 DKKNEIRKLLSELNKKNLSTQNLEKLIDLV 288
>gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 287
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M ++ K +N + ++ SD +++ Y + +GGKRLRP+L LAT L
Sbjct: 1 MTTFKEFQAKYTPIINDFLEGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDALG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ V AC IE IHT +L+HDD+ +D+ RRG++ + WG ++L GD L
Sbjct: 61 VEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQP 120
Query: 116 QAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + L + + G+ + + N D +EE H+ KT L
Sbjct: 121 LGIQWIAQAEHNWKLVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ +A + Q ++ + G ++QL DD++D E GK +D G
Sbjct: 181 ILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVG 240
Query: 233 KPTLPVI 239
K +
Sbjct: 241 KNNSLTM 247
>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
Length = 313
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/330 (21%), Positives = 119/330 (36%), Gaps = 61/330 (18%)
Query: 14 KVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V+ + + S + + ++Y + GGKR+RP L AT M + + A A
Sbjct: 20 RVDEKLKNFIQPLPSHSRQLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSLDVAAAA 79
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+HDD+ LRRG+ + + +G ++L GD L + AF ++ +
Sbjct: 80 VECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQPMPN 139
Query: 129 ALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + + G+ L+ A++ +A
Sbjct: 140 VTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALIRAAVRI 199
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ L Y +G+AFQ+ DD+LD GE + MGK G D + K T
Sbjct: 200 GALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGETDRMGKQQGADQQRNKSTYSS 259
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L L + +A + Q A+ +L
Sbjct: 260 LL--------------------------------------GLEGAKIKAKKFCQDAQIAL 281
Query: 299 RCL--------PDSSWKKSLMEVVDFCLQR 320
L S +SL + F +QR
Sbjct: 282 DSLASQSLQDSGASYDTRSLRALALFIIQR 311
>gi|255017999|ref|ZP_05290125.1| hypothetical protein LmonF_10200 [Listeria monocytogenes FSL
F2-515]
Length = 205
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
GEL Q+ S ++VT +YL I KTA LF+ + + + + G L
Sbjct: 28 MGELDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYL 87
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ++DDVLDY +GK + D + G +LP+I A + F
Sbjct: 88 GMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK---GHLAEFEPLLSQKLD 144
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ E ++ ++ + + + A Y KA ++ LP ++++ + + L R
Sbjct: 145 MTDEASEQVLALISKYKGVEQAFKLAKKYTNKALREIKKLPAGAYREDMYRLTKNILDR 203
>gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVA 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDHYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 304
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/337 (21%), Positives = 123/337 (36%), Gaps = 59/337 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D + ++ + + + S+ + + ++Y GGKR+RP+L A +
Sbjct: 6 QFQDWVIAHSQRAESALDRLLDSEKTIPHRLHEAMRYAAQGGGKRIRPLLVYAAGQLGNS 65
Query: 60 RGDNHVL--------LACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLV 109
+ A AIE IH +L+H +DD LRRG+ + T++LV
Sbjct: 66 INEQADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDEATALLV 125
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LH 163
GD L ++AF ++ K + + A A G +
Sbjct: 126 GDALQTRAFEILANAKCDANIRLAMISALAAASGSRGMAGGQAIDLESVGKKLDLDGLKQ 185
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L S A + + AG+ + L Y LG+AFQ+VDDVLD + +GK
Sbjct: 186 MHAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDATADSQTLGK 245
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D KPT ++ L
Sbjct: 246 TAGKDAAANKPTYVTLM--------------------------------------GLDYA 267
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +A + + A SL+ S +L ++ + R
Sbjct: 268 QKQAKTLQETASASLKEFGSKSA--ALKDLALLVVNR 302
>gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
Length = 348
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/334 (18%), Positives = 128/334 (38%), Gaps = 20/334 (5%)
Query: 2 KMLEDLTLKD--MEKV-NFLILKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATAL 55
K + ++ KD + + + + I + +I GGKR+RPML + A
Sbjct: 12 KNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPAIEIINRGGKRIRPMLMILLAH 71
Query: 56 MLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
L Y +N ++ +E H+ +L+ DD+ D + RRGK + L++G S+ +
Sbjct: 72 ALGYNNSDTENLYKISMLLELPHSGSLIIDDIEDGALKRRGKPSIHLIYGLDNSINTANL 131
Query: 113 LLS-----QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ + ++ E L G+ ++L + + +
Sbjct: 132 IYFLPAKLIQTSNLKTSQKLIIYENFFTTLSNLHLGQGIDITLHNGTYIPSIEEYISLVE 191
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ I + + L + +N+G FQ++DD+ + + GK+ G+
Sbjct: 192 HKTSSLFGMAGFLAGILTNNENKAKNLYNTFLNIGTYFQMIDDIKNIK--DGVKGKDFGD 249
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII---MRENRALVDTE 284
D GK +LP+I + K + + + +K + + A+ ++
Sbjct: 250 DLIEGKKSLPIIYFLREKNFDNKIIHELAKIKNQPIDKVKEKILQFSNMINSSNAIQNSS 309
Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
A SY K + L + +K ++++V
Sbjct: 310 ILATSYLNKFIEELNSYKLINKYKDMIIKLVTKI 343
>gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
proteobacterium HTCC2255]
gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
proteobacterium HTCC2255]
Length = 335
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/310 (18%), Positives = 120/310 (38%), Gaps = 11/310 (3%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
V+ LIL R+ + + + + + GK LR + + +A + E +L A A+E +
Sbjct: 29 VHELILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWAAAVEVL 88
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-L 133
H A+L+HDD+ D RRG+ + + +G T++ +GD+L++ +F + E +
Sbjct: 89 HNASLIHDDICDGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASEAAEMSNTPRLV 148
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
++A +A Q D I + A + + + A
Sbjct: 149 GVLARHMATTTAGQAMEFGWNSTQSWDVYLKIAADKTAPLLTAPIHGVTLMSGTSGLGFA 208
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ Y +LG A+Q+ +D+ +++G R + +
Sbjct: 209 ISGYFCDLGKAYQIANDIQNFKGTDGAKLIAGDLARRAPNAVTVSFVESLNEQDHNEFTI 268
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
++LK + ++A+ + R A+ ++ LP +L V
Sbjct: 269 WY----NNSDNKDLKLWRDKILASKAIEISSVRMLKILNAAERNINTLPSI----ALEAV 320
Query: 314 --VDFCLQRL 321
V ++R+
Sbjct: 321 VPVHTIIKRV 330
>gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2]
gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2]
Length = 314
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/335 (22%), Positives = 125/335 (37%), Gaps = 62/335 (18%)
Query: 9 LKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVL 66
+ +V + + + + + ++Y + GGKRLRP+L LA +
Sbjct: 21 QNHLAQVEQALSQWVGHGAPAGLGEAMRYAVLDGGKRLRPLLVLAAYQAVCSGQPAPCAW 80
Query: 67 LACAI-------EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A E IH +L+HDD +D+ LRRGK A + +G ++L GD L + A
Sbjct: 81 HDAAALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKPTAHVRFGPARALLAGDALQAFA 140
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKT 169
F ++ + + LA +TE + + KT
Sbjct: 141 FELLTPEDMPIPAATQAALCRLLARAAGSTGMAGGQAIDLASVGLRLTEGQLRQMHRLKT 200
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ + ++ + +AL YG LG+AFQ+VDD+LD + +GK G+D
Sbjct: 201 GALLQASVLMGAVCGQAAPAAYRALSDYGAALGLAFQVVDDILDVVADSATLGKTAGKDA 260
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
KPT +L L + +A
Sbjct: 261 IAAKPTYVSLL--------------------------------------GLERAQAQARE 282
Query: 290 YGQKAKDS-L-RCLPDSSWKKSLMEVVDFCLQRLN 322
A + L LPD+ ++L + D L R +
Sbjct: 283 LLAGAHAARLRSDLPDT---RALAALADMVLSRPS 314
>gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
Length = 295
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M++V I + I D + + + + SGGKRLR L L A + LLA
Sbjct: 1 MQRVEREIERLIKEIDYDEVTRLFN--MLSGGKRLRAKLILKIA----PEHEKAPLLAAI 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+D+S RRG + G++T+V++GD L S+AF ++ +
Sbjct: 55 VELIHGASLLHDDVIDESITRRGVASVNATDGSKTAVMLGDILYSKAFTELV----EFDR 110
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +A ++ ++ K D ED + + + A +
Sbjct: 111 DIAKSIASSVTALSKGEMQDVKMADEFNEDEEKYLDMLYLKTATLIEAAAYASALLVGKD 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
YG NLG++FQ++DD+LD + +GK DF GK TLP I +++ ++K
Sbjct: 171 ADKYGVYGKNLGLSFQIIDDILDITADSATLGKPAMNDFVEGKCTLPYIYLYKKLNDQDK 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
KS+ I + M+E++++ + A +A L D + L
Sbjct: 231 KRLKSSHAKY-IDESEVLWIKQKMQEHKSVESSFELAKKLSNEAM--LAVKDD----QEL 283
Query: 311 MEVVDFCLQRL 321
++++ ++R
Sbjct: 284 IDILQTMIKRS 294
>gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 294
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/320 (20%), Positives = 119/320 (37%), Gaps = 53/320 (16%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ + D+ ++ +KY + S GKR+RP L AT +L ++ A AIE
Sbjct: 15 ELEKWLETLGHPDLSLV-QAMKYSLLSEGKRVRPFLVYATGQILGSAVEDLDTAAAAIEC 73
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMV 121
IHT +L+H +DD LRRG + + T++L GD L + AF
Sbjct: 74 IHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAILAGDALQTLAFTILSEGKLSPKAE 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ A + A + G+ L+ + + ++ +A +
Sbjct: 134 KNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLNQLEAIHVNKTGELIKAAVKLGAL 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + L Y +G+AFQ+ DD+LD + + +GK G D + K T P +L
Sbjct: 194 SCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSDTDTLGKPQGSDIKANKSTYPSLL- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L ++ +A + + A SL +
Sbjct: 253 -------------------------------------GLKGSQTKAQNLLEDALRSLDSI 275
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
P + L + + ++R
Sbjct: 276 PH--ETQILEDFARYVIERK 293
>gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
Length = 377
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 82/356 (23%), Positives = 142/356 (39%), Gaps = 36/356 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD-------VEMIPDVVKYLI--FSGGKRLRPMLTLAT 53
+E L ++M V+ ++ + + + I + YL+ SGGKRLR L
Sbjct: 22 AIETLWAENMLGVDAVLNRHVHARGRRLADIDPDIAPLADYLVRALSGGKRLRAAFCLWG 81
Query: 54 AL--MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------ 105
A V A AIE H L+HDDV+D S RRG + ++
Sbjct: 82 ARGAAGGDLPAGAVDAAAAIELFHLGALIHDDVMDHSDRRRGMPTVHRRFADRHTADGLA 141
Query: 106 -----------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
++ D +L+ A Q A SL+ G+ +
Sbjct: 142 GDPEAFGQAVAILAGDLCLMWSDEVLADAVSAASPEIGQRARAVWSLMRDETVGGQYLDM 201
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ V+ K+A A + +AG + + A +S G+ G AFQL
Sbjct: 202 LAQATPTTSLTRTRLVLHYKSAKYTVAQPLRLGGALAGADDDLLDAYESLGLIAGEAFQL 261
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+L G+V GK + +D R GK TL V +A +R ++ + ++ + ++ ++L
Sbjct: 262 RDDLLGVFGDVATTGKPVIDDIREGKRTLLVAVASERADPAQRLLLERSLGNPHLTDDDL 321
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
++ + A+ E R +A ++ LP D + +L +V C+ R +
Sbjct: 322 VAVGRVLHDTGAVRHVEDRIDDLAAEALAAVETLPVDDVCRNALARLVSRCIWRDS 377
>gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFSQQLAAHQQRVNQALLDFIAPLPFGESDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A AIE IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + A
Sbjct: 69 SLTALDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + + A A + + G+ L E
Sbjct: 129 FTILAEAEMPDVADKDRLAMVAELAHASGVAGMCGGQALDLEAEARQISLAELEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L S+ + L + F ++R N
Sbjct: 271 MDLYQEALSALNALSAQSYNIAPLQALACFIIERDN 306
>gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 350
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/344 (19%), Positives = 124/344 (36%), Gaps = 32/344 (9%)
Query: 2 KMLEDLTLKD---MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML- 57
++L + + V+ + E + + V + GKRLR
Sbjct: 16 EVLHRFVADEADLLAAVDP----ALAPVAERLEEAV-----AVGKRLRAAFCYWGWRATR 66
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----LVWGNQTSVLVGDFL 113
+ D + A ++E +H A ++HDD++DDS LR G+ A +
Sbjct: 67 QPDSDALLRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALGAAVRHHPRAADAARS 126
Query: 114 LSQ--------------AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L+ A + A + +A L GE ++ + T
Sbjct: 127 LAMLVGDLLMSLAGQLFATSGLPAAYLGRARPLWAALARDLIAGECLEILHTGGAPDTAA 186
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ L + +AG +R+ +YG+ LG AFQL DD+L G+ +
Sbjct: 187 SLKVIRYKTAKYTVEQPLLIGGALAGAGERLREGFSAYGLPLGEAFQLRDDLLGLFGDPH 246
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK +D R +PT + ++ E+ ++ + + + L+ +MR +A
Sbjct: 247 RTGKANADDVRGHRPTALLAETWRIAGPDERERLRALLGRDDLGEDGLEDVREVMRRLKA 306
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
E + Q+A +L L +L + RL+
Sbjct: 307 PDRVESMIAARVQEALGALHELDVPVPAAGALTALAHSAAVRLS 350
>gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase
[Taeniopygia guttata]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/285 (17%), Positives = 107/285 (37%), Gaps = 5/285 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ I + +YL+ GK++R L+ A L D ++ E +H A+LL DD+ D+
Sbjct: 9 KRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDDIEDN 68
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S LRRG A ++G + + +++ V+ +A++ + L +G+
Sbjct: 69 SKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGLD 128
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ E + + + ++ ++ LK LG+ FQ+
Sbjct: 129 IYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQL---FSNYKKDLKPLLNTLGLFFQI 185
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD + + K+ ED GK + P I A + ++ + +++
Sbjct: 186 RDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIK 243
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K + + T +A + L + +L++
Sbjct: 244 KYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVQ 288
>gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016]
gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 298
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + E+++ + + + I D ++Y + +GGKR+RPML L T M
Sbjct: 7 EIKRVFKSLKEELDIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNK 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A AIE IHT +L+HDD+ +D+ LRRGK ++G ++L GD LL++A
Sbjct: 67 DYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEA 126
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTA 170
++ + A+ + + + N+ ++ + ++ KT
Sbjct: 127 MSIMFRHCIGKGENAIRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTG 186
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ A++ +++ A LK YG LG+AFQ+ DD+LD G+ +GK D
Sbjct: 187 AIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKKTKSDLN 246
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
N K T + R + K + +
Sbjct: 247 NDKTTFVTVYGLDRCDRMCSEITKECMEILNEIEGD 282
>gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
Length = 280
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 6/268 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++V + + + D ++ ++Y + GKRLR L A A ACA+E
Sbjct: 8 DRVEHALERALPHDESLLTKAMRYSTLNAGKRLRAALIYAVAEDFSLPLSLVDNAACALE 67
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+HDD+ +D+ LRRGK + + T++L GD L + AF ++ +
Sbjct: 68 CIHAYSLIHDDLPAMDNDDLRRGKASCHKAFDEATAILAGDALNTLAFALLARDEKNGLA 127
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNS 189
+ L A A + L + + L +I K L +AAL + +L +
Sbjct: 128 QIRCLSAAAGAMVCGQSLDMIYTGTAIDVQKLQIIHQKKTGALLTAALHLGALPSPDYAH 187
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L + G ++GIA+Q++DD+LD + +GK G+D + K T +
Sbjct: 188 YQTQLTAIGEHIGIAYQIIDDMLDATSDSQTLGKTAGKDAQQLKNTYMNFFSPANIQSLI 247
Query: 250 KNFWKSTINDGKISV---ENLKKAFIIM 274
+ + T + L ++
Sbjct: 248 AHHEQCTRQQLNALPNCGQQLSAVIDLI 275
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 57/323 (17%)
Query: 15 VNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD------NHV 65
+ ++ + + + + ++Y + GGKR+R L A +
Sbjct: 19 IEQVLETLMPAADIAPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAIEASMD 78
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A+E IH +L+HDD +DD LRRG+ + + T++L GD L AF ++
Sbjct: 79 RAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLAG 138
Query: 124 TKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
AL + A G L S +T ++ + KT + +A++
Sbjct: 139 MPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMKTGAMLAASV 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++AG ++VRQAL +Y +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 199 TLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTAGKDAVENKPTYV 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L A A +
Sbjct: 259 SLL--------------------------------------GLEPARELAEELRLAAHQA 280
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L L DS + L ++ DF + R
Sbjct: 281 LGPLGDSGAR--LAQLADFIVLR 301
>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
Length = 297
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 133/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + K + S E+I ++Y +GGKRLRP L AT +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKKELKELSYPEIIAKGMEYATLNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KS 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMKESKKIL 262
Query: 288 YSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+KAK+ + + + K L+ + DF R
Sbjct: 263 NDTVEKAKEIIKNKFGEKTGK-ILISLADFIKDR 295
>gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
Length = 308
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/319 (21%), Positives = 111/319 (34%), Gaps = 53/319 (16%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ L+ I + + + ++Y +GGKRLRP L + +A + +L A+E IH
Sbjct: 31 DQLLPDEI-ARPRRLMEAIRYSSLAGGKRLRPFLVVESAAVFGVPRGAALLAGAALECIH 89
Query: 76 TATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+L+HDD+ LRRG+ + + T++L GD LL+ AF ++ +
Sbjct: 90 CYSLIHDDLPAMDNSELRRGRPTLHRAYDDATAILAGDALLTLAFDIITRDEIHSDAGVR 149
Query: 134 SLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LA + + D D + + KT L +++
Sbjct: 150 LALTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGAIL 209
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+AL YG LG AFQ+ DD+LD G+ +GK G D K T L
Sbjct: 210 GQATKEQTKALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALNKTTFVTQL--- 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + R +A +L
Sbjct: 267 -----------------------------------GIDGAKKRVRDLLARADKALLIF-- 289
Query: 304 SSWKKSLMEVVDFCLQRLN 322
L F +R N
Sbjct: 290 GEKGDVLRAAARFVAERKN 308
>gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQPNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQ------------EALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ + ++ L+ + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ++DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L D K+ L+++ F L R N
Sbjct: 263 LEQAKSYAKELHDQAFEALAHFGD-DAKE-LVDISQFLLARTN 303
>gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
Length = 289
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 51/320 (15%)
Query: 14 KVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + + + + + Y + +GGKR+RP L A A A+
Sbjct: 10 QVEQALETFMNRLEAPDRLREAMLYSLDAGGKRVRPALIYAVLDAYGVDRKTGDATAAAL 69
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+H +DD +RRG+ + + T++L GD LL+ AF ++ET +
Sbjct: 70 EMIHTYSLIHDDLPAMDDDDMRRGRPTNHIEFDEATAILAGDALLTNAFTCLLETMAAAE 129
Query: 130 LE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ A + A + G+L + + E+ + + KT L A+E +
Sbjct: 130 VKVKLLERLAAAAGAAGMVGGQLDDMLGERGGISDAEELESIHRRKTGALLIFAVEAGGI 189
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AGV + + LK YG +LGIAFQ+ DD+LD G+ +++GK +G D N K T P +L
Sbjct: 190 LAGVADEDLEQLKRYGRHLGIAFQIQDDILDVTGDADKIGKPVGSDEGNDKATYPKLL-- 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + + A +++ L
Sbjct: 248 ------------------------------------GLDGAKRALAAQVTAANEAIEAL- 270
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
S L +++DF ++R +
Sbjct: 271 -SVEATPLKDLLDFVVKRDH 289
>gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 15/247 (6%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L++L V+ + + D ++ + Y + +GGKRLRP LT+A A +L
Sbjct: 3 RQLQELVA----VVDDYLATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGK 58
Query: 60 -RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D+ V ACA+E IHT +L+HDD+ +D+ LRRGK V+G + L GD LL+
Sbjct: 59 TIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTL 118
Query: 117 AFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF V + + + + + + +++ + + KT
Sbjct: 119 AFEWVSDNQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTG 178
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ LIA + +V L ++G G+AFQ+ DD+LD EMGK +D
Sbjct: 179 ALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTATTAEMGKATHKDQA 238
Query: 231 NGKPTLP 237
K T P
Sbjct: 239 EQKNTYP 245
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 15/247 (6%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L++L V+ + + D ++ + Y + +GGKRLRP LT+A A +L
Sbjct: 3 RQLQELVA----VVDDYLATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGK 58
Query: 60 -RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D+ V ACA+E IHT +L+HDD+ +D+ LRRGK V+G + L GD LL+
Sbjct: 59 TIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTL 118
Query: 117 AFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF V + + + + + + +++ + + KT
Sbjct: 119 AFEWVSDNQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTG 178
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A+ LIA + +V L ++G G+AFQ+ DD+LD EMGK +D
Sbjct: 179 ALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTATTAEMGKATHKDQA 238
Query: 231 NGKPTLP 237
K T P
Sbjct: 239 EQKNTYP 245
>gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis]
Length = 477
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 123/314 (39%), Gaps = 29/314 (9%)
Query: 17 FLILKRICSDVEMIPD-VVKYLIFSGGKRLRP--------MLTLATALMLEYRGDNHVLL 67
I++ I + ++ D V+ + G RP + + + R +
Sbjct: 181 AEIVEMIHT-ASLLHDDVIDHSDTRRG---RPSGNIAFTNKMAVLAGDFMLGRATVAISR 236
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E + + ++V+ ++ A + + ++
Sbjct: 237 LRNPEVVELVSNSIANLVEGEFMQLKNTAIDADHT----------TFNNGTQHIPPPPTK 286
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
L T + QLS + +D+ + YLH KTA L S + +++++GV+
Sbjct: 287 FELTEHEYRVPTSSTTNGTQLSHDQLVDMAFDYYLHKTYLKTAALISKSCRAAAVLSGVR 346
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + + +G NLGI FQLVDD+LD+ ++GK G D G T PV+ A++
Sbjct: 347 DPIIEECYEFGKNLGICFQLVDDMLDFTISAKDLGKPAGADLELGIATAPVLFAWREDPS 406
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
I + +++ A + +++ + T A Y KA +L LP+S
Sbjct: 407 LGP-----LIKRNFSNPGDVEAAALAVKKYDGVGKTNELAKDYCNKALQNLRNGLPNSDA 461
Query: 307 KKSLMEVVDFCLQR 320
+ +L + + L R
Sbjct: 462 RSALEFLTNSVLTR 475
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L +M + I+ I S ++ + Y + GK++RPML L + L
Sbjct: 50 SLVSNEMNTLAKNIVTLIGSGHPLLNRISGYYFEAEGKKVRPMLVLLLSRALS 102
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E VN + + + + + V+Y + +GGKR+RP+L +A ++ + ACA+
Sbjct: 75 ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT++L+HDD +D++ LRRGK V+G +VL GD LL+ AF + S
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 130 LEALSLVAC------------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ A + V E + KTA L AA
Sbjct: 195 APERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G + L+ Y +G+ FQ+VDD+ D E+GK G+D GK T P
Sbjct: 255 VLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTEELGKTAGKDVMAGKLTYP 314
>gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
Length = 288
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + S+V + ++ Y + +GGKRLRP+L LAT L Y+
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYK 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKENAKVIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 321
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALML-EYR 60
L + + V ++ + + ++ ++Y + S GKR+R +L+L + +
Sbjct: 7 LNASFSEKLRSVEEVLHDSMTTFTKL--KSIEYAKKMLSSGKRIRALLSLLSFALCKNAD 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A IE IH ATL+HDDVVD++++RRGK + + GN+ SVL GDFLLS AF +
Sbjct: 65 TNAEIRAAATIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFEI 124
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E K+ + LS A L+EGE+ QL + E + ++ + +A
Sbjct: 125 ILECKNLSVVLLLSKTAKQLSEGEMLQLQSIGE--IVSESEYLEVIARKTAVLFSAAAEI 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ I + L+ G +G+AFQ+ DDVLD GE E+GK++G DFR K TLP ++
Sbjct: 183 AAILTGKQEYVVILREIGFLIGMAFQITDDVLD-YGEPQEVGKSVGNDFRECKFTLPCVI 241
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A++ + + + +++++A M E AL A Y KA+ L
Sbjct: 242 AYRDAKSKAAKKFWREVF--FTEEKDIQEARFFMYEVDALAKAMEVARKYLSKAEKKLSI 299
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + ++ + + +R
Sbjct: 300 FENGASLLTMKTFLRYAAER 319
>gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
Length = 296
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/327 (18%), Positives = 119/327 (36%), Gaps = 54/327 (16%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
E +L + + + ++Y + GGKR+RP+L A + + A A+
Sbjct: 8 FEWFAEKMLPQTGIGAKRLVGAMRYSLLGGGKRIRPLLCYAAGAVSGAPEEVLDRAALAL 67
Query: 72 EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH+ +L+HDD+ LRRG+ + +G ++L GD L ++AF ++
Sbjct: 68 EMIHSYSLVHDDMPSMDNDTLRRGRATTHVRYGEAMAMLAGDALQTEAFTVLSSPSVPPE 127
Query: 130 LEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + ++ K + + S
Sbjct: 128 AAQRLVQTLARAAGVWGMCGGQALDLEMVGQKPGAAELSRMQAMKTGAMIMAAVLMGAQS 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + + + L +Y LG+AFQ+VDD+LD + +GK G+D ++ KPT +L
Sbjct: 188 GIWTALGDQAKAGLAAYADALGVAFQVVDDILDCTQDTMTLGKTAGKDAKDDKPTWVSLL 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + RA + + A+ +L+
Sbjct: 248 --------------------------------------GLDGAKARAKALEEDAEKALQL 269
Query: 301 LPDSSWKKS-----LMEVVDFCLQRLN 322
L + L E+ + ++R +
Sbjct: 270 LAADPAVPAGAEARLREIALYVVRRTH 296
>gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_33]
gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_33]
Length = 326
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 148/321 (46%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M+E L K +E++ LI + V+ ++ GK R L L A +
Sbjct: 1 MIEILLKKWIEQIKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSN 59
Query: 59 --YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F EA+ LS + GE+ Q D++E Y I+ KTA LF AA
Sbjct: 120 IFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISENKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +G + Q L+ + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQNYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSEITVYLEKMLN 320
>gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
Length = 296
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 136/336 (40%), Gaps = 58/336 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
ML + + V + + + E + + ++Y + +GGKR+RP+L + E
Sbjct: 1 MLREYLEDKKKIVEGNLKELLGNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICDLFE 60
Query: 59 YRG----DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112
D +A A+EFIH +L+HDD+ +D+ RRGK+ + VLVGD
Sbjct: 61 KNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDV 120
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL++AF ++ +KS + +++ + + +D+ E+ I + +
Sbjct: 121 LLTEAFGIIANSKSLGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTLKYIH 180
Query: 173 FS-------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
AA+E+ + +++ R+ + Y LGIAFQ+ DD+LD G E+GK
Sbjct: 181 AHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK- 239
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D +N K T P I L ++
Sbjct: 240 SNDAQNEKTTYPSIF--------------------------------------GLEKSKK 261
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
Y +KAK + + + +E+ D+ R
Sbjct: 262 LLQEYLEKAKKIIEN--EFEGNQLFLELTDYFGNRK 295
>gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1]
gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 118/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRATVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 337
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 4/285 (1%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GGK +RP L L +A + + A A+E +H +LLHDD++D RR +
Sbjct: 51 GGGKAVRPALALLSAQAAGAPAETGLPGAVAVELVHNFSLLHDDLMDGDEERRHRRTVWT 110
Query: 100 VWGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
+WG ++L GD LL+ A A L+ L G+++ ++ + V
Sbjct: 111 LWGASGAILTGDALLALAQEVLLDCGLPTGAAAARLLARTTRDLIRGQVQDVAFERRAHV 170
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
E+ + + KT L SA+ + +++AG + AL YG +G+AFQL DDVL G
Sbjct: 171 PIEECVDMAAGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTDDVLGIWG 230
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ GK++ D R K +LPV A +G G+ L++A ++
Sbjct: 231 DPAVTGKSVHSDLRARKKSLPVTYALNQGGTVSVELATWLSAPGEPDEAELRRAADLVAA 290
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
A + +LR + D++ + L+ + F + R
Sbjct: 291 AGGRDWATAEAARRMALGEAALRGVDLDAAARDELIALGHFVVDR 335
>gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278]
gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS278]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/331 (21%), Positives = 115/331 (34%), Gaps = 62/331 (18%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
E+ L+ + + + + + + ++Y GGKRLRP L + +A +
Sbjct: 17 EETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGA 76
Query: 65 VLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
++ A+E IH +L+HDD+ LRRG+ V+ + T++L GD LL+ AF ++
Sbjct: 77 LMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIIT 136
Query: 123 ETKSQEAL----------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + V L + D D V + KT L
Sbjct: 137 RDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGAL 196
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+L+ + +AL YG LG AFQ+ DD+LD G+ +GK G D G
Sbjct: 197 LRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELG 256
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T L + + R
Sbjct: 257 KTTFVTQL--------------------------------------GIEGAKQRVRDLLA 278
Query: 293 KAKDSLRCLPDSSWK-KSLMEVVDFCLQRLN 322
+ +L K L F +R +
Sbjct: 279 RGDAALSIFG---AKGDVLRAAAHFVAERKS 306
>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 50/304 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLH--DD 83
+ + + Y + SGGKR+RP + A ++ +CA+E +HT +L+H
Sbjct: 38 ISELQNAYLYSLASGGKRVRPAILYFAAQCVGGGHCESLDQASCALELVHTYSLIHDDLP 97
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+DD +RRGK + + T++LVGD L ++AF ++I+ + A + + +V
Sbjct: 98 AMDDDDMRRGKPSLHKAYEESTAILVGDGLQARAFELLIDAPNLTAEQKIRMVKVLAEAA 157
Query: 144 ELRQLSLSKNLDVTE-------EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
L+ + + +D+ ++ + KT L A+L + + A AL
Sbjct: 158 GLKGMVGGQYIDIQVTGADITLDELQAMHSMKTGALIRASLALGGIAANATEEQLAALDE 217
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
YG ++G+AFQ+ DD+LD G+ +GK G+D KPT +L
Sbjct: 218 YGTHIGLAFQVADDILDVEGDAETLGKTQGKDAEANKPTYVKLL---------------- 261
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
L + A + A ++L +S+ L ++ +
Sbjct: 262 ----------------------GLEGAKAEAQRLLKAALEALSDFGESA--DHLRDLARY 297
Query: 317 CLQR 320
++R
Sbjct: 298 IVER 301
>gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter
gallaeciensis BS107]
gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
2.10]
gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
2.10]
gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter
gallaeciensis BS107]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/315 (21%), Positives = 118/315 (37%), Gaps = 48/315 (15%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ + R+ D + ++Y + +GGK LR L L +A + + A AIE
Sbjct: 27 RITTHMDARLGGDDA-LHAAMRYAV-TGGKMLRGFLVLESARLHGVAEAAALEAALAIEC 84
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----MVIETKSQ 127
IH +L+H +DD LRRG+ W +VL GD L + AF I +
Sbjct: 85 IHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELLADPRIGPHAL 144
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L+ + + L ++ D + + ++ A +
Sbjct: 145 TLIRGLAQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNRKTGCLISWSATAGAVMA 204
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L+ Y LG+AFQ+ DD+LD G+ ++GK + +D GK T +L
Sbjct: 205 GADEAPLRRYADALGLAFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLL------- 257
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
L + RA + ++A D+L P
Sbjct: 258 -------------------------------GLDAAKKRAKTLMEQACDALT--PYGDAA 284
Query: 308 KSLMEVVDFCLQRLN 322
++L + F + R +
Sbjct: 285 ETLKDTARFVISRDS 299
>gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323]
gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
Length = 288
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + S+V + ++ Y + +GGKRLRP+L LAT L Y+
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYK 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/328 (20%), Positives = 122/328 (37%), Gaps = 59/328 (17%)
Query: 14 KVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
V + + + + D +++ + +GGKR RP L +A + D + A
Sbjct: 14 AVEGFLAECLTEQQANGTPPRLADALRHAVLAGGKRFRPFLVFESAGLFGVARDAALPAA 73
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IH +L+HDD+ +D+ LRRG+ + T++LVGD L + AF + + +
Sbjct: 74 AALECIHCYSLVHDDLPAMDNDELRRGQPTVWKAYDEWTAILVGDALQAIAFELTSDPRR 133
Query: 127 QEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ EA + + + G++ L + D +++ +
Sbjct: 134 HDDAEARAELTHALAIASGAIGMVGGQMLDLEAGRLPDQPAATIADIVRLQAMKTGRLIT 193
Query: 178 EVSSLI---AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ S R ALK+YG +LG AFQ+ DD+LD G ++GK G+D GK
Sbjct: 194 VGCEMGAILGRASPSDRAALKTYGEHLGTAFQISDDLLDAEGSAADVGKATGKDAAAGKA 253
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T ++ + + A
Sbjct: 254 T----------------------------------LIGLL----GIQEARQHLDRTIDAA 275
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L D+ + L+ QR +
Sbjct: 276 VAALEPF-DTKA-EPLIAAARHMGQRDS 301
>gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 291
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDRWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAMAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G + + + KT L
Sbjct: 123 LLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLP 237
T P
Sbjct: 243 STYP 246
>gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
Length = 289
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/319 (21%), Positives = 121/319 (37%), Gaps = 50/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + E+ + ++Y + GGKRLR L L +A + + V A +I
Sbjct: 12 ARVQARLDAALADREELPVVHAMRYAVQ-GGKRLRGFLVLESARLHGIVPEAAVSAAASI 70
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG W T+VL GD L + AF ++ + A
Sbjct: 71 EALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPA 130
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LV + L + LD+ + + + +
Sbjct: 131 EVRIRLVETLAKASGAEGMVLGQALDIAAETAAVPLTLEQITHLQAGKTGALICWSAEAG 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + + L+ Y LG+AFQ+ DD+LD G+ ++ GK + +D GK T +L
Sbjct: 191 AILGQADTGPLRRYATALGLAFQIADDILDVEGDADKAGKRLQKDAEAGKATFVSLL--- 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + RA + ++A+ +L P
Sbjct: 248 -----------------------------------GLEGAKARARALVEEAEAALA--PY 270
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+L+E F + R +
Sbjct: 271 GPEAGTLIEAARFVISRES 289
>gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
Length = 316
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/328 (23%), Positives = 126/328 (38%), Gaps = 54/328 (16%)
Query: 10 KDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ + + + + D + + ++Y + GGKRLRP+L A A ++ V
Sbjct: 28 DRLARTESALSQWVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAG 87
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
CA+E IH +L+HDD +D+ LRRGK + +G +++L GD L + AF +++
Sbjct: 88 CAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPD 147
Query: 127 QEALEALSLVACTLA------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
Q +L A G+ L+ + A+L +
Sbjct: 148 QAGSMPDALQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHA 207
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ L ++ GV QAL YG LG+AFQ+VDD+LD + +GK G+D N KP
Sbjct: 208 SVLMGAACKEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKP 267
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T +L + S
Sbjct: 268 TYVSLLGLDQARAHADELCALAHAALARS------------------------------- 296
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
LPD+ ++L + D + R +
Sbjct: 297 -----GLPDT---RALAALADMVVSRTH 316
>gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627]
gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/332 (21%), Positives = 117/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L A M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYAIGQMFGVSL 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 STLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + L + G+ L E
Sbjct: 124 ILSDADMPEVSDRDRLAMISELANASGIAGMCGGQALDLDAEGKQVPLEALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL L S +L + D+ +QR
Sbjct: 266 LIDDARQSLSQLAEQSLDTSALEALADYIIQR 297
>gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str.
Paraca]
Length = 211
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D++ + + + + + ++ ++L GKR+RP + L + +
Sbjct: 7 LFSTVEADLKLLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S LRRG ++ N+ +VL GDFL +Q+
Sbjct: 67 IPKHRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWY 126
>gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE
PC73]
gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas
albilineans]
Length = 293
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 62/322 (19%), Positives = 120/322 (37%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V + + + + + +++ GGKR+RP+L A+ + A
Sbjct: 12 QRVEAGLDAHLPAIAQAPQRLHAAMRHATLGGGKRMRPLLVYASGALFGTDPARLDAPAL 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + + T++L GD L S AF ++ + +
Sbjct: 72 AVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQSLAFELLAKADAA 131
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVS 180
+A + + + + LD+ D + KT L A++ +
Sbjct: 132 DATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHALKTGALIRASVRLG 191
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L G ++ L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 192 ALGGGADHAALNHLDAFASALGLAFQIRDDILDVEASSEQLGKTAGKDATQAKSTYP--- 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + + + +DSL
Sbjct: 249 -------------------------------ALL----GMDGAKAKLAELAHTMRDSLHD 273
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ L + + R +
Sbjct: 274 Y--GAHADPLAALAQLAVDRAH 293
>gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 263
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 118/265 (44%), Positives = 161/265 (60%), Gaps = 2/265 (0%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
V ++ ++ Y++ +GGKRLRP+L L A L H+ LA IEFIHTATLLHDDVVD
Sbjct: 1 VPLVENIGHYIVDAGGKRLRPLLVLLVAGALGPIRQEHITLAGIIEFIHTATLLHDDVVD 60
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S+LRRG+ A WGN SVLVGDFL S+AF +++E S + ++ T+AEGE+
Sbjct: 61 ISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLLVELGSMPLMSLMADTTNTIAEGEVL 120
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
QL+ + + EE Y VI+SKTAVLF+AA E +++++G + YG+NLG AFQ
Sbjct: 121 QLTKAGDPATDEEAYFSVIESKTAVLFAAATEGAAILSGASTEDAARWRRYGLNLGNAFQ 180
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
L DDVLDY G+ +MGKNIG+D GKPTLP+I Q GT ++ I D +
Sbjct: 181 LADDVLDYLGDPEKMGKNIGDDLAEGKPTLPLIRTLQVGTPADQILVSQAITDRDATA-- 238
Query: 267 LKKAFIIMRENRALVDTEYRAYSYG 291
+ + + AL T RA +Y
Sbjct: 239 IAEIVAAVTRCGALDYTLQRAETYA 263
>gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 365
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 64/316 (20%), Positives = 109/316 (34%), Gaps = 35/316 (11%)
Query: 40 SGGKRLRPMLTLATALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GGKRLR + + V A+E A LLHDDV+D S RRG+
Sbjct: 48 GGGKRLRAAFAYWSFRAHGGADAGPEREAVVRTGAALELFQAAALLHDDVMDASDTRRGQ 107
Query: 95 VAARLVWGNQT-----------------------SVLVGDFLLSQAFCMVIETKSQEALE 131
A + + ++ +++A + +++
Sbjct: 108 PTAHRAFEARHATAGWAGEPVRFGESAAILLGDLCLVATQREIAEALAPLPRERAEAVRA 167
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS------KTAVLFSAALEVSSLIAG 185
A + + G+ + + + T+ L V +LIAG
Sbjct: 168 AFDTMQSEVIVGQYLDVLVQAEPWGLDPHADEERARAVIRAKTTSYSVRQPLVVGALIAG 227
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ A+ + G+ LG AFQL DDVL G+ GK G+D R GK T+ G
Sbjct: 228 ATPAQVAAVAAVGLPLGEAFQLRDDVLGVFGDPEVTGKPAGDDLREGKRTVLAARTMAAG 287
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
++ + D ++ +++ + + AL E A L +
Sbjct: 288 DAAQRALLAERLGDAHLTDDDVAALREAVVASGALAGVEALIAELADDAISRLEAADLAA 347
Query: 305 SWKKSLMEVVDFCLQR 320
K L+E+ + R
Sbjct: 348 PGKDVLLELAHAAVDR 363
>gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
Length = 316
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 147/301 (48%), Gaps = 6/301 (1%)
Query: 12 MEKVNF--LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVL 66
+E+V ++ + V++ + + GK R L L A + E + +
Sbjct: 2 IEQVKQYMHLIADYSKKETEVGAVLEDALNASGKMFRTKLLLFCASLGPCYEEKKEKLCK 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +E H A+L+HDD+VDDS RRGK++ + +G +V GDFL+++ + +
Sbjct: 62 LAAMVELTHLASLIHDDIVDDSPYRRGKISIQGKYGKDAAVYAGDFLMARIYYYEAVERL 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E+ LS + GE+ Q DV+ E+Y I+ KTA LF A + ++ AG
Sbjct: 122 NESAALLSKTVEHMCTGEIGQDLCRYREDVSVEEYFQNIQGKTAALFETACHIGAMEAGC 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + LK +G NLG+ FQL DD+LD+ ++E+GK +DF+NG T PVI+A Q+
Sbjct: 182 SQEMIEKLKLFGRNLGMMFQLKDDILDFTSNIDEIGKETHKDFQNGIYTFPVIMALQQEQ 241
Query: 247 KREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ + N G + + K + E R + T S +K K L+ + +
Sbjct: 242 AKKILYPIMEKNKGHRLDDAEITKMESCVLEYRGVEATYQEIQSLSKKNKQILQEIKGNQ 301
Query: 306 W 306
Sbjct: 302 E 302
>gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
20098]
gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
20098]
Length = 359
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 73/348 (20%), Positives = 131/348 (37%), Gaps = 40/348 (11%)
Query: 10 KDMEKVNFLILKRIC--SDVEM---IPDVVKYLIFS----------GGKRLRPMLTLATA 54
D + I+ + S + M +P+ ++++ + GGKRLR +L LA
Sbjct: 6 ADRSNIESRIVSLVDKWSAMPMEAEMPEACRHVVDAVSRQATSSSEGGKRLRALLMLAAY 65
Query: 55 LMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL------------ 99
+ D + +ACA+E TA L+HDD++DDS LRRGK +A
Sbjct: 66 DAFDGHADTRNAMLDVACALEVFQTAALVHDDIIDDSDLRRGKPSAHRALETDTGSPAIG 125
Query: 100 ------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153
+ +V + + A + L V + + ++
Sbjct: 126 RGLGLMLGDLLATVCIDIVNEAAALLPHATALTSAFLNMQREVEIGQILDLAVEQAPLQD 185
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ L+V + KTA + A + R+ + G LG+AFQL DD+
Sbjct: 186 AEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQARERALAIGKPLGLAFQLEDDL 245
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
+D G GK +G D R GK T+ + A ++ + S ++ +A
Sbjct: 246 IDVIGSSRATGKPVGGDIREGKRTVLLADAIAHADCAARDELIAMFEASSRSESDVSRAI 305
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFC 317
+ + A+ + R + ++ ++R L + L F
Sbjct: 306 GLFQSTGAVERSRQRIGALWDESVQAIRECKLEQNHETALLETCARFV 353
>gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 299
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVT 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
RM3195]
gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
RM3195]
Length = 297
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIF--SGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M++++ +I + +E+ + + ++ + GK+LR L L+ A +L
Sbjct: 1 MQEIDKIIQNYL---LELAYEPILTMLSKTNTGKKLRSKLLLSIA----GESQKAYVLCA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF + + +++ +
Sbjct: 54 IIELIHLASLLHDDIIDESELRRGARSINAEFGAKNALMLGDILYSKAFYELSKQEAKIS 113
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ V LA GEL ++LSK + +E YL +I KTAVL A+ +L+A + +
Sbjct: 114 QILSNAVCK-LAIGELMDVNLSKKFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLNEN 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
A YG NLG+AFQ+VDD+LD G+ +GK DF+ GK TL I ++ + +
Sbjct: 173 ---AFAEYGKNLGLAFQIVDDILDITGDEATLGKPALSDFKEGKTTLAYIYLYESLNEND 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K K+ ++ E +E + + +A YG + ++ ++ +
Sbjct: 230 KKILKNLFKK-DLNKEERLWLKQKFKEKNIIEQSIKKAKEYGNLSLKAI----ENDKNEK 284
Query: 310 LMEVVDFCLQR 320
L ++ + R
Sbjct: 285 LEAIIKTLIDR 295
>gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
Length = 295
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 132/334 (39%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ K E+V ++ + ++ + + + + Y + +GGKRLRP+L T +
Sbjct: 2 TFKEELAKRSEEVQAVVYAYLPAEEGFQKTLLEAMNYSMTAGGKRLRPLLMQETYRLFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G AIE IHT +L+HDD+ +D+ RRGK +V+G ++L GD LL+ A
Sbjct: 62 NGKVVEPFMAAIEMIHTHSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDGLLNYA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE--------DYLHVIKS-K 168
+ + E A T+ + + V + + L I K
Sbjct: 122 YETACRAFALEPGNPHIGEAMTVLTTKTGVYGMLGGQAVDVQSVGGTLSREKLDFIYRLK 181
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T+ L ++ +++AG + + ++G+AFQ+ DD+LD E+GK G D
Sbjct: 182 TSALIECSMMTGAILAGASEEEIRTIGQVASDVGLAFQIQDDILDVTSTSQELGKPTGSD 241
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
RN K T + L +
Sbjct: 242 ERNHKTTYVTVE--------------------------------------GLDKAKADVA 263
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A +L LP + + L E++ + R N
Sbjct: 264 AVSERAVCTLARLPQKN--EFLKELIGALVTRRN 295
>gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668]
gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668]
Length = 322
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 119/305 (39%), Gaps = 52/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87
+ ++Y +F GGKRLRP+L A +++ + ++ IE IH +L+ DD+ +D+
Sbjct: 58 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------ 141
LR G++ + T++L D L+SQAF + E + + +
Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVALMRELASSIGPSGL 177
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSY 197
G S + + + + KT L AA+ + L V +A+ Y
Sbjct: 178 TGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGVELGAAWRAVSEY 237
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G LG+A+Q+VDD+LD + +GK G+D R K T +L
Sbjct: 238 GERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVL----------------- 280
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
L + A +A +L + L ++V+
Sbjct: 281 ---------------------GLDASRAWARQLADEAWAALAPFG-GQAR-FLRKLVERV 317
Query: 318 LQRLN 322
L RL+
Sbjct: 318 LHRLS 322
>gi|41053321|ref|NP_956329.1| geranylgeranyl pyrophosphate synthase [Danio rerio]
gi|30353819|gb|AAH52115.1| Geranylgeranyl diphosphate synthase 1 [Danio rerio]
Length = 327
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 100/284 (35%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D S
Sbjct: 12 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIEDSS 71
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ + EA+ + L G+ +
Sbjct: 72 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQLLELHRGQGLDI 131
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E + + + LK LG+ FQ+
Sbjct: 132 HWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKR---DLKPLLDTLGLYFQIR 188
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + + + +
Sbjct: 189 DDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAIWSHPGSTQVQNILRQRTENLDI--KR 246
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T +A ++ L + ++L+E
Sbjct: 247 YCVDYLEKVGSFAYTRQTLLDLEVEAYRLIKELGGNPELEALVE 290
>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
Length = 297
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + + + + S E I ++Y +GGKRLRP L AT +L
Sbjct: 1 MNDFQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IH+ +L+HDD+ D+ RRGK+ V+G +L+GD LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KS 167
AF ++ + + + + + + E I
Sbjct: 121 AFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +E++ +IA V+ R+ L+ Y +G+AFQ+ DD+LD G ++GK +G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P IL + +++
Sbjct: 241 DVDLHKATYPSIL--------------------------------------GMKESKKIL 262
Query: 288 YSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320
+KAK+ ++ + K L+ + DF R
Sbjct: 263 NDTVEKAKEIIKTKFGEEKGK-VLISLADFIKNR 295
>gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
Length = 324
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/331 (20%), Positives = 115/331 (34%), Gaps = 78/331 (23%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALML-------------EYRGDNHVLLACAIEFIHT 76
I +++ F+GGKRLRP+L + A M+ + LA A+E +HT
Sbjct: 34 IHRAMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHT 93
Query: 77 ATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA----- 129
+L+HDD+ D+ LRRG+ +V+G T++L GD L + AF + +
Sbjct: 94 YSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAI 153
Query: 130 -------------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV----- 171
+ + + D + I
Sbjct: 154 LRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITV 213
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
A S G+ +S + ++++G G+AFQ+VDDVLD E+GK G+D
Sbjct: 214 SIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQSSEELGKTAGKDTAT 273
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P + + +++ A
Sbjct: 274 DKATWPAVF--------------------------------------GIEQSKHDAAELI 295
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L D L + + ++R +
Sbjct: 296 ADAFAALEPFGD--AATPLKSLAQYLVERTH 324
>gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis]
Length = 332
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
D + + V +Y + GK +RP+L + +A + + V +A A+E++H ATL+HDD++
Sbjct: 30 DGDRLDAVTRYAVQPPGKLVRPVLLVESAAAVGADPADLVPIAVALEYLHVATLVHDDII 89
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ--------AFCMVIETKSQEALEALSLVA 137
D LRRG+ +G +++ GD LL A EA+ +++
Sbjct: 90 DGDLLRRGRPTVHARYGRDEAIVAGDALLLDTFRTLTEAAELGFPPAAVLEAVRIVAVAG 149
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
L G+ + L+ +L Y + KT LF AA +++ G +AL+S+
Sbjct: 150 LDLCRGQAMEAGLAGDLYCGMARYRTMAGLKTGALFIAACAAGAVLGGGSGEEVRALRSF 209
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+LG AFQ+ DD+L Y + + GK+ D N +PT PV++ + + + ++
Sbjct: 210 ADHLGCAFQMRDDLLPYLADTSRAGKSSVTDIVNQRPTFPVLVGIELADTTQCWRIEQSL 269
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + E + ++ E AL + R + A+ L + L+ + D
Sbjct: 270 SGRLPADEAHRLLRQVLTETGALAEASARVAAEVAAARADLAPFGVRGER--LIALADSM 327
Query: 318 LQRL 321
+ R
Sbjct: 328 IGRT 331
>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
Length = 293
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 81/335 (24%), Positives = 131/335 (39%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ +L I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLTLFLEHYKKVMDDSLLTEINKRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 TDPMRGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ E + G + ++N +T E+ + KT
Sbjct: 121 AFSVLAEDANLTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+G+ FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D L+++ D R N
Sbjct: 263 HVSIAKSALSGHDFDDI----ILLKLADLIAFREN 293
>gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
Length = 344
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 52/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87
+ ++Y +F GGKRLRP+L A +++ + ++ IE IH +L+ DD+ +D+
Sbjct: 80 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 139
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------ 141
LR G++ + T++L D L+SQAF + E + + +
Sbjct: 140 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVALMRELASSIGPSGL 199
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSY 197
G S + + + + KT L AA+ + L V + +A+ Y
Sbjct: 200 TGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVSEY 259
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G LG+A+Q+VDD+LD + +GK G+D R K T +L
Sbjct: 260 GERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVL----------------- 302
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
L + A +A +L + L ++V+
Sbjct: 303 ---------------------GLDASRAWARQLADEAWAALAPFG-GQAR-FLRKLVERV 339
Query: 318 LQRLN 322
L RL+
Sbjct: 340 LHRLS 344
>gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
Length = 362
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 52/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87
+ ++Y +F GGKRLRP+L A +++ + ++ IE IH +L+ DD+ +D+
Sbjct: 98 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 157
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------ 141
LR G++ + T++L D L+SQAF + E + + +
Sbjct: 158 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVALMRELASSIGPSGL 217
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSY 197
G S + + + + KT L AA+ + L V + +A+ Y
Sbjct: 218 TGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVSEY 277
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G LG+A+Q+VDD+LD + +GK G+D R K T +L
Sbjct: 278 GERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVL----------------- 320
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
L + A +A +L + L ++V+
Sbjct: 321 ---------------------GLDASRAWARQLADEAWAALAPFG-GQAR-FLRKLVERV 357
Query: 318 LQRLN 322
L RL+
Sbjct: 358 LHRLS 362
>gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98]
gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9]
gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210]
gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 322
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 52/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87
+ ++Y +F GGKRLRP+L A +++ + ++ IE IH +L+ DD+ +D+
Sbjct: 58 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------ 141
LR G++ + T++L D L+SQAF + E + + +
Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVALMRELASSIGPSGL 177
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSY 197
G S + + + + KT L AA+ + L V + +A+ Y
Sbjct: 178 TGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVSEY 237
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G LG+A+Q+VDD+LD + +GK G+D R K T +L
Sbjct: 238 GERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVL----------------- 280
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
L + A +A +L + L ++V+
Sbjct: 281 ---------------------GLDASRAWARQLADEAWAALAPFG-GQAR-FLRKLVERV 317
Query: 318 LQRLN 322
L RL+
Sbjct: 318 LHRLS 322
>gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
Length = 297
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIF--SGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M++++ +I + +E+ + + ++ + GK+LR L L+ A +L
Sbjct: 1 MQEIDKIIQNYL---LELAYEPILTMLSKTNTGKKLRSKLLLSIA----GESQKAYVLCA 53
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
IE IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF + + +++ +
Sbjct: 54 IIELIHLASLLHDDIIDESELRRGARSINAEFGAKNALMLGDILYSKAFYELSKQEAKIS 113
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ V LA GEL ++LSK + +E YL +I KTAVL A+ +L+A + +
Sbjct: 114 QILSNAVCK-LAIGELMDVNLSKEFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLDEN 172
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
A YG NLG+AFQ+VDD+LD G+ +GK DF+ GK TL I ++ + +
Sbjct: 173 ---AFAKYGKNLGLAFQIVDDILDITGDEATLGKPALSDFKEGKTTLAYIYLYESLNEND 229
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K K+ ++ E +E + + +A YG + ++ ++ +
Sbjct: 230 KKILKNLFKK-DLNKEERLWLKQKFKEKNIIEQSIKKAKEYGNLSLKAI----ENDKNEK 284
Query: 310 LMEVVDFCLQR 320
L ++ + R
Sbjct: 285 LEAIIKTLIDR 295
>gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
Length = 299
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 25/316 (7%)
Query: 10 KDMEKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+++E V I K + +E++ + GK LR L L A +
Sbjct: 2 EELELVKNQIKKFVEVCNYEKSLELLDKLAT------GKMLRSKLILKIA----GINEES 51
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ L +E IH A+LLHDDV+D++ RRG+ + ++ N+TS++ GD L S+AF +
Sbjct: 52 IKLCAIVEMIHAASLLHDDVIDEADTRRGQPSVNALYDNKTSIMFGDILYSRAF-TELSQ 110
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ +S L+ GE+ + L+++ + + YL +I KTA L A+ ++++
Sbjct: 111 MDKRVAYHISNAVTLLSIGEMMDVDLTQSFNTSYTKYLDMIYKKTASLIEASARSAAILV 170
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ +YG NLG+AFQ++DD+LD + +GK DF GK T+P + ++R
Sbjct: 171 NLDEEKY---ATYGKNLGLAFQMIDDILDITQDSKTLGKPAMLDFVEGKVTIPYLYLYER 227
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ K ++S + ++ +AL D+ A S G A ++ + D
Sbjct: 228 VEDKTKLESLY---KKELSEDESLWIKEQLKITKALEDSILEAKSIGNSAIEA---VKDE 281
Query: 305 SWKKSLMEVVDFCLQR 320
++L++++ ++R
Sbjct: 282 ENSQTLVQIMKAMIER 297
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 74/308 (24%), Positives = 119/308 (38%), Gaps = 52/308 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--V 84
+ + + Y + +GGKRLRP+L +A A ++ + ++ + +A A E HTA+L+HDD
Sbjct: 30 PARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPC 89
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+D+ +LRRGK +V+G ++L GD L AF + + E V +
Sbjct: 90 MDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFAQ 149
Query: 145 LRQLSLSKNLDVTEEDY----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
V + D + V KT VL A+L +++AG + L
Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRL 209
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
YG N+G+AFQ+ DD+LD G + MGK +G+D K T
Sbjct: 210 MKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTFVRAY-------------- 255
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
L + A+ L + L +
Sbjct: 256 ------------------------GLDGARALLHEKTLNAEKQLEPFAEKGA--FLRALA 289
Query: 315 DFCLQRLN 322
+ R N
Sbjct: 290 AYLEHRSN 297
>gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 368
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 80/351 (22%), Positives = 124/351 (35%), Gaps = 38/351 (10%)
Query: 7 LTLKDMEKVNFL----ILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTL 51
+ + +V L + + +Y +GGK LRP LTL
Sbjct: 17 PVEEVLRRVRELCVPALRAAVAELEAPARRAAEYHFGWVDEAGRRVEANGGKALRPALTL 76
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A + D V A A+E +H +LLHDDV+D RR + V+G T++L GD
Sbjct: 77 LCAEAAGGQADEAVPAAVAVELVHNFSLLHDDVIDGDRTRRHRATVWAVFGRPTAILAGD 136
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS AF ++ E++ V L +G+LR + L +DV+ + + KT
Sbjct: 137 SLLSLAFEVLAESRPAGVGVLAEAVTR-LNDGQLRDMDLETRVDVSLAECRDMAARKTGA 195
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +AA + + G +G LG+AFQ DD+L G+ GK +G D N
Sbjct: 196 LMAAACRLGAESGGADGERAGRFADFGGALGLAFQAADDLLGIWGDAQVTGKPVGSDLVN 255
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGK---------------------ISVENLKKA 270
K +LPV A + + G + + +
Sbjct: 256 RKRSLPVTAALAGRAPYAGRLREWYRDGGTGTTPDAVGRPPSSSETGRSDAPTAAEIAEV 315
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
+ A +L P L + R
Sbjct: 316 TGWVERAGGRRWAVAAARRELDAGLAALERAGPLEPAAGRLRALAHHLTFR 366
>gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 373
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 77/348 (22%), Positives = 127/348 (36%), Gaps = 47/348 (13%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGDN------H 64
L+ I D+ I + L+ GGKR R +G+
Sbjct: 26 LREISPDLVPIQEFSSDLL-RGGKRFRAQFCYWGWRSVIDLEPSPAGRPQGEERPGYRAV 84
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------------- 107
V +A +E H A L+HDD++D S RRG+ AA + +
Sbjct: 85 VGVAAGLEIFHAAALIHDDIIDRSDTRRGRPAAHRRFEALHAASGWGGSSAGFGEAGATL 144
Query: 108 -------------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ L+ + + L E
Sbjct: 145 LGDLLLGWSDELLIDSLLALADGSAARATRAELATMRTQVTLGQYLDVLEEVAWPTVPED 204
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
D + ++ A L V + +AG AL++ G+ LGIAFQL DDVL
Sbjct: 205 DTLARAHNVIVYKSAKYSIEAPLVVGASLAGATPEQVAALRAVGLPLGIAFQLRDDVLGV 264
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ GK G+D R GK T+ + LA +R + + + D + E ++ ++
Sbjct: 265 FGDSAVTGKPSGDDLREGKRTVLIALARRRLPDGVRRTVDALLGDADLDDEQIRALQSVL 324
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
RE+ AL + E Y +++ +LR P + + L +VD +R+
Sbjct: 325 RESGALDEVEGMIARYVRESLAALRDAPIGARARNQLELLVDSVTRRV 372
>gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
corporis]
gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
corporis]
Length = 313
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 107/286 (37%), Gaps = 5/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + KY++ GK +R L A L+ D ++ ++ +H ++LL DD+ D
Sbjct: 21 DEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIPSDKLNVIVEIVQILHNSSLLLDDIQD 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ ++++ A + A + + L G+
Sbjct: 81 NSVLRRGIPVAHSIYGIPSTINAANYVIFIALEKTLSLDHPNATQVYTEQLLELHRGQGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ N E + K ++ + + + + +G+ FQ
Sbjct: 141 EIYWRDNFLCPSESEYKQMTMKKTGGL---FMLAVRLMQLFSDNKSDFSKIAGIIGLIFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK + P++ A + + V+
Sbjct: 198 IRDDYGNLMLKEFTENKSFCEDLTEGKFSFPIMHAIRNRPDD--GQVMQILRLRTKDVDV 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K ++ + + T + +AK + L + +L+
Sbjct: 256 KKYCVSLLEKFGSFAYTRETLENLVIEAKKEIDRLGGNPHLDALLN 301
>gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R]
gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 366
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 78/328 (23%), Positives = 124/328 (37%), Gaps = 36/328 (10%)
Query: 28 EMIPDVVKYL---IFSGGKRLRPMLT---LATALMLEYRGDN---HVLLACAIEFIHTAT 78
+ D V +L + +GGKR+RP+ A L+ + + A ++EFI
Sbjct: 38 APVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGLKNSSERLESVLDAAASLEFIQACA 97
Query: 79 LLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVI 122
L+HDD++D S RRG +G S+L GD L A M+
Sbjct: 98 LIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQ 157
Query: 123 ETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ ++ + + L S + E A +
Sbjct: 158 DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARP 217
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+
Sbjct: 218 LHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTV 277
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ LA QR K+ + S E++ +R A + E R +
Sbjct: 278 LLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVIAEHIRATGAEEEVEQRISQLTESG 337
Query: 295 KDSLR--CLPDSSWKKSLMEVVDFCLQR 320
L +PD + L + +R
Sbjct: 338 LAHLDDVDIPD-EVRAQLRALAIRSTER 364
>gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 299
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVA 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 291
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDRWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G + + + KT L
Sbjct: 123 LLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLP 237
T P
Sbjct: 243 STYP 246
>gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
Length = 288
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 14 KVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70
+++ + + S+V + ++ Y + +GGKRLRP+L LAT L Y+ ++ + +AC
Sbjct: 13 QIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYKISESELRIACG 72
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-- 126
IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +
Sbjct: 73 IELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWITEGSNSA 132
Query: 127 ---QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+A+ + + + + + + KT L A+++++++
Sbjct: 133 ALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENVKVIDQMEWLKTGCLIEASVKMAAVY 192
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
AG L ++ G ++Q+ DD++D E GK +D GK
Sbjct: 193 AGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADEGKNNTL 246
>gi|71005942|ref|XP_757637.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
gi|46097068|gb|EAK82301.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
Length = 946
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG-EDFRNGKPTLPVILAFQRGTKREKNFW 253
YG NLGIAFQLVDD+LD++ GK G D R G T PV+ A+Q +
Sbjct: 434 YGYGRNLGIAFQLVDDLLDFQSTSAAFGKPSGGADLRLGLATAPVLYAWQELPGERIHEM 493
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ +++ ++ +++ L T A + ++A L LPDS K++L+++
Sbjct: 494 V---ARRFEAQADVENMLRLVDKSQGLQRTAALAKEHARRATSHLDVLPDSDAKQALIKL 550
Query: 314 VDFCLQRLN 322
+ ++R+N
Sbjct: 551 NEQVIKRVN 559
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ S + + KY + GK +RP++ L + +
Sbjct: 119 SLLGSGHPSLDTIAKYYFQAEGKHVRPLIVLLMSKAVNG 157
>gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
Length = 301
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L+ + LI +R + + + Y + SGGKR+RP+LTLA
Sbjct: 15 IQQLQQDVANHLT---KLIEER--PTEARLKEAMLYAVQSGGKRIRPLLTLAVGSAGTST 69
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E IHT +L+H +DD +RRG+ + T++L GD LL+ AF
Sbjct: 70 NKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRGRPTVHKAFDEATAILAGDALLTLAF 129
Query: 119 CMVIETKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + ++ + ++ + + I +
Sbjct: 130 EVAANANLEARQLVEAVKILSSASGMSGMISGQMKDIASEEVTITLERMKEIHREKTGEL 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A + +++A SY + G+AFQ+ +D+ D + GK G+D K
Sbjct: 190 LLAAVRLGNLFVDDAKMKEAFVSYATHFGLAFQIQNDLQDVCWTSEQTGKETGKDSELSK 249
Query: 234 PTLP 237
T P
Sbjct: 250 NTYP 253
>gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
Length = 298
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 62/330 (18%)
Query: 13 EKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRG 61
+V ++ ++ S+V+ + D V Y + GGKRLRP L + A +
Sbjct: 11 ARVEACLVAQLNQLPRSEVQ-LADAVAYSLKVGGKRLRPALVYSAAASLRADLTLFPPNL 69
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
L A AIE IHT +L+HDD+ +D+ LRRG+ + T++LVGD L + AF
Sbjct: 70 TPLDLAAAAIESIHTYSLVHDDLPAMDNDDLRRGQPTVHRQYDEATAILVGDALQAWAFE 129
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVL 172
++ + + A + +++V + + L + LD+ + + KT L
Sbjct: 130 LLTQIDTLPADKVVAMVKELAQASGPKGMVLGQALDMQATGASESVDYLKQLHSLKTGAL 189
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+AL + + + R+ L +YG +G+ FQ+VDD+LD + +GK G+D
Sbjct: 190 IRSALRLGAYCMNAGSKERRVLSAYGDAIGLCFQVVDDILDVTTDSATLGKTAGKDQEAD 249
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T +L L + A
Sbjct: 250 KLTYVKLL--------------------------------------GLEGAKAEAQHLCA 271
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+AK S+ LP+ + L+E+ D+ R +
Sbjct: 272 QAKASVADLPNP---QVLVELADYICNRAS 298
>gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
Length = 326
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M+E L + +E++ LI + V+ ++ GK R L L A +
Sbjct: 1 MIEILLKEWIEQIKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSN 59
Query: 59 --YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F EA+ LS + GE+ Q D++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +G + Q L+ + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQNYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSEITVYLEKMLN 320
>gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 361
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 62/347 (17%), Positives = 124/347 (35%), Gaps = 44/347 (12%)
Query: 15 VNFLILKR---ICSDVEMIPDVVKYLIF---SGGKRLRPMLTLATAL----------MLE 58
+N ++R + + + + + L +GGKR+RP +
Sbjct: 16 LNEFFMERQSAMKAISPVADEAMAALTDFTINGGKRIRPTFAWLGWMGSLQLTFSDAAEH 75
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL---------- 108
D + A ++E + + L+HDD++D SA RRG + S
Sbjct: 76 PDADAVMHAASSLELLQSCALIHDDIIDSSATRRGMPTVHEHFKQSHSAQAWHGRGESYG 135
Query: 109 -------------VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
D + +A + + +
Sbjct: 136 NAVAILIGDLALSWADDMFMEAALPPAQRDRAWQPWQDMRTEVVCGQIMDVTAEAQGDGS 195
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + ++ A L + + +AG AL+++G ++G+AFQL DD L
Sbjct: 196 LRTAERVNR-YKTAAYTVERPLHIGAALAGAPQDTVTALRTFGRDIGVAFQLRDDQLGVF 254
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ GK G+D R GK T + L ++ ++ +S++ +S +++ I++
Sbjct: 255 GDPEVTGKPSGDDLREGKRTTLLALTLDIVSESDRETVESSLGQP-LSEQDVDHLRAIIK 313
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQR 320
++ A E + S A +L L D ++L + +R
Sbjct: 314 KSGAYDRVEKQIDSLVTSAVHALADARLSD-DAHRALRSMAISSTER 359
>gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 299
Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVA 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 295
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 71/335 (21%), Positives = 122/335 (36%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M L E V I + + + D ++Y GGKRLR L A M
Sbjct: 1 MVRLRASLAARAEAVEHTIDRLLAPVNGGEARLIDAMRYATLGGGKRLRGYLVAEVASMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A ++E +H +L+H +DD LRRG+ + + T++L GD L +
Sbjct: 61 KVEEAGAYRAAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKS 167
AF ++ + + + TLA + + E + +
Sbjct: 121 MAFGILADPATHRDAGVRIDLVTTLAAASGAAGMVGGQMIDMEGEGRSLSLEEVARLHAL 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + E +++ +R+ + +YG +LG AFQ+ DDVLD E+GK G+
Sbjct: 181 KTGCLIRYSAEAGAILGQAAPDLRERIAAYGRDLGAAFQVADDVLDATASAEELGKTAGK 240
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T ++ + + A
Sbjct: 241 DEAAGKSTY----------------------------------VALL----GVEGAAHEA 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ L S L ++V++ ++R N
Sbjct: 263 RRIAAQAEAHLDIF--GSEADRLRDLVNYVVERRN 295
>gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
Length = 288
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + S+V + ++ Y + +GGKRLRP+L LAT L Y+
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYK 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
Length = 311
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 53/335 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M L + +I + + + D ++Y GGKRLR L A +
Sbjct: 17 MVRLRASMSARATAIESMIDRLLPRVEGGEARLIDAMRYATLGGGKRLRGYLVAEVASLF 76
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ +A ++E +H +L+H +DD LRRG+ + + T++L GD L +
Sbjct: 77 NVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDALQT 136
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKS 167
AF ++ + E + LA+ + + E + +
Sbjct: 137 MAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLHAL 196
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + E +++ R + +YG +LG AFQ+ DDVLD E+GK G+
Sbjct: 197 KTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDATASAEELGKTAGK 256
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T ++ + A
Sbjct: 257 DEAAGKSTY----------------------------------VALL----GVEGAAKEA 278
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++A + L ++V + ++R N
Sbjct: 279 RRVAEQALSHIDIF--GPEADRLRDLVHYVVERRN 311
>gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + + K+ + + S +++ + ++Y + +GGKR+RP+L L +A L
Sbjct: 11 ISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLG 70
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A ++E +HT +L+HDD+ + LRRGK +G +VL GD LL+
Sbjct: 71 KKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLT 130
Query: 116 QAFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+F + T + + L ++ E+ H+ KT
Sbjct: 131 TSFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKT 190
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D
Sbjct: 191 GALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDE 250
Query: 230 RNGKPTLPVILAFQRGTK------REKNFWKSTINDGKISVENLKKAFIIMR 275
K T P++L Q + + + I+++ ++ +
Sbjct: 251 IENKNTYPILLGIQGTKEALVEVLNNTENLLKEMANNDIAIDLFEQLLDYFK 302
>gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 373
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 79/348 (22%), Positives = 127/348 (36%), Gaps = 47/348 (13%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGDN------H 64
L+ I D+ I + L+ GGKR R +G+
Sbjct: 26 LREISPDLVPIQEFSSDLL-RGGKRFRAQFCYWGWRSVIDLEPSPAGRPQGEERPGYRAV 84
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------------- 107
V +A +E H A L+HDD++D S RRG+ AA + +
Sbjct: 85 VGVAAGLEIFHAAALVHDDIIDRSDTRRGRPAAHRRFEALHAASGWGGSSASFGEAGATL 144
Query: 108 -------------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ L+ + + L E
Sbjct: 145 LGDLLLGWSDELLIDSLLALADGSAARATRAELAMMRTQVTLGQYLDVLEEVAWPTVPEE 204
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
D + ++ A L V + +AG AL++ G+ LGIAFQL DDVL
Sbjct: 205 DTLARAHNVIVYKSAKYSIEAPLVVGANLAGATPEQVTALRAVGLPLGIAFQLRDDVLGV 264
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ GK G+D R GK T+ + LA +R + + + D + E ++ I+
Sbjct: 265 FGDSAMTGKPSGDDLREGKRTVLIALARRRLPDGVRRTVDALLGDPDLDDEQIRVLQSIL 324
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQRL 321
RE+ AL + E + +++ +LR P S K L +VD +R+
Sbjct: 325 RESAALDEVEGMIARHVRESLAALRDAPIGSRAKNQLELLVDSVTRRV 372
>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 307
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 73/342 (21%), Positives = 117/342 (34%), Gaps = 60/342 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
+ K E+ L+ + + + + + + ++Y GGKRLRP L +
Sbjct: 6 LTDFTQRLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRPFLVVE 65
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVG 110
+A + +L A+E IH +L+HDD+ LRRG+ V+ + T++L G
Sbjct: 66 SAAVFGVPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAG 125
Query: 111 DFLLSQAFCMVIETKSQEAL----------EALSLVACTLAEGELRQLSLSKNLDVTEED 160
D LL+ AF ++ + + V L + D D
Sbjct: 126 DALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVD 185
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
V + KT L +L+ + QAL YG LG AFQ+ DD+LD G+
Sbjct: 186 VARVQQMKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAAT 245
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G D GK T L +
Sbjct: 246 LGKPAGADAELGKTTFVTQL--------------------------------------GI 267
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ R + +L S L F +R +
Sbjct: 268 EGAKQRVRDLLARGDAALSIF--GSKGDVLRAAAHFVAERKS 307
>gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
Length = 295
Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 119/321 (37%), Gaps = 54/321 (16%)
Query: 14 KVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V ++ + + + + + D + Y + +GGKRLRPML T + G A
Sbjct: 13 EVEAVVERYLPAADGYQKTVLDAMNYSVRAGGKRLRPMLMEETYRLFGGSGTVVEPFMAA 72
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT++L+HDD +D+ LRRG + +G +VL GD LL A + +
Sbjct: 73 IEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLAGDSLLIYAVETAAKAFALT 132
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVT--------EEDYLHVIKS-KTAVLFSAALEV 179
A+ + + + V + L I KT L +++ +
Sbjct: 133 EDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEKLDFIYHLKTGALLESSMMI 192
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L+AG + ++ +G+AFQ+ DD+LD + +GK + D +N K T +
Sbjct: 193 GALLAGADEEETRLVEQMAAAIGLAFQIQDDILDVTSSMEVLGKPVLSDEKNNKTTYVTL 252
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + S A L
Sbjct: 253 E--------------------------------------GLEKAKQDVASISDDAVRILH 274
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
LP + L ++ + R
Sbjct: 275 ELPG--ENEFLEALIHMLVSR 293
>gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum]
Length = 343
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
SYG +LG+AFQLVDDVLDY +++GK G D G T PV A + + + +
Sbjct: 221 YSYGRHLGLAFQLVDDVLDYTSSNDQIGKPAGADLELGLATAPVFYACEEFGELGELIER 280
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
DG + +KA ++ ++ + T A S+ A+ ++ P S K L EV+
Sbjct: 281 RFCLDG-----DAEKARALVHKSNGIDRTLALAGSFCDTARQAISSFPPSEAKDGLEEVL 335
Query: 315 DFCLQRL 321
+ L R
Sbjct: 336 EMVLTRK 342
>gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 299
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQALAFAIISDAPMPEVA 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 355
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/314 (17%), Positives = 102/314 (32%), Gaps = 23/314 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ V++ + +GGKR+RP+ V+ A ++E H L+HDD+VD S
Sbjct: 40 VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDASPIVVAAASLELFHAFALIHDDIVDRS 99
Query: 89 ALRRGKVAARLVWGNQTSVL----VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
RRG + + QA + + + + +
Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-------- 196
+ L++ + A + + +V + ++
Sbjct: 160 RGHVLLARMRSEVIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALAGAA 219
Query: 197 ---------YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+G LG AFQL DD+L G+ + GK+ +D R GKPT+ + LA +
Sbjct: 220 PEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGKSNLDDLREGKPTVLLALARASASP 279
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCLPDSSW 306
+ D + + I+ E+ A E
Sbjct: 280 AGAARLGELVGDPGLDQSAAAEVRGIVEESGAREAVERMIRTRADAALVALDALPLAEPA 339
Query: 307 KKSLMEVVDFCLQR 320
++ L + + + R
Sbjct: 340 RRVLAALAERAVDR 353
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 132/343 (38%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LM-LEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQSNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQ------------EALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ + ++ L+ + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ++DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDIISSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 ALGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L D++ K L+++ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFEALAHFGDNA--KELVDISQFLLARTN 303
>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 300
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/322 (20%), Positives = 115/322 (35%), Gaps = 55/322 (17%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N ++ + + + + ++Y GGKR RP LT T ML D+ A A+E
Sbjct: 19 NDVLANWLATQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVE 78
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+HDD+ LRRG+ + + T++L GD L + AF ++ + +
Sbjct: 79 CIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEILANGQLSQDG 138
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + G+ L E+ L A++ A +
Sbjct: 139 NTQRIAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGALIRCAVRLGA 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ L Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 199 LAAGEKGIAILPQLDKYAEAIGLAFQVQDDILDVISDTETLGKPQGSDLELDKSTYP--- 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L + +A Q+A +L
Sbjct: 256 -------------------------------ALL----GLDGAQEKAQLLYQEALQALAA 280
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P + L + ++R +
Sbjct: 281 IPYN--TSQLEVFARYIIERKS 300
>gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
B100]
gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris]
Length = 291
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 67/328 (20%), Positives = 120/328 (36%), Gaps = 51/328 (15%)
Query: 6 DLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 4 ALFERWLARTERQLDACLPSPALAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEG 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF +
Sbjct: 64 SLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGRPTVHIAFDEATAILAGDALQARAFEL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFS 174
+ E + AL L + A G + KT L
Sbjct: 124 LAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALDALQRMHALKTGALIR 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA+ + L G + +Q L ++ LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 184 AAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKS 243
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P ++ + + +
Sbjct: 244 TYP----------------------------------ALL----GMDGAKTKLAELASHM 265
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP +L + F + R +
Sbjct: 266 HALL--LPYGESGATLASLGRFAVDRAH 291
>gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 299
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAILSDAPMPEVT 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L+ + A++ +A +
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARNKARDLIEDARQSLHQ 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAQSLDTSALEALANYIIQR 297
>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
Length = 288
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 54/320 (16%)
Query: 14 KVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
K++ ++ + + + + ++Y + GGKR+RP+L + G N CA
Sbjct: 8 KIDEMLXNYLAKETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTG-NIAPYMCA 66
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IEF+HT +L+HDD+ LRRG + + T++L GD LL+ AF ++++ +
Sbjct: 67 IEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQDLVSD 126
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVS 180
A ++ A LA G + + + + +KT L +AL++
Sbjct: 127 MDPAKAIAANILATGAGASGMVLGQMYDMFYEGKEISIEMLEKIQLNKTGALIKSALKMG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ S AL+ YG+ LG FQ++DD+LD G+VNE+GK+IG D +N K T
Sbjct: 187 AVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGKDIGSDSKNKKVTYTSFF 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ A KA L
Sbjct: 247 --------------------------------------SVDQCYEIAAELTAKAIKCLDK 268
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + L E+ L R
Sbjct: 269 V--NGDTSLLKEIAQDLLNR 286
>gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512]
Length = 387
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 73/339 (21%), Positives = 125/339 (36%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + ++ L+ + + E + + Y + +GGKRLRP L + +
Sbjct: 89 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 148
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+H +DD +RRGK + + T++L GD
Sbjct: 149 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 208
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF +V ++ + G ++ E +
Sbjct: 209 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 268
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E ++IAG RQ L+++G +G+AFQL DD+LD + MGK
Sbjct: 269 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAATMGK 328
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + +
Sbjct: 329 ATGKDAARGKGTLVALH--------------------------------------GMEWA 350
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + A+ L P + +L+ F R +
Sbjct: 351 ETELRRHVADAEALLA--PYGTRASTLIAAAHFIADRKS 387
>gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
Length = 299
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 122/324 (37%), Gaps = 54/324 (16%)
Query: 13 EKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN + ++ + + ++Y GGKRLRP L AT ML A
Sbjct: 12 QRVNAALQGFISQLPFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRG+ + +G + ++L GD L + AF ++ +
Sbjct: 72 AIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L+ E A++ SA
Sbjct: 132 GVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL + +G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A+ Q++ ++
Sbjct: 252 ALM--------------------------------------GLDNARIKAWELCQESLNA 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + F ++R
Sbjct: 274 LDTLAAQSYNTSALRALASFVIER 297
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + + K+ + + S +++ + ++Y + +GGKR+RP+L L +A L
Sbjct: 11 ISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLG 70
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A ++E +HT +L+HDD+ + LRRGK +G +VL GD LL+
Sbjct: 71 KKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLT 130
Query: 116 QAFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+F + T + + L ++ E+ H+ KT
Sbjct: 131 TSFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKT 190
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D
Sbjct: 191 GALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDE 250
Query: 230 RNGKPTLPVILAFQRGTK------REKNFWKSTINDGKISVENLKKAFIIMR 275
K T P++L Q + + + I+++ ++ +
Sbjct: 251 IENKNTYPILLGVQGTKEALVEVLNNTENLLKEMANNDIAIDLFEQLLDYFK 302
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
Length = 297
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L + + K+ + + S +++ + ++Y + +GGKR+RP+L L +A L
Sbjct: 3 ISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLG 62
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A ++E +HT +L+HDD+ + LRRGK +G +VL GD LL+
Sbjct: 63 KKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLT 122
Query: 116 QAFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+F + T + + L ++ E+ H+ KT
Sbjct: 123 TSFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKT 182
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D
Sbjct: 183 GALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDE 242
Query: 230 RNGKPTLPVILAFQRGTK------REKNFWKSTINDGKISVENLKKAFIIMR 275
K T P++L Q + + + I+++ ++ +
Sbjct: 243 IENKNTYPILLGVQGTKEALVEVLNNTENLLKEMANNDIAIDLFEQLLDYFK 294
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 303
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 75/343 (21%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQPNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQ------------EALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ + ++ L+ + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKKITQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ++DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L D K+ L+++ F L R N
Sbjct: 263 LEQAKVYAKELHDQAFEALAHFGD-DAKE-LVDISQFLLARTN 303
>gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
Length = 290
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 13 EKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69
E++ + K + +D++ + + Y + +GGKRLRP LTL T ML D+ + A
Sbjct: 10 EQIEDYLSKSLATDIDQATLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAAS 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V +
Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLP 129
Query: 128 EALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + + ++ + ++ + KT L A+
Sbjct: 130 ANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLAGG 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P
Sbjct: 190 IMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGKAVRKDADEQKNTYP 245
>gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
Length = 291
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 75/332 (22%), Positives = 126/332 (37%), Gaps = 61/332 (18%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEY-- 59
+ + V + + + D + +++ SGGKR+RPM+ L
Sbjct: 2 EYLERRRALVESRLEAVLDATEP---DAMTDRLEHVSLSGGKRVRPMVALLAFEAAGGEL 58
Query: 60 ---------RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
N + A IE +H A+L+ DD++D+S LRRG +A +G ++
Sbjct: 59 VGEDGRGSEPSRNAIDFAVGIELVHNASLVVDDIIDESELRRGVDSAWAAFGYGPAITTS 118
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
D LL +AF + A+ VA + E + + +E Y+ + + KT
Sbjct: 119 DGLLGEAFSLFS-----ADPRAMRTVAEAMVELGEGEATELVERPDSEAAYMELARRKTG 173
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AA E+ ++ A A Y +GIAFQ+ DDVLD + +++GK G+D
Sbjct: 174 ALFRAAAELGAIAADADTYAVDAFGQYAERVGIAFQIRDDVLDATADADDLGKPTGQDAE 233
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+P++ I + RA +
Sbjct: 234 MERPSVVQITDMSP------------------------------------DEANERARTE 257
Query: 291 GQKAKDSLRCLP--DSSWKKSLMEVVDFCLQR 320
A SL DS L ++ +F + R
Sbjct: 258 SDAALSSLSAADTVDSEAVGYLEDLAEFVVVR 289
>gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703]
Length = 306
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 122/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPLPFGNSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L+ ++
Sbjct: 129 FSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQTTLDDLEKIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D ++GK T P ++ L + +A
Sbjct: 249 DQQHGKSTYPALM--------------------------------------GLDCAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L S+ + L + F ++R N
Sbjct: 271 IDLYQEALSALNALSAQSYNTAPLQALACFIIERDN 306
>gi|307205407|gb|EFN83748.1| Decaprenyl-diphosphate synthase subunit 2 [Harpegnathos saltator]
Length = 349
Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 120/343 (34%), Gaps = 40/343 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ + + K + S+ ++ K +IF+G G ++ L +
Sbjct: 16 SLRWLLSDEIANIALHLRKLVGSNHPLLKTA-KNIIFNGHNNIQAFG-----LIVLLISK 69
Query: 56 MLEYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLV 100
+ NH+ LA E I T+ L+H +V+ +
Sbjct: 70 AAGHLNVNHIEEDKSAGVLHSQRALAEITEMIRTSGLIHKGLVNIDVNGSLGASEMDHMT 129
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GN+ ++L GD+LLS + + ++Q+ +S LA+ E ++N +
Sbjct: 130 FGNKIALLSGDYLLSNSCAELAALRNQDITFLISSALADLAQAEFVARRDNQNYPIP--- 186
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--- 217
I K ++ I G + + ++ + G + ++ ++ +
Sbjct: 187 ---SIPPKDRTGYALEEWELLNIYGAGSLLGKSCQGTLKLAGHSNEIQEEGHKFGQHLSL 243
Query: 218 -VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIM 274
++ + A ++ G SVEN+ K I+
Sbjct: 244 AWQAYLDLALCINKDEAILHNLCAAPIMFHVEHDPSILVELDKGLKSVENVDYMKVLEIV 303
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ T+ + ++A ++L +S +K+L ++
Sbjct: 304 TAGPGIELTKELVKEHSRRAMEALNVFEESDARKALSNIIAAI 346
>gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
Length = 316
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 12 MEKVNF--LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVL 66
+E+V ++ + V++ + + GK R L L A + E + +
Sbjct: 2 IEQVKQYMHLIADYSKKETEVGAVLEDALNASGKMFRTKLLLFCASLGPCYEEKKEKLCK 61
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +E H A+L+HDD+VDDS RRGK++ + +G +V GDFL+++ + +
Sbjct: 62 LAAMVELTHLASLIHDDIVDDSPYRRGKISIQGKYGKDAAVYAGDFLMARIYYYEAVERL 121
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
E+ LS + GE+ Q DV+ E+Y I+ KTA LF A + ++ AG
Sbjct: 122 NESAALLSKTVEHMCTGEIGQDLCRYREDVSVEEYFQNIQGKTAALFETACHIGAMEAGC 181
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + LK +G NLG+ FQL DD+LD+ ++E+GK +DF+NG T PVI+A Q+
Sbjct: 182 SQEMIEKLKLFGRNLGMMFQLKDDILDFTSNMDEIGKETHKDFQNGIYTFPVIMALQQEQ 241
Query: 247 KREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + N G + + K + E R + T S +K K L+ +
Sbjct: 242 AKKILYPIMEKNKGHRLDDAEITKMESCVLEYRGVEATYQEIQSLSKKNKQILQEI 297
>gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22]
gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22]
Length = 299
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 25/316 (7%)
Query: 10 KDMEKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+++E V I K + +E++ + GK LR L L A +
Sbjct: 2 EELELVKNQIEKFVEVCNYEKSLELLDKLAT------GKMLRSKLILKIA----GINEES 51
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ L +E IH A+LLHDDV+D++ RRG+ + ++ N+TS++ GD L S+AF +
Sbjct: 52 IKLCAIVEMIHAASLLHDDVIDEADTRRGQPSVNALYDNKTSIMFGDILYSRAF-TELSQ 110
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ +S L+ GE+ + L+++ + + YL +I KTA L A+ ++++
Sbjct: 111 MDKRVAYHISNAVTLLSIGEMMDVDLTQSFNTSYTKYLDMIYKKTASLIEASARSAAILV 170
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ +YG NLG+AFQ++DD+LD + +GK DF GK T+P + ++R
Sbjct: 171 NLDEEKY---ATYGKNLGLAFQMIDDILDITQDSKTLGKPAMLDFVEGKVTIPYLYLYER 227
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ K ++S + ++ +AL D+ A S G A ++ + D
Sbjct: 228 VEDKTKLESLY---KKELSEDESLWIKEQLKITKALEDSILEAKSIGNSAIEA---VKDE 281
Query: 305 SWKKSLMEVVDFCLQR 320
++L++++ ++R
Sbjct: 282 ENSQTLVQIMKAMIER 297
>gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198]
gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198]
Length = 298
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 19/313 (6%)
Query: 9 LKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ +E V I I + E I D K+L GK LR L LA A + + L
Sbjct: 2 EQKLELVQKQIADYIKELESEEILDFCKHLQN--GKMLRSRLILAIA----PNHPDVIKL 55
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+E I A+LLHDDV+DDS LRRG + ++GN+ S+++GD S+AF + +
Sbjct: 56 CAIVEMIQNASLLHDDVIDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAF-FELLDLDK 114
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+++S L+ GE+ + +S+ YL++I+ KTA L +++ +S++A +
Sbjct: 115 RITKSISDCVVRLSRGEISDVMMSRAFQPDFLKYLNMIEDKTASLVASSAMSASILANLD 174
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+YG+NLGIAFQ+VDD+LD G+ +GK D+ GK TLP IL ++R +
Sbjct: 175 VKKH---YNYGLNLGIAFQIVDDLLDVFGDDKTLGKPAMNDYAEGKTTLPYILLYERSSP 231
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+++ S E M E + A YG A D+++ +
Sbjct: 232 KDRQELVSYFKK--QDPEISAWILAKMHEYEIFPLAQKIARDYGVLALDAIK----GEER 285
Query: 308 KSLMEVVDFCLQR 320
L + + R
Sbjct: 286 --LESIARQMIFR 296
>gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 355
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/314 (17%), Positives = 102/314 (32%), Gaps = 23/314 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ V++ + +GGKR+RP+ V+ A ++E H L+HDD+VD S
Sbjct: 40 VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDAAPIVVAAASLELFHAFALIHDDIVDRS 99
Query: 89 ALRRGKVAARLVWGNQTSVL----VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
RRG + + QA + + + + +
Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-------- 196
+ L++ + A + + +V + ++
Sbjct: 160 RGHVLLARMRSEVIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALAGAA 219
Query: 197 ---------YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+G LG AFQL DD+L G+ + GK+ +D R GKPT+ + LA +
Sbjct: 220 PEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGKSNLDDLREGKPTVLLALARASASP 279
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCLPDSSW 306
+ D + + I+ E+ A E
Sbjct: 280 AGAARLGELVGDPGLDQSAAAEVRGIVEESGAREAVERMIRTRADAALVALDALPLAEPA 339
Query: 307 KKSLMEVVDFCLQR 320
++ L + + + R
Sbjct: 340 RRVLAALAERAVDR 353
>gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 347
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 74/344 (21%), Positives = 131/344 (38%), Gaps = 26/344 (7%)
Query: 3 MLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
L+ ++ +L+ + + + ++ + + GKR+R
Sbjct: 6 ALKSRIDTELRAFVREETGLLEAVDPLLAPVGAQLRAAV-ADGKRIRAAFCYWGWRAAGQ 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS------------ 106
V A A+E +H A L+HDD++DDS LRRG + T+
Sbjct: 65 GDTPAMVRAAAAMELVHAAALVHDDLIDDSLLRRGVPTPHVALREATAKAPDPDGAARSL 124
Query: 107 -VLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+LVGD L++ A + A S++A L GE ++ + +E
Sbjct: 125 ALLVGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLARELIAGECLEVLRTGTETDPQES 184
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ L++ + G YG+ LG AFQL DD+L G+
Sbjct: 185 LTIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLLAVFGDPAI 244
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GKN +D +PT V A Q T R++ + I +L + I++ + A
Sbjct: 245 TGKNNLDDLVAARPTALVAFARQGATPRDRAVLDRLLGREDIGSADLAEVRAILQRSGAR 304
Query: 281 VDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
E ++A+ +L LP S+ ++L ++ R +
Sbjct: 305 GRVEQLIAQRVRRARAALSGAALPRSAA-EALHQLAGAVTTRTS 347
>gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3]
Length = 371
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 121/314 (38%), Gaps = 31/314 (9%)
Query: 17 FLILKRICSDVEMIPD-VVKYLIFSGGKRLRP--------MLTLATALMLEYRGDNHVLL 67
I++ I + ++ D V+ + G RP + + L R +
Sbjct: 77 AEIVEMIHT-ASLLHDDVIDHSDTRRG---RPSGNTAFTNKMAVLAGDFLLGRATVSISR 132
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E + + ++V+ ++ + + +
Sbjct: 133 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHK------------LLPVPS 180
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ LE + + QLS + ++ E Y+H KTA L S + +++++G
Sbjct: 181 KKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGAS 240
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+V +G NLGI FQLVDD+LD+ ++GK G D + G T PV+ A++
Sbjct: 241 PAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPS 300
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
++ G +++K +R + + T+ A Y KA +L LP+S
Sbjct: 301 LGPLISRNFSERG-----DVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDA 355
Query: 307 KKSLMEVVDFCLQR 320
+ +L + + L R
Sbjct: 356 RSALEFLTNSILTR 369
>gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
YJM789]
gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
RM11-1a]
gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291]
gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118]
gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796]
gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13]
gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 473
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 121/314 (38%), Gaps = 31/314 (9%)
Query: 17 FLILKRICSDVEMIPD-VVKYLIFSGGKRLRP--------MLTLATALMLEYRGDNHVLL 67
I++ I + ++ D V+ + G RP + + L R +
Sbjct: 179 AEIVEMIHT-ASLLHDDVIDHSDTRRG---RPSGNTAFTNKMAVLAGDFLLGRATVSISR 234
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E + + ++V+ ++ + + +
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHK------------LLPVPS 282
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ LE + + QLS + ++ E Y+H KTA L S + +++++G
Sbjct: 283 KKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGAS 342
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+V +G NLGI FQLVDD+LD+ ++GK G D + G T PV+ A++
Sbjct: 343 PAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPS 402
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
++ G +++K +R + + T+ A Y KA +L LP+S
Sbjct: 403 LGPLISRNFSERG-----DVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDA 457
Query: 307 KKSLMEVVDFCLQR 320
+ +L + + L R
Sbjct: 458 RSALEFLTNSILTR 471
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
>gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c]
gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial;
Short=HPS; Flags: Precursor
gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces
cerevisiae]
gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae]
gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae]
gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c]
gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO]
Length = 473
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 121/314 (38%), Gaps = 31/314 (9%)
Query: 17 FLILKRICSDVEMIPD-VVKYLIFSGGKRLRP--------MLTLATALMLEYRGDNHVLL 67
I++ I + ++ D V+ + G RP + + L R +
Sbjct: 179 AEIVEMIHT-ASLLHDDVIDHSDTRRG---RPSGNAAFTNKMAVLAGDFLLGRATVSISR 234
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E + + ++V+ ++ + + +
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHK------------LLPVPS 282
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ LE + + QLS + ++ E Y+H KTA L S + +++++G
Sbjct: 283 KKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGAS 342
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+V +G NLGI FQLVDD+LD+ ++GK G D + G T PV+ A++
Sbjct: 343 PAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPS 402
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
++ G +++K +R + + T+ A Y KA +L LP+S
Sbjct: 403 LGPLISRNFSERG-----DVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDA 457
Query: 307 KKSLMEVVDFCLQR 320
+ +L + + L R
Sbjct: 458 RSALEFLTNSILTR 471
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
>gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 336
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---------GDNHVLLACAIEFIHTA 77
V + + Y + +GGKRLRP L + ML + D L A+E IH
Sbjct: 68 VSELDLAITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYLIRAVESIHIY 127
Query: 78 TLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+HDD+ LR G+ + ++LVGD LLS+A+ +T + EA L+
Sbjct: 128 SLIHDDLPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATKTDNVEAGMILAQ 187
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
A + G+ R L+ + VT +D ++K KTA L +A + ++ + ++ L
Sbjct: 188 NALAMVHGQWRDLAFTD-QKVTYQDLCEMVKRKTAALIAAPVLAAATLTEADAPTKRQLS 246
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ NLGIAFQ+ DD+LD E MGK +G+D K T +L
Sbjct: 247 QFAENLGIAFQIRDDILDVEAESERMGKTLGKDAAEHKTTFVKVL--------------- 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVV 314
+V+ + Y AK +L L D K+L E+
Sbjct: 292 -----------------------GMVEAKRELVRYTDIAKRALADLADRGYETKNLAELT 328
Query: 315 DFCLQR 320
+ + R
Sbjct: 329 AWLVDR 334
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 72/324 (22%), Positives = 128/324 (39%), Gaps = 57/324 (17%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++ ++ + +I + + Y + +GGKRLRPML T + R
Sbjct: 16 QEIETVLQDYLPRQKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFNGRSKALKPFMA 75
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF +
Sbjct: 76 AIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNYAFETAFKAFVT 135
Query: 128 EALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAAL 177
E ++L + + + + + ++ L I KTA L +A+
Sbjct: 136 EPEDSLLIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDTIYELKTAALIESAM 195
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ G +A++ N+GIAFQ+ DD+LD +GK + D +N K T
Sbjct: 196 MIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDVVSSSEVLGKPVHSDEKNKKTTYV 255
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L + + QKA
Sbjct: 256 TLL--------------------------------------GIEEAARTVEELSQKAVSL 277
Query: 298 LRCLPDSSWKKS-LMEVVDFCLQR 320
L LP + + L +++ + R
Sbjct: 278 LHQLP---GRNAYLEQLLMQLIHR 298
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 132/330 (40%), Gaps = 51/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML + + ++ I S+ + + + Y + GGKRLRP+L A
Sbjct: 1 MLSTYIETNKKPFEKVMFDLIESEPIPSELKESMLYSLKVGGKRLRPILLFAVLESFNLA 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A A+E IHT +L+HDD+ LRRGK +V+G T++L GD LL+ AF
Sbjct: 61 PQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSLLTHAF 120
Query: 119 CMVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ E + + LSL+ ++ V+ E + +KT
Sbjct: 121 KVIAEDERLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIHVNKTGR 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++IA + V LK + +LG+AFQ+ DD+LD G +GKN+G D N
Sbjct: 181 LIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVEGSTAVLGKNVGSDLVN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T + +L + +
Sbjct: 241 GKSTYVSLT--------------------------------------SLTEAKNMLEEEI 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ AK L LP S+ L + D+ R
Sbjct: 263 KCAKVILHNLPVSTA--VLEAITDYIKDRQ 290
>gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
Length = 294
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 125/334 (37%), Gaps = 52/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + ++Y SGGKR+RP+L A +
Sbjct: 1 MSDFAQWMQAQGARTEAALQAALPDAGTVPHTLHEAMRYAALSGGKRVRPLLVHAAGEVS 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
ACA+E IH +L+H +DD LRRG+ + T++LVGD L +
Sbjct: 61 GAAPAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH-------VIKSK 168
QAF ++ + L LVA ++ + +D+ + + K
Sbjct: 121 QAFIVLAGAEPIAPAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEAMHRMK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A++ + +L + + AL Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 181 TGALLRASVRMGALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ KPT ++ L A
Sbjct: 241 AAHDKPTYVSLM--------------------------------------GLDAARELAG 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
S +A ++L + + L ++ D + R +
Sbjct: 263 SLRAEAYEALAGFGGRAAR--LRDLADLIVLRTH 294
>gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
HF0130_25O04]
Length = 277
Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 110/226 (48%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ + + S + + + ++ GGKR+RP+L D+ + ++ +
Sbjct: 32 LAFFENYLSDILDSLDRPVREFARRVLLGGGKRIRPLLVYRCGSDSPDVTDDLLKVSAIL 91
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H ATL+HDDV+D + +RR + G ++L+GD L S A + E +
Sbjct: 92 ELVHVATLVHDDVLDHAKIRRSRATIHTEIGEHAAILLGDALFSFALELATEFPTTRICN 151
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S GE+ Q N D+ DY I+ KT F A+ + + +AG +
Sbjct: 152 IVSSATRRTCSGEIMQTFARGNYDLGLPDYFSFIQDKTGEFFKASCQAGAFLAGHSECIL 211
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +G++LG+ +Q+ DD++D G+ + GK +G DF +GK TLP
Sbjct: 212 DLVGEFGLSLGLNYQIFDDLVDSFGKTDAAGKCLGTDFDSGKITLP 257
>gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
Length = 313
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 74/335 (22%), Positives = 132/335 (39%), Gaps = 56/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
K L+ + E+++ ++ + + + + Y + +GGKRLRPML T ML
Sbjct: 19 KSLDKAIAERAERIDGIVAGYLPKVEGFPRTVCEAMAYSVEAGGKRLRPMLMEETYRMLG 78
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D AIE IHT +L+HDD+ D+ RRG+ + +V+G ++L GD LL+
Sbjct: 79 GSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDALLNY 138
Query: 117 AFCMVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
A+ + + G +T E +V ++
Sbjct: 139 AYETACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEYVYEN 198
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + +++AG + +A++ ++G+AFQ+ DD+LD G+ +GK
Sbjct: 199 KTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDVCGDSMVLGKPTLS 258
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D NGK T I + +
Sbjct: 259 DEENGKITYVTIH--------------------------------------GIEKSRQYV 280
Query: 288 YSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++A L + DS + L ++V + + R
Sbjct: 281 RDLSERAVRELEEMDGDSEF---LRKLVLWLINRQ 312
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 16/288 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+E + +++ + I I + Y + +GGKR+RP+L AT
Sbjct: 5 EVEQFLQQQKQRLEESLPHYIARLNAPGTIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL+ AF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E + A + + ++ E ++ + KT
Sbjct: 125 QVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ ++ +L+A ++ L ++ +LG+AFQ+ DD+LD G ++GK +G D
Sbjct: 185 GKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDI 244
Query: 230 RNGKPTLPVILAFQRGTKREKNFW---KSTINDGKISVENLKKAFIIM 274
N K T P +L ++ K + +I+ L ++
Sbjct: 245 ENKKVTYPSLLTIAGAKEKLSFHIAEAKRYLQKAEINDSVLSYICDLV 292
>gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242]
gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii
DSM 6242]
Length = 300
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 77/310 (24%), Positives = 124/310 (40%), Gaps = 48/310 (15%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ +N +I D + VV ++ SGGK++RP++ L + + +N A AIE
Sbjct: 14 DAMNEMISDM--DDSPQMKKVVGHICRSGGKKVRPIILLLASRICGKGSENCTNAALAIE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IH+A+L+HDD++D+ +RRG +A +G ++L GD+++S++ ++ + E
Sbjct: 72 LIHSASLIHDDILDEGVMRRGVESAHKKFGPAAAMLAGDYMISKSIELISIYSTPVVQEF 131
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ S S++ Y I KTA LF+A+ + + IAG
Sbjct: 132 GRAGMAMAEGETIDIKSTSEDFAEMN--YFDCIDKKTASLFAASAVMGAYIAGADEKTAS 189
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
LK+YG LG A+Q+VDD+L+Y
Sbjct: 190 KLKNYGRKLGRAYQIVDDLLEYTQN----------------------------------- 214
Query: 253 WKSTINDGKISVENLKKAFIIMREN----RALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
D K S I R A+ A + AKD L S +
Sbjct: 215 -----IDNKKSDNKSISILQIYRRTMPYESAVEKAILLAMENVRMAKDILEEFDPSDSRS 269
Query: 309 SLMEVVDFCL 318
LM V D
Sbjct: 270 KLMTVTDHIT 279
>gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
Length = 347
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 16/295 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GK +RP L L + LA I+ +H TL+HDD+ DDS +RRG+ +
Sbjct: 54 PGKLIRPQLVLLACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIEDDSDMRRGRPTLWHL 113
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKS--------QEALEALSLVACTLAEGELRQLSLSK 152
WG + GD + A + + L V + EG+ +S
Sbjct: 114 WGLAQGINAGDGMFVIAHLAIHQLSDLGVPAERVLPILRRFDEVILHVCEGQFLDISFEG 173
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
NL ++ EDYL +I KTA+L + + +++AG + AL ++G +LG+AFQ+ DD+L
Sbjct: 174 NLGISTEDYLAMIGRKTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQIEDDIL 233
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
G GK D K +LP++ A + +++
Sbjct: 234 GIWGAPELTGKPRAADLYRRKVSLPIVHALRHAADA--ATLAEIYQQPDPDDAAVERVLA 291
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS------WKKSLMEVVDFCLQRL 321
I+ + + A + A +L L S + + + + L R
Sbjct: 292 ILDQAGSRAYCAELAAEHHHAALAALESLGRSEVAAVQAARDQIRAIAESLLGRQ 346
>gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
7_1]
gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
7_1]
Length = 326
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 9/321 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE- 58
M+E L + +E++ LI + V+ ++ GK R L L A +
Sbjct: 1 MIEILLKEWIEQIKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSN 59
Query: 59 --YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F EA+ LS + GE+ Q D++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFKNIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +G + Q L+ + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNPKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQNYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLP-DSSWKKSLMEVVD 315
++ L +S L ++++
Sbjct: 300 QLIKELGQNSEITVYLEKMLN 320
>gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
Length = 177
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
L D++ + + + + + ++ ++L GKR+RP + L + +
Sbjct: 7 LFSTVEADLKLLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEI 66
Query: 63 --NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
H LA E IHTA+L+HDDVVD+S LRRG ++ N+ +VL GDFL +Q+
Sbjct: 67 IPKHRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWY 126
>gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Haloquadratum walsbyi DSM 16790]
gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
[Haloquadratum walsbyi DSM 16790]
Length = 271
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 13/275 (4%)
Query: 15 VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V + + + D ++ D V ++ SGGKR+RP +T+ ++ V A A+E
Sbjct: 2 VEDRLESVVDAIDPAVLSDEVAHVALSGGKRVRPAVTILACEACGGAPEDAVDFAVAVEL 61
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H A+L+ DD++D S +RRG +A +G+ +++ D LL +AF ++ A
Sbjct: 62 VHNASLVVDDIIDRSDVRRGTESAWSAFGHGPALIASDGLLGEAFALLA-----ADEHAT 116
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+VA ++ E + + E +Y+ + + KT LF A+ EV ++ G
Sbjct: 117 EIVAESMVELGEGEATELVARPTNEAEYMQLARRKTGALFRASAEVGAVAGGADPFTIDL 176
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
Y +G+AFQ+ DDVLD + ++GK G+D +P+L + A E+
Sbjct: 177 FGEYAERVGVAFQIRDDVLDATADATDLGKPTGQDAAMDRPSLIQVTALSDTEANERAHN 236
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+S ++ N+ + +L A
Sbjct: 237 ESQQALDALAAANID-------DTESLGYLRDLAE 264
>gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
Length = 336
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 125/334 (37%), Gaps = 66/334 (19%)
Query: 13 EKVNFLILKRICS--DVE-----------MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++ + + + + +Y GGK LRP LTL A +
Sbjct: 41 QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100
Query: 60 RG--DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+N + ACA+E +H +L+H +DD LRRG+ + + T++L GD LL+
Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160
Query: 116 QAFCMVIETKSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
AF V+ A + Q + E +
Sbjct: 161 LAFGAVVAGVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEAIHL 220
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A+L + + +G + AL YG LG+AFQ+ DD+LD G+ + GK +G
Sbjct: 221 RKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAKTGKKVG 280
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D GK T P L + ++ R
Sbjct: 281 KDLELGKWTYPAFL--------------------------------------GVEESRRR 302
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A S +A +LR L D S + L+ + L+R
Sbjct: 303 ARSLVDQAVTALRPLGDRSAR--LVGLARTLLER 334
>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 298
Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + + E++ + Y + +GGKR+RP+L AT + A
Sbjct: 15 IKMLERELEESVSRLAAPEVLKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAAA 74
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+H +DD LRRGK + V+G ++L GD LL+ +F ++ + +
Sbjct: 75 AVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAPE 134
Query: 128 E---------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E G ++ D+ E+ ++ KT L + ++
Sbjct: 135 DADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSVA 194
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+L++ + S ++L + +LG+AFQ+ DD+LD G +GK +G D N K T P
Sbjct: 195 AGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEGNEEVLGKPVGSDETNNKSTYPS 254
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
IL + K ++ + + ++ I
Sbjct: 255 ILTMEGANKALEHHIGMAKARLQETGLEIQLLEEI 289
>gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 182
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+GE QL ++ Y+ KTA L + A + S++ G V++A YG N+
Sbjct: 7 QGEFMQLGSKEDEGERFSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGRNV 66
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
GIAFQLVDD+LD+ +++GK D R G T PV+ A + +
Sbjct: 67 GIAFQLVDDLLDFVSSQSDLGKPAAADLRLGLATAPVLFACDKYPELNAMIM-----RRF 121
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++A+ + ++ L T A + +A L DS K++L+ + + L R
Sbjct: 122 SEPGDVERAYDAVLKSDGLEHTRLLAQKHCSEAVRHLAPWTDSPEKQALISITEKVLNRK 181
>gi|325143454|gb|EGC65779.1| octaprenyl-diphosphate synthase [Neisseria meningitidis
M01-240013]
Length = 61
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ +
Sbjct: 14 EDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAV 61
>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
Length = 266
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+++ + + + + + + Y +F GKR+RP+LT+A A L ++ + + CAI
Sbjct: 9 DRIEDRLRELLVPQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLGGDEEDAITVGCAI 68
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
E IH +L+HDD+ +D+ RRG + +G +VL GD LL+ AF ++
Sbjct: 69 EMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTYAFELM 120
>gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306]
Length = 291
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 11/244 (4%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G + + + KT L
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RAAVRMGALTGGAALADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLP 237
T P
Sbjct: 243 STYP 246
>gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
Length = 297
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/318 (21%), Positives = 116/318 (36%), Gaps = 50/318 (15%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
V + K + + + + Y + +GGKRLRP+L + D A E +
Sbjct: 18 VKEFLSKE-EGFNKELCEAMNYSVNAGGKRLRPILLHTFYKLFGGDSDIVKPCMAAYEML 76
Query: 75 HTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
HT +L+HDD+ D+ RRG +G T++L GD LL QA+ I+ E
Sbjct: 77 HTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILAGDGLLHQAYETFIKIFDTEISTR 136
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSKTAVLFSAALEVSSLIA 184
+ L ++ + KT L A+ S++A
Sbjct: 137 TVKALKIFGDKTGINGMLGGQSADVLHTGEIISDELLYYIYEKKTGALIEGAMLTGSVLA 196
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + +K G +G+AFQ+ DD+LD G E+GK + D +N K T I
Sbjct: 197 GCNDEDLAKIKRVGELVGLAFQIKDDILDIYGNEKEIGKPLHSDEKNNKKTYITI----- 251
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PD 303
+ +E+ ++A D + L D
Sbjct: 252 ---------------------------------NGIEKSEHDIVVMSEEACDIVSSLGND 278
Query: 304 SSWKKSLMEVVDFCLQRL 321
+ +++++ + R
Sbjct: 279 VEERDFIIKLIKYLTDRT 296
>gi|220675926|emb|CAX12085.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
gi|220679659|emb|CAX12978.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
Length = 370
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 116/333 (34%), Gaps = 34/333 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ + + +R ++ L +
Sbjct: 45 SLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSRNNLQ-----MRGLVVLLMSKA 99
Query: 57 LEYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVWG 102
+ + LA E IHTA L+H +V+ + +G
Sbjct: 100 AGPSSSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFG 159
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDY 161
N+ +VL GDFLL+ A + + + +E +S + +G + S S + +T +
Sbjct: 160 NKMAVLSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEEDSLTVASW 219
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + + + + +A + YG +L + +L ++ + +E
Sbjct: 220 EDQAFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKSGSEG 279
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
+ ++ ++ E+ + + K +++ R +
Sbjct: 280 AVFHFDS--------APVVFHRQIVGPERWQQQLKQAQNMSRQIDYTKLRGLIKMERGVS 331
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+G KA ++++C P S + +L +
Sbjct: 332 QALDLCSYHGNKALEAMKCFPPSDARSALENMA 364
>gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
Length = 288
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 40/306 (13%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ ++ LI D I +VV ++ GGKR+RP++ + + + + A A+E
Sbjct: 14 DAMDELIENM--DDSSQIKNVVSHVCNYGGKRIRPIILMLSTDICGGDSKTSINAALAVE 71
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H+A+L+HDD++DD +RRG +A +G+ ++L GDFL+S++ ++ E
Sbjct: 72 LMHSASLIHDDLIDDGIIRRGVPSAHKKFGHSAAMLCGDFLISKSIELMSSYGHNAITEF 131
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + E +Y I KTA LF+A + + I+G + +
Sbjct: 132 GQAGMSMAHGETI--DLGGDDAGFVEVNYFDCIYKKTASLFAACASIGAYISGADDEMVH 189
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ YG +G A+Q+VDD+L+Y + + TLP I Q +
Sbjct: 190 RCRLYGEYMGTAYQIVDDLLEYLH------EIDDKSSVRKSVTLPQIYTKQMTHEE---- 239
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
A+ T + Y +AK+ + + K L++
Sbjct: 240 --------------------------AVNKTVDKVDEYVTQAKNIIVGFESENGKDKLLQ 273
Query: 313 VVDFCL 318
+ +
Sbjct: 274 ITNHIT 279
>gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
Length = 306
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 121/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN IL I + ++Y GGKRLRP L AT M
Sbjct: 9 DFNQQLAAHQQRVNQAILDFIAPLPFGNSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLANLDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L ++
Sbjct: 129 FSILAESPMPDVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQISLDDLEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A D+L L + S+ + L + F ++R N
Sbjct: 271 MDLYQEAIDALNALSEQSYNIAPLQALACFIIERDN 306
>gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9]
gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9]
Length = 300
Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 65/335 (19%), Positives = 114/335 (34%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L ++ N + + + + + + +KY GGKR RP LT T ML
Sbjct: 6 TLSQSLKHYQDRSNQHLAQWLEAQPFADQALVKTMKYGTLLGGKRARPFLTYITGQMLGA 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+HDD+ LRRG + + ++L GD L + A
Sbjct: 66 ECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAGDALQTLA 125
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + + A + A + G+ L ++
Sbjct: 126 FEILADGKLNDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKHVDLQQLETIHKHK 185
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ A + +V L + +G+AFQ+ DD+LD + +GK G
Sbjct: 186 TGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTETLGKPQGS 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ L + +
Sbjct: 246 DLALDKSTYP----------------------------------ALL----GLEGAQQKT 267
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A +L +P + L + ++R N
Sbjct: 268 QQLYQEALQALDAIPYN--TTQLEVFARYIIERNN 300
>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 313
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 126/336 (37%), Gaps = 46/336 (13%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + + +V + + + D + ++Y + GGKRLRP+L LA +
Sbjct: 8 SMRAWMDERLTRVEHALQEWVGVDEPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAACEAV 67
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D + ACA E IH +L+HDD +D+ LRRGK + +G ++L GD L +
Sbjct: 68 RGEADAALRAACATELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQA 127
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIK 166
AF ++ + C L ++ + EE + +
Sbjct: 128 LAFELLTPDDEVAVPVGMQARLCRLLARAAGSSGMAGGQAIDLASVGVKLDEERLRQMHR 187
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L A++ + + + + AL YG +G+AFQ+VDD+LD + +GK G
Sbjct: 188 LKTGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADSATLGKTAG 247
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D KPT +L R + + ++ L T
Sbjct: 248 KDAVQDKPTYVSLLGLARAQAHARELHAQALAALARLRNLSP------NQSSELDQTR-- 299
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L + D ++R +
Sbjct: 300 ----------------------ALRALADLVVERAH 313
>gi|194382874|dbj|BAG58993.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A Q+
Sbjct: 21 CPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 80
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + G ++ +A + ++ + T Y A Y +A + L S
Sbjct: 81 FPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPS 135
Query: 305 SWKKSLMEVVDFCLQR 320
+ +L+++ + L R
Sbjct: 136 PERDALIQLSEIVLTR 151
>gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
Length = 294
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 19/310 (6%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
ME+++ ++ + + S + + ++ + S GK+LR L L A + L+
Sbjct: 1 MERIDDILKEFVDSLNYPLASEMFSQV--SSGKKLRSKLILKIAGA----SEASFKLSSV 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+DDS +RRGK + ++G + S+++GD L S+ F I +
Sbjct: 55 VEIIHLASLLHDDVIDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGF-NEIVKFDMKIA 113
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S C L+ GEL + L + + +E YL +I K + A +
Sbjct: 114 DIISDAVCKLSIGELMDVELGSSFNADKEKYLKMIYFK---TAVLIEAAAKSAAILAGFD 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
Q YG NLG+AFQ+VDD+LD + +GK DF+ GK TLP I +++ +K
Sbjct: 171 EQKYGDYGKNLGLAFQIVDDILDITSDEKTLGKPAMNDFKEGKTTLPYIYLYEKLENEDK 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
K+ ++ + +E + + +A +G KA + SS L
Sbjct: 231 AILKNLFKK-ELDDNEILWIKSKFKEFDIINLSIKKAKDFGAKAIE-------SSQNTEL 282
Query: 311 MEVVDFCLQR 320
+V + R
Sbjct: 283 KMIVSSMIDR 292
>gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
Length = 410
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 71/352 (20%), Positives = 129/352 (36%), Gaps = 48/352 (13%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------DNHVLLAC 69
+L+ I S+ + + ++ + +GGKRLR +L+ + V
Sbjct: 59 RELLEGISSETLPLLEAIE-SLSTGGKRLRALLSYWGWRGAGGAPVTENRTSWSIVKAGM 117
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL--------------------- 108
A+E T+ L+HDD++D S RRG + +
Sbjct: 118 AVELFQTSALIHDDIIDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLT 177
Query: 109 ------------VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
G + A + +++ V + E E Q +L + L+V
Sbjct: 178 MAWSAEVFASLGEGAIYGAPARTIFDRMRTEVLAGQYLDVYSEVLETEDAQAALQRALNV 237
Query: 157 TEEDYLHVIKSK------TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
L +A LE + Q+ V +++G+ LG FQL DD
Sbjct: 238 IRFKSAKYSCEHPFTIGGALALQAAVLESGASAVSEQHPVLAGYRAFGLPLGEGFQLRDD 297
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
L G+ GK G+D R GK T+ V L +++ +++ D ++S E +++
Sbjct: 298 ELGVFGQPEVTGKPAGDDLREGKRTVLVALTSAVLDEKDAALLHNSLGDPELSDEQVERI 357
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+M + A E Q ++L + D +L ++V L+R
Sbjct: 358 RELMVSSGAFAKHEQLIEQKSQAVFEALEAMNLDELTHAALTDIVGRALRRK 409
>gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_27]
gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_27]
Length = 326
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 8/309 (2%)
Query: 3 MLEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+E L + +E+V LI + V+ ++ GK LR L L A +
Sbjct: 1 MIEILLKEWIERVKYYIHLIADY-SIKESQVGAVLDDVLNLSGKMLRSKLLLLCAFLGSN 59
Query: 60 ---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ LA +E H A+L+HDD+VDDS RRGKV+ + +G +V GDFL+++
Sbjct: 60 WKDHKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLIAR 119
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
F EA+ LS + GE+ Q D++E+ Y I+ KTA LF AA
Sbjct: 120 IFYYGAMENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFENIERKTAALFQAA 179
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + AG + Q LK + NLG+ FQL DD+LD+ E+GK +DF+NG T
Sbjct: 180 SYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKETHKDFQNGIYTF 239
Query: 237 PVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI+A + RE + K+S+ + + + + + + + +
Sbjct: 240 PVIMALKNPKAREVLLPIMRKNKEEKLSLAEILQLQNYIIQFGGIEASYEKIKYLSTINR 299
Query: 296 DSLRCLPDS 304
++ L +
Sbjct: 300 QLIKELGQN 308
>gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
[Ornithorhynchus anatinus]
Length = 301
Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 110/283 (38%), Gaps = 5/283 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + +S ++ LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQL---FSSYKEDLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +V+ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + T + +A + L + +L+
Sbjct: 246 YCVHYLEDVGSFEYTRQTLKALESEAYTQIEALGGNPELVALI 288
>gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 291
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 11/244 (4%)
Query: 5 EDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + + ++Y + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERSLEAGLPSATHAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLF 173
++ + L + + A G +D + KT L
Sbjct: 123 LLAAASTSAELRVGWMQSLATAAGAAGMCGGQALDMDATGQLQPLQDLQRMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +L G +Q L ++ LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RAAVRMGALTGGAAADDQQRLGAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLP 237
T P
Sbjct: 243 STYP 246
>gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina
98AG31]
Length = 429
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 65/358 (18%)
Query: 24 CSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALM---LEYRGDNHVL------------ 66
S+ + V KY + K LRP++ L + L +H+
Sbjct: 76 GSNQIKLDQVAKYYLSPSTDSKHLRPLIVLLVSKATANLSPTYPHHLHSFQLDINQSISP 135
Query: 67 -------------------------------LACAIEFIHTATLLHDDVVDDSALRRGKV 95
LA E IH A+LLHDDV+D ++ RR
Sbjct: 136 HSILTDHNPSASSSNPLNDPSSSSILPSQHRLAEISEMIHVASLLHDDVIDKASSRRSIP 195
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
+A +GN+ S+L GDFLL++A + S E +E +S + L EGEL QL+ + +
Sbjct: 196 SAPHEFGNKLSILAGDFLLARASIGLARLGSLEVVELISSIISNLVEGELMQLNSNGKSN 255
Query: 156 VTEEDYLHVIKSKTAVLFSA---------ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ A ++ + +G +LGIAFQ
Sbjct: 256 HQIWNEYLEKSYLKTASLMAKTARCATVLGGCGIHQGWEEGEKIKDGVYQFGKHLGIAFQ 315
Query: 207 LVDDVLDYRGEVNEMGKNIG-EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
++DDVLDY + +GK G D + G T P++ A + IN
Sbjct: 316 IIDDVLDYTSSASVLGKPSGGSDLKLGIATAPILYA-----SEQFPELNELINRKFNLEG 370
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRL 321
++++A ++ + + + A Y +A++ L+ +P++ + L ++ + R+
Sbjct: 371 DVERAQELVHRSNGISRSIELAQKYSNEAREFLKQSGIPENEARIGLEKLSWMVIDRV 428
>gi|317150896|ref|XP_001823830.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
Length = 342
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 53/290 (18%), Positives = 100/290 (34%), Gaps = 12/290 (4%)
Query: 14 KVNFLILKRICS-------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+V I I S +++ + YL + GK +R L A LE D +
Sbjct: 30 RVEESIQVDIQSTTHTDDEKEKILTGPLDYLRENPGKDIRAKLIDAFNEFLEVPNDKLDV 89
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ I+ +H A+LL DD+ + S LRRG A ++G ++ ++ A + +
Sbjct: 90 IKRIIDLLHNASLLIDDIQNSSTLRRGVPVAHSIFGVAQTINSANYAYFIAQRELTNLTN 149
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ L Q D + ++ +
Sbjct: 150 PLSFSIY---TEELIHLHRGQGMELHWRDTMQCPSEVEYIEMALDKTGGLFRLAIRLMQA 206
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+++ LG+ FQ+ DD + + + K ED GK + P+I + +
Sbjct: 207 ESASGTDYVPLVETLGLLFQIRDDYQNLQSDTYSTNKGFCEDIGEGKFSYPIIHSIRSRP 266
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ I+V K A + + E + S Q+A++
Sbjct: 267 GDLRLLSILKQRSEDITVR--KYAVEYIDSTGSFDYCERKIISLMQQARE 314
>gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. DR1]
Length = 303
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 76/343 (22%), Positives = 128/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L + +++ I + + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SLQPNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + G++ L +E
Sbjct: 121 ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATATSKMVCGQVLDLQAEAKQIAQDE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + I + L+ YG +G+AFQ++DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 ALGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L D++ K L+E+ F L R N
Sbjct: 263 LEQAQIYAKELHDQAFEALAYFGDNA--KELVEISQFLLARTN 303
>gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644]
Length = 362
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 69/314 (21%), Positives = 123/314 (39%), Gaps = 30/314 (9%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GGKR+RP + + + E +H A L+HDD++D S R
Sbjct: 47 FVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEAVLSACSGFELLHAAGLIHDDIIDASRTR 106
Query: 92 RGKVAARLVWGNQT----------------SVLVGDFLLSQAF------CMVIETKSQEA 129
RG AA + + + ++L+GD L A + + +++ +
Sbjct: 107 RGHPAAHITYAERHRASRFSGDSQIFGTGTAILIGDLALIWADVLVRGSRLPADAQARVS 166
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
++ + + L +S +++ + + + L+ + IAG
Sbjct: 167 PVWSAVRSEVMYGQLLDLISQARDDEDVDAALRVNRYKTASYTVERPLQFGAAIAGASPD 226
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ A +S+G LGIAFQL DD+L G+ GK G+D R GK T+ + A + +++
Sbjct: 227 LITAYRSFGAGLGIAFQLRDDLLGVFGDPEVTGKPSGDDLREGKRTVLLATALKLADEQD 286
Query: 250 KNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSW 306
IS +L + I+ + A+ TE + +A L S
Sbjct: 287 PEAAAFLRASVGTDISEADLARIRAILVDVGAVEHTERQIRVRTDEAVAVLEASSATSPA 346
Query: 307 KKSLMEVVDFCLQR 320
K L E+ QR
Sbjct: 347 KHQLAEMAIKVTQR 360
>gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ]
Length = 325
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 26/314 (8%)
Query: 23 ICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
I S+ + + ++++ + GGKRLRP+LT + A +IE +H A+L
Sbjct: 24 ISSNNCSKAVNELLQNSVLVGGKRLRPLLTYLVGHLYGVDFKTLDPYAKSIELVHAASLS 83
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDV+D++ RRG + + N+ +VL GD+LLS + + E + ++ V L
Sbjct: 84 HDDVIDNATTRRGVASINIQASNKKAVLAGDYLLSDVIVNLTNAGNLELVGEMAKVIQDL 143
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
A GE Q + D T E + KTA + S +++AG+ S + K G++
Sbjct: 144 AIGEWIQADAIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAGLSRSTIEKSKQMGID 203
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LGIAFQL+DD LD+ +E K+ D N + + +
Sbjct: 204 LGIAFQLMDDTLDF---SSESQKDANLDLDNELVNSVIFQWLSMHPVEFEKYRNGESLSK 260
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD------------SSWKK 308
+ E ++KA ++RE A + + A++ L + + KK
Sbjct: 261 LYNGEKIEKAVEVVREA---------ANKHIESARNLLEEIQKDLCTNEKEMKAFNKNKK 311
Query: 309 SLMEVVDFCLQRLN 322
++ + D+ QR +
Sbjct: 312 PILYIFDYLTQRRH 325
>gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
Length = 298
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ K + L+ + + S+ ++ + + ++Y+ GGKRLRP+L LA + + +
Sbjct: 5 NELKAWQQKAQAQTELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGD 64
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ AIE +H +L+HDD+ +
Sbjct: 65 ADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKY 109
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 55/324 (16%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ + ++ K + + I + ++Y + +GGKRLRPML T ++ +
Sbjct: 11 ITAIEQILKKYLPVKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDEELIEPFM 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF ++ +
Sbjct: 71 AAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKAFA 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+++ + E + V + SK + F L+ S+LI
Sbjct: 131 MCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSALIECA 190
Query: 187 QNS----------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
Q ++ +G+AFQ+ DD+LD V +GK I D +N K T
Sbjct: 191 MMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTSTVEVLGKPIHSDEKNEKTTY 250
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L + + + S +A
Sbjct: 251 VTLL--------------------------------------GIENAKEAVESLSMEAIH 272
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
L + S + L ++ + R
Sbjct: 273 LLHSI--SGENQFLEMLLKELIYR 294
>gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
Length = 275
Score = 72.3 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 13/279 (4%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK+LR L LA A N + AIE IH A+LLHDD++D+S LRRG + +
Sbjct: 8 GKKLRSKLLLAIA----GENANSYKICAAIELIHLASLLHDDIIDESKLRRGAKSVNAEF 63
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G + ++++GD L S+AF + +S LA GEL + SK+ + ++ Y
Sbjct: 64 GTKNALMLGDILYSKAF-YELSQLDACFASIISDAVVKLAVGELMDVEFSKSFNADKDKY 122
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L +I +KTAVL A+ +++ N +A YG NLG+AFQ++DD+LD +G+ +
Sbjct: 123 LKMIYNKTAVLIEASARCGAIL---ANLDEKAFGEYGKNLGLAFQMIDDILDIKGDEKTL 179
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK DF+ GK TLP I ++ ++ K+ + E + E +AL
Sbjct: 180 GKPAMNDFKEGKTTLPYIYLYENLNNEDRAQLKNLFQKDLNNDEKI-WIQTKFEETKALN 238
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A Y +A +++ + + L +++ + R
Sbjct: 239 KAILEAKEYAHQAALAIKDFSN----EKLQDIIQAMIDR 273
>gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653]
gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653]
Length = 288
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 120/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 242 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 263
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++L + F +R N
Sbjct: 264 SLLAPF--GEDAETLKQAARFIAERQN 288
>gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1]
gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1]
Length = 304
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 67/335 (20%), Positives = 135/335 (40%), Gaps = 59/335 (17%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVE-------MIPDVVKYLIFSGGKRLRPMLTLATALML 57
D+ +++V I + + + + ++Y GGKR+RP+L ++TA +
Sbjct: 8 NDVLGDALKRVQGEIDSVFDAFLPVPHDTSARLVEAMRYAAMGGGKRVRPLLLVSTAELY 67
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IH +L+H +DD LR GK V+ + T+VL GD L +
Sbjct: 68 GVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDDLRHGKPTVHKVYDDATAVLAGDALHA 127
Query: 116 QAFCMVIETKSQEALEAL----------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ ++++ S + + ++ + ++ +
Sbjct: 128 LAFEILADSQTSADPFVRSELIATLGKASGMGGMAGGQMMDMVADEEGVEYDLRTITRLQ 187
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L +A++E+ +++ V R L++Y ++G+AFQ+ DD+LD G+ ++ GK +
Sbjct: 188 QLKTGALLAASVEMGAILGKVAPEGRAHLRAYSRDIGLAFQIADDLLDVEGDADKAGKAL 247
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
+D GK T ++ +
Sbjct: 248 RKDDEQGKQTFVTLM--------------------------------------GVDKARE 269
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+A + +A L S +L + F ++R
Sbjct: 270 QARALVDQAVAHLSS--HGSEADTLRALARFIVER 302
>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
Length = 307
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 128/337 (37%), Gaps = 61/337 (18%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ L+ E +N ++ K + + +I + + Y + +GGKRLRP+L T M
Sbjct: 13 MEELQQKV----EHINNVLEKFLPVEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMF 68
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
AIE IHT +L+HDD+ +D+ RRGK V+G +L GD LL+
Sbjct: 69 GGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLN 128
Query: 116 QAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEEDYLH 163
A+ + E + + + + S + +T E
Sbjct: 129 LAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDF 188
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ + KT L +++ + +++AG + ++ LG+AFQ+ DDVLD + +GK
Sbjct: 189 IYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGK 248
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+G D +N K T L
Sbjct: 249 PVGSDEKNNKATYVTFE--------------------------------------GLDKV 270
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A++ L L L E+ ++ + R
Sbjct: 271 VSDVERISKEAEEQLDDLGYDDA--FLKELFEYLIHR 305
>gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13]
gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13]
Length = 304
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 120/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++L + F +R N
Sbjct: 280 SLLAPF--GEDAETLKQAARFIAERQN 304
>gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84]
gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7]
gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407]
gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84]
gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407]
gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7]
gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14]
Length = 329
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 12/294 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
+ +E+V +IL + + +V+Y + + GK LR L L A M E + +
Sbjct: 12 IERGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123
A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ + + +
Sbjct: 71 YFAAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGL 130
Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + T+ GEL QL + ++T + YL I+ KTA LF A ++
Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
S + G G LG+AFQL DD++DY+ +V E GK +D +NG T P++
Sbjct: 191 GSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGKPRLQDIQNGIYTAPLL 250
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
A + ++ + + E L+ + A+ TE SY +K
Sbjct: 251 FAMREDKSIQQQLRAYIQSP---TAEGLEILTDRIFATHAIAKTEKLIVSYLEK 301
>gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba]
gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba]
Length = 338
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 57/306 (18%), Positives = 122/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
++ ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSTNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T + +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLETLDAEARAEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis]
gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis]
Length = 337
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/286 (18%), Positives = 111/286 (38%), Gaps = 5/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D
Sbjct: 21 DEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPPEKLTQIGEIVQMLHNSSLLIDDIED 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ ++ L A V + EA + + L G+
Sbjct: 81 NSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEATKVYTEQLLELHRGQGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ + E ++ + ++ + + + ++ LG+ FQ
Sbjct: 141 EIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQLFSENKEDFTKLTAILGLYFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK PVI A + T+++ + +E
Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--TQKQDKQVLHILRQRTHDIEV 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K ++ + + T S +A+ L L + + L+
Sbjct: 256 KKYCISLLEKLGSFQYTRKVLESLDAEARAELARLGGNPFLDRLLN 301
>gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta]
gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta]
Length = 338
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 57/306 (18%), Positives = 122/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
++ ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSNNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T + +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLETLDAEARAEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 301
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 67/317 (21%), Positives = 123/317 (38%), Gaps = 49/317 (15%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ L+ + +V + + ++Y GKRLRP + + + + + ACA+E
Sbjct: 26 ALDELLPRADGPEV-RLTEAMRYAALGPGKRLRPYFAMEASRLFDIEERPVLRAACALEC 84
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+H +DD +RRG+ + T+VL GD L + AF +++ + E
Sbjct: 85 VHAYSLVHDDLPCMDDDDMRRGRPTLHRAYDEATAVLAGDALQTAAFDILLHEDTHEDAN 144
Query: 132 ALSLVACT------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+A Q+ + E + + KT LF+ A E+ ++A
Sbjct: 145 IRCALAARLSLASGARGMAGGQMVDLLGVRDDLEGVARMQRLKTGALFTYAFEIPLIVAR 204
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
QAL + ++G+A+Q+VDD+LD+ G+ +GK +D GK +L
Sbjct: 205 ANERHCQALTDFAHDIGLAYQIVDDLLDFDGDEAVLGKAAQKDAAQGKTNFVTLL----- 259
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ +R +A+ L
Sbjct: 260 ---------------------------------GVDQARHRVAQLADQARGHLDVF--GP 284
Query: 306 WKKSLMEVVDFCLQRLN 322
++L VDF L R +
Sbjct: 285 DAENLKASVDFVLNRRS 301
>gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 281
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 62/304 (20%), Positives = 106/304 (34%), Gaps = 53/304 (17%)
Query: 14 KVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + K ++E + + ++Y + +GGKR+RP+L A L ++ ACA
Sbjct: 12 RVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD LRRG+ + ++L GD L S AF ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
Query: 129 ALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + G+ L A++ ++
Sbjct: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRL 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P
Sbjct: 192 GALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP- 250
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ L ++ A +A +L
Sbjct: 251 ---------------------------------ALL----GLEAAKHYALELRDQALQAL 273
Query: 299 RCLP 302
Sbjct: 274 SPFD 277
>gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525]
Length = 357
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 67/345 (19%), Positives = 127/345 (36%), Gaps = 39/345 (11%)
Query: 8 TLKDM-EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLATALM 56
D+ ++V + + ++ + D + L+ SGGKR+RP + L
Sbjct: 22 ITDDLLQRVEDKLASFLTAERDRYAAMDERALAAVDALTDLVTSGGKRVRPTFCITGYLA 81
Query: 57 LEYRGDN--HVLLACAIEFIHTATLLHDDVVDDSALR----------------RGKVAAR 98
+ V A +E +H + L+HDD++D+SA R G
Sbjct: 82 AGGDPRDPGIVAAAAGLEMLHVSALIHDDILDNSAQRRGKPTIHTLYGDLHDSHGWRGES 141
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+G +L+G+ L + ++ L + + G+ + +
Sbjct: 142 RRFGEGIGILIGNLALVYSQE-LVCQAPPAVLAEWHRLCSEVNIGQCLDVCAAAEFSADP 200
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ V K+ V A + + A YG +G AFQL DD+LD G+
Sbjct: 201 QLSRLVALIKSGRYTIHRPLVMGANAASRPDLAAAYVEYGEAVGEAFQLRDDLLDAFGDS 260
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
E GK G DF K TL + A + ++ + + + E +++ + +
Sbjct: 261 TETGKPTGLDFTQHKMTLLLGWAM-----QRDTHIRTLMTEPGHTPEEVRR---RLEDTE 312
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
D E ++ + ++ P D W++ L ++ R N
Sbjct: 313 VPKDVERHIADLVEQGRAAIADAPIDPQWRQELADMAVRAAYRTN 357
>gi|213510982|ref|NP_001135248.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
gi|209155246|gb|ACI33855.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
Length = 309
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 100/284 (35%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D S
Sbjct: 13 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIEDSS 72
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ EA+ + L G+ +
Sbjct: 73 TLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVHVFTRQLLELHRGQGLDI 132
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E + + + LK LG+ FQ+
Sbjct: 133 HWRDTYTCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKR---DLKPLLDTLGLFFQIR 189
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + K+ ED GK + P I A + ++ + +V+ +
Sbjct: 190 DDYANLNSAEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKR 247
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T +A + L + + L++
Sbjct: 248 YCVDYLEKVGSFAYTRETLRGLEAEAYRLITDLGGNPELEGLVK 291
>gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
Length = 298
Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ + ++A A+E H
Sbjct: 18 EQLLNEIVIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHC 77
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ S A
Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVLMRLSPLLPAAQV 137
Query: 135 LVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLI 183
+ + G+ LS VTEE + KT L A V +
Sbjct: 138 VAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQ 197
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 198 HEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 258 QL--------------------------------------EEEIAVHYQIAMDSLRLFGI 279
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 280 KAA--ALIELTKQLQNRSN 296
>gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
Length = 299
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 68/321 (21%), Positives = 113/321 (35%), Gaps = 54/321 (16%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + + Y GGKRLRP L AT M A A+E
Sbjct: 15 NDALRQFIEPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGTMFGVSLTTLDAPAAAVE 74
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRG+ + +G ++L GD L + AF ++ + E
Sbjct: 75 CIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSDAPMPEVA 134
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + G+ L A++ +A +
Sbjct: 135 DRDRIAMISELAQASGVAGMCGGQALDLQAEGQQVDLAALERIHRHKTGALIRAAVRLGA 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 195 LSAGEKGRAALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP--- 251
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L +A + A+ SL
Sbjct: 252 -------------------------------ALL----GLEQARMKARDLIEDARRSLSE 276
Query: 301 L-PDSSWKKSLMEVVDFCLQR 320
L S +L + ++ +QR
Sbjct: 277 LAAHSLDTTALEALANYIIQR 297
>gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 287
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M ++ K +N + ++ SD +++ Y + +GGKRLRP+L LAT L
Sbjct: 1 MTTFKEFQAKYTPIINDFLEGQLAKESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDALG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ V AC IE IHT +L+HDD+ +D+ RRG++ + WG ++L GD L
Sbjct: 61 VEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQP 120
Query: 116 QAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + L + + G+ + + N D +EE H+ KT L
Sbjct: 121 LGIQWIAQAEHNWKLVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ +A + Q ++ + G ++QL DD++D E GK +D G
Sbjct: 181 ILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVG 240
Query: 233 KPTLPVI 239
K +
Sbjct: 241 KNNSLTM 247
>gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703]
gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703]
Length = 303
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 59/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M + +++N + + I + + +I + + Y GGKRLRP L +T +
Sbjct: 1 MTDFLEQLHAHHQRINTTLRRFISALPFQQIPLI-EAMAYGSLLGGKRLRPFLVYSTGRL 59
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
++ + A A+E IH +L+H +DD LRRG+ + +G ++L GD L
Sbjct: 60 FNLPLESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQ 119
Query: 115 SQAFCMVIETKSQEALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHV 164
+ AF ++ T+ + L + G+ L
Sbjct: 120 TLAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQIH 179
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
A++ ++ + V +L Y +G+AFQ+ DD+LD G+ GK
Sbjct: 180 RHKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSATTGKR 239
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G D + GK T P ++ L +
Sbjct: 240 QGADQQLGKSTYP----------------------------------ALL----GLAQAK 261
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKS----LMEVVDFCLQR 320
+A Q++ +L L + + L + ++ ++R
Sbjct: 262 AKALELYQESLAALDELEAAIAHPAAILPLRSLANYIVER 301
>gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840]
gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840]
Length = 304
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 68/327 (20%), Positives = 118/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D K T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAARKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFIAERQN 304
>gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Janibacter sp. HTCC2649]
gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Janibacter sp. HTCC2649]
Length = 366
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 115/334 (34%), Gaps = 38/334 (11%)
Query: 22 RICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATL 79
+ DV +++ V + +GGKRLR D V LA A+EF A L
Sbjct: 36 ELGPDVTDLLDRVG--SLLAGGKRLRAAFLYWGHRAAGRADSDELVRLATAMEFFQAAAL 93
Query: 80 LHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQAFCMVIETKSQEA----- 129
+HDDV+DDS RRG AA F ++ A +
Sbjct: 94 IHDDVMDDSDTRRGMPAAHRALAAVHTERGWGGDDARFGVAGAILAGNLCLTWTDELVAT 153
Query: 130 -----------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ L G+ + S + +++ + + +A
Sbjct: 154 SGLGVEDLARGRVVFDRMRTQLMAGQFLDVVDSVRPWDGLPASERIERAQRVIRYKSAKY 213
Query: 179 VSSLI-------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
G+ + L SYG++LG AFQL DD+L G+ GK G+D R
Sbjct: 214 TVEHPLLIGATAGGLGEADLAHLSSYGLDLGHAFQLRDDLLGVFGDPEATGKPAGDDLRE 273
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T+ + + ++ + + + + ++ + A+ E
Sbjct: 274 GKRTVLIAHTLSGTDDAGRELLRTALGNASLDAAAIDTLRELITASGAVDAVEAEIDRLA 333
Query: 292 QKAKDSLRC----LPDSSWKKSLMEVVDFCLQRL 321
A+ SL PD L ++V+ R
Sbjct: 334 TSARASLAAATGVAPD--AAAVLDQLVEISTART 365
>gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum
PN500]
Length = 300
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 112/292 (38%), Gaps = 9/292 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
DV ++ + KY+ + GK +R +L A L+ + +A ++ +H ++LL DD+
Sbjct: 13 DVALL-EPYKYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQALHMSSLLIDDIE 71
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ + + A + A L G+
Sbjct: 72 DNSKLRRGMPVAHDIYGYAQTINCANTVYFLAMDECNKLGKPAATTIFIEEMIRLHRGQG 131
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ ED + + + + +LG+ +
Sbjct: 132 YDILWRDTNSCPTEDEYKEMVGEKTGGLFRLGLRLLQT---FSENKTDYSKLVEDLGLYY 188
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD ++ ++ K+ ED GK + P+I A + + + ++E
Sbjct: 189 QIRDDYINLVSADYQVNKSFCEDITEGKFSFPIIKAIH--SNPSDHRLLLILKQKTENIE 246
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ A ++++ AL T+ + ++ + L + + L +++D
Sbjct: 247 VKQHALEYIKKSGALKYTKEQMDITRERIITQISQLGGNPF---LQKILDKL 295
>gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 300
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 117/310 (37%), Gaps = 49/310 (15%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ + +++ GGKRLRP L + +A + + A A+E IH +L+H
Sbjct: 31 SVAGAPARLLAAMRHGALGGGKRLRPFLVIESARLFGADLQAAIGAATALECIHCYSLVH 90
Query: 82 --DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL------ 133
+DD LRRGK + T++L GD LL+ AF +V + +
Sbjct: 91 DDLPSMDDDDLRRGKPTVHRAYDEATAILAGDGLLTLAFGLVAGEEGLSPKARVALVALL 150
Query: 134 -SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G ++N ++E++ + KT L + A E +++A + R
Sbjct: 151 ARDAGAAGMVGGQVLDLAAENAVLSEDEIARMQAMKTGALIAFACEAGAIVADAGAAERA 210
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L+ +G +G+AFQL DD+LD + +GK G+D GK TLP +
Sbjct: 211 RLRRFGEIVGLAFQLADDLLDETADAAVLGKAAGKDRERGKKTLPALH------------ 258
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ T R +A+ L D L+E
Sbjct: 259 --------------------------GIDWTRARLDRLVAEAEAELAPFGDKGG--VLIE 290
Query: 313 VVDFCLQRLN 322
F R +
Sbjct: 291 AARFVANRTS 300
>gi|50539770|ref|NP_001002351.1| decaprenyl-diphosphate synthase subunit 2 [Danio rerio]
gi|49904368|gb|AAH75908.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
Length = 370
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 116/333 (34%), Gaps = 34/333 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + + ++ + + +R ++ L +
Sbjct: 45 SLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSRNNLQ-----MRGLVVLLMSKA 99
Query: 57 LEYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVWG 102
+ + LA E IHTA L+H +V+ + +G
Sbjct: 100 AGPSSSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFG 159
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDY 161
N+ +VL GDFLL+ A + + + +E +S + +G + S S + +T +
Sbjct: 160 NKMAVLSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEEDSLTVASW 219
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + + + + +A + YG +L + +L ++ + +E
Sbjct: 220 EDQAFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKSGSEG 279
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
+ ++ ++ E+ + + K +++ R +
Sbjct: 280 AVFHLDS--------APVVFHRQIVGPERWQQQLKQAQNMSRQIDYTKLRGLIKMERGVS 331
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+G KA ++++C P S + +L +
Sbjct: 332 QALDLCSYHGNKALEAMKCFPPSDARSALENMA 364
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
Length = 300
Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 57/329 (17%)
Query: 9 LKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + ++ + + ++I + + Y + +GGKRLRPML T +
Sbjct: 12 EQKVREIEDSLQNYLPKQKGYQKIIMEAMGYSLLAGGKRLRPMLMKETYTLFGGHSKVIE 71
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
AIE +HT +L+HDD+ +D+ RRG+ +V+G ++L GD LL+ AF ++
Sbjct: 72 PFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDALLNYAFETAVK 131
Query: 124 TKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLF 173
E +++++ + + + + +D L I KT L
Sbjct: 132 AFVLEPEDSMTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALI 191
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +++ G + ++ +G+AFQ+ DD+LD E+GK I D +N K
Sbjct: 192 EAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQEELGKPIHSDEKNEK 251
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L + D + ++
Sbjct: 252 TTYVTLL--------------------------------------GIDDAKKVVEEKSEE 273
Query: 294 AKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
A L+ LP ++ + L E++ + R
Sbjct: 274 AISLLQTLPNENPY---LEELLMELIHRK 299
>gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330]
gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365]
gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330]
gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365]
gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/327 (21%), Positives = 123/327 (37%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+++ + C L +++ E + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFIAERQN 304
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 133/335 (39%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L++ ++V + + + + + + + Y + +GGKRLRP+L AT
Sbjct: 6 NLKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKD 65
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACA+E IHT +L+H +DD LRRGK V+G T++L GD LL+ +F
Sbjct: 66 ESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSF 125
Query: 119 CMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E E + L + +T ++ ++ KT
Sbjct: 126 QLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKT 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L ++ +++A ++ L+ + ++G+AFQ+ DD+LD G ++GK IG D
Sbjct: 186 GKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDT 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T P +L + + +
Sbjct: 246 ENEKTTYPSLL--------------------------------------GMEAAKEKLQY 267
Query: 290 YGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A SL + L E+ + +R +
Sbjct: 268 HVEQALLSLRQAQIKHG----LLEEICLYIAKRDS 298
>gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis]
gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KY++ GK++R L+ A L D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ A+ + L G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLLELHRGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E + + + +S + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQL---FSSNDKDLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +V+
Sbjct: 188 DDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKT 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T +A + L + SL+E
Sbjct: 246 YCVHYLEKVGSFEYTRVTLRELEAEAYKQIESLGGNPQLVSLIE 289
>gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
Sheeba]
gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
Sheeba]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 24/323 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP--MLTLATALMLE 58
++ +++ ++++ + + S + K LR ML L +
Sbjct: 6 LQAIQNKIASWIKEIESGFIDELFSHI------------GPSKMLRSKLMLALLDTKIDA 53
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D L +E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF
Sbjct: 54 IILDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAF 113
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
S+ +++ + ++ + D +
Sbjct: 114 ----FELSKMENLIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFMEA 169
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+A + N + ++G+N G+AFQ++DD+LD +GK DF+ GK TLP
Sbjct: 170 SLKSMAILLNKDAKIYANFGLNFGMAFQIIDDLLDITQNATTLGKPNFSDFKEGKTTLPY 229
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L +++ K E+ S S E ++ ++ + +T A Y KA + +
Sbjct: 230 LLLYEKLNKSEQGLLISYFKQD--SDEIIEWTKEKFKQYAIIEETLKIAQVYSNKALEVI 287
Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321
+ L ++ + R
Sbjct: 288 ----EGENNLILEKLAQDVIYRT 306
>gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 111
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ E +N + K + + D + Y + +GGKR+RP+L L +A
Sbjct: 2 DIKQYLKSQAEFINKHLEKELSRGTPQKLFDAMHYSLNAGGKRIRPVLVLESAKACGKNN 61
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVW 101
+ + +A A+E IHT +L+HDD+ LRRGK V+
Sbjct: 62 LEGIIDIALAVEIIHTYSLIHDDLPSMDNDDLRRGKPTCHKVY 104
>gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367]
Length = 300
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 72/322 (22%), Positives = 125/322 (38%), Gaps = 51/322 (15%)
Query: 14 KVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLAC 69
+N + + I S + + Y + +GGKRLRP+LT+AT L + H
Sbjct: 17 ALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVM 76
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------V 121
A+E +HT +L+HDD+ LRRG+ + +G + L GD LL+ AF
Sbjct: 77 ALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLP 136
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + + + S+++++ + K KT L A++
Sbjct: 137 ATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGL 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + A + G+AFQ+ DD+LD EMGK +D K T P
Sbjct: 197 ILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGK-- 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ N+AL+DT + +L+ L
Sbjct: 255 -----------------------------LGLIGANQALIDT-------IHSGQAALQGL 278
Query: 302 PDSSWKKSLMEVVDFC-LQRLN 322
P S+ + L + +R+N
Sbjct: 279 PTSTQRDDLAAFFSYFDTERVN 300
>gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium
glutamicum ATCC 13032]
Length = 366
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 77/328 (23%), Positives = 123/328 (37%), Gaps = 36/328 (10%)
Query: 28 EMIPDVVKYL---IFSGGKRLRPMLT---LATALMLEYRGDN---HVLLACAIEFIHTAT 78
+ D V +L + +GGKR+RP+ A + + + A ++EFI
Sbjct: 38 APVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACA 97
Query: 79 LLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVI 122
L+HDD++D S RRG +G S+L GD L A M+
Sbjct: 98 LIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQ 157
Query: 123 ETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ ++ + + L S + E A +
Sbjct: 158 DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARP 217
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+
Sbjct: 218 LHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTV 277
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ LA QR K+ + S E++ +R A + E R +
Sbjct: 278 LLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVITEHIRATGAEEEVEQRISQLTESG 337
Query: 295 KDSLR--CLPDSSWKKSLMEVVDFCLQR 320
L +PD + L + +R
Sbjct: 338 LAHLDDVDIPD-EVRAQLRALAIRSTER 364
>gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
Length = 371
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 77/328 (23%), Positives = 123/328 (37%), Gaps = 36/328 (10%)
Query: 28 EMIPDVVKYL---IFSGGKRLRPMLT---LATALMLEYRGDN---HVLLACAIEFIHTAT 78
+ D V +L + +GGKR+RP+ A + + + A ++EFI
Sbjct: 43 APVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACA 102
Query: 79 LLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVI 122
L+HDD++D S RRG +G S+L GD L A M+
Sbjct: 103 LIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQ 162
Query: 123 ETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ ++ + + L S + E A +
Sbjct: 163 DSGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARP 222
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+
Sbjct: 223 LHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTV 282
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ LA QR K+ + S E++ +R A + E R +
Sbjct: 283 LLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVITEHIRATGAEEEVEQRISQLTESG 342
Query: 295 KDSLR--CLPDSSWKKSLMEVVDFCLQR 320
L +PD + L + +R
Sbjct: 343 LAHLDDVDIPD-EVRAQLRALAIRSTER 369
>gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFVAERQN 304
>gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
Length = 289
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 38/307 (12%)
Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
K+M +N I + + ++ I + + + + GKRLRP+ L A + + + A
Sbjct: 8 KEMRAINEGIDQLLAGVELPEIRQGMAHSLKTSGKRLRPLTLLIMAELNGGTVEKALNAA 67
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHTA+L+ DD++D+ RRG++ + +G + + D+L+S+A + ++
Sbjct: 68 LGIECIHTASLIQDDILDEGLKRRGELTSHEKFGIFIATVSADYLISRAVMLYSGYDAKS 127
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+ L ++ E YL ++ KTA F++ E+ + IAGV +
Sbjct: 128 IEAFGRMGLELAEGEVL--DIKTRRSKTDEAYYLECVRRKTATAFASCFEIGARIAGVSD 185
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + G GIA+Q+VDD++++ +E ++ + +
Sbjct: 186 DKAELCRKMGEEFGIAYQIVDDLIEFTRIDDENKISLQQSYILPLMY------------- 232
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
M +A+ + + + SL D K
Sbjct: 233 ----------------------LETMPREQAIDACMKQVEKRIEFIEQSLGEFDDGEPKD 270
Query: 309 SLMEVVD 315
L EVVD
Sbjct: 271 KLREVVD 277
>gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 268
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 110/302 (36%), Gaps = 51/302 (16%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89
+ ++Y GGKRLRP L AT M A A+E IH +L+H +DD
Sbjct: 3 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 62
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----------CT 139
LRRG + +G ++L GD L + AF ++ + E + +
Sbjct: 63 LRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAG 122
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ G+ L+ + A++ +A + + L Y
Sbjct: 123 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 182
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 183 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP---------------------- 220
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCL 318
++ L +A + A+ SL L S +L + ++ +
Sbjct: 221 ------------ALL----GLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYII 264
Query: 319 QR 320
QR
Sbjct: 265 QR 266
>gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 394
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 68/350 (19%), Positives = 125/350 (35%), Gaps = 53/350 (15%)
Query: 4 LEDLTLKDMEK---VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
LE+L + + + R+ D ++ D++ K LRP L +AT L
Sbjct: 16 LEELIAEQRRRSPGIEDRTEGRLEGDPYGPVLYDLMLDYPLREAKGLRPALCIATCRALG 75
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A +E H A L+HDDV D S +RRG G +V VGD +L+
Sbjct: 76 GNLEAALPTASVLELYHNAFLVHDDVEDRSHVRRGGPTLHAAHGQAIAVNVGDGMLALTL 135
Query: 119 CMVIETKSQE---------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + A + +++++DY+ ++ KT
Sbjct: 136 RPLLANIERVGLGPALRILEAMAEMSERTVEGQAMELDWIRRNTWELSDDDYIEMVVRKT 195
Query: 170 AVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
F +L A V + L+ + +L +AFQ+ DDVL+ G +E+GK+ D
Sbjct: 196 GWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQIQDDVLNLVGGADEIGKDARGD 255
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND----------------------------- 259
GK TL ++ A + +++ + +
Sbjct: 256 LWEGKRTLVLLHALRTAAPADRDRAVAILAKSVPEVSLAGVPSLLARLEDQGQLAPAGRA 315
Query: 260 ---------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
S + ++ ++ RA + + A+ SL
Sbjct: 316 ELERALGLAELRSAAEVDALMELIEAQGSIDHARRRAREHLEAARASLEA 365
>gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
Length = 334
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 12/295 (4%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ +++ + YL K +R LT A L + +++ I+ +H A+LL DD+
Sbjct: 36 EEKVLTAPLDYLRALPSKDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDIQ 95
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ + A + + + A + L G+
Sbjct: 96 DSSKLRRGVPVAHHIFGIAQTINSANLAYFIAQRELEKLTNPRAFAIYNEELINLHRGQG 155
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
+L ++ TE++YL +I+ KT LF A+ + +++ S LG
Sbjct: 156 MELHWRESLHCPTEDEYLRMIQKKTGGLFRLAIRLL----QGESASDDDYVSLIDTLGTL 211
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K ED GK + PVI + + + + V
Sbjct: 212 FQIRDDYQNLQSDIYSKNKGYCEDLTEGKFSYPVIHSIRSRPGD--VRLINILKQRSEDV 269
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-----SWKKSLMEVV 314
+ A + + + + S ++A++ L L +S + L ++
Sbjct: 270 MVKQYAVQHIESTGSFAFCQNKIQSLVEQAREQLAALENSSSCGGPVRDILDKLA 324
>gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19]
gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19]
Length = 288
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 61
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 182 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 241
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 242 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 263
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 264 SLLAPF--GEDAEPLKQAARFIAERQN 288
>gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445]
gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFIAERQN 304
>gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium
BAC17H8]
Length = 341
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/317 (18%), Positives = 111/317 (35%), Gaps = 11/317 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E ++ I++R+ E + + + S GK LR + L A L + A AIE
Sbjct: 27 EIIHGFIIERMPKIGEPLSEAALHHFASPGKMLRAKMALRAADHLNVDRYAALHWAAAIE 86
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALE 131
+H A+L+HDD+ D LRR + A V+G ++ +GD+L++ +F + +
Sbjct: 87 VLHNASLIHDDICDGDRLRRERPAVWSVYGRDVALTLGDWLVALSFELAAEAAQRAQTPM 146
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ ++A + + V + D+ A +
Sbjct: 147 LVKILATHMKTTTDGEAREFDVQPVRDWDHYLKGAGDKTAPLLTAPLEGVAAMALHGGSA 206
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ LG A+Q+ +D+L++ G R + + + K
Sbjct: 207 PIIGDCFRALGNAYQIANDILNFSGGDGANTCGSDLGRRAPNGVVVLFRQQLDAQGQSKF 266
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP------DSS 305
E L+ +R + A + R S A LP +
Sbjct: 267 DDWYACGA----SEGLEAWVDELRASGAPAEAARRMESLLGDATAYAGRLPTELSAVITP 322
Query: 306 WKKSLMEVVDFCLQRLN 322
++ L +V + LN
Sbjct: 323 IQQLLQQVCLKSVASLN 339
>gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
Length = 291
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 51/303 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + Y + +GGKR+RP+L + + + L C IE IHT +L+H +DD
Sbjct: 30 LYKAMNYSLLAGGKRIRPVLMQLAYEAVGGKAEIDAYL-CGIEMIHTYSLIHDDLPAMDD 88
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
RRGK+ V+G T++L GD LL+ AFC+++E + L+
Sbjct: 89 DDYRRGKLTNHKVFGEATAILAGDALLNDAFCLMLEDALKSDSMEKVRAIHVLSMASGSA 148
Query: 148 LSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + E + + +KT L SAA ++ +++ G L++YG
Sbjct: 149 GMIGGQILDMESENKAIDQDTLDLIHLNKTGALISAATKMGAILGGGSPREVSLLEAYGK 208
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G FQ+VDD+LD + E+GK I D +N K T
Sbjct: 209 YIGKVFQIVDDILDQTSTIEELGKPINSDEKNHKNTYLNFYT------------------ 250
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ A KA L + D + L ++ +
Sbjct: 251 --------------------IEKCYEIAEELTTKAIGLLDQI-DGD-TQLLKDLAQQLIM 288
Query: 320 RLN 322
R N
Sbjct: 289 RRN 291
>gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815]
gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
Length = 291
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++V + + + ++ + + ++Y + GGKR+RP+L A + + + +
Sbjct: 5 LDRVERALEQYLPAESIEPARLHEAMRYAVLGGGKRVRPLLCHAAGELAGAKAECLDAAS 64
Query: 69 CAIEFIHTATLLH 81
A+E IH +L+H
Sbjct: 65 AALEMIHVYSLVH 77
Score = 41.1 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A A D+L + + L E+ D + R++
Sbjct: 250 GLDASRTLAAQLRSDAHDALAPF--GARAQRLAELADLVVNRVS 291
>gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870]
gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya]
gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10]
gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94]
gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1]
gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1]
gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292]
gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1]
gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33]
gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1]
gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94]
gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68]
gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99]
gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28]
gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFIAERQN 304
>gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950]
Length = 359
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/315 (20%), Positives = 98/315 (31%), Gaps = 26/315 (8%)
Query: 32 DVVKYLIF---SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ V ++ SGGK LR L + A + E +H LL DDV+D S
Sbjct: 43 EAVGDILADFVSGGKCLRSTFVYLGWLCGAPADPAALRAAASFELVHAFALLQDDVMDGS 102
Query: 89 ALRRGKVAARLVWGNQT-----SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+RRG+ +A +G F S A +
Sbjct: 103 DVRRGRPSAHRQFGRWHRERGLPGASRRFGESAAILLGDLCLIWAEQMLRDSGIDPRRLQ 162
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTA-----------------VLFSAALEVSSLIAGV 186
+ ++ + +I LE+ + +AG
Sbjct: 163 LAWPRYDAMRTELAVGQFADLINDARQAPGLEFVLDVARRKSGNYTVRRPLEIGAAMAGC 222
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L YG +G AFQL DDVL G GK D K T V+ A Q
Sbjct: 223 GAHTLCQLGRYGRAVGEAFQLRDDVLGVFGSPAVTGKASAIDLLERKATSVVVAAHQLAD 282
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSS 305
+ N + + + + ++ A+ E A+ L LP +
Sbjct: 283 PATRRELTELANREALGRDAIDRWKALIIGTGAVGLIEEMIGDRVASARAHLGDLPIEEP 342
Query: 306 WKKSLMEVVDFCLQR 320
+ +L E+ C R
Sbjct: 343 VRIALAEMAAACTDR 357
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 73/329 (22%), Positives = 122/329 (37%), Gaps = 53/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ML+ K + N + S +++ D +KY I GGKR+RP+L L+T + +
Sbjct: 3 MNMLKIEINKWL---NDYFENK-GSYNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDN 58
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL++A
Sbjct: 59 YKDIMPMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAM 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ AL + + +D+ E I + + +
Sbjct: 119 NVMFNYSLTHDKVALMASKVISEAAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQ 178
Query: 179 VSSLIAG-------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + L +G LG+AFQ+ DD+LD G+ +GK + +D N
Sbjct: 179 LIKSSIIAGAILGGASKENLEILDEFGSKLGLAFQIKDDILDVIGDSKVLGKEVHKDDEN 238
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T L +
Sbjct: 239 NKTTFISCF--------------------------------------GLEKCKELCVELT 260
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ L + K L + F ++R
Sbjct: 261 EQCIKLLSYI--GKDTKQLENIALFLMKR 287
>gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 386
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 82/334 (24%), Positives = 136/334 (40%), Gaps = 19/334 (5%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATAL 55
L + V+ + I + E + V Y +G GK +RP L L A
Sbjct: 52 LLSESRASVDPELRSAIATLPESMRRVALYHFGWQHADGTPAAGNAGKAIRPALVLTAAA 111
Query: 56 MLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
L G + A E +H TLLHDDV+D A RR + A V+G+ ++L GD L
Sbjct: 112 ALGGPGARAAAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDAL 171
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-----HVIKSK 168
+ A + + A + +A + E Q + + ++ + ++K
Sbjct: 172 QALALRLFAADPHPASAAAATRLADCVMELCEGQHADTAMERRPPDEVTLDETLVMAEAK 231
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A V +L AG +AL ++G G+AFQL+DDV+ G+ GK G D
Sbjct: 232 TGALLGCACAVGALYAGAATEDVEALDAFGREAGMAFQLIDDVIGIWGDPRHTGKPAGAD 291
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K +LPV+ A GT + + E+L++ + + + +A
Sbjct: 292 LAARKKSLPVVAALTSGTPAAAELAELYTGPYDENKEDLERTALAVERAGGRDWAQAQAA 351
Query: 289 SYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRL 321
+A L +P+ L+ + +F +R
Sbjct: 352 DRMARAMQELARAVPEPEAAGGLLALAEFVTRRS 385
>gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
Length = 332
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 6/314 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70
++ V + E I ++ + + GK +RP LTL + + + + L +
Sbjct: 20 LQAVLEDMSASWHIGFEEIDTAIRSQLNA-GKLIRPALTLLFSRLSDNPYNAKAISLGAS 78
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H ATL+HDD++D+S LRRG + + +G T+V GD+LL+ F ++ A
Sbjct: 79 LELLHLATLIHDDIIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAAN 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + GEL Q NL YL IK KTA LF ++ + +
Sbjct: 139 KLALKALQEILFGELVQKQNRYNLSADFNSYLTQIKGKTAALFRLSVSFGVISGDNYSEP 198
Query: 191 R-QALKSYGMNLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + G N+G+ FQL+DD LD+ ++ GK +G+D RNG T P++ A
Sbjct: 199 LLETVSHLGENIGVTFQLLDDYLDFESITQDLSLGKPVGQDIRNGIYTAPILFALADPV- 257
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
IS + ++ E+ A+V +Y + K ++ LPD +
Sbjct: 258 ISDKIIPLLAKRDDISDIEMMTLHTLITESNAMVKLSDLLTNYTESLKQMIQSLPDEGIR 317
Query: 308 KSLMEVVDFCLQRL 321
L ++ L R
Sbjct: 318 LQLEQLSGILLNRK 331
>gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
Length = 314
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 109/292 (37%), Gaps = 8/292 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + Y++ GK++R L A L+ + + + +H ++LL DD+ D
Sbjct: 19 DEKLLQPFTYILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLIDDIQD 78
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ +++L A VI EA + + L G+
Sbjct: 79 NSILRRGIPVAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLELHRGQGM 138
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ N E + + + L G+ FQ
Sbjct: 139 EIYWRDNFICPSEAEYRTMTIRKTGGLFNLAVRLMQLFSDCKEDFTPLAGIL---GLYFQ 195
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK + P+I A Q + + +VE
Sbjct: 196 IRDDYCNLCLQEYTENKSYCEDLSEGKFSFPIIHAIQSNADD--GQVLNILRQRTKNVEV 253
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ ++ + + T ++A++ + L + + L+ V+D L
Sbjct: 254 KRYCVNLLDKFGSFAYTRQILSDLDKQAREEVERLGGNPY---LIAVLDELL 302
>gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 7 LTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + + + I + + +V+ L GK LR L LA V
Sbjct: 1 MVAELIPAIQARIQSFLEEVKSPQVLKMVQNL--GQGKMLRSQLILAICS----NHPQIV 54
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
IE I +A+LLHDDV+D + RRG + +GN ++++GD S+AF +
Sbjct: 55 DFCAIIEMIQSASLLHDDVIDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAF-CELANF 113
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S+E ++ ++ L+ GE++ + + + YL I+ K+A L +A+ ++L+ G
Sbjct: 114 SKEIVQLIAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASLIAASSCGAALLQG 173
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
++ S + +G + G+AFQ+VDD+LD +GK DF+ GK TLP IL Q+
Sbjct: 174 LEPSKY---RDFGRHFGMAFQMVDDLLDITQSQEVLGKPALSDFKEGKSTLPYILLHQKL 230
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ S S E + +E + A Y A +++ +
Sbjct: 231 NPADQKKLASYFKVE--SEEVQEWCLEKFKEFGIAQEVLKEARGYVDLALEAI----NGE 284
Query: 306 WKKSLMEVVDFCLQRL 321
+L + L+R
Sbjct: 285 DNVALERMASAILERT 300
>gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium
violaceum ATCC 12472]
gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium
violaceum ATCC 12472]
Length = 338
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 12/291 (4%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LRP L + E ++ E IH A+L+ DDV DDS LRRG A
Sbjct: 46 GKMLRPFLVCSVMQAFERDPRRTPVVVAIAEIIHAASLVLDDVADDSPLRRGGPTAHRQV 105
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G + + G L+ F ++ S E +A +A +
Sbjct: 106 GVRVAGAAGSAWLNACFQLLAADDSGLEPEQAQRLADEIAWEHWVTGVGTTIDTTWPWMG 165
Query: 162 ----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
V+ T+ + L++ ++ AG + G LGIAFQ++DD+
Sbjct: 166 RLDGTPAQYLQSVVHRSTSYTYRLPLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDI 225
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
L+ + ++ GK + ED GK L V+LA +R E+ + + L +A
Sbjct: 226 LNVQPGDDKWGKALAEDITQGKINLQVLLALERLGSAERARLVEILQSRTADPQTLAEAV 285
Query: 272 IIMRENRALVDTEYRAYSYGQ--KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+M + A A Y +A + + ++ VD+ + R
Sbjct: 286 ALMAGSGAFDAARDIAQGYIDSTQAIVAGMDFLNPVDRERFSAFVDYVIHR 336
>gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/318 (19%), Positives = 121/318 (38%), Gaps = 52/318 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
++ + D + + +++ + GGKR+RP+L L+ + + ++ AIE +H
Sbjct: 19 NTLIDDLPHDAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVPKGDQMAISMAIECVHA 78
Query: 77 ATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+H +DD LRRG+ + + T++L GD L + AF + + +
Sbjct: 79 YSLVHDDLPAMDDDDLRRGQPTCHIAFDEATAILAGDALQALAFSTLADAPLSDFATNKR 138
Query: 135 LV----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ G+ L+ + E+ A+L + VS +
Sbjct: 139 GELLSVLARAAGYRGMCGGQAIDLTSTGEEISLEQLKRLHNLKTGALLRACVEMVSIVSQ 198
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ ++ + L +Y ++G+AFQ+ DD+LD G ++GK G D GK T P L
Sbjct: 199 DLDSNSKADLLAYADDIGLAFQVQDDILDVEGNSEQLGKPAGSDIALGKNTFPAKL---- 254
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + Q A +L LP +
Sbjct: 255 ----------------------------------GIEGAKRELDKLHQNALQALARLPYN 280
Query: 305 SWKKSLMEVVDFCLQRLN 322
SL+ + ++R +
Sbjct: 281 --TDSLIAFSELLVKRDH 296
>gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana]
Length = 299
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 109/289 (37%), Gaps = 8/289 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A+ + L G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLLELHRGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E + + + +S ++ LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTETEYKSMVLQKTGGLFGLAVGLMQL---FSSSKKDLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +V+ K
Sbjct: 188 DDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + + T ++A ++ L + L+ +++
Sbjct: 246 YCVHYLDKVGSFEYTRQTLRELEKEAYGQIKLLGGNPE---LVSIIEQL 291
>gi|325048848|dbj|BAJ79290.1| geranylgeranyl diphosphate synthase [Reticulitermes speratus]
Length = 323
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 102/293 (34%), Gaps = 8/293 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E I + + +++ GK++R A L+ + ++ + H +L DD+ D
Sbjct: 21 DEKILEPLTHILQVPGKQIRAKFARAFNYWLKVPENKLNVVKDIAQMFHYNAVLIDDIRD 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S+LRRG A ++G +++ ++LL EA+ + + G+
Sbjct: 81 NSSLRRGIPVAHSIYGVASTINAANYLLLTGLKKAQSLNHPEAMTVCTEQFLEMYWGDGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ N + + + + + + L + + FQ
Sbjct: 141 EIYWRDNYICPSLEEYKQLIKRKTRGYLMLEIALMQLFSDNKADLTKLTTIL---ALYFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + K ED GK + P+I A + + + VE
Sbjct: 198 IRDDYCNLFLPQYSKDKGFCEDLTEGKFSFPIIHAIRSHPDD--HQVIRILRQQTQDVEL 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
K ++ + +L T + +A+ L + L V+D +
Sbjct: 256 KKYCVTLLEKFGSLSYTRHTIEELDAEARAEAAKLGGNP---MLEAVLDELMN 305
>gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 372
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 131/324 (40%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 48 LRAAVERLAPPMNTVAAYHFGWIDAQGRPSEGDGGKAVRPALALLSAEAAGAAPEVGIPG 107
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A
Sbjct: 108 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFAVANEVLLESGTV 167
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 168 EAGRAARRLTTASRKLIDGQAQDISFEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 227
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 228 GADERTADTLEAYGYHLGLAFQAVDDLLGIWGDPVATGKQTWSDLRQRKKSLPVVAALAA 287
Query: 245 GTKREKNFWKSTINDGKISV------ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + D K S E ++ E T A A ++L
Sbjct: 288 GGPASERLGGLLAADAKSSDFDSFSEEEFATRAALIEEAGGREWTSQEARRQHAVAIEAL 347
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + L+ + DF + R
Sbjct: 348 DRVDMPERVRAQLVALADFVVVRK 371
>gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14]
gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/322 (20%), Positives = 114/322 (35%), Gaps = 55/322 (17%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N ++ + + + + ++Y GGKR RP LT T ML D+ A A+E
Sbjct: 19 NDVLANWLSTQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVE 78
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+HDD+ LRRG+ + + ++L GD L + AF ++ + +
Sbjct: 79 CIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDILANGQLSQDG 138
Query: 131 EALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + G+ L E+ L A++ A +
Sbjct: 139 NTQRIAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGA 198
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++ L Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 199 LAAGDKGVAILPQLDKYAEAIGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYP--- 255
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ L + +A Q+A +L
Sbjct: 256 -------------------------------ALL----GLDGAQEKAQLLYQEALQALAA 280
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+P + L + ++R N
Sbjct: 281 IPYN--TSQLEVFARYIIERNN 300
>gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
Length = 291
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 51/329 (15%)
Query: 5 EDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + S + + +++ + GGKR+RP+L AT + +
Sbjct: 3 SALFDHWIARTERSLEACLPSTALAPQRLHAAMRHAVLGGGKRMRPLLVYATGALFDADE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D+ A A+E IH +L+HDD+ LRRG+ + + T++L GD L ++AF
Sbjct: 63 DSLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 120 ------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + + S G + + D + KT L
Sbjct: 123 LLAAASVSADLRVGWLQSLASAAGAAGMCGGQALDIDATGQLQSLSDLERMHALKTGALI 182
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + +L G ++ +Q L ++ LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 183 RAAVRMGALTGGAAHADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSK 242
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T P ++ + + + +
Sbjct: 243 STYP----------------------------------ALL----GMEGAKAKLAELATR 264
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D L+ P ++L + F + R +
Sbjct: 265 MHDVLQ--PYGQPGETLATLGRFAVDRAH 291
>gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b]
Length = 298
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/319 (21%), Positives = 116/319 (36%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ + ++A A+E H
Sbjct: 18 EQLLNEIVIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHC 77
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ S A
Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVLMRLSPLLPAAQV 137
Query: 135 LVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEVSS--LI 183
+ + + + E+ L I A
Sbjct: 138 VAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLRGIHLLKTGKLILACFEMVLAAQ 197
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 198 HEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 258 QL--------------------------------------EEEIAVHYQTAMDSLRLFGS 279
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 280 KAA--ALIELTKQLQNRSN 296
>gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513]
gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
Length = 304
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+V + + + + + +++ + +GGKRLRP L L +A + G +
Sbjct: 18 EVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+A A+E IH +L+H +DD LRRG+ + ++L GD LL+ AF ++
Sbjct: 78 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
+++ + C L + + KT L
Sbjct: 138 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 198 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + + T + +A+
Sbjct: 258 LVSLH--------------------------------------GIDWTRQQLSGLVAQAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + L + F +R N
Sbjct: 280 SLLAPF--GEDAEPLKQAARFIAERQN 304
>gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
Length = 300
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/335 (19%), Positives = 114/335 (34%), Gaps = 55/335 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L ++ N + + + + + + +KY GGKR RP LT T ML
Sbjct: 6 TLSQSLKHYQDRSNQHLAQWLEAQPFADQALVKTMKYGTLLGGKRARPFLTYITGQMLGA 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E IH +L+HDD+ LRRG + + ++L GD L + A
Sbjct: 66 ECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAGDALQTLA 125
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + + A + A + G+ L ++
Sbjct: 126 FEILADGQLSDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKRVDLQKLEAIHKHK 185
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ A + +V L + +G+AFQ+ DD+LD + +GK G
Sbjct: 186 TGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTETLGKPQGS 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ L + +
Sbjct: 246 DLALDKSTYP----------------------------------ALL----GLEGAQQKT 267
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q+A +L +P + L + ++R N
Sbjct: 268 QQLYQEALQALDAIPYN--TTQLEVFARYIIERNN 300
>gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
Length = 295
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 122/317 (38%), Gaps = 49/317 (15%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E++ L + + E I +Y + GGKR+R +L L+ + + + ACA+E
Sbjct: 19 ERLEKLCDEYLPQKAE-IGQAARYSLLGGGKRIRAVLALSACELAGKPAELALDYACALE 77
Query: 73 FIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+H +L+HDD +D+ RRG+ + +G T++L D L++ AF ++ + +
Sbjct: 78 MLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADALVTAAFEVIAQAELSPES 137
Query: 131 EAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ TE+ L + KT L AA+E+ + A
Sbjct: 138 RCRAAAVLAKAGGARGMLYGQELDKKYEAQSATEQQLLELHAHKTGALILAAVELGCIAA 197
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ RQAL+ Y LG+ FQ+VDD+LD E+GK +G D N K T +
Sbjct: 198 DAAPATRQALQRYAAELGLVFQIVDDILDVTSTTEELGKPVGSDEENDKTTFVSLY---- 253
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
L + A + + A +LR L
Sbjct: 254 ----------------------------------GLEGARHLAQHHNESALAALREL--G 277
Query: 305 SWKKSLMEVVDFCLQRL 321
+ + LQR
Sbjct: 278 PAADFMERLATDLLQRK 294
>gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
Length = 295
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/320 (18%), Positives = 108/320 (33%), Gaps = 54/320 (16%)
Query: 15 VNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLAC 69
V + + + ++P+ ++Y + +GGKR+RP L L + L +
Sbjct: 14 VEQALCAMLDARASVVPERLLSAMRYSLMAGGKRVRPALLLESYLACGGKDHAAAMPAML 73
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCM 120
AIE IHT +L+HDD+ + + LL++A
Sbjct: 74 AIECIHTYSLIHDDLPCMDDDDLRRGKPTCHRRFDEATAVLAADALQALAFELLAEAELD 133
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
AL+ + G++ + + D+ + KT L E
Sbjct: 134 PELRLELIRKLALAAGCQGMVGGQMMDMQAEHDSDIDMLMVERIHLHKTGALLCWCCEAG 193
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG + +A YG +G+ FQ+ DD+LD +GK+ G+D K T +L
Sbjct: 194 AMLAGAGTAELEASSRYGKAVGLLFQVADDILDATASSAALGKSAGKDAAQNKATYVSVL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L++ A + A +
Sbjct: 254 --------------------------------------GLIEARALAAEMLELATSACSE 275
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L + L + + ++R
Sbjct: 276 LGEGG--NHLKTLAQYIMER 293
>gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
Length = 351
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 120/340 (35%), Gaps = 31/340 (9%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIF----------SGGKRLRPMLTLATALMLE-YRG 61
+V+ ++ + + + + + + + GKRLR
Sbjct: 13 SRVDDVLRAVVAREADELA-AIDPALEPVAGQLEAAVADGKRLRAAFCYWGWRAAGQPDS 71
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR------------------LVWGN 103
D V A ++E +H A ++HDD++DDS LR G+ A +
Sbjct: 72 DALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALRGAVHGRPRAVSAARSLAML 131
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+L+ A + A S++A L GE ++ + + T
Sbjct: 132 VGDLLMSLAGQMFATSGLPAAYLARARPLWSVLARELIAGECLEILRTGTVPDTATSLKV 191
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ L + +AG +R+ +YG+ LG AFQL DD+L G+ GK
Sbjct: 192 IRYKTAKYTVEQPLLIGGTLAGAGERLREGYSAYGLPLGEAFQLRDDLLGLFGDPEHTGK 251
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+D +PT + ++ + E+ + + + + L +MR +
Sbjct: 252 ANADDVSGHRPTALLSETWRLAGEGERQQLRVLLGRRDLDTDGLDTVRELMRRLKTPDRI 311
Query: 284 EYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
E + + A +L L + +L + R +
Sbjct: 312 ESMITARVESALGALHELDLPAHAVAALTALAHSAAIRRS 351
>gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 299
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 74/327 (22%), Positives = 118/327 (36%), Gaps = 48/327 (14%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L+D + V I + ++PD + Y + GGK LR L L A +
Sbjct: 13 DALKDALKHAAQIVETTIEAAVRPVETVVPDAMMYAV-RGGKALRGFLVLEGARLHGVEE 71
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A AIE +H +L+H +DD +RRGK W T+VL GD L + AF
Sbjct: 72 RIAAPIAGAIEAMHAYSLIHDDLPCMDDDDVRRGKPTVHRKWDAATAVLTGDALQALAFE 131
Query: 120 MVI----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+++ + +++ L + + Q + L I+S A A
Sbjct: 132 LIMSADIKPEAKVVLAHMLAIDAGERGMVGGQAADIAAETADAPLTLREIESLQAKKTGA 191
Query: 176 ALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+E + + ++ YG LG AFQ+ DD+LD G+ N +GK + +D GK
Sbjct: 192 LIEWACAAGPRIAGADEMPMRHYGQALGRAFQIADDILDVTGDANTVGKAVCKDDAAGKA 251
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T +L L + RA +A
Sbjct: 252 TFVSLL--------------------------------------GLDGAKRRAVELVDEA 273
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321
D+L +L F + R
Sbjct: 274 CDALDVYK--EAADTLKAAARFVVNRS 298
>gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
Length = 287
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 50/328 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ + E + + + + + + ++Y GGKR+R L + +A + +
Sbjct: 1 MQARLAAEAETIQTHLSRVLAPFGTGPVAEGMRYATQ-GGKRIRGFLVMESARLHDVPET 59
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A AIE +H +L+HDD+ +D+ LRRG+ + W T++LVGD L S AF +
Sbjct: 60 AAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHIKWDEATAILVGDALQSLAFEL 119
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFS 174
V A L + + L + LD+ E + + +
Sbjct: 120 VAHPDCGPAEVRAGLTLSLARAAGGQGMVLGQALDIAAETATSPLSLDEITTLQAGKTGA 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
L ++ A + ++ L +Y LG+AFQ+ DDV+D G+ GK +G+D GK
Sbjct: 180 LILWSATAGACMAHADMTPLSTYARALGLAFQIQDDVIDVTGDAAAAGKAVGKDAAAGKA 239
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T +L L RA S A
Sbjct: 240 TFVSLL--------------------------------------GLDGARARAASLVDAA 261
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D+L C + + L ++ F + R +
Sbjct: 262 CDALSCYGERGER--LRDLARFVISRQS 287
>gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
proteoclasticus B316]
gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
proteoclasticus B316]
Length = 313
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/349 (19%), Positives = 122/349 (34%), Gaps = 70/349 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML- 57
+ ++ + + + + + Y + +GGKRLRPM+ L +
Sbjct: 3 NDFNKRLADKAAHIEDILKAFLPKEEGYARTVIEAMNYSLLAGGKRLRPMMILEAYKLFA 62
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ A+E IHT +L+HDD+ +D+ RRG+ V+G + L GD L
Sbjct: 63 GNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMATLAGDGL 122
Query: 114 LSQAFCMVIETKSQEALEALSL----------------------VACTLAEGELRQLSLS 151
L+ A+ I + + + + +
Sbjct: 123 LNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADICAENATE 182
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
D ++ ++ ++KT L A+L + ++I G ++ G N+GIAFQ+ DD+
Sbjct: 183 IPEDEMKDTLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVGIAFQIQDDI 242
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
LD +GK IG D +NGK T +
Sbjct: 243 LDITSTSEVLGKPIGSDEKNGKSTYVSLY------------------------------- 271
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + ++A D L L L E+ ++ + R
Sbjct: 272 -------GMDNARDSVKKLSEEATDILDGL--GFENSFLHELFNYLIYR 311
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
Length = 296
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968]
gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150]
gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968]
gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150]
Length = 293
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/331 (20%), Positives = 125/331 (37%), Gaps = 55/331 (16%)
Query: 7 LTLKDMEKVNFLILKRI-CSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ K + + + + I S V +I + Y +F GGKR+RP+L T +L+ +
Sbjct: 1 MISKYINRHESYLKQVIADSSVPAVIIRSAIDYSLFPGGKRIRPILVYLTGSLLDVDLNI 60
Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+A A+E H +L+HDD+ +D+ LRRG+ + + T++L GD + + A ++
Sbjct: 61 LDAIAAAVELTHCYSLIHDDLPAMDNDDLRRGRPSCHKAFDEATAILAGDGMQALAIDVL 120
Query: 122 IETKSQEALEALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + G+ LS + +E + KT
Sbjct: 121 LTYLPHLVQPDRIISITRELVQATGISGMVSGQSLDLSELAKSSIDDERLKEIHHLKTGR 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A +E+ I + + AL++Y ++G+ FQ+ DD LDY +GK D N
Sbjct: 181 LILACIEMVLRIQSTPEAYQSALRTYANHIGLVFQMQDDYLDYHAPAEFLGKGRSSDLAN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T + E +
Sbjct: 241 KKTTFATLYTK--------------------------------------DKLEMEISRHY 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A D+L+ + L+++ +R N
Sbjct: 263 EIALDALQIFGQKAL--LLIKLTKELQERSN 291
>gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 296
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 53/320 (16%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
VN + + + D ++Y GGKRLRP LT+ A + + + CA+
Sbjct: 16 VNDEMAHLLPVPDGPERRVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCAL 75
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG+ + T++L GD L S+AF ++ +
Sbjct: 76 EMVHCYSLIHDDLPCMDDDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAESTHPD 135
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD--------VTEEDYLHVIKSKTAVLFSAALEVSS 181
+ LA + + + D + + KT L A E +
Sbjct: 136 PAVRCELVWQLAHAAGGMGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGA 195
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ +S+R ALK+Y +LG+AFQ+ DD+LD +G+ ++GK +G+D GK T +L
Sbjct: 196 ILGKAPSSLRLALKNYAHDLGLAFQIADDLLDVQGDEMQVGKKLGKDADAGKATFVSLL- 254
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ +A ++A L
Sbjct: 255 -------------------------------------GVEHARAQADMLAEQACRHLDPF 277
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
D L + + R
Sbjct: 278 GD--AAHLLRLTARYVVTRS 295
>gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
Length = 306
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + +V + + +D + D ++Y + GKRLRP+L LA A +
Sbjct: 16 DLSAWSAQALRRVEQALETWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAAAEAVSGHA 75
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AC++E IH +L+HDD +D+ LRRGK + +G ++L GD L + AF
Sbjct: 76 GAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGDALQALAFE 135
>gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
Length = 338
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/333 (19%), Positives = 126/333 (37%), Gaps = 37/333 (11%)
Query: 13 EKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRG 61
+KV I K I + +I +++Y GKR+RP+L L A E
Sbjct: 12 KKVEEYIEKVILENKVNPPKQIESLIRTLIEY-CLRPGKRIRPLLFLLGATSYAKKELDY 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF--------- 112
+ +A IE +H L+HDD++D SALRRG + +V+ + +
Sbjct: 71 EKLYRIAAVIEIMHCFLLIHDDIMDRSALRRGLPSLHVVFYEEFKEKNNNEKIGEDLALV 130
Query: 113 -----LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--KNLDVTEEDYLHVI 165
+ S + LE S G+ + S K ++ + +
Sbjct: 131 FGDILFFIAIRQLSKLNLSSKFLEEFSNCYINTGYGQTLDVLYSLGKYKPDEDKISVEIA 190
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KTA ++ +N ++ ++ + GIAFQ+ DD++ + GK+
Sbjct: 191 RLKTAYYTFFYPFYLGVLLSNENIDKKKIEDAIIPAGIAFQIRDDIISTF--DEKSGKSN 248
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D GK T + + + + S E ++ + ++ A+ +
Sbjct: 249 VTDILEGKLTALID------FGEYDEKFFEVYSKQEKSSEEIQYILDQILKSGAIKKAKN 302
Query: 286 RAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFC 317
Y+ +++ +R L + K L++++
Sbjct: 303 AMYTLFEESISKIRKLDLNDTSKDILIDLISRL 335
>gi|213027491|ref|ZP_03341938.1| hypothetical protein Salmonelentericaenterica_36003 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 113
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I G L+
Sbjct: 1 DDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAIEQGN-GRHLLE 59
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
M +L T RA KA +L+ LPD+ W+++L+ + +QR
Sbjct: 60 PVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQR 111
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 133/335 (39%), Gaps = 57/335 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L++ ++V + + + + + + + Y + +GGKRLRP+L AT
Sbjct: 6 NLKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKD 65
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACA+E IHT +L+H +DD LRRGK V+G T++L GD LL+ +F
Sbjct: 66 ESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSF 125
Query: 119 CMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E E + L + +T ++ ++ KT
Sbjct: 126 QLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKT 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L ++ +++A ++ L+ + ++G+AFQ+ DD+LD G ++GK IG D
Sbjct: 186 GKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDT 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
N K T P +L + + +
Sbjct: 246 ENEKTTYPSLL--------------------------------------GMEAAKEKLQY 267
Query: 290 YGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++A SL + L E+ + +R +
Sbjct: 268 HVEQALLSLRQAQIKHG----LLEEICLYIAKRDS 298
>gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
Length = 309
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/322 (22%), Positives = 125/322 (38%), Gaps = 51/322 (15%)
Query: 14 KVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLAC 69
+N + + I S + + Y + +GGKRLRP+LT+AT L + H
Sbjct: 18 ALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVM 77
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------V 121
A+E +HT +L+HDD+ LRRG+ + +G + L GD LL+ AF
Sbjct: 78 ALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLP 137
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
++ + + + S+++++ + K KT L A++
Sbjct: 138 ATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGL 197
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + A + G+AFQ+ DD+LD EMGK +D K T P
Sbjct: 198 ILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGK-- 255
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ N+AL+DT + +L+ L
Sbjct: 256 -----------------------------LGLIGANQALIDT-------IHSGQAALQGL 279
Query: 302 PDSSWKKSLMEVVDFC-LQRLN 322
P S+ + L + +R+N
Sbjct: 280 PTSTQRDDLAAFFSYFDTERVN 301
>gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName: Full=Albino-3 protein;
AltName: Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
Length = 433
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/282 (19%), Positives = 101/282 (35%), Gaps = 5/282 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK +R + A L+ ++ ++ I +HTA+LL DDV
Sbjct: 130 KEKVLTGPYDYLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDVE 189
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + K+ +A+ S L G+
Sbjct: 190 DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQG 249
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + S + + ++ +G+ F
Sbjct: 250 MDLFWRDTLTCPTEDDYLEMVSNKTGGL---FRLGIKLMQAESRSPVDCVPLVNIIGLIF 306
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + K + ED GK + PVI + + + G E
Sbjct: 307 QIADDYHNLWNREYTANKGMCEDLTEGKFSFPVIHSIRSNPSNMQLLNILKQKTG--DEE 364
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ A M + T +A+ + D K
Sbjct: 365 VKRYAVAYMESTGSFEYTRKVIKVLVDRARQMTEDIDDGRGK 406
>gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa]
gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa]
Length = 428
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/282 (19%), Positives = 101/282 (35%), Gaps = 5/282 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK +R + A L+ ++ ++ I +HTA+LL DDV
Sbjct: 125 KEKVLTGPYDYLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDVE 184
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + K+ +A+ S L G+
Sbjct: 185 DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQG 244
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + S + + ++ +G+ F
Sbjct: 245 MDLFWRDTLTCPTEDDYLEMVSNKTGGL---FRLGIKLMQAESRSPVDCVPLVNIIGLIF 301
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + K + ED GK + PVI + + + G E
Sbjct: 302 QIADDYHNLWNREYTANKGMCEDLTEGKFSFPVIHSIRSNPSNMQLLNILKQKTG--DEE 359
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ A M + T +A+ + D K
Sbjct: 360 VKRYAVAYMESTGSFEYTRKVIKVLVDRARQMTEDIDDGRGK 401
>gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 389
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 21/328 (6%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLI----------FSG-GKRLRPMLTLATALMLEYRG- 61
+V+ ++ + S + + +Y G GK +RP L LA A L
Sbjct: 64 EVDPVLRAALGSLPGPMRRIARYHFGWEHADGSPAEGGAGKAIRPALVLAAAAALGGSEA 123
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A A+E +H TLLHDDV+D A RR + A V+G++ ++L GD L + A +
Sbjct: 124 RAGAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDEGAILAGDTLQALALRL 183
Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + A A +L+A + E Q DVT ++ L + ++KT L +
Sbjct: 184 LAQDPHPAAPAAAALLADCVVELCAGQYADTALERRGPADVTLDEVLAMAEAKTGALLGS 243
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + L AG ++ AL ++G G+AFQL+DDV+ G+ GK +G D K +
Sbjct: 244 ACAIGGLYAGAGDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPVGADLAARKKS 303
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
LPV+ AF GT + E+L+ + + +A +A
Sbjct: 304 LPVVAAFASGTPASAELAELY--ARPSEKEDLEHIAQTVERAGGRDWAQGQAADRMARAM 361
Query: 296 DSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
L +PD L+ + +F +R +
Sbjct: 362 QQLARAVPDPEAAGGLLALAEFVTRRSS 389
>gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ;
Geranyltranstransferase (farnesyldiphosphate synthase) ;
Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 352
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GK +RP L L +A + +
Sbjct: 28 LRAAVDRLAPPMDTVAAYHFGWIDAQGNPTEGDSGKAVRPALALLSAEAAGVAPEVGIPG 87
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A + +
Sbjct: 88 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEILLELGTV 147
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 148 EAGRATRRLTTASRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 207
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 208 GADDRTADKLEEYGYHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAA 267
Query: 245 GTKREKNFWKSTINDGK------ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + + D K S E ++ E T A +A ++L
Sbjct: 268 GGEASERLGELLAADAKSNDFDTFSEEEFAARAALIEEAGGREWTSQEARRQHGRAIEAL 327
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + + L+ + DF + R
Sbjct: 328 DEVDMPARVRAQLVALADFVVVRK 351
>gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 293
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 133/335 (39%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ + K I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLTLFLAHYKKVLDESLYKEIKKRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+H +DD RRGK V+G+ T++L GD LL+
Sbjct: 61 KDPMIGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNHKVFGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF +V E ++ + G + ++N VT E+ + KT
Sbjct: 121 AFSIVAEDENLSFETRIALINQISYSSGAEGMVGGQQADIEAENKQVTLEELSSIHARKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + + L+ + N+G+ FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKKTGVDV 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FMNKSTYPGLLT--------------------------------------LDGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L L D + L+++ D R N
Sbjct: 263 HVSIAKSALSGHDLDD----EILLKLADLIALREN 293
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 52/321 (16%)
Query: 13 EKVNFLILKRIC-SDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E V + + +DV + + + Y + +GGKRLRP+L +A A + G + +AC
Sbjct: 10 ELVERALQAELDRTDVLDDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVAC 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LL+ AF +++ ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQNV 129
Query: 128 EALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A L +V + ++ ++ E+ V KT LF AAL
Sbjct: 130 SADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSG 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ G + AL +Y G+AFQ+ DD+LD G +GK +G D +N K T +
Sbjct: 190 AILGGASEAQLAALTTYAEQFGLAFQITDDILDVIGTAENIGKPVGSDEKNHKSTYVSLT 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+L + + A + A +LR
Sbjct: 250 --------------------------------------SLDEAQELAAQTVKDACTALRD 271
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
L E+V + + R
Sbjct: 272 F--GVEADFLRELVSYLVYRK 290
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 123/336 (36%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++N +L I + + ++Y GGKRLRP L AT M
Sbjct: 2 DFNQQLAAHQQRINQALLDYIAPLPFGNSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE +H +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 62 SLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 121
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L +E
Sbjct: 122 FSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELERIHRHK 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + V L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 182 TGALIRAAVRLGALAAGTPGREVLPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D ++GK T P ++ L + +A
Sbjct: 242 DQQHGKSTYP----------------------------------ALL----GLDCAKAKA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L + S+ + L + F ++R N
Sbjct: 264 MDLYQEAVSALNALSEQSYNIAPLQALACFIIERDN 299
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E +HT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062]
gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062]
Length = 301
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 71/338 (21%), Positives = 126/338 (37%), Gaps = 58/338 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV--------EMIPDVVKYLIFSGGKRLRPMLTLATA 54
L+ + + + + + + V E + + + Y SGGKRLRP+L + A
Sbjct: 4 ALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMVEAA 63
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ + + ++ A A+E IH +L H +DD LRRG+ + T++L GD
Sbjct: 64 RLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILAGDA 123
Query: 113 LLSQAFCMVIETKSQEALEALSLVACT--------LAEGELRQLSLSKNLDVTEEDYLHV 164
LL+ AF + + + ++ G S++ D TE + +
Sbjct: 124 LLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEIRQL 183
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT L A +++A + L +G +G+AFQL DD+LD G+ +GK
Sbjct: 184 QAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGDAEVVGKA 243
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
G+D GK T ++ E+ T
Sbjct: 244 TGKDAEAGKAT----------------------------------LVSLLGES----HTR 265
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A + L P + +L + + R +
Sbjct: 266 QELSRLISEADELLA--PYGAKANTLKTLARYIADRES 301
>gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus]
Length = 357
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/345 (19%), Positives = 126/345 (36%), Gaps = 39/345 (11%)
Query: 8 TLKDM-EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLATALM 56
D+ ++V + + ++ + D + L+ SGGKR+RP + L
Sbjct: 22 ITDDLLQRVEDKLASFLTAERDRYAAMDERALAAVDALTDLVTSGGKRVRPTFCITGYLA 81
Query: 57 LEYR--GDNHVLLACAIEFIHTATLLHDDVVDDSALR----------------RGKVAAR 98
V A +E +H + L+HDD++D+SA R G
Sbjct: 82 AGGDAGDPGIVAAAAGLEMLHVSALIHDDILDNSAQRRGKPTIHTLYGDLHDSHGWRGES 141
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+G +L+G+ L + ++ L + + G+ + +
Sbjct: 142 RRFGEGIGILIGNLALVYSQE-LVCQAPPAVLAEWHRLCSEVNIGQCLDVCAAAEFSADP 200
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
E V K+ V A + + A YG +G AFQL DD+LD G+
Sbjct: 201 ELSRLVALIKSGRYTIHRPLVMGANAASRPDLAAAYVEYGEAVGEAFQLRDDLLDAFGDS 260
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
E GK G DF K TL + A + ++ + + + E +++ + +
Sbjct: 261 TETGKPTGLDFTQHKMTLLLGWAM-----QRDTHIRTLMTEPGHTPEEVRR---RLEDTE 312
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
D E ++ + ++ P D W++ L ++ R N
Sbjct: 313 VPKDVERHIADLVEQGRAAIADAPIDPQWRQELADMAVRAAYRTN 357
>gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
Length = 283
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+N + +++ + + + Y + +GGKRLRP+L L+ M + + A A+E
Sbjct: 11 AINHALDEQLATVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDGVVAEALPAATALE 70
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
F+HT +L+HDD+ +D+ LRRG+ +G ++L GD LL+ AF ++ + ++
Sbjct: 71 FVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPEKGA 130
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY----LHVIKSKTAVLFSAALEVSSLIAGV 186
+ ++A + + + + ++KT L A + + SL +
Sbjct: 131 ALVQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAI 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P + +
Sbjct: 191 PEADQVALADFAAAFGLGFQIKDDINDVTKTTAELGKTADKDVAEHKNTFPELLGLAGAK 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + + +N + +LK +++
Sbjct: 251 QALATQFQQATAALNSLTVDAADLKSILAVLQA 283
>gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463]
Length = 289
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/297 (22%), Positives = 120/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + S+V+ I ++ Y + +GGKRLRP+L LAT L + D + + C I
Sbjct: 15 IDDYLAKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIVCGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQSAQ 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L + G ++Q+ DD++D E GK +D GK +L
Sbjct: 195 KASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEEAGKATHKDKEEGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + +AKD L+ L
Sbjct: 251 ----------------------------------GIDQSRKKLKELIDQAKDDLQGL 273
>gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
campestris pv. campestris str. 8004]
gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
campestris pv. campestris str. 8004]
Length = 291
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/328 (20%), Positives = 119/328 (36%), Gaps = 51/328 (15%)
Query: 6 DLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L + + + + + S + + +++ + GGKR+RP+L A+ +
Sbjct: 4 ALFERWVARTERQLDACLPSPALAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEG 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E IH +L+HDD+ LRRG + + T++L GD L ++AF +
Sbjct: 64 SLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILAGDALQARAFEL 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFS 174
+ E + AL L + A G + KT L
Sbjct: 124 LAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQRMHALKTGALIR 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA+ + L G + +Q L ++ LG+AFQ+ DD+LD ++GK G+D K
Sbjct: 184 AAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKS 243
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P ++ + + +
Sbjct: 244 TYP----------------------------------ALL----GMDGAKTKLAELASHM 265
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L LP +L + F + R +
Sbjct: 266 HALL--LPYGESGATLASLGRFAVDRAH 291
>gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M ++ K +N + ++ SD +++ Y + +GGKRLRP+L LAT L
Sbjct: 10 MTTFKEFQAKYTPIINDFLEGQLAKESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDALG 69
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ V AC IE IHT +L+HDD+ +D+ RRG++ + WG ++L GD L
Sbjct: 70 VEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQP 129
Query: 116 QAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + L + + G+ + + N D +EE H+ KT L
Sbjct: 130 LGIQWIAQAEHNWKLIEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCL 189
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ +A + Q ++ + G ++QL DD++D E GK +D G
Sbjct: 190 ILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVG 249
Query: 233 KPTLPVI 239
K +
Sbjct: 250 KNNSLTM 256
>gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae]
gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae]
Length = 338
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/306 (18%), Positives = 121/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L +
Sbjct: 1 MEELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+S ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T + +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCISLLEKLGSFQYTRKVLETLDAEARAEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 121/324 (37%), Gaps = 54/324 (16%)
Query: 13 EKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN + ++ + + ++Y GGKRLRP L AT ML A
Sbjct: 12 QRVNAALQGFISQLPFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IH +L+HDD+ LRRG+ + +G + ++L GD L + AF ++ +
Sbjct: 72 AIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ L+ E A++ SA
Sbjct: 132 GVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL + +G+AFQ+ DD+LD G +GK G D + GK T P
Sbjct: 192 LGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTGATEVLGKQQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A+ Q++ ++
Sbjct: 252 ALM--------------------------------------GLDNARIKAWELCQESLNA 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + F ++R
Sbjct: 274 LDTLAAQSYNTSALRALASFVIER 297
>gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 15 VNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + + + S E + + ++Y +++GGKR+RP+L + A + + + A AI
Sbjct: 12 IDTKMREILLSKEEIAKPLREAMEYSLYAGGKRVRPVLLMEAARAVGGDPGSVLDYAAAI 71
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
EFIHT +L+HDD+ DD RRGK V+G ++L GD L + A+ +++ ++
Sbjct: 72 EFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAYEVMLSCIAKSD 131
Query: 130 LE-------------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ S + + + + KT L +AA
Sbjct: 132 NMGDEILKKIKAANEIVMAAGTEAMVSGQVMDINSCSDKDSLTMLEKMHRMKTGALITAA 191
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ V +++AG A + YG N+G+AFQ+VDD LD G+ MGK+I D RN K T
Sbjct: 192 VVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGDSKNMGKDINADERNEKITY 251
>gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
Length = 379
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 119/320 (37%), Gaps = 27/320 (8%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALML------------EYRGDNHVLLACAIEFI 74
+ + + + GK +RP L + A + E D V LACA+E
Sbjct: 61 DAFLYEPLAQFVQGKGKFIRPALCMLGAHIAAGERAAGEAVQTEVLPDALVRLACALELF 120
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--------TKS 126
A L+HDD+ D+S +RRG G ++ +GD L A ++ +
Sbjct: 121 QAAALIHDDIADESLVRRGNPCLYRTHGTGLAINMGDCALVDASKLICTLSAEGLPSNAA 180
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
+ L+ + T EG+ L S+ +++ ++ + L
Sbjct: 181 LQLLDEFLTMERTTIEGQALDLGWSRARTWNLAPSDYLVMAELKTAHYSLASPLVLGALF 240
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G G+AFQL DD L+ G GK++ D GK T + A +
Sbjct: 241 AQAPKALCDALREFGCAAGVAFQLRDDYLNLFGN-KAQGKDMCSDIIEGKRTYLTLYALE 299
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--L 301
++ + + L +A ++ + A + + +A +L L
Sbjct: 300 HLPSELQHELIDILAAKTNTARELARACELIEKAGAPEASLAKERELVGQALHTLDKAQL 359
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+ L ++ + R
Sbjct: 360 APKHI-QLLADLCHYVTHRS 378
>gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase
[Bifidobacterium gallicum DSM 20093]
gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase
[Bifidobacterium gallicum DSM 20093]
Length = 385
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/376 (20%), Positives = 135/376 (35%), Gaps = 65/376 (17%)
Query: 7 LTLKDMEKVNFLILKRICSD-------------------------VEMIPDVVKYLIFS- 40
+ D+ + I + + S M+ V + + S
Sbjct: 5 IIESDLALIEQRIGELVRSHMDVQLNSYANDTNPTACANVIASSLEPMLNAVARQAVISS 64
Query: 41 -GGKRLRPMLTLATALMLEY----------------RGDNHVLLACAIEFIHTATLLHDD 83
GGKRLR +L L T ++E + + LACAIE TA L+HDD
Sbjct: 65 EGGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQSVLDLACAIELFQTAALVHDD 124
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGD--------FLLSQAFCMVIETKSQEALEALSL 135
++DD+ LRRGK AA N L LL+ A +V S + ++
Sbjct: 125 IIDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLATACSVVASEASHALPDPNAI 184
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLH------------VIKSKTAVLFSAALEVSSLI 183
+ + ++ +L + K+ + + L
Sbjct: 185 ERAFMRMQQEVEIGQVLDLAIERMSLDDAQALADASLNVFRWKTASYTTITPLLLAMLAA 244
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
++ + G+ LGIAFQ+ DD++D G + GK IG D R GK T+ + A
Sbjct: 245 GMPEDEALRHAIDIGLPLGIAFQIADDLIDVTGSTSNTGKPIGGDIREGKRTVLLADALD 304
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP- 302
E+ + +++ + A+ +E R + + ++ L
Sbjct: 305 LAGTPEREQLTQYFEAAQRDADDVNDIIGMFHATGAITASERRINELWAQCQQAITALAL 364
Query: 303 DSSWKKSLMEV-VDFC 317
D+ ++ LM++ F
Sbjct: 365 DTPVQRRLMDMCARFI 380
>gi|330901422|gb|EGH32841.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 56
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
+ D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L
Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCG 56
>gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 13/294 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLAC 69
E V + + S +I + YL + GK +R L A M + V+ A
Sbjct: 12 FEMVKQETKRILHSGPSLISNYTGYLSDATGKMMRAS-ALLAASMNEEGMVPYDAVIFAS 70
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQ 127
A+E +H ATL+HDD++DD+ RRG + + G +T+V+ GD+LL+ A + T +
Sbjct: 71 AVEILHLATLVHDDIMDDADTRRGLITLQKKAGKRTAVICGDYLLAAAINELSKVVTDEK 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
S ++A GELRQ ++N + YL +I KTA LF AA +L
Sbjct: 131 YKKFNFSRYVESIALGELRQNINNRNFRLKTFRYLSIIDGKTAALFEAAYHAGALAGDAD 190
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + G GI FQL DD +D+ K + DF+NG TLP+I F +
Sbjct: 191 EQQIKLFRKLGRYTGIIFQLTDDCIDFENTKETALKPVMSDFQNGVVTLPLIHTFSKNPS 250
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
I + + + ++ + + + + T A Y +KA + L
Sbjct: 251 --------LIEKAEKNQLSTEEMYQQVMKAGGVEFTHQLAKDYYEKATRTANSL 296
>gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Fulvimarina pelagi HTCC2506]
gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Fulvimarina pelagi HTCC2506]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/334 (22%), Positives = 133/334 (39%), Gaps = 56/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-------EMIPDVVKYLIFSGGKRLRPMLTLATAL 55
M E + E V + + + E + +++ GGKRLRP L + +A
Sbjct: 1 MFEQSLAQTAELVEGRLSEILSGHDRVARGAPERLLAAMRHGTLGGGKRLRPFLLIESAR 60
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ + D + +ACA+E IH +L+H +DD LRRG+ + + T++L GD L
Sbjct: 61 IFGIQDDAVLDIACALEAIHCYSLVHDDLPAMDDDDLRRGRPTVHKAYDDATAILAGDSL 120
Query: 114 LSQAF-------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
L+ AF + E + + A + G ++ ++E++ +
Sbjct: 121 LTLAFGLVAGASKIPPEARVRIAALLSADAGAGGMAGGQALDLAAEQSALSEDEIARMQA 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L + A E ++ A + ++ L+ +G +G+AFQL DD+LD + ++GK G
Sbjct: 181 MKTGALIAFACEGGAIAAAASSEDQRRLRRFGEIIGLAFQLADDLLDETADAAQLGKAAG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+D GK TLP + + T R
Sbjct: 241 KDRARGKKTLP--------------------------------------ALKGIEWTRNR 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ +A+ L D + L+E F R
Sbjct: 263 LAALVAEAESELAPFGDKA--TVLLEAARFIASR 294
>gi|322695231|gb|EFY87043.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
Length = 325
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/295 (19%), Positives = 114/295 (38%), Gaps = 9/295 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDV 84
+ +++ + YL S GK +R LT A L + + + + DD+
Sbjct: 34 EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVSIKRHPSFATMCLTSFSIDDI 93
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ + A + + + A + L G+
Sbjct: 94 QDSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRGQ 153
Query: 145 LRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+L + TE++Y+ +I++KT LF A+ + ++S ++ LG
Sbjct: 154 GMELHWRDSLHCPTEDEYMRMIQNKTGGLFRLAIRL----MQGESSSKRDYLPLVETLGT 209
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD + + +V K ED GK + P+I + + + +
Sbjct: 210 LFQIRDDYQNLQSDVYSKNKGYCEDISEGKFSYPIIHSIRSRPGDLRLLN--ILKQRSED 267
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFC 317
+ A + + + + S Q+AK L L D + + + + ++
Sbjct: 268 PMVKQYAVEYIESTGSFTYSRQKIESLLQQAKAQLTDLEDGTNRGEKMRAILKML 322
>gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 367
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 82/324 (25%), Positives = 135/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + V
Sbjct: 43 LRAAVGRLAPPMDTVAAYHFGWIDAEGQPSDGDGGKAVRPALALLSAEAAGAPAEAGVPG 102
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A+ +
Sbjct: 103 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAYDLLLELGTV 162
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 163 EAGRAARRLTTATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 222
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 223 GADDRTADTLEAYGYHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAA 282
Query: 245 GTKREKNFWKSTINDGK------ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D K S E ++ E T A A ++L
Sbjct: 283 GGEASDRLGELLAADAKSNDFDSFSEEEFAARAALIEEAGGREWTAQEARRQHAIAIEAL 342
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ ++ L E+ DF + R
Sbjct: 343 HAVDMPHRVREQLTELADFVVVRK 366
>gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
Length = 332
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 13/323 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-------EMIPDVVKYL-IFSGGKRLRPMLTLATA 54
L + V + + + + + ++L + SG KR RPML
Sbjct: 2 DLARELTDFLGAVEQRLGSTLVDGDAGPDVKGDTLMEAARHLCLGSGSKRARPMLARLFG 61
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + V +A A E IH+A+LLHDDVVD RRG+ WGN +V+ GD +L
Sbjct: 62 GAVGVPAERLVDVAVAAELIHSASLLHDDVVDAGMFRRGRPTVNARWGNIVAVMSGDLIL 121
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S + + ++ ALS+V+ ++ + L I
Sbjct: 122 STGLFQLSQLDARLTRSALSVVSEMTRAAIA--EVEARGDLDLPLNRLRFIAEGKTGSLF 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ + +G +LG+AFQ+ DD+ D G GK D + P
Sbjct: 180 GWCGNAAATLAEHPEAVERFDGFGRHLGVAFQIADDIRDILGTDV--GKPRYADVHSRTP 237
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
++P++LA + + + K I+ + K+ + A+ + R + A
Sbjct: 238 SMPILLAVAK-DESLRRKLKDAWAFSAITPDRTKEIGAAIEATGAVDASMARMNVEIEAA 296
Query: 295 KDSLRCLPDSSWKKSLMEVVDFC 317
D L L+
Sbjct: 297 LDKLGHFAKEPAGAELVSWARKL 319
>gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)]
Length = 386
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 19/334 (5%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATAL 55
L + V+ + I + E + V Y +G GK +RP L L A
Sbjct: 52 LLSESRASVDPELRSAIATLPESMRRVALYHFGWQHADGTPAAGNAGKAIRPALVLTAAA 111
Query: 56 MLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
L G + A E +H TLLHDDV+D A RR + A V+G+ ++L GD L
Sbjct: 112 ALGGPGARAAAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDAL 171
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-----HVIKSK 168
+ A + + A + +A + E Q + + ++ + ++K
Sbjct: 172 QALALRLFAADPHPASAAAATRLADCVMELCEGQHADTAMERPPPDEVTLDETLVMAEAK 231
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A V +L AG +AL ++G G+AFQL+DDV+ G+ + D
Sbjct: 232 TGALLGCACAVGALYAGAATEDVEALDAFGREPGMAFQLIDDVIGIWGDPAPHRQAGRCD 291
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K +LPV+ A GT + + E+L++ + + + +A
Sbjct: 292 LAARKKSLPVVAALTSGTPAAAELAELYTGPYDENKEDLERTALAVERAGGRDWAQAQAA 351
Query: 289 SYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRL 321
+A L +P+ L+ + +F +R
Sbjct: 352 DRMARAMQELARAVPEPEAAGGLLALAEFVTRRS 385
>gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
Length = 293
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 142/331 (42%), Gaps = 52/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M L + ++ V + + ++Y + +GGKR+RP+L T +L
Sbjct: 6 MNELINQINSALDGVIE-----TSPLNTNLEESMQYSLNAGGKRIRPLLVFLTLDVLNQD 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++AF
Sbjct: 61 YKKGKKTALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAV 171
++ + + E+ + +++ + S++ V + + K+KT
Sbjct: 121 EIIADDELLESDVKVKILSRLAHNSGHLGMVGGQTLDMQSEDKPVDLDTLEQIHKAKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++ IA V S QAL+ + ++G+ FQ+ DD+LD G+ +++GK +G D N
Sbjct: 181 LLQFAVLSAADIAKVDKSTSQALEDFSNHMGLMFQIKDDLLDVYGDESKLGKKVGSDIEN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T ++ ++ A E + +
Sbjct: 241 HKSTY----------------------------------VSLLGKDGA----EDKLNFHK 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A S+ L K L+++V+ R +
Sbjct: 263 DAAIKSIEQLSSHYDIKPLLDIVELFYTRDH 293
>gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/336 (20%), Positives = 119/336 (35%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++N +L I + + ++Y GGKRLRP L AT M
Sbjct: 9 DFNQQLAAHQQRINQALLDYIAPLPFGSSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD-----------SALRRGKVAARLVWGNQTSVL 108
+ A AIE +H +L+HDD+ ++ G+ A L ++
Sbjct: 69 SLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + + E G ++ +T ++ + + K
Sbjct: 129 FSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELERIHRHK 188
Query: 169 TAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
T L AA+ + +L AG L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGASGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D ++GK T P ++ L + +A
Sbjct: 249 DQQHGKSTYPALM--------------------------------------GLDCAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQRLN 322
Q+A +L L S+ + L + F ++R N
Sbjct: 271 IDLYQEAVSALNALSAQSYNTAPLQALACFIIERDN 306
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/329 (23%), Positives = 135/329 (41%), Gaps = 53/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ML+ K + N + S +++ D +KY I GGKR+RP+L L+T + +
Sbjct: 1 MNMLKIEINKWL---NDYFENK-GSYNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNN 56
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL++A
Sbjct: 57 YKDIMPMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAM 116
Query: 119 CMVIETKSQEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ AL G +S+ +++ + ++ K+KT
Sbjct: 117 NIMFNYSLTHDKLALMASKVISEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQ 176
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +++ +++ G + L +G LG+AFQ+ DD+LD G+ +GK + +D N
Sbjct: 177 LIKSSIIAGAILGGASKEEIEILDEFGSKLGLAFQIKDDILDVIGDSKILGKEVHKDDEN 236
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T L +
Sbjct: 237 NKTTFISHF--------------------------------------GLKKCKELCVELT 258
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ L + S K L ++ F ++R
Sbjct: 259 EQCIKLLSYI--SKDTKQLKDIALFLMKR 285
>gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 367
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 43 LRAAVDRLAPPMDTVAAYHFGWIDAEGRPSAGDGGKAVRPALALLSAEAAGAPAEAGIPG 102
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A+ +
Sbjct: 103 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAYDLLLELGTV 162
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 163 EAGRAARRLTTATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 222
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 223 GADDRTADTLEAYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 282
Query: 245 GTKREKNFWKSTINDGK------ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + + D K S E ++ E T A A ++L
Sbjct: 283 GGEASERLGELLAADAKSNDFDSFSEEEFAARAALIEEAGGREWTAREARRQHAIAIEAL 342
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ ++ L E+ DF + R
Sbjct: 343 HAVDMPHRVREQLTELADFVVVRK 366
>gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
Length = 271
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/304 (20%), Positives = 111/304 (36%), Gaps = 52/304 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + + +KY + +GGKR+RP+L + + D +A A+EFIH +L+HDD+
Sbjct: 8 PEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHDDLPA 67
Query: 87 DSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+ S +++++ K++ +
Sbjct: 68 MDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKTDDTAKAKIIAKLSEYAG 127
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
G S++ V+ + ++ +KT L +AA+E+ + ++ S R+ L Y
Sbjct: 128 FYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKREKLVGY 187
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+G AFQ+ DD+LD G+ E GK D + K T P +
Sbjct: 188 SELIGTAFQIKDDILDIEGKFEETGK-QASDEKLEKTTYPSLF----------------- 229
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDF 316
L ++ KAK L ++ L+E+ D+
Sbjct: 230 ---------------------GLEKSKELLNECISKAKKILEENFENN---GLLIELTDY 265
Query: 317 CLQR 320
R
Sbjct: 266 FGNR 269
>gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 356
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 32 LRAAVDRLAPPMDTVAAYHFGWIDAEGRPSAGDGGKAVRPALALLSAEAAGAPAEAGIPG 91
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A+ +
Sbjct: 92 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAYDLLLELGTV 151
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 152 EAGRAARRLTTATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 211
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 212 GADDRTADTLEAYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 271
Query: 245 GTKREKNFWKSTINDGK------ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + + D K S E ++ E T A A ++L
Sbjct: 272 GGEASERLGELLAADAKSNDFDSFSEEEFAARAALIEEAGGREWTAREARRQHAIAIEAL 331
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ ++ L E+ DF + R
Sbjct: 332 HAVDMPHRVREQLTELADFVVVRK 355
>gi|307211217|gb|EFN87417.1| Geranylgeranyl pyrophosphate synthetase [Harpegnathos saltator]
Length = 324
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 109/294 (37%), Gaps = 8/294 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ + + + Y++ + GK R L A L D + + +HT++++ DD+
Sbjct: 23 EDRKLLEPMSYMLRTPGKAYRTTLAKAVNYWLRIPNDKLEDIIEIVNILHTSSIILDDIE 82
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D++ LRRG A V+G + ++ + A + + +A++ + L G+
Sbjct: 83 DNAVLRRGIPVAHSVYGIAHTTNAANYGMIIALERTLALQHPDAVKVFTEQLLELHRGQG 142
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ N E + + ++ + + + + LG F
Sbjct: 143 SDIYWRDNHICPTELEYKITVVRKTGGL---FKLLVRLMQLFTKFEENVAPLADMLGYLF 199
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + + K ED GK + P++ A Q + + + +E
Sbjct: 200 QIRDDYCNLYDKQYSDMKGYCEDLTEGKFSFPIVHAVQSHPED--MQILNLLKQRPEEIE 257
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
++ ++ + T + + + + L + L+E++D ++
Sbjct: 258 VKRRFVDLLENFGSFNYTRKKIKELDAEVRKDINRLGGNP---LLIELLDKLIE 308
>gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 287
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/330 (20%), Positives = 124/330 (37%), Gaps = 55/330 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + L ++ N I + + + D ++Y + GGKRLR L + +A +
Sbjct: 5 LAEIRPLVEAEL---NAAI-DALPAGD--LSDAMRYAVQ-GGKRLRAFLVMESARLHGLD 57
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +A A+E +H +L+H +DD LRRG+ + W T++L GD L + AF
Sbjct: 58 DDASLPVAAAVEALHAYSLVHDDLPAMDDDDLRRGQPTVHVKWTEATAILAGDALQTLAF 117
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVL 172
++ + + + + LV + + LD+ D +I+ +
Sbjct: 118 QLLADPRVGDDAARMRLVGSLAQASGAAGMVWGQALDIAAETSGVPLDLDAIIRLQGGKT 177
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ ++ + + AL Y +G+AFQ+ DD+LD G GK +G+D
Sbjct: 178 GALIRFAATAGPLMAGADPAALDDYAQAVGLAFQIADDILDVEGCEAATGKRVGKDADAN 237
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T +L L A
Sbjct: 238 KATFVSLL--------------------------------------GLEGARSEARRLAD 259
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+D+L D +L ++ F ++R +
Sbjct: 260 AGQDALAGYGD--AAGNLRDLARFVIERDS 287
>gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
35580]
gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
35580]
Length = 334
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 102/265 (38%), Gaps = 7/265 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ ++ L+ GGKR RP+L + + G+ L IE IHTA+L+HDD+ D
Sbjct: 34 IALLSAPCASLVAGGGKRWRPLLAVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIED 93
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG+ AA + +G +++ G +L QA + ++ ++ A L
Sbjct: 94 NSELRRGQPAAHVAYGLDSALNSGSWLYFQALGSLEAYRAPANVKLDLYAAALTHIRALH 153
Query: 147 QLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ +DY +I+ KT L + A AG + A S
Sbjct: 154 EGQALDIHWHRTAGFFPSRKDYERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFE 213
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
G+ FQ++DD + + + + + +
Sbjct: 214 AAGVGFQILDDAKNISAGNAGKKRGDDIVEGKKSLPVILHIEKHPEDAAALTAYFEQAQR 273
Query: 260 GKISVENLKKAFIIMRENRALVDTE 284
I ++KA ++ + ++ D E
Sbjct: 274 EGIESPAVEKAIALLSASGSIADAE 298
>gi|83772569|dbj|BAE62697.1| unnamed protein product [Aspergillus oryzae]
Length = 310
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 104/287 (36%), Gaps = 7/287 (2%)
Query: 12 MEKVNFLILKR-IC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
M+ + + R + + +++ + YL + GK +R L A LE D ++
Sbjct: 1 MQALEAWLRDRGLQEAFEKILTGPLDYLRENPGKDIRAKLIDAFNEFLEVPNDKLDVIKR 60
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
I+ +H A+LL DD+ + S LRRG A ++G ++ ++ A + +
Sbjct: 61 IIDLLHNASLLIDDIQNSSTLRRGVPVAHSIFGVAQTINSANYAYFIAQRELT---NLTN 117
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ S+ L Q D + ++ + +++
Sbjct: 118 PLSFSIYTEELIHLHRGQGMELHWRDTMQCPSEVEYIEMALDKTGGLFRLAIRLMQAESA 177
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
LG+ FQ+ DD + + + K ED GK + P+I + +
Sbjct: 178 SGTDYVPLVETLGLLFQIRDDYQNLQSDTYSTNKGFCEDIGEGKFSYPIIHSIRSRPGDL 237
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ I+V K A + + E + S Q+A++
Sbjct: 238 RLLSILKQRSEDITVR--KYAVEYIDSTGSFDYCERKIISLMQQARE 282
>gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740]
gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes]
Length = 300
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 146/312 (46%), Gaps = 20/312 (6%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E++ + + + S + + + L S GK LR L LA A + + L
Sbjct: 4 LERIEARVKEWLLEVGSKEAL--QMSQSL--SSGKMLRSKLILAIA----GESEESLSLC 55
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
A+E I +A+LLHDDV+DD+ RRGK + +GN+ ++++GD S+AF + S
Sbjct: 56 AAVELIQSASLLHDDVIDDAFTRRGKPSINAAFGNKNAIMLGDIFYSKAF-FELTRFSPL 114
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+S L+ GEL ++L++ ++ E Y+ +I+ KTA + A + +
Sbjct: 115 IARTVSHAVVRLSLGELADVTLAQTFNLEEHLYMQMIEDKTAS---LIEAAAQAAALLVS 171
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+A + YG NLG+AFQ++DD+LD + +GK DF GK TLP I +
Sbjct: 172 RDSEAFRIYGKNLGLAFQIIDDLLDITQDSTTLGKPALNDFCEGKSTLPYIYLHR-ALDS 230
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
++ E M E+ A+ + A S G +A + +R S +
Sbjct: 231 ADKARLEASFARTLAPEEAAWIKEKMHEHGAIAQSYALARSLGLEAIEQIR----SQKCE 286
Query: 309 SLMEVVDFCLQR 320
L ++ ++R
Sbjct: 287 KLEVIMREMIER 298
>gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
Length = 350
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/321 (20%), Positives = 112/321 (34%), Gaps = 19/321 (5%)
Query: 18 LILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+ + S D + ++ GGK LRP + +A AL+ A A+E +H
Sbjct: 30 HLDHYLRSGNDAPYLDALLAEYPKRGGKMLRPGICIANALIFGGELTQAARCAAAVELLH 89
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE 131
A L+HDDV D+S LRRG G ++ GD LL AF + + A
Sbjct: 90 NALLIHDDVQDESDLRRGLPTLHAQHGVALAINAGDALLFTAFQPLLDAIRPLGADLAQR 149
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA------VLFSAALEVSSLIAG 185
+ + + Q D + + A + ++ L+ G
Sbjct: 150 VIEVTIAMARQTAEGQALELGWRDRNVTELTEADYLRMALKKTAWMGMIWPAQLGVLMGG 209
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ +G LG+AFQ+ DD+ + + GK D GK TL +I
Sbjct: 210 RGRIDPARVVRFGHFLGLAFQIEDDLRNLT-DNPGYGKERNGDLYEGKRTLMLIHVRNAC 268
Query: 246 TKREKNFWKSTINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKA----KDSLR 299
++ ++ + +M E ++ A + A K +
Sbjct: 269 EDADRARIDRLMDQPRADRDPAEIDWLARLMNERGSIRHARQVADAMAGVAMLEFKTAYS 328
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L DS+ L + + R
Sbjct: 329 GLSDSAELAFLEVLPSWVFDR 349
>gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus]
gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus]
gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus]
gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus]
Length = 300
Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/289 (17%), Positives = 106/289 (36%), Gaps = 8/289 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + + T + KA + + SL+ +V
Sbjct: 246 YCVQYLEDVGSFAYTRHTLRELEAKAYKQIEACGGNP---SLVALVKHL 291
>gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126]
Length = 296
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/316 (20%), Positives = 119/316 (37%), Gaps = 52/316 (16%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
++ + + D +++ + +GGKR+RP+L L+ + + ++ AIE +H +
Sbjct: 21 LIDELPDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVPKKDQMAISMAIECVHAYS 80
Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+H +DD LRRG + + T++L GD L + AF ++ + E
Sbjct: 81 LVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAFTVLADAPLSTYAETKRSQ 140
Query: 137 ----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ G+ L+ + EE A+L + V+ + G+
Sbjct: 141 LLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKTGALLKACVEMVAIVSEGL 200
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L +Y ++G+AFQ+ DD+LD G ++GK G D GK T P L
Sbjct: 201 LPQTKIDLMAYAADIGLAFQVQDDILDVEGSSEKLGKPAGSDEALGKNTFPAKL------ 254
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + A +L LP +
Sbjct: 255 --------------------------------GITGAKQELEMLHDNALQALARLPYN-- 280
Query: 307 KKSLMEVVDFCLQRLN 322
SL+ + ++R +
Sbjct: 281 TDSLIAFSELLVKRDH 296
>gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Callithrix jacchus]
gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Callithrix jacchus]
Length = 300
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTCQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALIK 289
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 52/331 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++L V + + + + + Y + +GGKRLRP+L +A A +
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGGKRLRPILLMAAADAVGA 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G + ACA+E IHT +L+HDD+ +D+ RRGK+ + T++L GD LL+ A
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTLA 123
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTA 170
F +++ + A L +V + + ++ E+ V KT
Sbjct: 124 FTVILRQQDVPAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEELQRVHMGKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF AAL +++AG AL +Y + G+AFQ+ DD+LD G ++GK +G D +
Sbjct: 184 ALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVGTAEDIGKPVGSDEK 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T + +L + + A
Sbjct: 244 NHKSTYVTLT--------------------------------------SLDEAQSLARQT 265
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A D+L D + L E+V + ++R
Sbjct: 266 VESAVDALHIFGDEAA--FLRELVLYLVRRK 294
>gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
Length = 304
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 57/329 (17%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L L ++N I + + + +++ + +GGKRLRP L + TA +L D
Sbjct: 23 LSRLLAD--ARLNDEI-----ARPARLLEAMRHGVLNGGKRLRPFLVMETAALLGGNADA 75
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A+E +H +L+H +DD LRRG+ + + T++L GD LL+ AF ++
Sbjct: 76 ALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGDSLLTYAFDII 135
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLS--------KNLDVTEEDYLHVIKSKTAVLF 173
++ + + L+ + + E+ + KT L
Sbjct: 136 AAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITTLQAMKTGALI 195
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A E +++AG RQ L+S+G +G+AFQL DD+LD + MGK G+D GK
Sbjct: 196 RFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTADAATMGKATGKDAARGK 255
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TL + E +
Sbjct: 256 GTLVALH--------------------------------------GREWAETTLARLVSE 277
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A L D + L+E F R N
Sbjct: 278 AAGLLSGYGDKA--DVLVETARFVANRKN 304
>gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin]
gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin]
Length = 742
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 122/310 (39%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
E + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142
S +RRG + +G T++ G + K+ + V
Sbjct: 493 SVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPPEKASRIYQLYFDVLLAGHA 552
Query: 143 GELRQLSLSKNLDVTEEDYLH----------VIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G+ + L + + KT A ++ ++ + +
Sbjct: 553 GQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P +A R ++
Sbjct: 613 AVERFGLALGLAFQIVDDALNIRGFEENL-KEEAEDIKDGKITYPTAIAMGRLEAADRQT 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
+ + ++++A ++ + A + A Q+ ++L L DS K +
Sbjct: 672 LWAILRKPTKEAADIQQAVELIMKVDATSECFLIARHRLQEMWNALDPLLEDSFPKLLMR 731
Query: 312 EVVDFCLQRL 321
F ++R
Sbjct: 732 TFCSFLVERK 741
>gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora]
Length = 436
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 5/282 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK +R + A L+ ++ ++ I +HTA+LL DDV
Sbjct: 132 KEKVLTGPYDYLNGHPGKDIRSQMVKAFNAWLDVPSESLEVITKVISMLHTASLLVDDVE 191
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + K+ +A+ S L G+
Sbjct: 192 DNSVLRRGFPVAHSIFGIPQTINTSNYVYFHALQELQKLKNPKAVSIFSEELLNLHRGQG 251
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + S + + ++ +G+ F
Sbjct: 252 MDLFWRDTLTCPTEDDYLEMVSNKTGGL---FRLGIKLMQAESRSPVDCVPLVNIIGLIF 308
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + K + ED GK + PVI + + + + + +
Sbjct: 309 QIADDYHNLWNREYTANKGMCEDLTEGKFSFPVIHSIR--SNPSNMQLLNILKQKTDDEQ 366
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ A M + T ++A+ + D K
Sbjct: 367 VKRYAVAYMETTGSFEYTRKVIKVLVERARKMTEEIDDGRGK 408
>gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
Length = 294
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/322 (20%), Positives = 132/322 (40%), Gaps = 56/322 (17%)
Query: 13 EKVNFLILKRICSDVE----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++ +L RI ++ + + + Y SGGKR+RP+L L + + E + +A
Sbjct: 10 QEIENYLLTRID-EIPNISTRLKEAMLYACSSGGKRIRPLLVLLISHLEEVELQKVLPVA 68
Query: 69 CAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
++E IHT +L+HDD+ RRGK+ + T++L GD LL+ F + + +
Sbjct: 69 ASLEMIHTYSLIHDDLPGMDNDDYRRGKLTVHKQFDEATAILAGDALLTLTFEELAQCQL 128
Query: 127 QEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+A + ++ + + S++ ++T E + KT L AA+ +
Sbjct: 129 SDAKKVRAIQVLGSASGASGMITGQMRDIASEHQEITLEQLKQIHADKTGQLLLAAIRLG 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
L+ +AL +G++ G+AFQ+ +D+ D + + GK G+D K T P IL
Sbjct: 189 LLVLEDATPYEEALLKFGVHFGLAFQIQNDLQDVCWDSEKTGKVTGQDAALEKNTYPSIL 248
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + +AK ++
Sbjct: 249 --------------------------------------GIDGAKLALEQEINQAKQAILS 270
Query: 301 LPDS-----SWKKSLMEVVDFC 317
+P+ ++ ++++ +
Sbjct: 271 IPNETTVQRQVQEIFIKILSYV 292
>gi|134057661|emb|CAK38059.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 101/277 (36%), Gaps = 3/277 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ + YL+ S GK +R A L + ++ + +HTA+LL DD+
Sbjct: 56 KEKIVRGPLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQ 115
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ ++ A + E EA E + L G+
Sbjct: 116 DNSKLRRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQG 175
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L ++ + ++ L + + + + + LG+ F
Sbjct: 176 MDLYW-RDSLTCPTEEDYIEMIANKTGGLFRLAIKLMQLETETKRQVYVIELADLLGVIF 234
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + + + K ED GK + +I + + + + +
Sbjct: 235 QIRDDYQNLQSGLYTKNKGFCEDLTEGKFSFLIIHSIH--SNPNNHHLLNILRQRSEDDS 292
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K A + + R S ++A ++ L
Sbjct: 293 VKKYAVEYIDSTGSFEYCRERLASLLEEADHMVKELE 329
>gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
Length = 357
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + V
Sbjct: 33 LRAAVDRLAPPMDTVAAYHFGWIDAAGNPADGDGGKAVRPALALLSAQAAGAAPEVGVPG 92
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 93 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAGEVLLELGTV 152
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S V+ E+ L + +KT L + A + +++
Sbjct: 153 EAGRAARRLTSATRALIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACACSIGAVLG 212
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + V L++YG +LG+AFQ VDD+L G+ + GK D R K +LPV+ A
Sbjct: 213 GADDEVADTLETYGHHLGLAFQAVDDLLGIWGDPDATGKQAWSDLRQRKKSLPVVAALAA 272
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ E T A + A +L
Sbjct: 273 GGPASERLGRILAEDAKSSDFENFSEEEFAARAALIEEAGGREWTAGEARRQHEVAVRAL 332
Query: 299 RC--LPDSSWKKSLMEVVDFCLQRL 321
+PD + L+ + DF + R
Sbjct: 333 DSVRMPD-QVRAQLVALADFVVVRK 356
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + + + + + + E + + Y + +GGKRLRP+L LA
Sbjct: 3 SNLNEFLTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYGK 62
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + + CA+E IHT +L+H +DD LRRGK V+G T+VL GD LL+++
Sbjct: 63 NEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTES 122
Query: 118 FCMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ S L G ++ V+ + + K
Sbjct: 123 FRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHARK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + ++ +++AG + + L+ + ++GIAFQ+ DD+LD G ++GK +G D
Sbjct: 183 TGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T P ++ + A + + +
Sbjct: 243 TANEKSTYP----------------------------------SLLTLSGA----KEKLH 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK+ + L ++ L ++ D R +
Sbjct: 265 EHITRAKEIVSNLQ--LEQQLLHDLCDLIASRDH 296
>gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
Length = 336
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 15/323 (4%)
Query: 13 EKVNFLILKRICS-------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ +L + ++ +++ GGK LR L + T L + +
Sbjct: 12 AAIQQYLLDALPKPEAATRLELAQFARMLRDYPERGGKMLRGTLLVYTGLAYGASLEGVL 71
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS--QAFCMVIE 123
+A A+E L+HDD+ D S RRGK A ++G ++ GD L + A +
Sbjct: 72 PVAAALELFQNWALIHDDIEDASDERRGKPALHKLYGVPLALNAGDALHARQWALLVEAG 131
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
LE + +V T L + E + + A ++A +
Sbjct: 132 ASRAVLLEFVRMVEQTAQGQHLEMSWMEGQRFDLGEPDYLEMVGQKAAYYTAVAPLRLGA 191
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G+ LGI FQ+VDDVL+ G+ + GK I D GK TL ++ Q
Sbjct: 192 LAAGAEPPAIFSEAGLKLGIGFQIVDDVLNLMGDPAKYGKEIAGDLWEGKRTLILLRFLQ 251
Query: 244 RGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + E+ ++ + + ++ + ++ A+ + A + ++L +
Sbjct: 252 QASPEERRRAEALLRIPREQKPAPEVQWLHQRLLQSGAVAQAQQVAERLLAEGLEALEPV 311
Query: 302 ----PDSSWKKSLMEVVDFCLQR 320
P ++ ++E++ ++R
Sbjct: 312 LRGAPRGAYGALVLEILQSLVRR 334
>gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7]
gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7]
Length = 299
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 11/246 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L+ + +L I ++ E + + + Y I +GGKR+RP+L LAT L
Sbjct: 2 NLKSFKENVIPSFEKEMLDYIGKELTKKEKLHEAMSYSIAAGGKRIRPLLLLATIQSLGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A+EFIHT +L+H +DD LRRGK + +V+G ++L GD LL+QA
Sbjct: 62 DIKKGYAASAALEFIHTYSLIHDDLPAMDDDDLRRGKPTSHIVYGEDIAILAGDALLTQA 121
Query: 118 FCMVIETKSQEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ ++ + + + E+ + ++KT
Sbjct: 122 FEIIADSDESSEKKVKLISALAKSAGPKGMILGQMADIQGEKKSLNLEELQFIHRNKTGE 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + + +IA + + L Y ++G+A+Q+ DD+LD G+V E+GKN G D +
Sbjct: 182 LLKFPIYAACVIADTTTEIEEQLMGYAEHIGLAYQIRDDILDVIGDVAEIGKNTGMDEAH 241
Query: 232 GKPTLP 237
K T P
Sbjct: 242 NKSTYP 247
>gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 360
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 76/351 (21%), Positives = 132/351 (37%), Gaps = 44/351 (12%)
Query: 13 EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLATALMLE---Y 59
V+ ++ S + DV+ + +GGKR+RP A
Sbjct: 9 AAVDEVLTTFFDSGRPALDAIYPAVAEAGDVLADFVLAGGKRVRPSFVYAGWRCGPDTAG 68
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV---------- 109
+ + AIE I L+HDD++D S RRG + +
Sbjct: 69 DDTMALRVGAAIELIQACALIHDDILDRSDTRRGNPTVHRRFEGLHAGRRLTGDSAHYGV 128
Query: 110 ------GDFLLSQAFCMVIETKSQEALEA------------LSLVACTLAEGELRQLSLS 151
GD L+ A +V A S + + G+L ++
Sbjct: 129 SAAILLGDLALAWADDLVHGIGPATDGWADPRPLPRSVGVLWSRMRTEVLGGQLLDITNE 188
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ D + V++ KTA A ++ + ++G ++ +L G++LGIAFQL DD
Sbjct: 189 SSRDESVTAAYRVMEYKTAAYTVARPLQLGAALSGADAALSGSLHRIGLDLGIAFQLRDD 248
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
VL G+ + GK G+D GK T + QR ++ + ++++ +S L A
Sbjct: 249 VLGVFGDPEQTGKPSGDDLIEGKRTALLAEGLQRASRTDGEVLRNSVG-RDLSDAELTAA 307
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
++ + AL + E + Q A D + L D + L + R
Sbjct: 308 RAVLTGSGALAEIERQIDDRLQAALDGIVALDVDDDARADLTWLARRITHR 358
>gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171]
Length = 157
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
I KTA LF+ + + + + G LG+AFQ++DDVLDY +GK
Sbjct: 2 RISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGK 61
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
+ D + G +LP+I A + F +S + ++ ++ + +
Sbjct: 62 PVLNDMKQGIYSLPLIYAMK---GHLAEFEPLLSQKLAMSDDASEQVLALISKYNGVEQA 118
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A Y KA ++ LP S++ + + L R
Sbjct: 119 FKLANKYTNKALREIKKLPAGSYRDDMYRLTKSILDR 155
>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
Length = 300
Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/308 (20%), Positives = 108/308 (35%), Gaps = 52/308 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + ++Y GGKR RP LT T ML D+ A A+E IH +L+HDD+
Sbjct: 33 DKALLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHDDLPA 92
Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA------- 137
RRG+ + + ++L GD L + AF ++ + + +
Sbjct: 93 MDDDAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSELAKA 152
Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ G+ L E+ L A++ A + ++ L
Sbjct: 153 SGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAILPQL 212
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 213 DKYSEAIGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYP----------------- 255
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
++ L + +A Q+A +L +P + L
Sbjct: 256 -----------------ALL----GLDGAQEKAQQLYQEALQALAAIPYN--TSQLEVFA 292
Query: 315 DFCLQRLN 322
+ ++R N
Sbjct: 293 RYIIERNN 300
>gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 51/323 (15%)
Query: 11 DMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
D++++ + + I ++ D + Y + +GGKR+RP+L L+T L + A
Sbjct: 7 DVKEIEKHLAQYIADLRAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQTA 66
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
CA+E +HT +L+H +DD LRRGK V+G ++L GD LL+ +F ++ E
Sbjct: 67 CAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAEDPG 126
Query: 127 QEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + L+A +N +T E+ ++ KT L ++
Sbjct: 127 LDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLRFSVLA 186
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++I G + + +LG+AFQ+ DD+LD GE ++GK +G D K T P +
Sbjct: 187 GAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEKIGKRVGSDESRHKSTYPAL 246
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L L + + + AK L
Sbjct: 247 LT--------------------------------------LEGAKQELRRHTRLAKQCLA 268
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ +LME+ R +
Sbjct: 269 --ETGAETGALMELTGMIETRDH 289
>gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208]
Length = 206
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETK 125
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F +
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSAHAS 132
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S E +E S + GEL Q+ S +VT +YL I KTA LF+ + + +
Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKTNVTVREYLTRISGKTAQLFALSCYSGATGSK 192
Query: 186 VQNSVRQALKSYGM 199
+ G
Sbjct: 193 ATRMTVAKCYNIGH 206
>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
Length = 294
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 55/326 (16%)
Query: 12 MEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
++++ +I +R+ + +E + + Y + +GGKR+RP L LAT + +
Sbjct: 9 LDEIKDIIEERMPAHIERLNSPDMLKNSMLYSLKAGGKRIRPALLLATMKSFQKDISQGI 68
Query: 66 LLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LACAIE IHT +L+HDD+ RRGK V+G ++L GD LL+ +F +V +
Sbjct: 69 DLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILAGDALLTYSFEIVAK 128
Query: 124 TKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
K + + L L+ G +N +T E ++ KT L S A
Sbjct: 129 MKGVDPAKTLCLIEELARAAGPEGMVGGQVADIEGENQKLTVEGLEYIHHHKTGALLSFA 188
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +A + ++ + LG+ FQ+ DD+LD G+ +GK +G D N K T
Sbjct: 189 IVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGDQAAIGKPVGSDDGNQKSTY 248
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
P +L L + + + + AK+
Sbjct: 249 PSLLT--------------------------------------LEGAKEKLHLHTLLAKE 270
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + + + L E+ D+ + R +
Sbjct: 271 YLYSVQMNH--RLLEELTDYVVNRNH 294
>gi|322796024|gb|EFZ18648.1| hypothetical protein SINV_14286 [Solenopsis invicta]
Length = 182
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+GE QL + + YL KTA L + ++ ++++ V + + YG N+
Sbjct: 7 QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKAVAILSEVDDRTIEMAFQYGRNV 66
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQLVDD+LD+ + MGK D + G T PV+ A ++ +
Sbjct: 67 GLAFQLVDDLLDFVASSSAMGKPTAADLKLGLATAPVLFACEQYPELNAMIM-----RRF 121
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+++KAF ++ ++ L T + A + +A + S ++++L+ + D + R+
Sbjct: 122 QEPGDVEKAFDLVHKSNGLEQTRFLAKKHCVEANKIAQSFTKSPYQRALIHMTDLVINRM 181
>gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus]
Length = 300
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 106/289 (36%), Gaps = 8/289 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + + T Y KA + + SL+ +V
Sbjct: 246 YCVQYLEDVGSFEYTRYTLRELEAKAYKQIEACGGNP---SLVALVKHL 291
>gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 309
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 123/319 (38%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ ++A A+E H
Sbjct: 29 EQLLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHC 88
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +++ S A
Sbjct: 89 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLLMRLSPLLPAAQV 148
Query: 135 LVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLI 183
+ + G+ LS VTEE + KT L A V +
Sbjct: 149 VAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQ 208
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 209 HEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 268
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 269 QL--------------------------------------EEEIAVHYQIAMDSLRLFGS 290
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 291 KAA--ALIELTKQLQNRSN 307
>gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
14600]
gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
14600]
Length = 305
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 57/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + +L + +E +I + + + + I + + Y + S GKRLRP+L A
Sbjct: 9 MDVRRELEERTLEA-EGIIRRFLPREEGYQKTIMEAMSYALMSPGKRLRPILMRECAACF 67
Query: 58 EYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLL 114
+ + AIE IH +L+HDD+ LRRGK +G VL GD LL
Sbjct: 68 DQTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLAGDALL 127
Query: 115 SQAFCMVIETKSQEALEALSLV----------ACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ AF +++ + + G++ + + + +
Sbjct: 128 NYAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKHRLDFI 187
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ KT L AA+ + +L+ G S ++ +G+AFQ+ DD+LD G+ +GK
Sbjct: 188 HELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGDEKTIGKP 247
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+G D RN K T L
Sbjct: 248 VGSDERNHKVTYVTFA--------------------------------------GLEGAR 269
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A S ++A ++L LP + LME+V + +R
Sbjct: 270 RDAESLTREALENLASLPRKN--DFLMELVAYLARR 303
>gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15]
gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter
crescentus NA1000]
gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15]
gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter
crescentus NA1000]
Length = 294
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 71/333 (21%), Positives = 124/333 (37%), Gaps = 50/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M L ++ + V + + + + + ++Y GKRLRP L T M
Sbjct: 1 MSDLAKRIVQAADIVTVALDELLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IH +L+H +DD +RRG+ + T++L GD L +
Sbjct: 61 DLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL------DVTEEDYLHVIKSKT 169
AF ++ + + S + LA + + + + KT
Sbjct: 121 AAFEIMAHPDTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQRLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + A E+ +IA + S R AL ++ +LG+A+Q+VDD+LD G+ +GK
Sbjct: 181 GALIAFAFEIPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGDEETLGKA----- 235
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK + + ++ L + R
Sbjct: 236 ----------------------------AGGKDAAKGKANYVTLL----GLDAAKERVTL 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ + L + L VDF L R N
Sbjct: 264 LAEQTRSHLEIF--GERAEHLRASVDFVLDRRN 294
>gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 342
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 24/317 (7%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + ++ + GGKRLRP D V A+EF+ + L+HDD++D
Sbjct: 25 PVAEAIEAFVLGGGKRLRPAFAYWGYRGAGGVDTDAVVTALAALEFVQASALIHDDLMDR 84
Query: 88 SALRRG----------------KVAARLVWGNQTSVLVGDFLLSQAFC--MVIETKSQEA 129
S RRG +G+ ++L+GD L + +
Sbjct: 85 SDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAAILLGDLCLVWSDELLHSAGLDPRTV 144
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL----EVSSLIAG 185
A E + Q + K + + + +A
Sbjct: 145 ARARPDFDEMRTEVTVGQYLDVVTQATGDASLERASKIARYKSAKYTVERPLLLGAALAD 204
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+R A +YG+ LG AFQL DDVL G+ + GK G+D R GK T V A +
Sbjct: 205 APADIRVAYSAYGLPLGEAFQLRDDVLGVFGDPAQTGKPAGDDLREGKRTYLVAAALEVA 264
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
+ + + + D + + + ++ AL TE R + A +L + D+
Sbjct: 265 DEAGREVVLAGLGDPTLDAAGVARLRDVITSTGALARTEQRIVTLTDAALAALTAVDLDT 324
Query: 305 SWKKSLMEVVDFCLQRL 321
++SL+++ +R
Sbjct: 325 EARQSLVDLAIAATRRT 341
>gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
Length = 303
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 119/333 (35%), Gaps = 50/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ L + + + V + + + + + ++Y GKRLRP L T +
Sbjct: 10 LPPLHERMQETADLVTMALDELLPRAEGFESRLTEAMRYAALGPGKRLRPFFALETGRLF 69
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IH +L+HDD+ RRG++ + T+VL GD L +
Sbjct: 70 DADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAVLAGDALQT 129
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKT 169
AF ++ + E + LA Q + + + KT
Sbjct: 130 VAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGVARMQRMKT 189
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A E+ +IA +L + +LG+A+Q+ DD+LD G+ + +GK G
Sbjct: 190 GALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGDPDLLGKAAGGKD 249
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
T V L L + + R
Sbjct: 250 AAKGKTNFVTLL-------------------------------------GLDEAKARVRL 272
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ K L + L + VDF L+R +
Sbjct: 273 LSEQCKARLEVF--GTDADILRDSVDFVLKRQS 303
>gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 402
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 108/307 (35%), Gaps = 28/307 (9%)
Query: 39 FSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
GGKR+RP+L + + L A+E I T L+ DDV+D S RRG+ A
Sbjct: 79 LRGGKRMRPLLLWWAMRACSGAESEAALRLGVALELIQTCALIQDDVMDRSHTRRGRPAV 138
Query: 98 R----------------LVWGNQTSVLVGDFLLSQAFCM------VIETKSQEALEALSL 135
+G +VL GD L A + Q S+
Sbjct: 139 HIALAEQRGLAAGSGPGAAFGASAAVLAGDLALVWADDTVGETFLPPGRRRQVRALWRSM 198
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+A L + + + +AG AL+
Sbjct: 199 RGEMIAGQYLDLRGQIGGGASAARALRTAHLKSALYSVERPVALGAALAGADEWTTDALR 258
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-- 253
S G+AFQL DD+L G+ GK G+D R GKPT + +A +
Sbjct: 259 SASRYAGMAFQLRDDLLGVFGDPAVTGKPSGDDIREGKPTYLLAVARTCADAAGDHRALA 318
Query: 254 --KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
+ + + + + L++ ++ A E +A G++A L D+ + L
Sbjct: 319 VLERAVGNPDLDEDGLEEVRSVLESTGARALVEDKAERLGERAARRLAQTELDAHAGEQL 378
Query: 311 MEVVDFC 317
+ ++
Sbjct: 379 LGLLHSV 385
>gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506]
gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506]
Length = 305
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 74/325 (22%), Positives = 124/325 (38%), Gaps = 58/325 (17%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
++ I + + E + +++ +GGKRLRP L + +A + + A A+E I
Sbjct: 22 IDAAIAQS-GAPGERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECI 80
Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
H +L+HDD+ +D+ LRRG+ + T++L GD LL+ AF ++ ++ E
Sbjct: 81 HCYSLVHDDLPAMDNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEV 140
Query: 133 L---------------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L + + + LD+ E+ + + KT L A
Sbjct: 141 RIALVASLAHAAGVAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQAC 200
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
E +L+ R +L Y +G AFQ+ DD+LD GE + +GK +G+D GK TL
Sbjct: 201 EAGALVGRATPEERASLDRYARAVGRAFQIADDLLDVEGEADTVGKAVGKDAAAGKATLV 260
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
L + +A+ +
Sbjct: 261 GKL--------------------------------------GVAGARAELARLVDEAEAA 282
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L S L E F R N
Sbjct: 283 LAGF--GSAATLLKEAARFIAARRN 305
>gi|260785488|ref|XP_002587793.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
gi|229272946|gb|EEN43804.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
Length = 309
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/304 (17%), Positives = 108/304 (35%), Gaps = 15/304 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
L + +V I + + +Y+ GK++R L A L+ D +
Sbjct: 8 VLSEKGEVEERI----------LMEPYEYVCQVPGKQIRLQLIEAFNYWLQIPQDKLQTI 57
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+ ++ +H A+LL DD+ D+S LRRG A ++G ++ +++ + V+
Sbjct: 58 SNVVQMLHNASLLIDDIEDNSKLRRGIPVAHSIYGTAHTINCANYVYFKGLATVLMLNHP 117
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E + L +G+ + E+ V+ K +
Sbjct: 118 ECTRIFTEQLLELHQGQGMDIYWRDTTTCPREEEYKVMVKKKTGGLFGLAVKLMQLFSDN 177
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
S LG+ FQ+ DD + + K+ ED GK + P+I +
Sbjct: 178 KS---DFVPLSDTLGLYFQIRDDFANLMSKEYTENKSYCEDLTEGKFSFPIIHGVH--HE 232
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ S + V+ K + + + T+ Q+A ++ + +
Sbjct: 233 QGTTQILSILRQKTNDVDVKKYCVDYLEKLGSFEYTKEVLRELEQQALQQIQDHGGNPYL 292
Query: 308 KSLM 311
++M
Sbjct: 293 SAMM 296
>gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
Length = 313
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 123/319 (38%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ ++A A+E H
Sbjct: 25 EQLLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHC 84
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +++ S A
Sbjct: 85 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLLMRLSPLLPAAQV 144
Query: 135 LVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLI 183
+ + G+ LS VTEE + KT L A V +
Sbjct: 145 VAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQ 204
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 205 HEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 264
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 265 QL--------------------------------------EEEIAVHYQIAMDSLRLFGS 286
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 287 KAA--ALIELTKQLQNRSN 303
>gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
Length = 306
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 118/336 (35%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++VN IL I + ++Y GGKRLRP L AT M
Sbjct: 9 DFNQQLAAHQQRVNQAILDFIAPLPFGNSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F + + S A A + + G+ L +
Sbjct: 129 FSILSEAAMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLTDLEQIHRHK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGAAGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDCAKTKA 270
Query: 288 YSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQRLN 322
Q+A +L L + S+ L + F ++R N
Sbjct: 271 LDLYQEAMSALNALSEQSYDIAPLQALACFIIERDN 306
>gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 338
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 87/327 (26%), Positives = 141/327 (43%), Gaps = 18/327 (5%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIF------------SGGKRLRPMLTLATALMLEYR 60
E V + + + V Y SGGK LRP + L +
Sbjct: 13 EMVEAAMRAAVERLDPRMRRVAAYHFGWVEADGSAPRGPSGGKALRPAMALLSGRAAGAD 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A A+EF+H +LLHDDV+D+ +RR + AA V+G ++L GD LL+ A +
Sbjct: 73 MARVVPAAVAVEFVHAFSLLHDDVMDNDRMRRHRPAAWTVFGVPAAILAGDALLALAEEV 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKN---LDVTEEDYLHVIKSKTAVLFSAAL 177
+++ + A A +A T + Q DV+ ++ + KTA LF+ +
Sbjct: 133 LLDRGTTGAHRAARHIAATTRKLIAGQALDLGFETRTDVSLDECTVMSMDKTAALFACSC 192
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++A N + AL +G +LG+AFQLVDD+L G+ GK + D R+ K +LP
Sbjct: 193 SIGAVLAEAPNRLALALSGFGEDLGLAFQLVDDLLGIWGQPEVTGKPVLNDLRSRKKSLP 252
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY--RAYSYGQKAK 295
V A GT ++ L +A ++ E E A +A+
Sbjct: 253 VTAALGAGTPASTRLALLYSQPDPLTEPQLVEAAALIEEAGGRAWAESAADARIAAAEAR 312
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +P ++ + V F R N
Sbjct: 313 LAEADIP-GDVREEFLAVARFVTHRDN 338
>gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652]
gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652]
Length = 327
Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/339 (21%), Positives = 123/339 (36%), Gaps = 58/339 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + ++ L+ + + E + + Y + +GGKRLRP L + +
Sbjct: 29 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 88
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+HDD+ RRGK + + T++L GD
Sbjct: 89 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGD 148
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF +V ++ + G ++ E +
Sbjct: 149 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 208
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A E +++AG RQ L+++G +G+AFQL DD+LD + MGK
Sbjct: 209 LQAMKTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAATMGK 268
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + +
Sbjct: 269 ATGKDAARGKGTLVALH--------------------------------------GMEWA 290
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
E + A+ L P +L+ F R +
Sbjct: 291 ETELRRHVADAEALLA--PYGVRASTLIAAAHFIADRKS 327
>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 294
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 13 EKVNFLILKRIC---------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
VN + + D + + ++Y + GGKR+RP+LT+A +
Sbjct: 16 AAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIAACQAAGGDTAH 75
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ ACA+E IH +L+HDD+ + +
Sbjct: 76 ALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVH 112
>gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
Length = 261
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 66/301 (21%), Positives = 113/301 (37%), Gaps = 52/301 (17%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91
++Y + GGKR RP L T ML + + ACA+E +H +L+H +DD LR
Sbjct: 1 MRYGLLLGGKRARPYLVYITGQMLGCQLTDLDTPACAVECVHAYSLIHDDLPAMDDDDLR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----------LA 141
RGK + + T++L GD L + AF ++ E + E + +
Sbjct: 61 RGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGMC 120
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L+ +E A++ A + ++ L Y +
Sbjct: 121 LGQALDLAAENRRITLDELETIHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYAAAV 180
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD + +GK G D + K T P +L
Sbjct: 181 GLAFQVQDDILDIISDTETLGKPQGSDQQLHKSTYPALL--------------------- 219
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L +A +A ++L+ +P + + L E + ++R
Sbjct: 220 -----------------GLEGAMNKAQVLLAEALEALQAIPYN--TEHLEEFARYVIERK 260
Query: 322 N 322
N
Sbjct: 261 N 261
>gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
Length = 348
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/334 (18%), Positives = 129/334 (38%), Gaps = 20/334 (5%)
Query: 2 KMLEDLTLKD--MEKV-NFLILKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATAL 55
K + ++ KD + + + + I + V +I GGK++RPML + A
Sbjct: 12 KNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPVIEIINRGGKKIRPMLMILLAH 71
Query: 56 MLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
L Y +N L+ +E H+ +L+ DD+ D + RRGK + L++G S+ +
Sbjct: 72 ALGYNNSDTENLYKLSMLLELPHSGSLIIDDIEDGALKRRGKPSIHLIYGLDNSINTANL 131
Query: 113 LLS-----QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ + ++ E L G+ ++L + + +
Sbjct: 132 IYFLPAKLIQTSNLKTSQKLIIYENFFTTLSNLHLGQGIDITLHNGTYIPSIEEYISLVE 191
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ I + + L + +N+G FQ++DD+ + + GK+ G+
Sbjct: 192 HKTSSLFGMAGFLAGILTNNENKAKNLYNTFLNIGTYFQMIDDIKNIK--DGVKGKDFGD 249
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII---MRENRALVDTE 284
D GK +LP+I + K + + + +K + + A+ ++
Sbjct: 250 DLIEGKKSLPIIYFLREKNFDNKIIHELAKIKNQPIDKVKEKILQFSNMINSSNAIQNSS 309
Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
A SY K + L + +K ++++V
Sbjct: 310 ILATSYLNKFIEELNSYKLINKYKDMIIKLVTKI 343
>gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 308
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 18/254 (7%)
Query: 1 MKMLEDLTLKDME-----KVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ + L + E ++N + +++ SD + D ++Y + +GGKRLRP+LTLA
Sbjct: 10 LTPMNKQLLTEFESKWRPQINQYLDEQLQACSDQSTLTDAMRYSVLAGGKRLRPLLTLAI 69
Query: 54 ALMLEYRGDNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------N 103
+ + + A+E +HT +L+HDD+ + +
Sbjct: 70 LDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAILAG 129
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
+ ++ + +Q A + + G++ + + +
Sbjct: 130 DALQPLTFEWIADSGLPASIVANQTLALAQATGPRGMVAGQIADVLGAG-QHLALPALQQ 188
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ + KT L A++ + A VQ +V++ L Y G+AFQ+ DD+LD ++GK
Sbjct: 189 LHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTSTPAQLGK 248
Query: 224 NIGEDFRNGKPTLP 237
+D K T P
Sbjct: 249 ATHKDADEHKNTYP 262
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 14/248 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+K +D + +L I + + + + Y + +GGKR+RP+L LAT L
Sbjct: 3 LKSFKDKV---IPSFEEEMLGYIGENGIKKAPLHEAMFYSLEAGGKRIRPLLLLATIQSL 59
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ A+EFIHT +L+HDD+ +D+ LRRGK + +V+G T++L GD LL+
Sbjct: 60 GGDIRKGYAVSAALEFIHTYSLIHDDLPAMDNDDLRRGKPTSHIVYGEDTAILAGDALLT 119
Query: 116 QAFCMVIETKSQEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
QAF ++ + + + + D++ E+ + ++KT
Sbjct: 120 QAFEIIAVSDASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFIHRNKT 179
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + +IA V + L Y ++G+A+Q+ DD+LD G V E+GKNIG D
Sbjct: 180 GELLKFPIYAACVIADAATEVEEQLMGYAEHIGLAYQIRDDILDVIGNVEEIGKNIGMDA 239
Query: 230 RNGKPTLP 237
+ K T P
Sbjct: 240 AHNKSTYP 247
>gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2]
gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2]
gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
Length = 272
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 13 EKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
EKV I + + +++ + + Y GGKR+RP+L L L + + +A A+
Sbjct: 4 EKVEERIREILRPGWDLLTEEAMLYSATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAV 63
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E HTA+L+HDD+ D++ RRGK + +G ++L GD L AF + + + +
Sbjct: 64 ELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQISKIGNSKI 123
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
E S A L GE + + ++ + + + A + I ++
Sbjct: 124 FEEFSETAYKLLLGEAMDVEFERRKMEISQEMVERMYAFKTGALFAFCFSAPFILKGKDH 183
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L G G+AFQ+ DD+ D G ++GK++G+D
Sbjct: 184 TKMKL--LGEKFGVAFQIYDDLKDILGSFEKVGKDLGKDTEK------------------ 223
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK- 308
++++ + A Y ++ + + ++
Sbjct: 224 ---------------------VTLVKKVG-IQKAREMADKYYEEVLKGIES--EGLFRTL 259
Query: 309 -SLMEVVDFCLQR 320
L E+ +R
Sbjct: 260 FLLKELKQMVEER 272
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 73/343 (21%), Positives = 132/343 (38%), Gaps = 61/343 (17%)
Query: 1 MKMLE----DLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M + D+ + +++ +L + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSISPVNADVLKQAQQRIQQDLLTALAAFSIPEPLKAAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LM-LEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ +V+G T++L GD
Sbjct: 61 SLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGD 120
Query: 112 FLLSQAFCM------------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L S AF + + + ++ L+ + + G++ L E
Sbjct: 121 ILQSMAFEILGSRLFDEQGQGIDSQIVLKQMQILATASSKMVAGQVLDLQAEGKQVDQTE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + + + L+ +G +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTVFAGTDPAIPKLRQFGQTIGLAFQVQDDILDITASTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A + +A D+L D + + L + F L R +
Sbjct: 263 LEQAKTYAQTLHDQAFDALAYFGDQA--QELTAISHFLLARKS 303
>gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus
kowalevskii]
Length = 310
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/297 (17%), Positives = 114/297 (38%), Gaps = 8/297 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
+L+R + ++ + YL GK +R LT L + ++ ++ +H A+
Sbjct: 13 LLERNGNQERILLEPFHYLRQVPGKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNAS 72
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
LL DD+ D+S LRRG A ++G ++ +++ A ++ + + + +
Sbjct: 73 LLIDDIEDNSKLRRGIPVAHNIYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLL 132
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
+L EG+ + E+ + K + + + + K
Sbjct: 133 SLHEGQGMDIWWRDAYVCPTEEEYKDMVIKKTGGLFGLG---IRLMQIFSENKCDFKPLW 189
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
NLG+ FQ+ DD + + + K+ ED GK + P+I A + + S +
Sbjct: 190 ENLGLYFQIRDDYANLKSPEYKENKSYAEDLTEGKFSFPLIHAIKTQPEN--TQVMSILK 247
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ K + + + T+ +K + + L + + L+ +D
Sbjct: 248 QRTTDNDIKKYCIEFLDKVGSFDYTKSVLLDLEEKLRVQIAELGGNPY---LLAFID 301
>gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
Length = 352
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/331 (19%), Positives = 120/331 (36%), Gaps = 30/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
+ SD + + ++ + GGKRLRP+ + + +LL A+E +H
Sbjct: 21 AHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWA 80
Query: 79 LLHDDVVDDSALRR------------GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L+HDD++D SA RR + +Q + L A + S
Sbjct: 81 LVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVS 140
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG- 185
+ AL+ A + + +++ + +
Sbjct: 141 KVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTV 200
Query: 186 ------------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ V + +G +LG+AFQL DDVL G+ GK G+D ++GK
Sbjct: 201 SRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPTVTGKPSGDDLKSGK 260
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T+ V A + + + K +++ +++ ++ A E R +
Sbjct: 261 RTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALT 320
Query: 292 QKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
Q+A +L P ++ K L E+ R
Sbjct: 321 QRALATLASAPINATAKAGLSELAMMAANRS 351
>gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
43021]
gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
43021]
Length = 322
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 6/296 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+V +L+ E + V+ L GK +RP L A A D V L +E
Sbjct: 19 SQVTDRLLRLADGLPEPVRAPVRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLGALVE 78
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
IH A+LLHDDV+D++ RRG AA G + ++L G + + A
Sbjct: 79 LIHLASLLHDDVIDEAETRRGAPAAHTAVGTEQAMLAGLACFAL-VGTEAADLGEGVAGA 137
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+S+ LA GEL + + + YL +++SKTA LF + + A +
Sbjct: 138 VSMAVAKLAYGELLDVERAFDTAFPLPAYLELVQSKTAELFRLCCLLGAAEARSGHGEAD 197
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL +G LG+ FQ++DD LD R N GK +G D G P + A
Sbjct: 198 ALVRFGTALGVTFQILDDCLDLR--PNHSGKPVGTDHALGLFGAPTLYA---LRADSGGE 252
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ + ++ + + ++ L A + +A +L LP +
Sbjct: 253 LATLLLSPSFGTSDMPEVYSLVEARGGLEAAARLAADWHDRALAALDELPAGGPRD 308
>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
Length = 285
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 55/321 (17%)
Query: 15 VNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + K I + + + Y + +GGKR+RPML AT L+ V A A+E
Sbjct: 7 IDESLFKEISERKIEPALKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALE 66
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+ AF ++ E ++
Sbjct: 67 MIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFE 126
Query: 131 EALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++L+ + ++N VT E+ + KT L A+ ++ I
Sbjct: 127 TRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKI 186
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + L+ + N+GI FQ+ DD+LD G+ +MGK G D K T P +L
Sbjct: 187 AEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLT-- 244
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CL 301
L + + AK +L
Sbjct: 245 ------------------------------------LDGAKRALNEHVTIAKSALSGHDF 268
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
D + L+++ D R N
Sbjct: 269 DD----EILLQLADLIALREN 285
>gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083]
gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083]
Length = 284
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 122/321 (38%), Gaps = 53/321 (16%)
Query: 13 EKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V+ + + S DV ++ ++Y +GGKRLR L +A + + ACA
Sbjct: 6 AEVDQHFTRVLSSFADVPIV-QAMRYAT-TGGKRLRAFLVRESARVCGVDVARSIAPACA 63
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE +H +L+H +DD LRRG+ + W + T+VL GD L + AF +V E E
Sbjct: 64 IEALHAYSLVHDDLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHE 123
Query: 129 ALEALSL------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSS 181
S A A Q + + I + + ++
Sbjct: 124 DPLVRSTLALTLARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSAT 183
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
A + + ALK+YG LG+AFQ+ DD+LD + +GK +D GK T +L
Sbjct: 184 AGAVLAKADTNALKTYGDALGLAFQIADDILDVTSDAETLGKAAQKDAEAGKATFVSLL- 242
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + RA + A D+L
Sbjct: 243 -------------------------------------GLDGAKSRAEMLVESACDALSIY 265
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
S L +V F ++R +
Sbjct: 266 --GSDADHLRDVARFVIERRS 284
>gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894]
Length = 304
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 68/329 (20%), Positives = 123/329 (37%), Gaps = 55/329 (16%)
Query: 9 LKDMEKVNFLILK--RICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++E + ++L + + E + + Y + +GGKR+RP L + +A +
Sbjct: 16 AHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPFLVVESAALFGGDAGA 75
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + A+E +H +L+H +DD LRRGK + + T++L GD LL+ AF ++
Sbjct: 76 ALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLTYAFDII 135
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKTAVLF 173
++ + + + LA + + KT L
Sbjct: 136 AAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDEAGIIRLQAMKTGALI 195
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A E ++I+ R L+++G +G+AFQL DD+LD + MGK G+D GK
Sbjct: 196 RFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSDTATMGKATGKDAARGK 255
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TL + + E + +
Sbjct: 256 GTLVALH--------------------------------------GMEWAETELRRHVRD 277
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+ L P + L+ F R +
Sbjct: 278 AEALLA--PYGARASILIAAAHFIADRKS 304
>gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
Length = 295
Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 15 VNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
V I I + + +V+++ GGKR+RP++ L + + + A A+E
Sbjct: 22 VEAGIEDSIARIEDSSLKKMVEHVCHFGGKRIRPIILLLASEICSGSYSRSLDAALAVEM 81
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L+HDD++D +RR +A +G ++L GD+L++++ + + +
Sbjct: 82 MHSASLIHDDLLDQGLIRRNLPSAPEKFGPSRALLCGDYLIAKSIAFISPYGEKVIRDFG 141
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
L + E+DY I KTA LF+ + + + G ++ +
Sbjct: 142 KAGMDMAEGEVL--DLRLDDDKFGEDDYFKCIYKKTASLFAISASIGAYTGGADEALAER 199
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G +LG A+Q+VDD+L++ G++ + TLP I
Sbjct: 200 FSFFGNSLGTAYQIVDDILEFLE------VVEGKESKFTSETLPHIYM------------ 241
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
K+S E AL + + AK++L S + L ++
Sbjct: 242 ------RKMSKEE------------ALEKSIGSVKQHVSAAKETLGTFRACSARNKLFQI 283
Query: 314 VDFCL 318
D+
Sbjct: 284 TDYIT 288
>gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Nomascus leucogenys]
gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Nomascus leucogenys]
gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Nomascus leucogenys]
gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Nomascus leucogenys]
Length = 300
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALIK 289
>gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1]
gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1]
Length = 359
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 122/352 (34%), Gaps = 43/352 (12%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPDV-VKYLIFS--GGKRLRPMLTLAT 53
D+E++ I + S + + D + + S GGKRLR +LTL +
Sbjct: 4 STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 63
Query: 54 ALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-------- 99
+ E D + LACA+E TA L+HDD++DDS LRRG+ +A
Sbjct: 64 FRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALASGTHS 123
Query: 100 --------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
+ + ++A + + + + + L+
Sbjct: 124 DAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVELN 183
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSYGMNLGIAFQL 207
D E + + + R S G+ LG+AFQL
Sbjct: 184 PLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLGLAFQL 243
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G GK +G D R GK T+ + A + E+ E +
Sbjct: 244 ADDLLDVIGSSLNTGKPVGGDIREGKRTVLLADALSGADEPERAELIGMWEAPSRCEEQV 303
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL--MEVVDFC 317
++A + A+ + R + +K + L +K L F
Sbjct: 304 RRAITLFASTGAIERSHGRIRNLWNASKSIIDALDVPDDRKELLIRACARFV 355
>gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
27678]
gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
27678]
Length = 391
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 122/352 (34%), Gaps = 43/352 (12%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPDV-VKYLIFS--GGKRLRPMLTLAT 53
D+E++ I + S + + D + + S GGKRLR +LTL +
Sbjct: 36 STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 95
Query: 54 ALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-------- 99
+ E D + LACA+E TA L+HDD++DDS LRRG+ +A
Sbjct: 96 FRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALASGTHS 155
Query: 100 --------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
+ + ++A + + + + + L+
Sbjct: 156 DAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVELN 215
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSYGMNLGIAFQL 207
D E + + + R S G+ LG+AFQL
Sbjct: 216 PLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLGLAFQL 275
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G GK +G D R GK T+ + A + E+ E +
Sbjct: 276 ADDLLDVIGSSLNTGKPVGGDIREGKRTVLLADALSGADEPERAELIGMWEAPSRCEEQV 335
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL--MEVVDFC 317
++A + A+ + R + +K + L +K L F
Sbjct: 336 RRAITLFASTGAIERSHGRIRNLWNASKSIIDALDVPDDRKELLIRACARFV 387
>gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
Length = 289
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71
+N + K + ++V+ I ++ Y + +GGKRLRP+L LAT L ++ + +AC I
Sbjct: 15 INEYLNKHLANEVDDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKEITEDEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG S+L GD LL + E
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDALLPMGIQWIAEGSKSAE 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
Q +A+ + + ++++ + + KT L A++++++++
Sbjct: 135 LVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFINRMEWLKTGCLIEASVKMAAVLV 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G L + G ++Q+ DD++D E GK +D GK +L
Sbjct: 195 GASQIEEVKLVDFAKVFGRSYQIYDDLVDVVESSQEAGKATHKDQEKGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++AKD L L
Sbjct: 251 ----------------------------------GIDKSRKELTDLIKQAKDDLNGL 273
>gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
H37Rv]
gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis
AF2122/97]
gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
[Mycobacterium tuberculosis H37Ra]
gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis F11]
gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis H37Ra]
gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 02_1987]
gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis EAS054]
gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T85]
gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 1435]
gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis C]
gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis str. Haarlem]
gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 605]
gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
02_1987]
gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 210]
gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 4207]
gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN R506]
gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu001]
gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu002]
gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu003]
gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu004]
gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu005]
gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu006]
gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu008]
gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu007]
gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu009]
gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu010]
gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu011]
gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu012]
gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN V2475]
gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
(GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
[Mycobacterium tuberculosis H37Rv]
gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
(GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
[Mycobacterium bovis AF2122/97]
gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis C]
gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis str. Haarlem]
gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
[Mycobacterium tuberculosis H37Ra]
gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis F11]
gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 1435]
gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 605]
gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
02_1987]
gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu001]
gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu002]
gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu003]
gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu004]
gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu005]
gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu006]
gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu007]
gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu008]
gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu009]
gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu010]
gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu011]
gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu012]
gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium
tuberculosis CDC1551A]
gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis W-148]
gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 4207]
Length = 352
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/331 (19%), Positives = 120/331 (36%), Gaps = 30/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
+ SD + + ++ + GGKRLRP+ + + +LL A+E +H
Sbjct: 21 AHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWA 80
Query: 79 LLHDDVVDDSALRR------------GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L+HDD++D SA RR + +Q + L A + S
Sbjct: 81 LVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVS 140
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG- 185
+ AL+ A + + +++ + +
Sbjct: 141 KVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTV 200
Query: 186 ------------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ V + +G +LG+AFQL DDVL G+ GK G+D ++GK
Sbjct: 201 SRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGK 260
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T+ V A + + + K +++ +++ ++ A E R +
Sbjct: 261 RTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALT 320
Query: 292 QKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
Q+A +L P ++ K L E+ R
Sbjct: 321 QRALATLASAPINATAKAGLSELAMMAANRS 351
>gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8]
gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8]
Length = 272
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 13 EKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
EKV I + + +++ + + Y GGKR+RP+L L L + + +A A+
Sbjct: 4 EKVEERIREILRPGWDLLTEEAMLYSATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAV 63
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E HTA+L+HDD+ D++ RRGK + +G ++L GD L AF + + + +
Sbjct: 64 ELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQISKIGNSKI 123
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
E S A L GE + + ++ + + + A + I ++
Sbjct: 124 FEEFSETAYKLLLGEAMDVEFERRKMEVSQEMVERMYAFKTGALFAFCFSAPFILKGKDH 183
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L G G+AFQ+ DD+ D G ++GK++G+D
Sbjct: 184 TKMKL--LGEKFGVAFQIYDDLKDILGSFEKVGKDLGKDTEK------------------ 223
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK- 308
++++ + A Y ++ + + ++
Sbjct: 224 ---------------------VTLVKKVG-IQKAREMADKYYEEVLKGIES--EGLFRTL 259
Query: 309 -SLMEVVDFCLQR 320
L E+ +R
Sbjct: 260 FLLKELKQMVEER 272
>gi|62510700|sp|Q9P885|GGPPS_RHIRA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|7649674|emb|CAB89115.1| geranylgeranyl pyrophosphate synthase [Mucor circinelloides f.
lusitanicus]
Length = 303
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 110/282 (39%), Gaps = 5/282 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++I + YLI GK +R L A L L D ++ I +H A+L+ DD
Sbjct: 11 RSTEDIILEPYTYLISQPGKDIRAKLISAFDLWLHVPKDVLCVINKIIGMLHNASLMIDD 70
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V DDS LRRG A ++G ++ ++++ A V++ ++ + L G
Sbjct: 71 VQDDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNIPSMMQVCTEELINLHRG 130
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ +L +L E+ + + L ++ + + +GI
Sbjct: 131 QGIELYWRDSLTCPTEEEYIDMVNNKTSGL---LRLAVRLMQAASESDIDYTPLVNIIGI 187
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD ++ + K ED GK + P+I A + + I+ S
Sbjct: 188 HFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPIIHAIR--KDPSNRQLLNIISQKPTS 245
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+E K A ++R+ + ++ ++ L +
Sbjct: 246 IEVKKYALEVIRKAGSFEYVREFLRQKEAESLKEIKRLGGNP 287
>gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
Length = 338
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 122/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+S ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T S +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163]
gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163]
Length = 303
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 66/319 (20%), Positives = 113/319 (35%), Gaps = 54/319 (16%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
+ + + + ++Y GGKRLRP L T + ++ A A+E IH
Sbjct: 21 HFIADLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAY 80
Query: 78 TLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+H +DD LRRG+ + +G ++L GD L + AF ++ + + + L
Sbjct: 81 SLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRL 140
Query: 136 VA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ G+ L + A++ +A +
Sbjct: 141 AMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVALERIHRHKTGALIRAAVRLGAFAAGD 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L
Sbjct: 201 AGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLL----- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---- 301
L + +A Q++ SL L
Sbjct: 256 ---------------------------------GLDNARKKAQELYQESLASLDDLIASS 282
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S L + +F ++R
Sbjct: 283 PTSLNIAPLQALANFIVER 301
>gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
Length = 295
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M++V+ I + I D + + ++ L GGKRLR L L A LL
Sbjct: 1 MQRVDSEITRLIKEIDYDEVTNLFNKL--QGGKRLRAGLILKIA----PTCTTAPLLGAI 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+D++ LRRG + G++T+V++GD L S+AF ++
Sbjct: 55 VELIHAASLLHDDVIDEATLRRGVASINATDGSKTAVMLGDILYSKAFSELVAFD----K 110
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
E +++ ++ ++ K D ++ + + A +
Sbjct: 111 EIAKVISSSVTALSKGEMMDVKMASAFNSDEERYLEMLYLKTATLIEACAHAAALLAQKD 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ YG NLG++FQ++DD+LD + +GK DF GK TLP I +Q + ++
Sbjct: 171 ALSHSIYGKNLGLSFQIIDDILDITSDEATLGKPAMNDFVEGKCTLPYIYLYQHLGEEDR 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
S E++ +M++++ + + A +A ++ D+ L
Sbjct: 231 EKLSSLHAKALSRDESI-WIREMMQQHKTIEKSFALAQKLSNEAMSVIK--DDTE----L 283
Query: 311 MEVVDFCLQRL 321
+E++ ++R
Sbjct: 284 VEILQTMIKRS 294
>gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster]
gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster]
gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster]
gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster]
gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster]
Length = 338
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 122/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+S ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T S +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
Length = 298
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 80/319 (25%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ ++A A+E H
Sbjct: 18 EQLLNEIIIPAPKIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHC 77
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ S A
Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVLTRLSPLLPAAQV 137
Query: 135 LVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLI 183
+ + G+ LS L VTEE + KT L A V +
Sbjct: 138 VAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFEMVLAAQ 197
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V ++ ALK+YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 198 NEVSEQIKSALKTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 258 QL--------------------------------------EEEIAVHYQIAMDSLRLFGS 279
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 280 KAA--ALIELTKQLQNRSN 296
>gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
Length = 328
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 88/293 (30%), Positives = 143/293 (48%), Gaps = 11/293 (3%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTAT 78
K + S +I + +L S GK +R +A ++ E + + V LA A+E +H AT
Sbjct: 29 EKHLASAPPVIRNYTAHLAKSTGKFIRAYGLMACSMDEEDKVPADAVTLASAVELLHLAT 88
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLV 136
L+HDDV+DD+ RRG + +G + +V+ GD+LLS A + K+Q +
Sbjct: 89 LVHDDVIDDADTRRGIETLQKRFGKKAAVICGDYLLSLALKLASSIPQKNQYEALDMPNY 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
C + GELRQ + NLD++ YL +IK KTA LF A+ ++++ + +
Sbjct: 149 LCRICMGELRQEINNGNLDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYRK 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G ++G+ FQL+DD +DY E E KN+ D+ G TLP+I A +
Sbjct: 209 AGNDVGMIFQLMDDCIDYEMEETEAKKNVRSDYEEGVVTLPLIHAMNQDESFSGQVKNGL 268
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
++ K+ + + E T+ A Y KA +++ L S KK+
Sbjct: 269 VSA--------KELYTKVLEAGGTAYTKAVAGRYYGKASNTIGNLGLSEAKKA 313
>gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 367
Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 81/324 (25%), Positives = 135/324 (41%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 43 LRAAVDRLAPPMDTVAAYHFGWIDAQGRPAEGDGGKAVRPALALLSAEAAGAPAEAGIPG 102
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 103 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 162
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 163 EAGRAARRLTTASRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 222
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 223 GADDRTADTLEAYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 282
Query: 245 GTKREKNFWKSTINDGKISV------ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + +D K S E ++ E T A A ++L
Sbjct: 283 GGPASERLGELLADDAKSSDFDSFSEEEFAARAALIEEAGGREWTAQEARRQHAVAIEAL 342
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + L E+ DF + R
Sbjct: 343 HGVDMPERVRAQLTELADFVVVRK 366
>gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
Length = 301
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 7 LTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + + + I + + +V+ L GK LR L LA V
Sbjct: 1 MVAELIPAIQARIQSFLEEVKSPQVLKMVQNL--GQGKMLRSQLILAICS----NHPQIV 54
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
IE I +A+LLHDDV+D + RRG + +GN ++++GD S+AF +
Sbjct: 55 DFCAIIEMIQSASLLHDDVIDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAF-CELANF 113
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S+E ++ ++ L+ GE++ + + + YL I+ K+A L +A+ ++L+ G
Sbjct: 114 SKEIVQLIAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASLIAASSCGAALLQG 173
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
++ S + +G + G+AFQ+VDD+LD +GK DF+ GK TLP IL Q+
Sbjct: 174 LEPSKY---RDFGRHFGMAFQMVDDLLDITQSQEVLGKPALSDFKEGKSTLPYILLHQKL 230
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++ S S E + +E + A Y A +++ +
Sbjct: 231 NLADQKKLASYFKVE--SEEVQEWCLEKFKEFGIAQEVLKEARGYVDLALEAI----NGE 284
Query: 306 WKKSLMEVVDFCLQRL 321
+L + L+R
Sbjct: 285 DNVALERMASAILERT 300
>gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
Length = 290
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++ + S + I D + Y + GGKR+RP+L L T + + D+ + +A
Sbjct: 8 DSIDKWLENYFISKDGYEKTIYDSMSYSLNIGGKRIRPLLFLYTYSLFKDEIDDVLDIAG 67
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+H +DD LRRG + +G+ ++L GD LL++A ++ + +
Sbjct: 68 AIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMNIMFQYCIE 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEV 179
+ +++ ++ + E + + KT L +AA+
Sbjct: 128 SESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGALINAAIVS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++++AG ++ + L YG LG+AFQ+ DDVLD G+ +++G
Sbjct: 188 AAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESKLG----------------- 230
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+S EN K+ + E L + E + ++ + L+
Sbjct: 231 -------------------KKTLSDENKNKS-NFITEYG-LEECEKQCIKLTEECLELLK 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
L ++L ++ + L R +
Sbjct: 270 SL--GKDTEALEDITKYLLYRES 290
>gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH]
gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH]
Length = 287
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 16/281 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GK +R ++ N LA +E IH A+LLHDDV+D++ RRG +
Sbjct: 22 KGKGIR-------GKLITIIDPNAQKLAAVVESIHLASLLHDDVIDEADTRRGAASINAK 74
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+G+ T+V++GD + S+AF + ++ + +S L++GEL + LS ++++ ++
Sbjct: 75 YGDHTAVMLGDIVYSRAF-YELIDFGKDIAKTVSNAVYLLSQGELEDVKLSNSINLDKDK 133
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
Y+ +I KTA + A R +YG N+GIAFQ++DD+LD +
Sbjct: 134 YMQMIYKKTAS---LIEAACAAGAISAGLDRNKFATYGKNIGIAFQIIDDLLDITQDEET 190
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK D+ GK TLP I F+ + +K + K+ ++ M+E+ +
Sbjct: 191 LGKPSMHDYYEGKTTLPYIYLFEVLEEDDKEKLMNLYRK-KLQKHEIEWIRNKMQEHGII 249
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A + A ++++ +L + + + R
Sbjct: 250 EKCYNEAKELIESAVNAIKIYNIP----ALEVIANKVIDRK 286
>gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118]
Length = 289
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 65/297 (21%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + +V+ I + Y + +GGKRLRP+L LAT L + + + +AC I
Sbjct: 15 IDDYLAKHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + + +
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSNSAE 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ +A+ + + ++++ + + KT L A++E++++ A
Sbjct: 135 LVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L Y G ++Q+ DD++D E GK +D GK +L
Sbjct: 195 KATDIEQVKLIDYAKAFGRSYQIYDDLVDVVETSEEAGKATHKDQEEGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++AKD L L
Sbjct: 251 ----------------------------------GIDKSRKELRDLIKQAKDDLHGL 273
>gi|322705366|gb|EFY96952.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium
anisopliae ARSEF 23]
Length = 337
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/292 (18%), Positives = 110/292 (37%), Gaps = 6/292 (2%)
Query: 17 FLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
L+ I + E +I YL+ GK +R + A L D ++ + +H
Sbjct: 26 ALLHSSIAAGYEEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPADKLEVIKRIVMLLH 85
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
A+LL DD+ D S LRRG + ++G ++ ++ A + + +A E +
Sbjct: 86 NASLLIDDIQDSSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTE 145
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+L G+ + + E+ + S +A +N +
Sbjct: 146 ELLSLHRGQGMDIYWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNWFVFHTR 205
Query: 196 SY---GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+ LG+ FQ+ DD L+ + + K GED GK + P+I + + +
Sbjct: 206 DFVPLVNVLGVIFQIRDDYLNLQSHAYTVNKGFGEDLTEGKYSFPIIHSIR--SDPTNIQ 263
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
S + V+ A ++ + + + +A+ ++ + +S
Sbjct: 264 LSSILKQRTTDVDVKLFAVECIKATGSFEHCKEKIAELVAEARQLIKEMGNS 315
>gi|145596949|ref|YP_001161246.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145306286|gb|ABP56868.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 384
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 67/357 (18%), Positives = 123/357 (34%), Gaps = 43/357 (12%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLAT 53
L T + + V+ ++ + ++++ + + + + +GGKRLRP
Sbjct: 29 LAAYTEEVVAAVDDTLVDFLATEIDALAAIDSSAGGFATTARDSVLAGGKRLRPTFAYWG 88
Query: 54 AL--MLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL----------- 99
+ + A+E +H L HDDV+D SA RRG+ A +
Sbjct: 89 WRGVVGGAEPLPPVLPALAALELLHAFALTHDDVMDSSATRRGRPTAHVAVAAQHAAAGR 148
Query: 100 -----VWGNQTSVLVGDFLLSQAFCMVIE---------TKSQEALEALSLVACTLAEGEL 145
+G +VLVGD L A ++ + + L
Sbjct: 149 RGDSGKFGENVAVLVGDLCLVWADRLLAQAVLPPARLLEVRHCYDQMRVETVAGQYLDVL 208
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + + V + + + A YG +G AF
Sbjct: 209 GESDPTNWSVERALQVARYKTASYTVRWPLLFGARLAGVVADSPLIAAYDRYGQAIGEAF 268
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+L G+ GK G+D R GKPT+ ++LA ++ +
Sbjct: 269 QLCDDLLGVYGDPATTGKPAGDDLRTGKPTVLLMLARTLADPTQRQALDQVGAGAEDW-- 326
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
+K+ ++ E A+ E +A +L + D+ + +L + R
Sbjct: 327 EVKRLAEVVAETGAVEQVEQMISDRVDEALTALDVPSIDDT-ARTALAGLAAVATHR 382
>gi|317028384|ref|XP_001389988.2| farnesyltranstransferase [Aspergillus niger CBS 513.88]
Length = 344
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 7/278 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ + YL+ S GK +R A L + ++ + +HTA+LL DD+
Sbjct: 56 KEKIVRGPLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQ 115
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ ++ A + E EA E + L G+
Sbjct: 116 DNSKLRRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQG 175
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L + TEEDY+ +I +KT LF A+++ ++ + + LG+
Sbjct: 176 MDLYWRDSLTCPTEEDYIEMIANKTGGLFRLAIKL----MQLETETKSYVIELADLLGVI 231
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + + K ED GK + +I + + + + +
Sbjct: 232 FQIRDDYQNLQSGLYTKNKGFCEDLTEGKFSFLIIHSIH--SNPNNHHLLNILRQRSEDD 289
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K A + + R S ++A ++ L
Sbjct: 290 SVKKYAVEYIDSTGSFEYCRERLASLLEEADHMVKELE 327
>gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Macaca mulatta]
gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Macaca mulatta]
gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Macaca mulatta]
gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Macaca mulatta]
Length = 300
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLRELESKAYKQIDARGGNPELVALIK 289
>gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653]
gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653]
Length = 365
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + V
Sbjct: 39 LRAAVDRLAPPMDTVAAYHFGWIDADGRPAAGDGGKAVRPALALLSAQAAGADPEVGVPG 98
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A + +
Sbjct: 99 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAGEILLELGTA 158
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A + +++
Sbjct: 159 EAGRATRRLTSATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAASIGAVLG 218
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV------ 238
G + L+ YG +LG+AFQ VDDVL G+ GK D R K +LPV
Sbjct: 219 GADDRTADTLERYGYHLGLAFQAVDDVLGIWGDPVSTGKQTWSDLRQRKKSLPVVAALAA 278
Query: 239 --ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ + K S E ++ E T A A +
Sbjct: 279 GGRASEDLAQILAADAHKPEDEFADFSEEEFATRAALIEEAGGRDWTSAEARRQYATAIE 338
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQR 320
+L + + + + + DF + R
Sbjct: 339 ALDEVDMPAEVRDQFVALADFVVVR 363
>gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
Length = 296
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+D +++E ++ I + SD + + ++KY I +GGKR+RP++ LA
Sbjct: 3 SNFDDFVKQNVELLDQHIDELFDSDSTLNTDLKMMMKYSIDAGGKRVRPLVLLAILKAFG 62
Query: 59 YRGD-NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + +A A+E +HT +L+HDD+ +D+ LRRG+ + +G ++L GD LL+
Sbjct: 63 KTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAILAGDALLT 122
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKT 169
AF + T ++ +++ +++ G ++ + + H+ KT
Sbjct: 123 VAFQWISSTNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAELKHLHHLKT 182
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ E + ++ + V + +K + N G+AFQ+ DD++D +GK G+D
Sbjct: 183 GKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTESTAILGKTAGKDV 242
Query: 230 RNGKPTLPV 238
K T
Sbjct: 243 DLNKNTYVN 251
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
Length = 296
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +V+ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
N+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKNILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
Length = 296
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +V+ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
N+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKNILEET-------------IAKAKDAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
Length = 337
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 77/331 (23%), Positives = 121/331 (36%), Gaps = 62/331 (18%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ V + +R+ + + +++ + GGKRLRP LT+ TA ML
Sbjct: 46 DAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIETARMLGGPYAGA 105
Query: 65 VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--- 119
+ IE +H +L+HDD+ +D+ LRRGK + T++LVGD LL+ AF
Sbjct: 106 LAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGDALLTFAFEILA 165
Query: 120 ---MVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTA 170
+ + + L A L Q ++ + L + KT
Sbjct: 166 DPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVDATLQLQAMKTG 225
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + +++ +++ G R AL +YG LG AFQ+ DD+LD MGK G+D
Sbjct: 226 ALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDREASSEAMGKRTGKDKE 285
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK TL L L
Sbjct: 286 AGKATLVDRL--------------------------------------GLDGARAECERL 307
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +L P +L E F + R
Sbjct: 308 VAVCEAALA--PWGEAAATLREAARFTVARK 336
>gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL
J1-208]
Length = 248
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 5/249 (2%)
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + + K A +
Sbjct: 3 ELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTQIKDVAAHK 62
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G +
Sbjct: 63 MLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADY 122
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV +
Sbjct: 123 QKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPV----FFAMEDPFL 178
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + E + ++++ A E A +Y +KA + L LP K L
Sbjct: 179 KKRISQITEETPAEEIAVLVEEVKKSGA-KQAEDIATAYLKKAVEILDSLPQVPELKPLK 237
Query: 312 EVVDFCLQR 320
++V +R
Sbjct: 238 QIVRVLDKR 246
>gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 285
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 38/309 (12%)
Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++ VN I + I + ++ I + + + + GKRLRP+ L A M R D+ A
Sbjct: 5 NEVKAVNAGIDRIISAVELPEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDATDAA 64
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
A+E IHTA+L+ DD+VD+ RRG+ + +G +++ GD+L+S+A ++ +K E
Sbjct: 65 LAMECIHTASLIQDDIVDEGLKRRGEDTSHEKFGMFLAMVSGDYLISRAM--MLMSKYDE 122
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
A S+ TE DY+ ++ KTA++F ++ E+ + IAG
Sbjct: 123 KTILAFSKAGLYMAEGELLDVKSRKYKPTEADYVECVRKKTAIMFESSFEMGARIAGADE 182
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + GM GIA+Q+VDD+++Y +E K+ + F +
Sbjct: 183 KHAELCRLMGMEFGIAYQIVDDLIEYTQIDDEHKKSALQSFILPMVYAQTMS-------- 234
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+++A + + K L PDS K+
Sbjct: 235 ------------------VQEAVDL---------CMRQVEERIAKIDRVLAGYPDSEAKQ 267
Query: 309 SLMEVVDFC 317
L EVVD
Sbjct: 268 KLCEVVDLL 276
>gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
Length = 289
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 65/297 (21%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + +V I ++ Y + +GGKRLRP+L LAT +L + + + +AC I
Sbjct: 15 IDDYLAKHLADEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-- 127
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSNSAK 134
Query: 128 ---EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L + G ++Q+ DD++D E GK +D GK +L
Sbjct: 195 RATDIEQVKLVDFAKAFGRSYQIYDDLVDVVETSEEAGKATHKDEEEGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + + ++AKD L L
Sbjct: 251 ----------------------------------GIDKSRKELKNLIKQAKDDLHGL 273
>gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10]
gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1]
gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
Length = 272
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 49/313 (15%)
Query: 13 EKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
EKV I + + +++ + + Y GGKR+RP+L L L + + +A A+
Sbjct: 4 EKVEERIREILRPGWDLLTEEAMLYSATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAV 63
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E HTA+L+HDD+ D++ RRGK + +G ++L GD L AF + + + +
Sbjct: 64 ELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQISKIGNSKI 123
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
E S A L GE + + ++ + + + A S ++
Sbjct: 124 FEEFSETAYKLLLGEAMDVEFERRKMEISQEMVERMYAFKTGALFA--FCFSAPFILKEK 181
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+K G G+AFQ+ DD+ D G ++GK++G+D
Sbjct: 182 DHTKMKLLGEKFGVAFQIYDDLKDILGSFEKVGKDLGKDTEK------------------ 223
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK- 308
++++ + A Y ++ + + ++
Sbjct: 224 ---------------------VTLVKKVG-IQKAREMADKYYEEVLKGIES--EGLFRTL 259
Query: 309 -SLMEVVDFCLQR 320
L E+ +R
Sbjct: 260 FLLKELKQMVEER 272
>gi|308388535|gb|ADO30855.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha710]
Length = 127
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+K YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++ N
Sbjct: 1 MKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDV 60
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
++ + + S +K + + AL + A A +L LPDS K +++++
Sbjct: 61 RTALENADRSY--FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQL 118
Query: 314 VDFCLQRLN 322
L R++
Sbjct: 119 AKESLVRVS 127
>gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
[Mycobacterium marinum M]
gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
[Mycobacterium marinum M]
Length = 346
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 3/249 (1%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +RP L++ A D + A A+E +H +LLHDD++D RR + AA +V+
Sbjct: 68 GKAVRPALSITCARAAGGAMDAAIPAAVAVELVHDCSLLHDDIMDGDVTRRHRPAAWVVY 127
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G ++L GD LL A +V E S AL A L G+ L+ + V +
Sbjct: 128 GVPMAILTGDALLVLALDLVHEGAS---GSALRKAALELCAGQSADLAFEQRTKVWLPEC 184
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
L + + KT LF A ++ +L AG + V +G +LG++FQLVDD+L G +
Sbjct: 185 LQMAQQKTGALFGVACQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDILGIWGSESVT 244
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK + D ++ K +LPV+ A GT +S L A ++ +
Sbjct: 245 GKPVFSDLQSRKKSLPVVAALSSGTAAGAKLETLLGGTEALSDHELSYAADLIEDAGGRA 304
Query: 282 DTEYRAYSY 290
E A +
Sbjct: 305 WAEGEALRH 313
>gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5]
Length = 742
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 122/310 (39%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
E + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142
S +RRG + +G T++ G + K+ + V
Sbjct: 493 SVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYFDVLLAGHA 552
Query: 143 GELRQLSLSKNLDVTEEDYLH----------VIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G+ + L + + KT A ++ ++ + +
Sbjct: 553 GQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P+ +A R ++
Sbjct: 613 AVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYPIAIAMGRLEAVDRQT 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
+ + ++ +A ++ + A + A Q+ ++L L DS K +
Sbjct: 672 LWAILRKPTKEAADILQAVELIMKVDATSECFLIARHRLQEMWNALDPLLEDSFPKLLMR 731
Query: 312 EVVDFCLQRL 321
F ++R
Sbjct: 732 TFCSFLVERT 741
>gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia]
gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans]
gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia]
gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans]
Length = 338
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 122/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+S ++ LG+ FQ+ DD + + K+ ED GK PVI A + T
Sbjct: 178 FSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T + +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLETLDAEARSEVARLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 306
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M + + ++V+ I + + DV ++ ++Y + GGKRLRP L T +
Sbjct: 3 MIDFANELRESHQRVDEAISRYLIMFLKQDVSLLMQAIRYSVLLGGKRLRPFLVYQTGKL 62
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
R N A AIE IH +L+HDD ++D+ LRRG + +G +VL GD L
Sbjct: 63 FGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDALH 122
Query: 115 SQAF 118
+ AF
Sbjct: 123 TLAF 126
>gi|163847875|ref|YP_001635919.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525750|ref|YP_002570221.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163669164|gb|ABY35530.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449629|gb|ACM53895.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 305
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/313 (19%), Positives = 122/313 (38%), Gaps = 15/313 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ D+ +V ++ +R+ + +I V +++ RLR ++ LA A + Y
Sbjct: 4 AIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNYTDA 63
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
V A A+E I AT HD ++D+ A RR A W + +++GD+L + A +
Sbjct: 64 QVVHAAAAVELIEAATRAHDTLIDEHA-RRTGRGANGSWDHGVVLMIGDYLFALAAGEMA 122
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + S + EG+L ++ + Y ++ + L +AA + L
Sbjct: 123 RSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALATYWQRTEALSGALLAAAAQAGIL 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +++ + +GM+LG+A +L ++ D E + T P+
Sbjct: 183 CGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAPEV 242
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
Q + + ++R + L A+ +L+ LP
Sbjct: 243 QAVFDHP-------------TPATIAAVLPLIRNHG-LPKARAALIEQQHAARQALQQLP 288
Query: 303 DSSWKKSLMEVVD 315
S L +++D
Sbjct: 289 AGSTTAWLNQLID 301
>gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
Length = 287
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 7 LTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN 63
+ +++N + + ++ + Y + +GGKRLRP LTLA + +
Sbjct: 1 MIHDYQKQINQYLSDHVENECAEPTLATSTIYSLMAGGKRLRPALTLAICDAFQQSINQD 60
Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +CA+E +HT +L+HDD+ +D+ LRRG +G + L GD LL+ AF +
Sbjct: 61 VLRASCAVELLHTYSLIHDDLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTLAFQWL 120
Query: 122 IETKSQEALEALSLVACTL------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + ++ + D + + KT L
Sbjct: 121 SDNNLATTTRLSLVRELATAAGPAGMVAGQAMDIHNEGHHLALPDLQLLHEKKTGALIRY 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A+ +I + L +G G+AFQ+ DD++D G +MGK + +D K T
Sbjct: 181 AVLAGGIITNQAPETKHLLARFGEYYGLAFQIYDDLMDVVGSEAQMGKAVHKDQVEAKNT 240
Query: 236 LP 237
P
Sbjct: 241 YP 242
>gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 742
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 57/310 (18%), Positives = 114/310 (36%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
E + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S +RRG + +G T++ G +
Sbjct: 493 SVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYFDVLLAGHA 552
Query: 148 LSLSKNLDVTEEDY---------------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + KT A ++ ++ + +
Sbjct: 553 GQGLDIYRLDYLMPKVVESGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P+ +A R ++
Sbjct: 613 AVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYPIAIAMGRLEAVDRQT 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
+ + ++ +A ++ + A + A Q+ ++L L DS K +
Sbjct: 672 LWAILRKPTKEAADILQAVELIMKVDATSECFLIARHRLQEMWNALDPLLEDSFPKLLMR 731
Query: 312 EVVDFCLQRL 321
F ++R
Sbjct: 732 TFCSFLVERT 741
>gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate
Synthase From Corynebacterium Glutamicum
gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Complexed With Isoprenyl
Diphosphate And Magnesium
Length = 380
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 76/328 (23%), Positives = 121/328 (36%), Gaps = 36/328 (10%)
Query: 28 EMIPDVVKYL---IFSGGKRLRPMLT---LATALMLEYRGDN---HVLLACAIEFIHTAT 78
+ D V +L + +GGKR+RP+ A + + + A ++EFI
Sbjct: 45 APVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACA 104
Query: 79 LLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVI 122
L+HDD++D S RRG +G S+L GD L A +
Sbjct: 105 LIHDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDXALVWAEDXLQ 164
Query: 123 ETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ ++ + L S + E A +
Sbjct: 165 DSGLSAEALARTRDAWRGXRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARP 224
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+
Sbjct: 225 LHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTV 284
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ LA QR K+ + S E++ +R A + E R +
Sbjct: 285 LLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVITEHIRATGAEEEVEQRISQLTESG 344
Query: 295 KDSLR--CLPDSSWKKSLMEVVDFCLQR 320
L +PD + L + +R
Sbjct: 345 LAHLDDVDIPD-EVRAQLRALAIRSTER 371
>gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
Length = 296
Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++L + K ++N + +++ SD + D ++Y + +GGKRLRP+LTLA +
Sbjct: 4 QLLTEFESKWRPQINQYLDEQLQACSDQSTLTDAMRYSVLAGGKRLRPLLTLAILDTFDI 63
Query: 60 RGDNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLV 109
+ + A+E +HT +L+HDD+ + + +
Sbjct: 64 TTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAILAGDALQPL 123
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + +Q A + + G++ + + + + + KT
Sbjct: 124 TFEWIADSGLPASIVANQTLALAQATGPRGMVAGQVADVLGAG-QHLALPALQQLHREKT 182
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ + A VQ +V++ L Y G+AFQ+ DD+LD ++GK +D
Sbjct: 183 GALIHYAVQAGLIQAQVQPTVQELLLQYADAYGLAFQIYDDILDVTSTPAQLGKATHKDA 242
Query: 230 RNGKPTLP 237
K T P
Sbjct: 243 DEHKNTYP 250
>gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
Length = 326
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 2 LRAAVSRLAAPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALALLSAEAAGAAAEVGIPG 61
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 62 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPALAILVGDALFALANEVLLELGTV 121
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ + L +G+ + +S V+ ++ L + +KT L + ++ + +++
Sbjct: 122 EAGRATRRLTTASRKLIDGQAQDISYEHRERVSVQECLEMEGNKTGALLACSVSIGAVLG 181
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 182 GADDRTADKLEEYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 241
Query: 245 GTKREKNFWKSTIND------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D S E ++ T A A +L
Sbjct: 242 GGPACEELARLLAADAKSNDFENFSEEEFAHRAALIEAAGGRQWTADEARRQHAIAIRAL 301
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ ++ L+ + DF + R
Sbjct: 302 DDVDMPQRVREQLVALADFVVVRK 325
>gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
Length = 306
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 118/336 (35%), Gaps = 54/336 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++VN +L I + ++Y GGKRLRP L AT M
Sbjct: 9 DFQQQLAAHQQRVNQALLDFIAPLPFGDSDLVAAMRYGAVLGGKRLRPYLVYATGQMFGL 68
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH +L+H +DD LRRG+ + +G ++L GD L + A
Sbjct: 69 SLTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLA 128
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ E + L + G+ L
Sbjct: 129 FSILAEANMPDVANKDRLSMIAELAKASGVAGMCGGQALDLEAEARQISLTNLEQIHRYK 188
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A++ +A + L Y +G+AFQ+ DD+LD G+ +GK G
Sbjct: 189 TGALIRAAVRLGALAAGAPGRRALPLLDRYSEAIGLAFQVQDDILDVIGDTATIGKRQGS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P ++ L + + +A
Sbjct: 249 DQQLGKSTYP----------------------------------ALL----GLDNAKAKA 270
Query: 288 YSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQRLN 322
Q+A +L L + S+ L + F ++R N
Sbjct: 271 LDLYQEALSALNALSEQSYNITPLQALACFIIERDN 306
>gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36]
gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36]
Length = 296
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/333 (17%), Positives = 112/333 (33%), Gaps = 55/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + + ++N + ++ + + + ++Y + GGKR+RP++ A ML
Sbjct: 2 QLSNSITRYQGRINDYLQQQINLLPTHDTQLAAAMEYGLLQGGKRIRPVIVYAVGEMLGV 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH +L+H +DD LRRG+ + + + T++L GD L A
Sbjct: 62 NLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDALQPFA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F M+++ E + + I
Sbjct: 122 FEMLLDCALAPEAEKNRFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAIHNNK 181
Query: 178 EVSSLIAGVQNSVRQALKS----------YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + + + + +G+AFQ+ DD+LD + +GK G
Sbjct: 182 TGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISDTETLGKPQGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D K T P ++ L + +A
Sbjct: 242 DVELNKSTYP----------------------------------ALL----GLAGAQEKA 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ Q+A +L +P L + ++R
Sbjct: 264 QALYQQAIFALETIPH--DTTVLALFTQYIIER 294
>gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 293
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ ++ + M + + + + + +Y + GGKR+R +L L+ ML
Sbjct: 5 EQYQNYLAQAMAALETACGRFLP-EESEVCRAARYSLMGGGKRIRAVLVLSVCDMLGGSM 63
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A+E +H +L+HDD +D+ LRRG+ + + T++L GD LL++AF
Sbjct: 64 QAAQQFAAAVEMLHCYSLIHDDLPCMDNDDLRRGRPSCHKAFSEATAMLAGDVLLTEAFE 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT------EEDYLHVIKSKTAVLF 173
V + ++ + A G + + E+ + ++KT L
Sbjct: 124 TVANAPADASVCVQAARALGAGAGSRGMVYGQELDLKYEALAATEDQLRLIHRNKTGALI 183
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+AA+++ + A + + L+ Y LG+ FQ+VDDVLD ++GK IG D NGK
Sbjct: 184 NAAIQMGAAAAKADEAQCRVLEQYAYGLGLVFQIVDDVLDVTSTPEQLGKPIGSDSENGK 243
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
T + + K + + T + + + +
Sbjct: 244 TTFVTLYGAEGAMKLAHDLNQETCTELHRNFGEKAAFLEQLAQ 286
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEKNLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ + KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEDT-------------IAKAKDAISSLQLQD--EYLVSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi]
Length = 299
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 10/292 (3%)
Query: 12 MEKVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
M + N ++ E + Y+ GK++R L LA L +
Sbjct: 1 MSEFNDILAKCRDKSCQKEQDETLLQPFAYIQQIPGKQIRSKLALAINHWLAIPVEKLAP 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ +++L A V +
Sbjct: 61 IGEIVQMLHNSSLLIDDIEDNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+A + + L G+ ++ N E + + +
Sbjct: 121 PDATKVYTEQLLELHRGQGMEIYWRDNFACPTESEYKQMTIRKTGGLFMLAIRLMQLFSD 180
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L + G+ FQ+ DD + + K+ ED GK + P+I A Q T
Sbjct: 181 NKKDFSKLAAIL---GLYFQIRDDYCNLSMKEYSENKSYCEDLTEGKFSFPIIHAVQ--T 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ + VE + ++ + + T S Q+A+ L
Sbjct: 236 QKHDKQVLHILRQRTRDVEVKRYCISLLEKLGSFQYTRDVLDSLDQEARKEL 287
>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
Length = 300
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 9 LKDMEK----VNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++M++ + L++K + I + ++Y + +GGKRLRPML T + G
Sbjct: 8 KEEMKERTEVIEKLLVKYLPKAEGYQSQIMEAMEYSVMAGGKRLRPMLMQETYRLFGGEG 67
Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A+E IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF
Sbjct: 68 KEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDALLNYAFE 127
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 57/323 (17%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD------NHV 65
V ++ + + + + ++Y + GGKR+R + A G +
Sbjct: 19 VEDVLDDLMPPAEVLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLD 78
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A+E IH +L+HDD +D+ LRRG+ + + T++L GD L AF ++
Sbjct: 79 RAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGDALQPLAFDLLAS 138
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKN------LDVTEEDYLHVIKSKTAVLFSAAL 177
AL + + A G ++ ++ + KT + + ++
Sbjct: 139 MPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTMHSMKTGAMLACSV 198
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++AG ++ RQAL +Y +G+AFQ+VDD+LD + +GK G+D KPT
Sbjct: 199 ALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKPTYV 258
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + A A+ +
Sbjct: 259 SLL--------------------------------------GLSEARAFAEELRVAAQAA 280
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
L L D+ + L ++ DF + R
Sbjct: 281 LEPLGDAGLR--LAQLADFIVLR 301
>gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus
cuniculus]
Length = 300
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIK 289
>gi|68535811|ref|YP_250516.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|260578102|ref|ZP_05846023.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|68263410|emb|CAI36898.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|258603741|gb|EEW16997.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 389
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 77/376 (20%), Positives = 130/376 (34%), Gaps = 60/376 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLAT 53
L+ V+ + + + E V+ I +GGKR+RP A
Sbjct: 13 LDSPLSAVPSAVDAQLKEYLSRSQEEFSPIGSLVGGAITVLSDFIVNGGKRVRPTFAWAG 72
Query: 54 ALM----LEYRGDN--------------------HVLLACAIEFIHTATLLHDDVVDDSA 89
D + A EFI L+HDD++D S
Sbjct: 73 IRAAIEGGGGSPDALCGKGGDATSSSSADFNQGAILNALSAFEFIQACALIHDDIIDRSD 132
Query: 90 LRRGKVAAR-----LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------------ 132
RRG A + +SQA + +
Sbjct: 133 TRRGFSTAHRTFESKHRERGWLGSSEHYGVSQAILIGDLAFAWADDLYNGSGLSATALQR 192
Query: 133 ----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQ 187
+ + G++ ++L N D VIK KTA A + + +AG
Sbjct: 193 ARPAWRAMRTEVIAGQILDIALEANGSEDVADSFAVIKYKTASYTVARPLHIGAALAGAN 252
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L++ G ++G AFQL DD L G+ GK G+D R GK T + A + G +
Sbjct: 253 EQTQSMLRNVGQDIGEAFQLRDDQLGVFGDPEVTGKPSGDDLRTGKRTTLINEALRSGGE 312
Query: 248 REKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDS 304
+ ++ + G+ S E ++++ I+ + A E + Q+A +SL+ L
Sbjct: 313 PQVAALRAGLGKGEDSTEADIERLRDIIYDTGAQAKVEKLIEARTQRAIESLQAGGLGA- 371
Query: 305 SWKKSLMEVVDFCLQR 320
L ++ + R
Sbjct: 372 DITAELTQLAEKLTHR 387
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4]
gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4]
Length = 283
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 70/303 (23%), Positives = 112/303 (36%), Gaps = 50/303 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ +++ + +GGKRLRP L + +A + + D + + A+E +H +L+H +DD
Sbjct: 21 LLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGAALECLHCYSLVHDDLPAMDD 80
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
LRRG+ + + T++L GD LL+ AF ++ ++ A + + LA
Sbjct: 81 DDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTTLPDAAKTALVLALARAAGLG 140
Query: 148 LSLSKNLDVTEEDYL--------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + KT L A E +IAG N R+ L+ +G
Sbjct: 141 GMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEAGPVIAGASNEDRERLRQFGE 200
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G AFQL DD+LD + MGK G+D GK T
Sbjct: 201 LIGRAFQLADDLLDLTADAATMGKATGKDAGRGKGT------------------------ 236
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ + E +A L P LM F
Sbjct: 237 --------------LVALKGQAWAEAELDRLVDQAVALLS--PYGERAAVLMAAARFVAN 280
Query: 320 RLN 322
R N
Sbjct: 281 RKN 283
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 58/334 (17%), Positives = 117/334 (35%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+D ++ +++ + + + + + Y + +GGKR+RP+L LAT L
Sbjct: 6 DSLDDFFQRNRAQIDQALANLLPEPEGPKARLNEAMGYCVLNGGKRVRPLLLLATTEALG 65
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLV 109
+ CA+E IH +L+HDD+ + + +
Sbjct: 66 GDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGLQTL 125
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
L+++ E+ Q E G S+ + E+ + KT
Sbjct: 126 AFSALTESSGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMHLEKT 185
Query: 170 AVLFSAALEVSS-LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A++ + + + L+ + +G+AFQ+ DD++D + + +GK G+D
Sbjct: 186 GALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSVLGKTAGKD 245
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
KPT +L L + +A
Sbjct: 246 AERNKPTYTSLL--------------------------------------GLEQAKLKAL 267
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L+ L + + L ++ F ++R +
Sbjct: 268 QLHNEALSQLQALGLQNSR--LQDLASFMIERTH 299
>gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 742
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 62/310 (20%), Positives = 126/310 (40%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 DTLFRPVRSMIDRGGKSWRSLVLVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142
S +RRG+ + +G T++ G A + K+ + V
Sbjct: 493 SMVRRGEKCVHVEYGVATAINAGSACYFMAPRAARIQDLPPEKASRIYQLYFDVLLAGHA 552
Query: 143 GELRQLSLSKNLDVTEEDYLH----------VIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G+ + L + + KT ++ ++ ++ +
Sbjct: 553 GQGLDIYGLDYLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAMACVLCEAPAALSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P+ +A R +++
Sbjct: 613 AVEKFGLTLGLAFQIVDDALNIRGFEGNL-KEAAEDIKDGKITYPIAIAMGRLGAADRHT 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
+ +++ A ++ + A+ + A Q+ DSL L DS K +
Sbjct: 672 LWVILRKPTKEEADIRDAVELIMKVEAITECLLIARHRLQEMWDSLDPLLEDSFPKLMMR 731
Query: 312 EVVDFCLQRL 321
+ F ++R
Sbjct: 732 TLCSFLVERT 741
>gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi]
gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi]
Length = 337
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/286 (18%), Positives = 106/286 (37%), Gaps = 5/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D
Sbjct: 21 DEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLIDDIED 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ ++ L A V + EA + + L G+
Sbjct: 81 NSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEATKVYTEQLLELHRGQGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ + E ++ + + L + G+ FQ
Sbjct: 141 EIYWRDSFVCPSESDYKLMTVRKTGGLFMLAIRLMQLFSANKEDYTKLTAIL---GLYFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK PVI A + ++++ + +E
Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--SQKQDKQVLHILRQRTHDIEV 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K ++ + + T S +A+ L L + + L+
Sbjct: 256 KKYCIGLLEKLGSFQYTRKVLESLDLEARAELTRLGGNPYLDRLLN 301
>gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 122/333 (36%), Gaps = 55/333 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+++ + ++ ++ + E+I D + Y + +GGKRLRPML T +
Sbjct: 6 SFKEIQKEKTAQIERILKAYLPRAQGYQEVIMDAMSYSMLAGGKRLRPMLMQETYRLFGG 65
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ A
Sbjct: 66 ADSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYA 125
Query: 118 FCMVIETKSQEALEA----------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ G S + E + +
Sbjct: 126 FETAASAFETAPEKSLLIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLEFIYRL 185
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A++ + +++AG + Q ++ +G+AFQ+ DD+LD +GK +
Sbjct: 186 KTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDVISTTEVLGKPVHS 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D +N K T V + L +
Sbjct: 246 DEKNEKMTYVVW--------------------------------------KGLDAAKQEV 267
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+KA +R L L +++ + R
Sbjct: 268 EHLSRKAISDVRALNPKD--DYLEILLESLIYR 298
>gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5]
Length = 742
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 122/310 (39%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
E + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142
S +RRG + +G T++ G + K+ + V
Sbjct: 493 SVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYFDVLLAGHA 552
Query: 143 GELRQLSLSKNLDVTEEDYLH----------VIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G+ + L + + KT A ++ ++ + +
Sbjct: 553 GQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P+ +A R ++
Sbjct: 613 AVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYPIAIAMGRLEAVDRQT 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
+ + ++ +A ++ + A + A Q+ ++L L DS K +
Sbjct: 672 LWAILRKPTKEAADILQAVELIMKVDATSECFLIARHRLQEMWNALDPLLEDSFPKLLMR 731
Query: 312 EVVDFCLQRL 321
F ++R
Sbjct: 732 TFCSFLVERT 741
>gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 289
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 121/314 (38%), Gaps = 58/314 (18%)
Query: 9 LKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
D+ + + + + + + +K GGKR+RP + G +
Sbjct: 32 KADLALMEA-LRNNMENPFADPLIEFMK-----GGKRIRPAILFLINEACGGGGSPEL-A 84
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E IHTA+L+HDD++DDS RRG + + G + ++L+ DF+LS +V + + +
Sbjct: 85 AAAVELIHTASLIHDDIIDDSDSRRGIPSFHIKHGTEMAILIADFILSIVLEIVSKYEDK 144
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
LS ++ GE+ ++ L + D + + + +
Sbjct: 145 RIGRLLSEATKLMSIGEMMEVILLRRGDPISVEDYLNVLKYKTASLFQTASSLGALIAGR 204
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ + + + YG+ LG+++Q+ DD+LD+
Sbjct: 205 DDLYEEMGLYGLYLGLSYQIRDDLLDW--------------------------------- 231
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ +++ N E A Y KA D L +PDS K
Sbjct: 232 -----------------GEKGEITYLLKGNDVREFLEDLALQYSMKAMDKLNFIPDSPQK 274
Query: 308 KSLMEVVDFCLQRL 321
+ L E+ + ++R
Sbjct: 275 RILREIAAYSIERK 288
>gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
Length = 296
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/316 (19%), Positives = 119/316 (37%), Gaps = 52/316 (16%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
++ + + D +++ + +GGKR+RP+L L+ + + ++ AIE +H +
Sbjct: 21 LIDELPDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVPKTDQMAISMAIECVHAYS 80
Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+H +DD LRRG + + T++L GD L + AF ++ + EA
Sbjct: 81 LVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAFTVLADAPLSTYAEAKRPQ 140
Query: 137 ----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ G+ L+ + +E A+L + V+ + +
Sbjct: 141 LLSVLAKSAGYVGMCGGQAIDLASTGESISLDELKRLHKLKTGALLRACVEMVAIVSEDL 200
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L +Y ++G+AFQ+ DD+LD G ++GK G D GK T P L
Sbjct: 201 LPEAKVDLMAYAADIGLAFQVQDDILDVVGSSEKLGKPAGSDEALGKNTFPAKL------ 254
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ + A +L LP +
Sbjct: 255 --------------------------------GMEGAKRELEMLHDNALQALARLPYN-- 280
Query: 307 KKSLMEVVDFCLQRLN 322
SL+ + ++R +
Sbjct: 281 TDSLIAFSELLVKRDH 296
>gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda
melanoleuca]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +V+ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + T KA + + +L++
Sbjct: 246 YCVHYLENVGSFEYTRSTLKELESKAYKQIDARGGNPELVALIK 289
>gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 304
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 68/319 (21%), Positives = 119/319 (37%), Gaps = 54/319 (16%)
Query: 18 LILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
L+ +R+ + E + +++ + +GGKRLRP L + +A + D + +A A+E
Sbjct: 26 LLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGKGSDAVLRVAAALEC 85
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IH +L+H +DD LRRG+ + ++L GD LL+ AF ++ ++
Sbjct: 86 IHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDGLLTYAFDIISSDETDLDAA 145
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLI 183
+ LA + + + KT L A E ++I
Sbjct: 146 IRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGIITLQAMKTGALIRFACEAGAII 205
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + R+ + +G +G+AFQL DD+LD + MGK G+D GK TL +
Sbjct: 206 ANASSEDRERMAEFGSAIGLAFQLADDLLDVTADAEAMGKATGKDAAAGKATLVSLH--- 262
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ T + +A+ L
Sbjct: 263 -----------------------------------GIDWTRKQLSGLVAQAESLLAPF-- 285
Query: 304 SSWKKSLMEVVDFCLQRLN 322
L + F +R +
Sbjct: 286 GKDADILKQAARFIAERQS 304
>gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine
bacterium HF10_19P19]
Length = 338
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 54/303 (17%), Positives = 112/303 (36%), Gaps = 8/303 (2%)
Query: 2 KMLEDLTLKDMEKV-NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+ L D+ V + I++R+ S + ++ GK+LR + LA
Sbjct: 16 EKLDAL--PDLSAVLSAFIVRRLPSGKHPLATAAQHHFKRTGKQLRGRMALAAGDSFGVP 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +H A+L+HDD+ D +RRG + +G T++ +GD+L++ +F +
Sbjct: 74 RTASLPWAAAVEVLHNASLVHDDICDGDMVRRGAPSVWAFYGRDTALALGDWLIALSFEL 133
Query: 121 VIETKS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
E + + +S+++ +A Q + + I + A
Sbjct: 134 AAEAAYLGQTPQLVSILSRHMAATTAGQALEFEVRAYPDWSGYMDISTGKTAPLFIASVE 193
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + L + G +Q+ +D+L+ G+ R + +
Sbjct: 194 GIAHLAGRRDAIRPLNRFFSAAGGCYQIANDMLNVIGKDGAESPASDLLRRAPNAVIVMF 253
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ D ++ +R + AL T S ++A+ S
Sbjct: 254 QTTLDKHTATAFDKWLSSGDTHGAL----TWQEHVRRSPALTMTSSALLSMLEEAEASSA 309
Query: 300 CLP 302
P
Sbjct: 310 AFP 312
>gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 296
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++L + K ++N + +++ SD + D ++Y + +GGKRLRP+LTLA +
Sbjct: 4 QLLTEFESKWRPQINQYLDEQLQACSDQSTLTDAMRYSVLAGGKRLRPLLTLAILDTFDI 63
Query: 60 RGDNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLV 109
+ + A+E +HT +L+HDD+ + + +
Sbjct: 64 TTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAILAGDALQPL 123
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + +Q A + + G++ + + + + + KT
Sbjct: 124 TFEWIADSGLPASIVANQTLALAQATGPRGMVAGQIADVLGAG-QHLALPALQQLHREKT 182
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A++ + A VQ +V++ L Y G+AFQ+ DD+LD ++GK +D
Sbjct: 183 GALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTSTPAQLGKATHKDA 242
Query: 230 RNGKPTLP 237
K T P
Sbjct: 243 DEHKNTYP 250
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 16/271 (5%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTAT 78
L + S+ +++ + ++Y + +GGKR+RP+L L +A L + + +A ++E +HT +
Sbjct: 5 LNSLNSN-QILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYS 63
Query: 79 LLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+HDD+ + LRRGK +G +VL GD LL+ +F + T + +
Sbjct: 64 LIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLIS 123
Query: 137 AC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L ++ E+ H+ KT L A +++ ++
Sbjct: 124 QLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQ 183
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--- 247
+ L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D K T P++L Q +
Sbjct: 184 LELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALV 243
Query: 248 ---REKNFWKSTINDGKISVENLKKAFIIMR 275
+ + I+++ ++ +
Sbjct: 244 EVLNNTENLLKEMANNDIAIDLFEQLLDYFK 274
>gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568]
Length = 249
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ L+ + + S+ E+ + + ++Y GGKRLRPML LA + + E +
Sbjct: 16 AQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMA 75
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
AIE IH +L+HDD+ +
Sbjct: 76 AIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKY 109
>gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354]
Length = 308
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 128/320 (40%), Gaps = 55/320 (17%)
Query: 15 VNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
V+ + + ++ + +++ GGKR+RP+L +ATA ML + VL A
Sbjct: 28 VDDAFDALLPVPGDTRAPLV-EAMRHAAIGGGKRVRPLLLVATATMLGVSREAAVLAGTA 86
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH +L+H +DD +RRGK + T+VL GD L + AF ++ ++
Sbjct: 87 VESIHVYSLIHDDLPCMDDDDMRRGKPTVHKAFDEATAVLAGDALHALAFDILTDSSVSS 146
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTE--------EDYLHVIKSKTAVLFSAALEVS 180
+ + LA+ + + KT L +A++E+
Sbjct: 147 DPFIQAELVRCLAQASGMSGMAGGQAMDMAADSATYDLPTITRLQQLKTGALLTASVEMG 206
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A V + R L +Y ++G+AFQ+ DD+LD+ G+ ++ GK + +D GK T ++
Sbjct: 207 AILARVPHDARGHLIAYARDIGLAFQIADDLLDHEGDEDKAGKALRKDDEQGKQTFVTLM 266
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+A + ++A L
Sbjct: 267 --------------------------------------GAEGARAQAKALVEQACGHLAH 288
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L ++ + ++R
Sbjct: 289 Y--GEDAGVLCDLARYIVER 306
>gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
Length = 305
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 70/328 (21%), Positives = 123/328 (37%), Gaps = 58/328 (17%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
V L+ + + + + +++ + +GGKRLRP L + +A + G+
Sbjct: 18 AAVEVLLRRLLDDRPLTGEIARPGRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAA 77
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-- 120
+ +A A+E +H +L+H +DD +RRG+ + T++L GD LL+ AF +
Sbjct: 78 LRVAAALECVHCYSLIHDDLPAMDDDDMRRGQPTVHRAFDEATAILAGDALLTLAFDIIA 137
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E ++ L G ++ E + + KT L
Sbjct: 138 GEATVLPAERRAALVLALARAAGAGGMVGGQTLDLEAERTPPDEAGIIRLQAMKTGALIR 197
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A E ++IAG R+ L +G +G+AFQL DD+LD + ++MGK G+D GK
Sbjct: 198 FACEAGAIIAGAPAEDRERLAEFGSAVGLAFQLADDLLDLTADASQMGKATGKDAAAGKA 257
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TL + + + ++A
Sbjct: 258 TLVALHGTNW--------------------------------------ARSQLHGLVEQA 279
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L +++ L F R N
Sbjct: 280 HALLEPYGENAA--LLKAAATFVATRNN 305
>gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118]
Length = 291
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 92/245 (37%), Gaps = 13/245 (5%)
Query: 5 EDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERSLEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDF 112
D A A+E IH +L+HDD+ + +
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL+ A S A + A + G+ + + + +D + KT L
Sbjct: 123 LLATASASAELRVSWMQSLATAAGAAGMCGGQALDIDATG-QLQSLQDLQRMHALKTGAL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA+ + +L + +Q L + LG+AFQ+ DD+LD ++GK G+D
Sbjct: 182 IRAAVRMGALTGCAAAADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQA 241
Query: 233 KPTLP 237
K T P
Sbjct: 242 KSTYP 246
>gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis]
gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 109/282 (38%), Gaps = 5/282 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+ + E++ + KY++ GK++R L A + L+ D ++A ++ +H ++L
Sbjct: 6 KENLKIRREILLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHNSSL 65
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DD+ D+S LRRG A ++G ++ +++ +A V+ E + +
Sbjct: 66 LIDDIEDNSKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFTEELLE 125
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ + + E+ + K V+ + + + +
Sbjct: 126 LHRGQGMDIYWRDSYTCPTEEEYRDMVRKKTGGL---FRVAVRLMQLFSENKSDFLPLLD 182
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
LG+ FQ+ DD + E + K+ ED GK + P+I + + +
Sbjct: 183 MLGLYFQIRDDYANLLSEEYKENKSFCEDLTEGKFSFPIIHGIR--GDPSSKKIMNILKQ 240
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ K +++ + T A +R L
Sbjct: 241 RTEDIDMKKYCVDCLKQVGSFSYTREVLRELETSALQLIRNL 282
>gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+K KD+ ++ + S ++ ++Y + +GGKRLRP L LAT
Sbjct: 3 LKSFRHSIDKDL---EAALIAHLGQDSQDSLLAS-MRYSLENGGKRLRPSLLLATLASFN 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
Y + ACA+E+IHT +L+HDD+ +D+ RRG++ + T++L GD LL+
Sbjct: 59 YDYHLGLAPACAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTL 118
Query: 117 AFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
AF ++ +++ + + + S+ +T E+ ++ K
Sbjct: 119 AFEVLSQSQEETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKK 178
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A+ ++LI + + + +L SY + GIA+Q+ +D+ + E GK D
Sbjct: 179 TGALIHFAIMAAALIMDLDQAAQDSLASYAHHFGIAYQIQNDLQEVMWNDEERGKKSHGD 238
Query: 229 FRNGKPTLP 237
+ K T P
Sbjct: 239 QDSDKNTYP 247
>gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus]
gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus]
gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + T KA + + +L++
Sbjct: 246 YCVHYLENVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIK 289
>gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis]
gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis]
Length = 339
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/306 (17%), Positives = 114/306 (37%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
ME++N ++ K + E++ Y+ GK+ R L LA L +
Sbjct: 1 MEELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLGH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + + L G+ ++ + E ++ + +
Sbjct: 121 PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFSA 180
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L + G+ FQ+ DD + + K+ ED GK PVI A + +
Sbjct: 181 NKEDYSKLTAIL---GLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--S 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T + +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCISLLEKLGSFQYTRKVLETLDAEARAEVMRLGSNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + T KA + + +L++
Sbjct: 246 YCVHYLENVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIK 289
>gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 69/329 (20%), Positives = 133/329 (40%), Gaps = 50/329 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ + + + + + + E+I + +KY + +GGKRLRP+L +L
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEK 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+N + A AIE IH+ +L+HDD+ D+ RRGK+ +G +L+GD LL+ AF
Sbjct: 63 ENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
++ + E + + + + + + + +KT
Sbjct: 123 ILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGK 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +E++ +I ++ L + +G+AFQ+ DD+LD G+ + +GK +G D
Sbjct: 183 LMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T P ++ + E + +A I+ E + +
Sbjct: 243 GKSTYPALIGM--------------AESKALLKETIAEAKTIVAEKFGVEKS-------- 280
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L+E+ D+ R
Sbjct: 281 ----------------NILLELADYIGNR 293
>gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
gracilis RM3268]
gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
gracilis RM3268]
Length = 330
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 37/310 (11%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
S GK+LR L L A + + + L IE I A+LLHDDV+D+S++RRGK +
Sbjct: 28 LSPGKKLRSKLLLNIAR----KDEKSLRLCAIIELIQAASLLHDDVIDESSVRRGKPSIN 83
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIET----------------------------KSQEAL 130
+G++ +V++GD L S+A+ + + + +A
Sbjct: 84 ATYGSKNAVMLGDILYSKAYFELSKFESRIAAALSLAVTKLAVGELMDVSLSDDFNDDAS 143
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ L ++ + L + I + + ++ +S
Sbjct: 144 KYLQMIYLKTSALIEEVARCGAFLKFGSAENRGEISDMSGKKNEGEIPSAAKDHNKISSA 203
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
YG NLG+AFQ++DD+LD +GK DF GK TLP I + ++
Sbjct: 204 SAKFGKYGKNLGLAFQIIDDILDVTQSSEALGKPSLSDFAEGKTTLPYIYLYGNLDDAQR 263
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+S ++ + + E+ + A +YGQKA +++ + L
Sbjct: 264 QKLRSFFKK-QLCESEISWIKAKLSEHGIIERCINEARAYGQKALEAVAEFKN----DKL 318
Query: 311 MEVVDFCLQR 320
++V + R
Sbjct: 319 EQIVRDMIDR 328
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 13/248 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+E + +++ + I + E I + Y + +GGKR+RP+L AT
Sbjct: 5 EVERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL+ AF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E + S+ ++ E ++ + KT
Sbjct: 125 QVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ ++ +L+A N + L + +LG+AFQ+ DD+LD G +MGK +G D
Sbjct: 185 GKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDM 244
Query: 230 RNGKPTLP 237
N K T P
Sbjct: 245 ENKKVTYP 252
>gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium
HF186_25m_30B18]
gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium
HF186_25m_13D19]
Length = 356
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 70/303 (23%), Positives = 123/303 (40%), Gaps = 15/303 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +E V + + + + ++ + +GGK++R + L A L
Sbjct: 33 LERGLEAVRDH---ALQTAHAHLNEPLRSMVVQHLQTGGKQVRARIVLEAARALGEEPMT 89
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCM 120
V +A A E +H ATL+HDD+ D +RRG+ A + G ++ VGD +L + A
Sbjct: 90 LVPIAAACELLHNATLVHDDLQDGDTVRRGEPAVWVRHGEAQAINVGDAMLMLPTLALEQ 149
Query: 121 VIETKSQEALEALSLVAC--TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ S A + A G+ +L L + YL K+ FS +E
Sbjct: 150 MLLMPSVRWYIATAFTRRATETACGQALELELLGRGWLGRGPYLRAALGKSGPFFSLPIE 209
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++L AG Q + +A+ + LG FQ+ DDVLD G+ G+ + L V
Sbjct: 210 TAALAAGRQPTRARAIGDALLALGALFQIRDDVLDLFGD-KGRGQRGNDLREGKVSALTV 268
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK--AKD 296
+R E+ + + +++ + + + AL DT A + A
Sbjct: 269 THLERRPEDTEELVALLKRDRDETHDDDVAEWSERLVLSGALEDTCAWADELLRDLVASA 328
Query: 297 SLR 299
L
Sbjct: 329 ELA 331
>gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby]
gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby]
gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+L I I + Y +FSGGKR+RP+L +++ ++A A+E H
Sbjct: 18 EQLLNEIIIPAPKIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHC 77
Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ S A
Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVLTRLSPLLPAAQV 137
Query: 135 LVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLI 183
+ + G+ LS L VTEE + KT L A V +
Sbjct: 138 VAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFEMVLAAQ 197
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q
Sbjct: 198 NEISEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQ 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ E + Q A DSLR
Sbjct: 258 QL--------------------------------------EEEIAVHYQIAMDSLRLFGS 279
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+ +L+E+ R N
Sbjct: 280 KAA--ALIELTKQLQNRSN 296
>gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1]
gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1]
Length = 289
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + S+VE I ++ Y + +GGKRLRP+L LAT L + + + +AC I
Sbjct: 15 IDDYLAKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSKSAK 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
G + + L + G ++Q+ DD++D E GK +D GK
Sbjct: 195 GASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGKATHKDQAEGKNNTL 247
>gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 362
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 68/314 (21%), Positives = 120/314 (38%), Gaps = 32/314 (10%)
Query: 40 SGGKRLRPMLTLATALMLEYR----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+GGKRLR +L A GD VL A+E A L+HDDV+D S +RRG
Sbjct: 48 TGGKRLRALLCCAAWEAAGGAVPSAGDPVVLAGAALELFQAAALVHDDVMDASDVRRGAP 107
Query: 96 AARLVWGNQT-----------------------SVLVGDFLLSQAFCMVIETKSQEALEA 132
AA + +++ ++A +V ++ A E
Sbjct: 108 AAHRRLAAEHRAAGLLGDADRFGEAGAILLGDLLLMLSSSTFARAVRLVPLERAARADEV 167
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK----SKTAVLFSAALEVSSLIAGVQN 188
+ ++ + G+ + + D + L + + +AG +
Sbjct: 168 YAHMSGEVTLGQYLDVYAALAPWDPAGDADRARRVIEAKAARYSVEHPLVLGAALAGADD 227
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
V G+ +G AFQL DDVL G+ GK G+D R GK T+ + L +
Sbjct: 228 DVLAWCSRVGLPVGTAFQLRDDVLGVFGDPAVTGKPAGDDLREGKRTVLLALGLELADDA 287
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WK 307
+ + +S + D + + + + I+ + AL E + Q+ +L P
Sbjct: 288 DADDLRSAVGDQGLDADGVARLRGILTSSGALHAVEEMIEARAQEGLAALADPPPGVGST 347
Query: 308 KSLMEVVDFCLQRL 321
+ L ++ + R+
Sbjct: 348 ERLERLLRSAVARV 361
>gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
Length = 288
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPRINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
SJ-7A-US]
gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
SJ-7A-US]
gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
Length = 288
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 122/310 (39%), Gaps = 47/310 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + K ++ + + + S+ + ++ Y + +GGKRLRP+L LAT + L
Sbjct: 1 MTEFTNFYKKYQPIIDHYLEQHLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +AC IE IHT +L+HDD+ +D+ RRG + + WG ++L GD LL
Sbjct: 61 KEINEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLP 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAV 171
+ K+ E + ++ + + ++ + + KT
Sbjct: 121 MGLEWIASAKNAEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFINRMEWLKTGC 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++E++++ A + +R+ L + N G A+Q+ DD++D E GK +D
Sbjct: 181 LIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDVIQTSQEAGKATHKDEEE 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK +L + +
Sbjct: 241 GKNNTLTLL--------------------------------------GIDQSREELKELI 262
Query: 292 QKAKDSLRCL 301
AK +L L
Sbjct: 263 SAAKSNLDGL 272
>gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis
familiaris]
Length = 300
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + T KA + + +L++
Sbjct: 246 YCVHYLENVGSFEYTRSTLKELESKAYKQIDARGGNPELVALIK 289
>gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10]
Length = 289
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 66/297 (22%), Positives = 120/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + S+V+ I ++ Y + +GGKRLRP+L LAT L + D + +AC I
Sbjct: 15 IDDYLAKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQSAQ 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L + G ++Q+ DD++D + GK +D GK +L
Sbjct: 195 KASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEKAGKATHKDKEEGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +AKD+L L
Sbjct: 251 ----------------------------------GIDQSRKELKDLIDQAKDNLHGL 273
>gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 305
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 75/328 (22%), Positives = 129/328 (39%), Gaps = 58/328 (17%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
V L+ + + + + + +++ + +GGKRLRP L + +A + G+
Sbjct: 18 AAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAA 77
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H +L+H +DD LRRG+ + T++L GD LL+ AF ++
Sbjct: 78 LRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIIA 137
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSKTAVLFS 174
+ E + + LA + E + + + KT L
Sbjct: 138 GESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRLQAMKTGALIR 197
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A E +LIAG R+ L +G +G+AFQL DD+LD G+ ++MGK G+D GK
Sbjct: 198 FACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGDASQMGKATGKDAAAGKA 257
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T ++ + A + + Q+A
Sbjct: 258 T-------------------------------------LVALHGA-NWARGQLHGLVQQA 279
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L P + L E F R +
Sbjct: 280 HALLE--PYGDDAQLLKEAATFVAARNS 305
>gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 367
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 132/324 (40%), Gaps = 21/324 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A + +
Sbjct: 43 LRAAVDRLAPPMDTVAAYHFGWIDAHGRPADGDGGKAVRPALALLSAEAAGAPAEAGIPG 102
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A +
Sbjct: 103 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTV 162
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
++ A L+ L +G+ + +S VT E+ L + +KT L + A+ + +++
Sbjct: 163 EAGRAARRLTSATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAVSIGAVLG 222
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L++YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 223 GADDRTADVLEAYGYHLGLAFQAVDDLLGIWGDPESTGKQTWSDLRQRKKSLPVVAALAA 282
Query: 245 GTKREKNFWKSTINDGK------ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
G + + D K S E ++ E T A A ++L
Sbjct: 283 GGPASERLGELLAADAKSNDFDSFSEEEFAARAALIEEAGGREWTAQEARRQHAVAIEAL 342
Query: 299 RCLP-DSSWKKSLMEVVDFCLQRL 321
+ + L + DF + R
Sbjct: 343 HGVDMPEQVRAQLTALADFVVVRK 366
>gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM
5305]
gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM
5305]
Length = 623
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 125/324 (38%), Gaps = 28/324 (8%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYR--------------GDNH 64
K S V + + + +GGKR RP +TLA D
Sbjct: 276 KKFANSPVAATERISRDWLANGGKRFRPFITLAAWDARNGGDATRKDPSSNEPLEVPDAV 335
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A AIE H A+L+HDD+ DD R G+ G ++ VGD+L+ + ++ E
Sbjct: 336 KKAAIAIEAFHKASLVHDDIQDDDEYRYGEETLHRQHGVGIAINVGDYLIGMGYRLLAEC 395
Query: 125 K---------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+L+ + +G + + + +L++T D + + KT+ F A
Sbjct: 396 HVADDPMAVSDIVQRMSLAHIKLCEGQGAEMEWTANPSLNLTPLDAMQIYALKTSPAFEA 455
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
AL + G + + + ++ +LG+ FQ+++D+ D+RG+ +
Sbjct: 456 ALYSGLRLGGDVSEYDEMVSTFCRHLGVGFQILNDLKDWRGDSQNKVVTGQDAIALRPTL 515
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + +++K + + L+ I + +A +K++
Sbjct: 516 LLAMAIQAANDEQKKTLENILKGIPESDTQRLEMLRTIFEQTDVF----NQAELLVEKSR 571
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQ 319
+ L +S SL + + F +
Sbjct: 572 ERAEALAESVQPASLQQFLYFLID 595
>gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591]
gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591]
Length = 303
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 61/339 (17%), Positives = 117/339 (34%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++++ + + + + + + GGKRLRP L +T +
Sbjct: 1 MTDFLKQLAAHHQRIDAALSHFISALPFQSSPLVAAMAHGALLGGKRLRPFLVYSTGRLF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D+ A A+E IH +L+H +DD LRRG+ + +G ++L GD L +
Sbjct: 61 AIAQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + + L + G+ L +
Sbjct: 121 LAFSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQTLERIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ ++ + L Y +G+AFQ+ DD+LD G+ GK
Sbjct: 181 HKTGALIRASVRLGALAAGERGRLALPCLDRYADAIGLAFQVQDDILDVIGDSATTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + GK T P ++ L +
Sbjct: 241 GADQQLGKSTYP----------------------------------ALL----GLEQAQR 262
Query: 286 RAYSYGQKAKDSLRCLPDS----SWKKSLMEVVDFCLQR 320
+A Q++ +L L ++ + L + ++ ++R
Sbjct: 263 KARELCQESLSALNELEETLDTPAEIAPLRALANYVVER 301
>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
Length = 302
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 74/342 (21%), Positives = 127/342 (37%), Gaps = 60/342 (17%)
Query: 1 MKML----EDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M + ++ + E++ +L + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSAIPAVKAEILKQAQERIQQDLLSALEAFSLPEPLKSAVYHAVMLGGKRVRPALCYATA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A AIE IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 ALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCM-----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
L S AF + V + ++ L+ + + G++ L +
Sbjct: 121 ILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQL 180
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
A++ +A + + I + L+ YG +G+AFQ+ DD+LD E
Sbjct: 181 ENIHRNKTGALIQAAIMMAAVTIFNGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETEV 240
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G+D + K T P ++ L
Sbjct: 241 LGKTAGKDEQVEKSTYPALM--------------------------------------GL 262
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A +A +L + L + F L R +
Sbjct: 263 EQAQLYAKQLHDQAFSALEYF--GEAAEELNTISRFLLSRKS 302
>gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 307
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 52/334 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
L + + ++N ++ +I +D + + + + Y + +GGKRLRP+LT+AT +
Sbjct: 7 KLNEFIKEWTPRINQVLESKIEQDTDQQKLFESMSYSVNAGGKRLRPLLTIATLITFNQT 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D+ + CA+E +H+ +L+HDD+ LRRGK ++G + L GD L + A
Sbjct: 67 ITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQALA 126
Query: 118 FCMVIETKSQEALEALSLVACTL------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F V++ +A + + + + ++KT
Sbjct: 127 FQWVVDNDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHELQKLDRNKTGA 186
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L S A+ ++A V ++ L ++ N G AFQ+ DD+LD G+ +GK + +D
Sbjct: 187 LISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEKAIGKPVHQDADK 246
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ L AL T RA
Sbjct: 247 NTYPNLMGLDG---------------------------------AYEALQRTVDRARHAL 273
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCL---QRLN 322
A L L++ + + +R N
Sbjct: 274 NTASHKLNI-----DTSLLLDFCSYFVIKDERHN 302
>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
Length = 314
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 4 LEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ +EK+ ++ + + +I + + Y + +GGKRLRPML T +
Sbjct: 21 MQAQMKHKVEKIEGILTEYLPRQEGFQSIIMEAMNYSLLAGGKRLRPMLMNETYRLFGGE 80
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF
Sbjct: 81 SPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAF 140
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKS-K 168
+ E E+L + + + + + ++ L I K
Sbjct: 141 ETAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDTIYELK 200
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T+ L A++ V +++ G + ++ +GIAFQ+ DD+LD +GK D
Sbjct: 201 TSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTSTKEVLGKPTHSD 260
Query: 229 FRNGKPTLPVIL 240
+N K T ++
Sbjct: 261 EKNEKTTYVTLM 272
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 34 LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKVRLVLELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ +T + ++ K KT L A+ ++++ + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKDS+ L + L+ + D
Sbjct: 257 --------VDRAKSILEET-------------IAKAKDSISSLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42]
gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
Length = 296
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 74/336 (22%), Positives = 133/336 (39%), Gaps = 57/336 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
L+ + + + + ++ E + + Y + +GGKRLRP++ LA
Sbjct: 3 NKLDAFLASRKQLIEQQL--SLYTERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAY 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + CA+E IHT +L+H +DD LRRGK V+G +VL GD LL+
Sbjct: 61 GKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLT 120
Query: 116 QAFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
++F ++ S+ L G ++ +T E+ + +
Sbjct: 121 ESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHE 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L ++ +++A + L+ + ++GI FQ+ DD+LD G ++GK +G
Sbjct: 181 RKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D N K T P +L L + +
Sbjct: 241 SDSSNEKSTYPSLLT--------------------------------------LEGAKEK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK + L S K+ L ++ D R +
Sbjct: 263 LAYHISEAKQIISGL--SLQKELLHDLCDLIAARDH 296
>gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
Length = 289
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + + + +V+ I + Y + +GGKRLRP+L LAT L + + + +AC I
Sbjct: 15 IDDYLARHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + + +
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSNSAE 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ +A+ + + ++++ + + KT L A++E++++ A
Sbjct: 135 LVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + L Y G ++Q+ DD++D E GK +D GK +L
Sbjct: 195 KATDIEQVKLIDYAKAFGRSYQIYDDLVDVVETSEEAGKATHKDQEEGKNNTLTLL---- 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + ++AKD L L
Sbjct: 251 ----------------------------------GIDKSRKELRDLIKQAKDDLHGL 273
>gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 358
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 72/337 (21%), Positives = 130/337 (38%), Gaps = 28/337 (8%)
Query: 12 MEKVNFLILKRICSDVEMIP----DVVKYLI----FSG--------GKRLRPMLTLATAL 55
+++ L+ + V + ++ + + +G GK +R L + A
Sbjct: 22 LDRCRALVRPALADAVGRLHPWPGEMAAHALGWRDTAGTPDPAASEGKGVRQALAVLGAE 81
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ G + V A A+E +H +L+HDD++D LRR + A +G +VL GD LL+
Sbjct: 82 LCGAPGVSAVPGAVAVELVHAFSLVHDDIMDGDELRRQRPAVWKSYGTGPAVLAGDGLLA 141
Query: 116 QAFCMVIETKSQEALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
A + + A+ V + + V + Y + +
Sbjct: 142 AAVQTLAQAPGALGGPAVLRLSGALTSLVRGQADDLLFADRPWTGPEAVRPDAYRSMAEH 201
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A + +L+ G ++ AL G +LG+AFQ VDD+L G+ GK +
Sbjct: 202 KTGALLGCAAALGALLGGAPDTTVTALDRAGRHLGVAFQAVDDLLGIWGDPARTGKPVHG 261
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYR 286
D R K T PV+ A + + + +A ++ T
Sbjct: 262 DLRQRKKTYPVLAALASDGPTARELAALLDSPCPPDDATVAARAADLVEAAGGRTATLAE 321
Query: 287 AYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRL 321
A+ + A+ LR L + + E++ + R
Sbjct: 322 AHHHLDAARACLRGTPLAPRAVHEV-EELLGYLAHRT 357
>gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
Length = 307
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-Y 59
L + + ++N ++ +I +D + + + + Y + +GGKRLRP+LT+AT +
Sbjct: 7 KLNEFIKEWTPRINQVLESKIEQDTDQQKLFESMSYSVNAGGKRLRPLLTIATLITFNQA 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D+ + CA+E +H+ +L+HDD+ LRRGK ++G + L GD L + A
Sbjct: 67 ITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQALA 126
Query: 118 FCMVIETKSQEALEALSLVACTL------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F V++ +A + + + + ++KT
Sbjct: 127 FQWVVDNDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHELQKLDRNKTGA 186
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L S A+ ++A V ++ L ++ N G AFQ+ DD+LD G+ +GK + +D
Sbjct: 187 LISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEKAIGKPVHQDADK 246
Query: 232 GKPTLPV 238
+
Sbjct: 247 NTYPNLM 253
>gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
Length = 296
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 18/311 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+++V + + + + + ++ + + GK LR L L A + +
Sbjct: 2 LDQVKMRMEQIVEDLQDKRVLEIYRSIPM--GKMLRSKLILNIA-----PVPEAIHTSAI 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE IH A+LLHDDV+DD+ RRG + V GN+ ++++GD L ++AF + + +
Sbjct: 55 IELIHMASLLHDDVIDDADTRRGNPSVNAVLGNKPAIMIGDILYAKAF-YELSSLPKTLA 113
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S L+ GEL+ + LSK+ E Y+ +I KTA L A+ ++ ++G
Sbjct: 114 QTISQAVALLSLGELKDVELSKSFQPDIEAYMDMIYKKTASLIEASAISAAYLSGKDLK- 172
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ YG LG+AFQ+VDD+LD + +GK + DF GK TLP I ++ EK
Sbjct: 173 --SYGEYGKKLGLAFQIVDDILDIISDEETLGKPVLNDFYEGKTTLPYIYLYESLEDLEK 230
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+S + E + A+ ++ A G +A + P K L
Sbjct: 231 AKLESLYKKR-LEPEEKEWLLDRFETTGAIQRSKEFARKLGHEAMQVI---PKEEVK--L 284
Query: 311 MEVVDFCLQRL 321
+++ ++R
Sbjct: 285 QAIMEALIERT 295
>gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
Length = 301
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 12 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 71
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 72 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 131
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 132 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 188
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 189 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 246
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 247 YCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 290
>gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Pan troglodytes]
gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Pan troglodytes]
gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan
troglodytes]
gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Pan troglodytes]
gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens]
gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens]
gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens]
gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens]
gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens]
gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens]
gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
Length = 300
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 289
>gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 70/336 (20%), Positives = 126/336 (37%), Gaps = 55/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + K + + ++ + + + + + +GGKRLRPML T M
Sbjct: 1 MNEFDQELKKRISHIEKILDHYLPKPEGFQKTVLKAMNTTVKAGGKRLRPMLMEETYKMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ AIE IHT +L+HDD+ D+ RRG+ +V+G ++L GD LL+
Sbjct: 61 GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVI 165
AF + E + + + + ++ E + +
Sbjct: 121 YAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSMEQIMFIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+KT+ L A + + +++AG +A++ G +G+AFQ+ DD+LD G+ +GK +
Sbjct: 181 HNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITGQEEVIGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T I + L
Sbjct: 241 GSDEKNQKTTYVSI--------------------------------------KGLEQAGK 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A + LR S L + ++ + R
Sbjct: 263 DVERISLEAVEILRTYDTSDG--YLTGLAEYLIHRT 296
>gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 376
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 72/358 (20%), Positives = 125/358 (34%), Gaps = 51/358 (14%)
Query: 14 KVNFLILKRICSDV------EMIPDVVKYLIFS----------GGKRLRPMLTLATALML 57
+ I + + V I ++ + + GGKRLR +LTL +L
Sbjct: 19 AIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLDAYDVL 78
Query: 58 EYRGD---------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
D + ACAIE TA L+HDD++DDS LRRGK +A +
Sbjct: 79 AGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLRRGKPSAHCALTSFAGAR 138
Query: 109 VGDFLL------SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
L A + + + + + LD+ E
Sbjct: 139 SIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLSMQHDVEVGQVLDLAIERMP 198
Query: 163 --------------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
K+ + + + + + G+ LG AFQL
Sbjct: 199 LDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAIGLPLGQAFQLA 258
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD+LD G GK +G D R GK T+ + A GT ++ + S +
Sbjct: 259 DDLLDVTGSSRSTGKPVGGDIREGKRTVLLADAMMLGTAAQRVQLQQLYEQPFRSDAQVH 318
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLME-----VVDFCLQR 320
+ + + A+ + R + ++S+ + ++ + +SL + + DF +R
Sbjct: 319 ETIALFHDTGAIEHSHERIAKLWSQTQESIEAMGLTAAQSQSLRKACERFLPDFTAER 376
>gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis AD011]
gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis AD011]
gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis V9]
Length = 366
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 72/358 (20%), Positives = 125/358 (34%), Gaps = 51/358 (14%)
Query: 14 KVNFLILKRICSDV------EMIPDVVKYLIFS----------GGKRLRPMLTLATALML 57
+ I + + V I ++ + + GGKRLR +LTL +L
Sbjct: 9 AIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLDAYDVL 68
Query: 58 EYRGD---------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
D + ACAIE TA L+HDD++DDS LRRGK +A +
Sbjct: 69 AGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLRRGKPSAHCALTSFAGAR 128
Query: 109 VGDFLL------SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
L A + + + + + LD+ E
Sbjct: 129 SIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLSMQHDVEVGQVLDLAIERMP 188
Query: 163 --------------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
K+ + + + + + G+ LG AFQL
Sbjct: 189 LDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAIGLPLGQAFQLA 248
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD+LD G GK +G D R GK T+ + A GT ++ + S +
Sbjct: 249 DDLLDVTGSSRSTGKPVGGDIREGKRTVLLADAMMLGTAAQRVQLQQLYEQPFRSDAQVH 308
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLME-----VVDFCLQR 320
+ + + A+ + R + ++S+ + ++ + +SL + + DF +R
Sbjct: 309 ETIALFHDTGAIEHSHERIAKLWSQTQESIEAMGLTAAQSQSLRKACERFLPDFTAER 366
>gi|50309979|ref|XP_455003.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644138|emb|CAH00090.1| KLLA0E23299p [Kluyveromyces lactis]
Length = 315
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 60/307 (19%), Positives = 117/307 (38%), Gaps = 5/307 (1%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
M+ ++ +I + + + +YL+ GKR+R +L + E + ++ I
Sbjct: 5 MDSLDQIIYNDTLQTTKPVTEPFEYLLKQQGKRVRTLLIEEFGKLYEVPKPSIDAVSAFI 64
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF--LLSQAFCMVIETKSQEA 129
+ +HTA+LL DD+ D++ LRRG VAA +G T++ +S + + E +
Sbjct: 65 DELHTASLLIDDIEDNAELRRGHVAAHKKYGIWTTLNSAQCAVYVSISKLLAKEHEPSLP 124
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ + + +Y + K+KT LF + + ++ + +
Sbjct: 125 SIINDELIRLHVGQGQDIYWRDDGIVPSVNEYYEMAKNKTGGLFRLMVRLLHALSKKELA 184
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ L GI +Q+ DD L+ + K +D GK + P+I A
Sbjct: 185 QKYDLIPLANAAGILYQIRDDYLNLFSKTMFEQKGFADDLTEGKFSFPIIHAIASSRNEG 244
Query: 250 KNFWKSTIN--DGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
N + +K + + ++ T + QK L SS
Sbjct: 245 DNDDYVLKTVLSRPSEIRTKEKLLSYLEHQTKSGEYTRQVIQTLAQKVTTELVPKELSSV 304
Query: 307 KKSLMEV 313
K L ++
Sbjct: 305 KDILSKL 311
>gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
27-2-CHN]
gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
115-3-CHN]
gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
27-2-CHN]
gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
115-3-CHN]
gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
Length = 288
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 9/246 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + K ++ + + + S+ + ++ Y + +GGKRLRP+L LAT + L
Sbjct: 1 MTDFTNFYQKYQPIIDHYLEQHLSSEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +AC IE IHT +L+HDD+ +D+ RRG + + WG ++L GD LL
Sbjct: 61 KEITEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLP 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAV 171
+ ++ E + ++ + + + + + KT
Sbjct: 121 MGLEWIASAENAEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNFINRMEWLKTGC 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++E++++ A + R+ L + N G A+Q+ DD++D E GK +D
Sbjct: 181 LIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDVVQTSQEAGKATHKDEEE 240
Query: 232 GKPTLP 237
GK
Sbjct: 241 GKNNTL 246
>gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
Length = 325
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ + V A GE++Q S + D+T +DYL KTA L +A+ +++ +GV S
Sbjct: 138 MICMDEVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTS 197
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q +
Sbjct: 198 ICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPELR 257
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ I+ ++L A ++ + + A G A +L+CLP S ++ +
Sbjct: 258 E-----IIDSEFSETDSLAAAIELVHRSGGIRRAHELAREKGDMAIQNLQCLPRSDFRST 312
Query: 310 LMEVVDFCLQRL 321
L +V + L+R+
Sbjct: 313 LESMVKYNLERI 324
>gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V
Sbjct: 6 GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 65
Query: 101 WGNQTSVLVGDFLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++L GD L + A + + ++ A L+ + L +G+ + +S V+
Sbjct: 66 HGPAQAILAGDALFALANEILLELGTLEAGRAARRLTTASRALIDGQAQDISYEHRERVS 125
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A+ + +++ G + AL+ YG +LG+AFQ VDD+L G+
Sbjct: 126 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLLGIWGD 185
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND------GKISVENLKKAF 271
GK D R K +LPV+ A + D S +
Sbjct: 186 PEATGKQTWSDLRQRKKSLPVVAALAAEGPAAERLGSLLAADAKANDFENFSEDEFAARA 245
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRL 321
++ E TE A A ++L +PD ++ L + DF + R
Sbjct: 246 ALIEEAGGRAWTEAEARRQHTVAIEALSGVGMPDH-VREQLTALADFVVVRK 296
>gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
acidophilus NCFM]
gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
acidophilus NCFM]
gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
Length = 289
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 15 VNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71
++ + K + S D + I ++ Y + +GGKRLRP+L LAT L + ++ + LAC I
Sbjct: 15 IDNYLAKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEIRLACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEGSNSSE 134
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-----VTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L + A Q + + E+ + KT L A++E++++ A
Sbjct: 135 LVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L + G ++Q+ DD++D E GK +D GK
Sbjct: 195 KASDIEQVKLVDFAKTFGRSYQIYDDLVDVVETSEEAGKATHKDEEEGKNNTL 247
>gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
Length = 288
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPQINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 13/248 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+E + +++ + I + E I + Y + +GGKR+RP+L AT
Sbjct: 5 EVERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + +ACAIE IHT +L+HDD+ LRRGK V+G ++L GD LL+ AF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 119 CMVIETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ E + S+ ++ E ++ + KT
Sbjct: 125 QVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKT 184
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ ++ +L+A N + L + +LG+AFQ+ DD+LD G +MGK +G D
Sbjct: 185 GKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDI 244
Query: 230 RNGKPTLP 237
N K T P
Sbjct: 245 ENKKVTYP 252
>gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
aurantiaca DW4/3-1]
gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
aurantiaca DW4/3-1]
gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 332
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 6/291 (2%)
Query: 28 EMIPDVVKYL-IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + + ++L + SG KR RPML + ++ V +A + E IH+A+LLHDDVVD
Sbjct: 34 DTLMEAARHLCLGSGSKRARPMLVSLFGDAVGLSSEHLVDVAVSAELIHSASLLHDDVVD 93
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
RRG+ WGN +V+ GD +LS + + + + V + +
Sbjct: 94 AGMFRRGRPTVNARWGNIVAVMSGDLILST-TLLRLAQLDERLSRSALSVVSEMTRAAIT 152
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ +++ ++ + KT LF ++ +A Q + +G +LG+AFQ
Sbjct: 153 EVEARGVMELPLPRLRYIAEGKTGSLFGWCGHAAATLAN-QPEAAKRFDGFGRHLGVAFQ 211
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD+ D G + R + + + G +R+ + + I+ +
Sbjct: 212 IADDIRDVLGTDVGKPQYADLQSRTPSMPILLAVEKDEGLRRKLKDAWAFSS---ITPDR 268
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+K+ + A+ + + A L +S L
Sbjct: 269 IKEIGASIIACGAVEQSLAQMNVEIDAALGYLGSFANSDGGAELASWARKL 319
>gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1]
gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
Length = 288
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPQINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 471
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
++ E YLH KTA L S A S++++G V + YG NLGI FQLVDD+L
Sbjct: 306 MINTAFEYYLHKTYLKTASLISMACRSSAILSGASPEVVDSCYEYGKNLGICFQLVDDML 365
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
D+ +GK D + G T PV+ A++ + I +++ A
Sbjct: 366 DFTVSSENLGKPARADLKLGIATAPVLYAWREDPSLTE-----LILRNFTQPGDVEAATK 420
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320
+ ++ + T+ A Y A +L P+S + +L + + L R
Sbjct: 421 SVIQHNGVQKTKELAEKYRDAALANLRSSFPESDARSALEFLTNTILSR 469
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L +M + ++ I S + V Y + GK++RP+L L + L
Sbjct: 46 SLVSNEMNNLAKHVMGLISSGHPTLNRVTSYYFEAEGKKVRPLLVLLISKALS 98
>gi|260789526|ref|XP_002589797.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae]
gi|229274980|gb|EEN45808.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae]
Length = 371
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 52/350 (14%), Positives = 115/350 (32%), Gaps = 43/350 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLE-- 58
L L ++ V + K + + ++ + ++ G + R +L L +
Sbjct: 29 SLRYLLSDELSNVAMHLRKLVGTKHPILKTA-RGFVYDGNNSMQTRGLLVLLVSKAAGPG 87
Query: 59 -----------------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSA-LRRGK 94
+ LA E IHTA L+H VV+
Sbjct: 88 GEWEEEEEEEGEGEDSNGRTMVSGIYRSQRSLAEITEMIHTAYLMHRGVVNLEEVTSADG 147
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAEGELRQLS 149
+ +GN+ +VL GDFLL+ A + + ++ + +E + ++ + + Q
Sbjct: 148 TVGDMSFGNKMAVLSGDFLLANACTGLAQLRNTKVVEIVSSAIADMMEGSFLLEQDNQGV 207
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLV 208
+ A ++++ +++ +YG ++ +A +L
Sbjct: 208 TFLPDKDWTIKDWTNHSFLCSGSLIAKSCQAAMMLAGHRLDIQKKAYNYGKHMALAHRLH 267
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
D+L + + T ++ R K T K + K
Sbjct: 268 ADLLPFSDSSD--------PNMPFALTSAPMVLHMEHAGRAAVTDKITQVSDKAMKVDYK 319
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ + + + A+ + Y + QKA ++ +S K +L +
Sbjct: 320 QLRLEVLKGPAVHAAKELCYDHSQKALAAVTVFQESEAKSALENMTRAVT 369
>gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
Length = 288
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPQINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAKYANSNDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens]
Length = 300
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 107/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ Q+A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + + T KA + + +L++
Sbjct: 246 YCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 289
>gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
Length = 297
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 70/336 (20%), Positives = 126/336 (37%), Gaps = 55/336 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + K + + ++ + + + + + +GGKRLRPML T M
Sbjct: 1 MNEFDQELKKRISHIEEILDHYLPKPEGFQKTVLKAMNTTVKAGGKRLRPMLMEETYKMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ AIE IHT +L+HDD+ D+ RRG+ +V+G ++L GD LL+
Sbjct: 61 GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----------KNLDVTEEDYLHVI 165
AF + E + + + + ++ E + +
Sbjct: 121 YAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSMEQIMFIH 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+KT+ L A + + +++AG +A++ G +G+AFQ+ DD+LD G+ +GK +
Sbjct: 181 HNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITGQEEVIGKPV 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D +N K T I + L
Sbjct: 241 GSDEKNQKTTYVSI--------------------------------------KGLEQAGK 262
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+A + LR S L + ++ + R
Sbjct: 263 DVERISLEAVEILRTYDTSDG--YLTGLAEYLIHRT 296
>gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
Length = 290
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 14 KVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + + + V + + ++Y + +GGKRLRPML+LA + ++ +A AI
Sbjct: 13 QIEHTLENELAKSASVAELQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYLKVASAI 72
Query: 72 EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--------- 120
E IHT +L+HDD+ LRRGK +G T++L GD L AF
Sbjct: 73 ELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTDLDQPLN 132
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ A + + G++ + K VT + + KT L + AL+
Sbjct: 133 DAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQAIHYHKTGALIAYALQAG 192
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+++A ++ L +GM G+AFQ+ DD+ DY
Sbjct: 193 AIMANANEDIQNILHDFGMAYGLAFQIKDDIDDY 226
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 53/307 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + + + Y + +GGKR+RP+L AT L + A A+E IHT +L+HDD+
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 87 D--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC------ 138
LRRGK V+G T++L GD LL+ +F ++ T A + + LV+
Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAEKLIRLVSLLAKSAG 150
Query: 139 -TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
G ++ ++ E+ ++ K+KT L + ++ ++++A L+ Y
Sbjct: 151 PEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEEY 210
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
++G+AFQ+ DD+LD G ++GK +G D K T P +L
Sbjct: 211 AFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLT---------------- 254
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVD 315
L + + ++ QK K +L L + L+E+ D
Sbjct: 255 ----------------------LEGAKEKLRNHLQKGKSALAASDLDNG----LLVEIAD 288
Query: 316 FCLQRLN 322
R +
Sbjct: 289 MIASRDH 295
>gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
Length = 293
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 69/328 (21%), Positives = 114/328 (34%), Gaps = 48/328 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ ++ + R+ + + ++Y + GGK LR L L +A +
Sbjct: 8 MQGFASALKASQSMISAHLENRLAGEDN-LHQAMRYALK-GGKMLRGFLVLESARLHGVS 65
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE +H +L H +DD LRRG+ W +VL GD L AF
Sbjct: 66 QKVALDAALAIECLHAYSLAHDDLPCMDDDDLRRGQPTLHRKWDEAMAVLAGDSLQCFAF 125
Query: 119 CMVIETKSQEALEALSLVACTLAEGELR---QLSLSKNLDVTEEDYLHVIK-SKTAVLFS 174
++ +L A + Q+ L I +
Sbjct: 126 ELLSNPDMGPNALSLIRDLAKSAGKDGMVSGQMLDIAAETAETPLTLEQISLLQARKTGC 185
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+S A + + L+ Y LG+AFQ+ DD+LD G+V ++GK + +D GK
Sbjct: 186 LIEWSASAGAVLAGADSTPLRQYATALGLAFQIADDILDVEGDVQKVGKAVRKDANAGKA 245
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T +L L + RA + ++A
Sbjct: 246 TFVSLL--------------------------------------GLDTAKTRARTLCEEA 267
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L P + L E F + R +
Sbjct: 268 CAALA--PYGEQGECLKEAARFVISRDS 293
>gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 452
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 3/173 (1%)
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ +I + SS + + +A +G +LG+AFQ+VD
Sbjct: 283 FDFYMRKNYLKTASLIAKTCRAAVILSSSSSSPPSPQTQELIEASYQFGKHLGLAFQIVD 342
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+LDY G +E+GK + K+ + + +L
Sbjct: 343 DILDYTGSEDELGKTGNGSDLKA---GLITGPGLFAWKQFDRTFGELVVRKFCRPGDLDL 399
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A ++ ++ A+ + A + Q L DS K L + D L R +
Sbjct: 400 AKEMVHKSDAIRSSYQLASHHIQLCLSQLNSFNDSDAKAGLQRLCDLVLNRNH 452
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALM 56
+L ++ + I + SD + + KY + S GK LRP++ L +
Sbjct: 52 ELLANELSHLKQNIKALVGSDHLRLNSIAKYYLASAHQGKHLRPLVVLLISQA 104
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/343 (21%), Positives = 129/343 (37%), Gaps = 61/343 (17%)
Query: 1 MKMLE----DLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M + D+ + +++ +L + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSSISPVNADVLKQAQQRIQQDLLTALAAFSIPEPLKAAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LM-LEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + A A+E IH +L HDD +D+ LRRG+ +V+G T++L GD
Sbjct: 61 SLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQEALEALS------------LVACTLAEGELRQLSLSKNLDVTEE 159
L S AF ++ E + + + G++ L E
Sbjct: 121 ILQSMAFEILASRLFDEQGQGTDAAIVLKQVQILATASSKMVAGQVLDLQAEGKQVDQTE 180
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
A++ +A + + + + L+ +G +G+AFQ+ DD+LD
Sbjct: 181 LENIHRNKTGALIQAAIMMGAVTVFAGTDPAIPKLRQFGQTIGLAFQVQDDILDITASTE 240
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+GK G+D + K T P ++
Sbjct: 241 TLGKTAGKDEQVQKSTYPALM--------------------------------------G 262
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A + +A D+L D + + L + F L R +
Sbjct: 263 LEQAKTYAQTLHDQAFDALAYFGDQA--QELTAISHFLLARKS 303
>gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814]
gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814]
Length = 303
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 125/319 (39%), Gaps = 52/319 (16%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
++ I I + +++ +++ +GGKRLRP +T+ + + + + A A+E +
Sbjct: 26 LDKFIPSAIGPEAQLMR-AMRHGALAGGKRLRPFITIEVGRLFDAPEKSLLRAASALECV 84
Query: 75 HTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
H +L+H +DD LRRG + T+VL GD L + AF ++ T++
Sbjct: 85 HAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGDALQALAFEILANTETHGDAGV 144
Query: 133 LSLVA---------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + G++ ++ S + + + KT L S A E ++I
Sbjct: 145 RCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILARMQRMKTGALISCAAEFGAII 204
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G QAL + +LG+A+Q+ DD+LD +G+ +GK + +D GK
Sbjct: 205 GGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGDEAVLGKAVSKDKDAGKQNF------- 257
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ E R +AK L
Sbjct: 258 ---------------------------VSLLGE----ESAISRIEMLADQAKQHLSVF-- 284
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+L + VDF L R +
Sbjct: 285 GGRATTLTQTVDFVLDRRH 303
>gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519]
gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii]
Length = 311
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 12/302 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIE 72
+ N +++ + I + YL S GK LR L A ++ + LA AIE
Sbjct: 10 EFNNKLVEVLRKTPPSIRECTSYLSKSLGKNLRGNCILIVASDENQFVHEDAINLAVAIE 69
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--MVIETKSQEAL 130
H ATL+HDD++DDS RRG + + + +T+V+ GD++L+ A + ++ K +
Sbjct: 70 LFHLATLVHDDIIDDSPKRRGMDSLQSRFDKKTAVICGDYILAMAIELALKVDIKDEYKK 129
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ A ++ GEL Q + N +++ + YL +I+ KTA LF AA +++ G S
Sbjct: 130 YSLANYAKSVCLGELMQDTNLFNYNLSLKRYLTIIRGKTAALFEAAFVSGAIVLGEPKSN 189
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
K+ G +G+ FQ+ DD +DY E K + D G TLP+I A ++ +
Sbjct: 190 VDLYKNIGRYIGMIFQMSDDCMDYELTQAESNKPVLSDIAKGVITLPLIYAMKKNETIRE 249
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + + + T+ + Y K+ L L SS K ++
Sbjct: 250 KLEQGY---------DKNILAREIINFGGVEFTKAFSDRYYDKSIVCLDKLEISSEKYTM 300
Query: 311 ME 312
++
Sbjct: 301 IK 302
>gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 379
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 15/276 (5%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R L + A G V A A+E IH +LLHDD++D RR + + +
Sbjct: 83 GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDIMDGDETRRRRASVWKAY 142
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + E+ A+ ++ L + Q +
Sbjct: 143 GTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQLSGALGDLVRGQAEDLLFESRPWTGP 202
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + + KT L A + + +AG V AL G ++G+AFQ VDD+L
Sbjct: 203 DAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRHVGVAFQAVDDLLG 262
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN------- 266
G+ GK + D R K TLPV+ A + ++ +
Sbjct: 263 IWGDPRVTGKPVHGDLRRKKKTLPVLAALAADGPATRELAALLTDNPDADAPDSSPDDAT 322
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ +A ++ E T A+ + A+ L +P
Sbjct: 323 VHRAAELVEEAGGRAATLAEAHHHLDAARAQLAAVP 358
>gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans]
gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans]
Length = 470
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
++G NLGI FQLVDD+LD+ E+GK G D + G T PV+ A++
Sbjct: 346 CYNFGKNLGICFQLVDDMLDFTISAKELGKPAGADLQLGIATAPVLYAWKEDHSLGP--- 402
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLME 312
I ++++ + + + T AY Y +A +L LP+S + +L
Sbjct: 403 --LIQRNFSLPGDVERTAEAVAKYEGVKKTRELAYEYRDRALANLRAALPESDARSALEF 460
Query: 313 VVDFCLQR 320
+ + L R
Sbjct: 461 LTNSILTR 468
Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
L K+M + I+ + S + V Y + GK++RPML L + L
Sbjct: 46 SLVSKEMNTLAKNIVALMGSGHPTLNRVTGYYFEAEGKKVRPMLVLLLSRAL 97
>gi|91084147|ref|XP_970126.1| PREDICTED: similar to candidate tumor suppressor protein [Tribolium
castaneum]
gi|270008055|gb|EFA04503.1| hypothetical protein TcasGA2_TC014811 [Tribolium castaneum]
Length = 413
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/351 (13%), Positives = 114/351 (32%), Gaps = 45/351 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S+ ++ K L+++G G ++ L +
Sbjct: 63 SLRWLLSDEIANVALHLRKLVGSNHPLLKTA-KNLLYNGKNNMQAWG-----LIVLLVSK 116
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ D + LA E I T+ L+H +V+ + +++
Sbjct: 117 AAGHSSDIPDLEQDKAAGVLHSQRALAEVTEMIRTSHLVHKGLVNLQPSAATDASGDMMF 176
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
GN+ ++L GD+LLS + + ++Q+ +E +S LAE E +N + +
Sbjct: 177 GNKIALLSGDYLLSNSCTELANLRNQDLVELMSSAVRDLAEAEFVGPRDKQNNPLPAKPR 236
Query: 162 LHVIKSKTAVLFSAAL-------------EVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
+++ K + + + + ++ + G +L
Sbjct: 237 SDIVEYKQFTDKTLEPLVVSEALGNARAEWTLRHVLNAGSLLGKSCQGTLKLAGHPLELQ 296
Query: 209 DD-----VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+ + + NG +L + + +
Sbjct: 297 EQGYLFGKHLALAWQACLDREPFLPGTNGPFSLVCAPVMFTLQDDPSLYEEIEKGQETVD 356
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + + L T+ + A + L LP S + +L ++
Sbjct: 357 DVDYETVRKAVLAGPGLDLTKKLQKEHSTAALEVLNQLPASDARTALANII 407
>gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
Length = 316
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 70/319 (21%), Positives = 118/319 (36%), Gaps = 54/319 (16%)
Query: 18 LILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
L+ +R+ + E + +++ + +GGKRLRP L + +A + GD + +A A+E
Sbjct: 38 LLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGKGGDAVLRVAAALEC 97
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
IH +L+H +DD LRRG+ + ++L GD LL+ AF +V ++
Sbjct: 98 IHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIVSSDETDLDPA 157
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLI 183
+ LA + + KT L A E ++I
Sbjct: 158 IRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGIITLQAMKTGALIRFACEAGAII 217
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A R+ + +G +G+AFQL DD+LD + MGK G+D GK TL +
Sbjct: 218 ANASTEDRERMAEFGSAIGLAFQLADDLLDVTADAEAMGKATGKDAAAGKATLVSLH--- 274
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ T + +A+ L
Sbjct: 275 -----------------------------------GVDWTRKQLSGLVAQAESLLAPF-- 297
Query: 304 SSWKKSLMEVVDFCLQRLN 322
L + F +R +
Sbjct: 298 GKDADILKQAARFIAERQS 316
>gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 121/324 (37%), Gaps = 54/324 (16%)
Query: 13 EKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN I ++ + + ++Y GGKRLRP L AT ML A
Sbjct: 12 QRVNAAIQGFVSQLPFQSTPLVNAIEYGALLGGKRLRPFLVYATGNMLHADDAALDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + +G ++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEDAAILAGDALQTLAFSILADAPMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + G+ L+ +E A++ SA
Sbjct: 132 GVTAESRVAMLSELAQASGVAGMCGGQALDLAAEGKRVTLDELEQIHRHKTGALIRSAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + AL + +G+AFQ+ DD+LD G+ +GK G D + GK T P
Sbjct: 192 LGALSAGAPGRAALPALDRFADAIGLAFQVQDDILDVIGDTVVLGKQQGADQQLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + +A+ Q++ ++
Sbjct: 252 ALM--------------------------------------GLENARLKAWDLYQESLNA 273
Query: 298 LRCL-PDSSWKKSLMEVVDFCLQR 320
L L S +L + F ++R
Sbjct: 274 LETLAAQSYNTTALRALASFIIER 297
>gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614]
gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614]
Length = 301
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 115/326 (35%), Gaps = 58/326 (17%)
Query: 15 VNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
V + + + +++ +GGKRLRP+L + TA + D +
Sbjct: 16 VEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVMETANLFGRADDGVLQ 75
Query: 67 LACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
ACA+E +H +L+H +DD LRRG+ + T++L GD LL+ AF ++
Sbjct: 76 AACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILAGDALLTLAFDVITGE 135
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSKTAVLFSAA 176
++ LA + E ++ + KT L A
Sbjct: 136 AVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEIRQLQSMKTGALLRYA 195
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+++A + L +G +G+AFQL DD+LD MGK G+D GK TL
Sbjct: 196 CRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVEASAETMGKATGKDAEAGKATL 255
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ V T ++A+
Sbjct: 256 VGLW--------------------------------------GTVRTRDELGHLVREAET 277
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
L P S L + F + R N
Sbjct: 278 LLA--PYGSRAAILSALARFIVDRTN 301
>gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12]
gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12]
Length = 291
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/321 (19%), Positives = 113/321 (35%), Gaps = 51/321 (15%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + + + ++Y + SGGKR+RP+L A + + A
Sbjct: 11 QRTDSYLERTLSIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF + + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPAD 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSS 181
+L L T A G + K+ L AA+ + +
Sbjct: 131 ASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 191 LAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTTGKDAIQQKSTFP---- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ A + A +
Sbjct: 247 ------------------------------ALLSVEGAKCYLQELAERLYTQLH------ 270
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P L + ++R +
Sbjct: 271 PYGERAAPLTALARLAVERAH 291
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 57/336 (16%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
L+ + + + + ++ E + + Y + +GGKRLRP++ LA
Sbjct: 3 NKLDAFLASRKQMIEQQL--SLYTERLDMPESLKKSMLYSLEAGGKRLRPLVVLAVLNAY 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + CA+E IHT +L+H +DD LRRGK V+G +VL GD LL+
Sbjct: 61 GKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLT 120
Query: 116 QAFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
++F ++ S+E L G ++ VT ++ + +
Sbjct: 121 ESFKLITSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKQVTLKELESIHE 180
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KTA L ++ +++A + L+ + ++GI FQ+ DD+LD G ++GK +G
Sbjct: 181 RKTAKLLGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVG 240
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D N K T P +L L + +
Sbjct: 241 SDTTNEKSTYPSLLT--------------------------------------LEGAKEK 262
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK + L S K+ L ++ D R +
Sbjct: 263 LAHHISEAKQIVSGL--SLEKELLHDLCDLIAARDH 296
>gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
43243]
gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
43243]
Length = 307
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/340 (18%), Positives = 118/340 (34%), Gaps = 61/340 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+D+ E +N +I + ++ M + + Y + +GGKR+RP++ +
Sbjct: 9 QFKDMLNNKAEAINDIIKGFLPAEDTMSCEVEKAMNYSVMAGGKRIRPLIMSEAYKLCGG 68
Query: 60 RGDNHVLLACAI----EFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
+ + EFIHT +L+HDD+ RRG++ +G +L GD L
Sbjct: 69 SEECAAQVLHPFMAALEFIHTYSLVHDDLPAMDNDMYRRGQLTTHAAFGEDMGILAGDAL 128
Query: 114 LSQAFCMVIETKSQEALEALSLVAC-----------TLAEGELRQLSLSKNLDVTEEDYL 162
L+ A+ ++ G + +
Sbjct: 129 LNYAYETMLRAACDMTDTYRERSIRAASVIAGKAGIYGMVGGQTLDVKLTGMPMNAGQLD 188
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
++ + KT L AA +++AG + V L+ G +G+AFQ+ DD+LD G+ +G
Sbjct: 189 YIFRLKTGALIEAAFMAGAILAGAPDEVTAKLEKAGDLVGVAFQIQDDILDVTGDAEVIG 248
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K + D +N K T + +
Sbjct: 249 KPVLSDEKNNKTTYVTLY--------------------------------------GMDK 270
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A D + + L ++V + + R N
Sbjct: 271 AVSDVAELSNEAVDIICSIGGE---GFLTDLVKYMIHRNN 307
>gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 341
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/331 (16%), Positives = 121/331 (36%), Gaps = 25/331 (7%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66
+ +E + + K +++ + + GKR+RP+L L + + + D+ +
Sbjct: 10 IDEKIETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSYNGYKGKNMDDAIT 69
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------------LVG 110
A AIE +H+ L+HDD++D++ LRRGK + +
Sbjct: 70 FAAAIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYEKSYNSSKLGTDLAIVVGDIVAFYI 129
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+LS+ K + V + + + + ED I
Sbjct: 130 FGILSELKVSESTLKKIVKNFSKCYVNTGFGQLLDILYAGRIDDKIVNEDIPEKISELKT 189
Query: 171 VLFSAALEVSSLIA---GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
++ + + + G N GIAFQ DD++ G
Sbjct: 190 AYYTFVYPMLFGYYLSENNIEKEEEKILIVGKNAGIAFQYRDDIIGIFGGD----AKTLN 245
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK T + L ++ + +K + + I+ + +++K + ++R+ ++ + +
Sbjct: 246 DLHEGKFTSVIKLTYELLDENDKKIFLNLISKNPKNESDIEKLYELIRKTNSVSVLQDKI 305
Query: 288 YSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + + L + K SL +++
Sbjct: 306 NTLIEASLKYTEQLTMNEESKSSLRQLISKI 336
>gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni]
gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni]
Length = 361
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/306 (18%), Positives = 120/306 (39%), Gaps = 10/306 (3%)
Query: 12 MEKVNFLILK----RICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
M+++N ++ K + E++ Y+ GK+ R L LA L +
Sbjct: 1 MDELNSILQKTKDKSTQKEQDEILLQPFSYIQEIPGKQFRSELALAFNHWLLIPAEMLTQ 60
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++ L A V +
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGH 120
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
EA + L G+ ++ + E ++ + ++ + +
Sbjct: 121 PEATRVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQL 177
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+S ++ LG+ FQ+ DD + + K+ ED GK PVI A + +
Sbjct: 178 FSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--S 235
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+++ + +E K ++ + + T S +A+ + L + +
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCISLLEKLGSFQYTRKVLESLDAEARAEVTRLGGNPY 295
Query: 307 KKSLME 312
L+
Sbjct: 296 MDRLLN 301
>gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 287
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 67/301 (22%), Positives = 107/301 (35%), Gaps = 49/301 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ ++Y GGKRLR L + A + + + A AIE +H +L+H +DD
Sbjct: 28 LAQAMRYATE-GGKRLRAYLVIEGARLHGVPAEQAIWPATAIEALHAYSLVHDDMPCMDD 86
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
LRRG+ W T+VLVGD L S AF V + ++ L +
Sbjct: 87 DDLRRGRPTVHRKWDEATAVLVGDALQSLAFECVADPRAGSGEVRAELCLGLARAAGGQG 146
Query: 148 LSLSKNLDVTEEDY------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ L + LD+ E + + + + A + + L Y +
Sbjct: 147 MVLGQALDIAAETAGTPLSLDEITTLQAGKTGALIIWSGIAGAVMAGADPAPLTRYAQAV 206
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD G E GK +G+D GK T
Sbjct: 207 GLAFQIADDILDVEGCAEETGKAVGKDAAAGKATFV------------------------ 242
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L + RA + +A +L L + F + R
Sbjct: 243 --------------SHLGLAGAKSRASALIDEAIAALDIY--GEDGDDLRALARFVIARS 286
Query: 322 N 322
+
Sbjct: 287 S 287
>gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
Length = 424
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 106/284 (37%), Gaps = 3/284 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ +++ Y+ + GK R ++ A ++ ++ + +HT++LL DD+
Sbjct: 130 EEKVVLAPYDYVASNSGKEFRTLILNAFNAWFRVPPESLTIICDVVRMLHTSSLLIDDIQ 189
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAFCMVIETKSQEALEALSLVACTLAEGE 144
D+S LRRG+ A ++G ++ G+++ A + + ALE + L G+
Sbjct: 190 DNSLLRRGRPVAHSIYGVAQTINTGNYVYFLAAKELNKLRNAASALEVFTAEMLNLHRGQ 249
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
++L L ED + S + LG+
Sbjct: 250 GQELYWRDTLKCPTEDEYLKMVSNKTGGLFRMAVKLMQAESPAGPMAPVCDKLVQLLGLV 309
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
+Q+ DD + K ED GK + PV+ + Q + + + + V
Sbjct: 310 YQIADDYKNLTAVEYTTSKGFCEDLTEGKFSFPVVHSIQSRPEDRRLYQ--ILAQKTTEV 367
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
E K A + +L T+ Q+A+D L + +
Sbjct: 368 EVKKYAVSYIESTGSLEYTKQVVRVLVQRARDELSRIDQGRERN 411
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 53/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + + + + + + + + + Y + +GGKRLRP+L LA
Sbjct: 3 SNLNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYGK 62
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ + + CA+E IHT +L+H +DD LRRGK V+G T+VL GD LL+++
Sbjct: 63 NEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTES 122
Query: 118 FCMVIETKSQEALEALSLVACT---------LAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F ++ S L G ++ V+ + ++ K
Sbjct: 123 FRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHARK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L + ++ +++AG + + L+ + ++GIAFQ+ DD+LD G ++GK +G D
Sbjct: 183 TGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T P ++ + A + +
Sbjct: 243 TANEKSTYP----------------------------------SLLTLSGA----KEKLD 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +AK+ + L ++ L + D R +
Sbjct: 265 EHITRAKEIVSNLQ--LEQQLLHGLCDLIASRDH 296
>gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
Length = 280
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 49/308 (15%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ + + + Y + GGKR+RP+L A + + A A+E IH +L+HD
Sbjct: 12 VAQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHD 71
Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-------MVIETKSQEALEAL 133
D+ LRRGK + + ++LVGD L SQAF + + L A
Sbjct: 72 DMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGLDPVRQLAMVRLLAK 131
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + + G+ L+ EE A+L + L + + QA
Sbjct: 132 ASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGALAGKALSAEETQA 191
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L SY +G+AFQ+VDDVLD + +GK G+D + KPT IL
Sbjct: 192 LDSYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILG------------ 239
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ +++AL A A +L + + + L E+
Sbjct: 240 --------------------LEQSQAL------AEKLRNDAHRALEQFGEKARR--LREL 271
Query: 314 VDFCLQRL 321
D +QR
Sbjct: 272 ADLIVQRK 279
>gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPQINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 352
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/331 (19%), Positives = 119/331 (35%), Gaps = 30/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--MLEYRGDNHVLLACAIEFIHTAT 78
+ SD + + ++ + GGKRLRP+ + +LL A+E +H
Sbjct: 21 AHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHTVASREPDPDVLLLFSALELLHAWA 80
Query: 79 LLHDDVVDDSALRR------------GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L+HDD++D SA RR + +Q + L A + S
Sbjct: 81 LVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVS 140
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG- 185
+ AL+ A + + +++ + +
Sbjct: 141 KVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTV 200
Query: 186 ------------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ V + +G +LG+AFQL DDVL G+ GK G+D ++GK
Sbjct: 201 SRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGK 260
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T+ V A + + + K +++ +++ ++ A E R +
Sbjct: 261 RTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALT 320
Query: 292 QKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
Q+A +L P ++ K L E+ R
Sbjct: 321 QRALATLASAPINATAKAGLSELAMMAANRS 351
>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
Length = 280
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 68/308 (22%), Positives = 116/308 (37%), Gaps = 54/308 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--V 84
+ + + Y + +GGKR+RP+L A + + ++ +A A+E +HTA+L+HDD
Sbjct: 13 PPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPC 72
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----- 139
+D+ +LRRGK V+G ++L GD LL F +E +E +V
Sbjct: 73 MDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFAS 132
Query: 140 ------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ G+ L + KT L ++ + +++ +
Sbjct: 133 ALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTER 192
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L YG LG+AFQ+ DD+LD E GK G+D K T +L
Sbjct: 193 LDEYGRRLGLAFQIADDLLDATATTEEAGKTTGKDEEQDKATFVCVL------------- 239
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ + R A +++ LP S L+ +
Sbjct: 240 -------------------------GVDGAKARLKEETDAAVAAVKDLP-SP--DFLIGL 271
Query: 314 VDFCLQRL 321
+ R
Sbjct: 272 AKYLESRS 279
>gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 389
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 19/315 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
DL + E V+ + + + + + Y +G GK +RP L LA A
Sbjct: 58 DLLDRARELVDPSLRAALETLPGPLRRIAMYHFGWEDADGAPTAGSAGKAIRPALVLAAA 117
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + V A A+E H +LLHDDV+D RR + A V+G +++ GD L+
Sbjct: 118 RALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWTVFGTADAIIAGDALV 177
Query: 115 SQAFCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
S A + + + + ++ + +VT + + + +KT
Sbjct: 178 SLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQEVTLAECVEMAVAKT 237
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + +L A AL ++G G+AFQL+DD++ G+ GK G D
Sbjct: 238 GALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPGRTGKPAGADL 297
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K +LPV+ A GT + ++ +++++A + + A
Sbjct: 298 VSHKKSLPVVAALMSGTPAGTELAELY--RTPLTGDDVRRAADAVEAAGGRDWAQAEAAD 355
Query: 290 YGQKAKDSLR-CLPD 303
A L +PD
Sbjct: 356 RMADAVQELARAVPD 370
>gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC
30864]
Length = 314
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/287 (18%), Positives = 109/287 (37%), Gaps = 8/287 (2%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + + YL GK +R +L A + + ++ +H+A+LL DD+ D+
Sbjct: 8 KTLLEPYTYLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLIDDIEDN 67
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S LRRG A L++G +++ ++ A V++ EA+ A + L G+
Sbjct: 68 SKLRRGVPVAHLIYGVPSTINCANYAYFLALERVLKLNKPEAVAAFTEELLELHRGQGLD 127
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ + E+ + + +S + + R LG+ FQ+
Sbjct: 128 IWWRDSNVCPTEEEYREMVKRKTGGL---FRLSVRLMQAFSENRSNFVPLLDALGLYFQI 184
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD + + K+ ED GK + P+I + + + + ++
Sbjct: 185 RDDFANLESKEYTDNKSFCEDLTEGKFSFPIIHSILSAPSQRQLLN--ILKQRTTDIDMK 242
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
K MR+ + T Q+A + L + + L +++
Sbjct: 243 KFCLETMRKTGSFEYTIKVLNELEQEALSEIAKLGGN---QMLTDLI 286
>gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 343
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 19/315 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
DL + E V+ + + + + + Y +G GK +RP L LA A
Sbjct: 12 DLLDRARELVDPSLRAALETLPGPLRRIAMYHFGWEDADGAPTAGSAGKAIRPALVLAAA 71
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + V A A+E H +LLHDDV+D RR + A V+G +++ GD L+
Sbjct: 72 RALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWTVFGTADAIIAGDALV 131
Query: 115 SQAFCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
S A + + + + ++ + +VT + + + +KT
Sbjct: 132 SLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQEVTLAECVEMAVAKT 191
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + +L A AL ++G G+AFQL+DD++ G+ GK G D
Sbjct: 192 GALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPGRTGKPAGADL 251
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K +LPV+ A GT + ++ +++++A + + A
Sbjct: 252 VSHKKSLPVVAALMSGTPAGTELAELY--RTPLTGDDVRRAADAVEAAGGRDWAQAEAAD 309
Query: 290 YGQKAKDSLR-CLPD 303
A L +PD
Sbjct: 310 RMADAVQELARAVPD 324
>gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 294
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 50/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M LE ++ + V + + + + + ++Y GKRLRP L T M
Sbjct: 1 MIDLEKRIVQAADIVTVALDELLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ACA+E IH +L+H +DD +RRG+ + + T++L GD L +
Sbjct: 61 DLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHIQYDEATAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACT------LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF ++ + + S + Q+ + + + KT
Sbjct: 121 AAFEIMAHPDTHDDGHVRSELVRKLAIASGAKGMAGGQMIDLLGVRDDLGAVARMQRLKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + A E+ +IA ++S R AL + +LG+A+Q+VDD+LD G+ +GK G
Sbjct: 181 GALIAFAFEIPLIIARAKDSERSALMGFAQDLGLAYQIVDDILDEEGDEAVLGKAAGGKD 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
T V L L + R
Sbjct: 241 AAKGKTNYVTLL-------------------------------------GLDAAKERVNL 263
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K L + L VDF L R N
Sbjct: 264 LAAQTKSHLDIF--GERAEHLRRSVDFVLDRRN 294
>gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus
caballus]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 106/284 (37%), Gaps = 5/284 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S
Sbjct: 11 ILLEPYEYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ + +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P I A + ++ + +++ K
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENIDIKK 245
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + T KA + + +L++
Sbjct: 246 YCVHYLENVGSFDYTRNTLKELESKAYKQIDARGGNPELVALIK 289
>gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/311 (20%), Positives = 109/311 (35%), Gaps = 48/311 (15%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L + + + ++Y + SGGKR+RP+L A + + A A+E IH +L
Sbjct: 21 LSILTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSL 80
Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD+ LRRG+ + + T++L GD L + AF + + + +L L
Sbjct: 81 VHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADASLRIAWLQT 140
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSSLIAGVQNSVR 191
T A G + K+ L AA+ + +L
Sbjct: 141 LTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGALAGDPSPEDL 200
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 201 HSLDTFAATLGLAFQVRDDILDIESSSEQLGKTTGKDAIQQKSTFP-------------- 246
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
++ A + A + P L
Sbjct: 247 --------------------ALLSVEGAKCYLQELAERLYTQLH------PYGERAAPLT 280
Query: 312 EVVDFCLQRLN 322
+ ++R +
Sbjct: 281 ALARLAVERAH 291
>gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L D + + ++N + +++ + +++ Y + +GGKRLRP+L LAT +L +
Sbjct: 2 KLTDFSELYLPQINSFLKEQLECTINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHP 61
Query: 61 -GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 ISEKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121
Query: 118 FCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + A+ + + + + E + KT L
Sbjct: 122 IQWIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++++++ A + V+ L + G A+Q+ DD++D + GK +D NG
Sbjct: 182 IVASVQMAAEYASSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKKTHKDADNG 241
Query: 233 KPTLPVI 239
K +
Sbjct: 242 KNNTLTM 248
>gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149]
gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149]
Length = 289
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 76/320 (23%), Positives = 123/320 (38%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V K + + I + + + SGGKRLR L L TA + + + A AI
Sbjct: 11 AAVQAHFDKVLAEFEPLPIVEAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAI 69
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD +RRG+ W + T+VL GD L + AF +V + +
Sbjct: 70 EALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPS 129
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV-------IKSKTAVLFSAALEVSSL 182
E + +A +LA Q + + H + + + +
Sbjct: 130 AEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDEITRLQQGKTGALIGWSAQA 189
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A + + ALK Y LG+AFQ+ DD+LD G+ ++GK +G+D GK T +L
Sbjct: 190 GARLAQADTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLL-- 247
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L RA S +A DSL
Sbjct: 248 ------------------------------------GLDAARTRAMSLIDEACDSLATY- 270
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
+ +L + F ++R +
Sbjct: 271 -GARADTLKDTARFVVRRTH 289
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 79/327 (24%), Positives = 127/327 (38%), Gaps = 56/327 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
K++ + + ++ D + Y + +GGKRLRP+L AT + +
Sbjct: 16 FIEKELARYANELQ-----CPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIG 70
Query: 67 LACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
ACA+E IHT +L+H +DD LRRGK V+G +VL GD LL+ AF +V
Sbjct: 71 AACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAY 130
Query: 125 KSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + L ++ +T + ++ K KT L
Sbjct: 131 NYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEF 190
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A+ +++AG + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T
Sbjct: 191 AVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKST 250
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ A+ + + KAK
Sbjct: 251 YTTLF--------------------------------------AIDEAKSILEETIAKAK 272
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D++ L L+ V D +R N
Sbjct: 273 DAIMSLQLQD--TYLLSVCDLIAKRNN 297
>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
Length = 303
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/342 (21%), Positives = 127/342 (37%), Gaps = 59/342 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M L D++ +++ I + S E + V + + GGKR+RP L ATA
Sbjct: 1 MSALTDVSANALQQAQQRIHDDLLTALDAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 HLNPNNNAAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGD 120
Query: 112 FLLSQAFCM-----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
L S AF + V + + ++ L+ + + G++ L
Sbjct: 121 ILQSMAFEILGSRLFDAGPVVDQGIVLKQMQILATASSKMVCGQVLDLQAEGKRVDQTAL 180
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
A++ +A + + + + L+ Y +G+AFQ+ DD+LD +
Sbjct: 181 ENIHRNKTGALISAAVMMAAVTVFDGCDQAIPKLREYAQAIGLAFQVQDDILDIISNTDV 240
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G+D + K T P ++ L
Sbjct: 241 LGKTAGKDEQVEKSTYPALM--------------------------------------GL 262
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + +A +L P L ++ F L R +
Sbjct: 263 ESAQDYAKTLHDQAFAALAYFPM-DAAAELNQISQFLLARQS 303
>gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 410
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 69/352 (19%), Positives = 131/352 (37%), Gaps = 48/352 (13%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------DNHVLLAC 69
+L+ I ++ + + ++ + +GGKRLR +L+ + V
Sbjct: 59 RELLEGISAETLPLLEAIE-SLSTGGKRLRALLSYWGWRGAGGAPVTENRASWSIVKAGM 117
Query: 70 AIEFIHTATLLHDDVVDDSALR----------------RGKVAARLVWGNQTSVLVGDFL 113
A+E T+ L+HDD++D S R +G +L GD
Sbjct: 118 AVELFQTSALIHDDIIDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLT 177
Query: 114 LSQAFC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
L+ + + + V ++ +++ + L+V
Sbjct: 178 LAWSAEVFASLGEGAIYGAPARTIFDRMRTEVLAGQYLDVYSEVLETEDAQAALQRALNV 237
Query: 165 IKSKTAVLFS--------------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
I+ K+A ALE + Q+ V +++G+ LG FQL DD
Sbjct: 238 IRFKSAKYSCEHPFTIGGALALQATALENGTGAVSEQHPVLAGYRAFGLPLGEGFQLRDD 297
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
L G+ GK G+D R GK T+ V L +++ +++ D ++S E +++
Sbjct: 298 ELGVFGQPEVTGKPAGDDLREGKRTVLVALTSAALDEKDAALLHNSLGDSELSDEQVERI 357
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+M + A E Q ++L + D +L ++V L+R
Sbjct: 358 RELMVSSGAFAKHEQLIEQKSQAVFEALEAMNLDELAHAALTDIVGRALRRK 409
>gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 13/245 (5%)
Query: 5 EDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + + + +++ + GGKR+RP+L A+ +
Sbjct: 3 SALFDHWIARTERSLEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDF 112
D A A+E IH +L+HDD+ + +
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL+ A S A + A + G+ + + + +D + KT L
Sbjct: 123 LLATASASAELRVSWIQSLATAAGAAGMCGGQALDIDATG-QLQSLQDLQRMHALKTGAL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA+ + +L G + +Q L + LG+AFQ+ DD+LD ++GK G+D
Sbjct: 182 IRAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQA 241
Query: 233 KPTLP 237
K T P
Sbjct: 242 KSTYP 246
>gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62
+ D + MEKV + ++ Y +GGKR+RP++ LA +L
Sbjct: 19 INDHFAELMEKVEKH--------QPQLARMMAYSFNAGGKRVRPLILLAILEVLGEPINP 70
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + +A A+E +HT +L+HDD+ +D+ LRRG+ + +G ++L GD LL+ AF
Sbjct: 71 DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALLTIAFQW 130
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E K+ + Q + T E + + KT +
Sbjct: 131 LAATGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHELKTGQMLI 190
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + IA + +V A+ + N G+AFQ+ DD++D E+GK G+D K
Sbjct: 191 FPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVELGKTAGKDQALNKN 250
Query: 235 TLPV 238
T
Sbjct: 251 TYVN 254
>gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
Length = 294
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62
+ D + MEKV + ++ Y +GGKR+RP++ LA +L
Sbjct: 16 INDHFAELMEKVEKH--------QPQLARMMAYSFNAGGKRVRPLILLAILEVLGEPINP 67
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + +A A+E +HT +L+HDD+ +D+ LRRG+ + +G ++L GD LL+ AF
Sbjct: 68 DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALLTIAFQW 127
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
E K+ + Q + T E + + KT +
Sbjct: 128 LAATGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHELKTGQMLI 187
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + IA + +V A+ + N G+AFQ+ DD++D E+GK G+D K
Sbjct: 188 FPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVELGKTAGKDQALNKN 247
Query: 235 TLPV 238
T
Sbjct: 248 TYVN 251
>gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952]
Length = 314
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 10/291 (3%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V
Sbjct: 23 GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 82
Query: 101 WGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + ++ A L+ L +G+ + +S VT
Sbjct: 83 HGPAQAILVGDALFALANEVLLEIGTVEAGRATRRLTTATRKLIDGQAQDISYEHRERVT 142
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A+ + +++ G + L+SYG +LG+AFQ VDD+L G+
Sbjct: 143 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVDDLLGIWGD 202
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK------ISVENLKKAF 271
GK D R K +LPV+ A G + + D K S E
Sbjct: 203 PVATGKQTWSDLRQRKKSLPVVAALAAGGPASERLGELLAADAKSNDVDSFSEEEFATRA 262
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++ E T A A ++L + + L+ + DF + R
Sbjct: 263 ALIEEAGGREWTSQEARRQHTVAIEALSGVDMPERVRAQLVALADFVVVRK 313
>gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
subsp. longum F8]
Length = 360
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRG+
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATACIEITCRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFV 355
>gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 382
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 114/304 (37%), Gaps = 23/304 (7%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L
Sbjct: 77 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 136
Query: 100 VWGNQTS----------------VLVGDFLLSQAFCMVIE-----TKSQEALEALSLVAC 138
+G +L+GD L A M+ + + Q A +
Sbjct: 137 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAWPRYDAMRV 196
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSY 197
LA G+ L+ + L V + K+ LE+ + +AG + L Y
Sbjct: 197 ELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRY 256
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G AFQL DDVL G GK D K T V+ A Q +
Sbjct: 257 GAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQLADPPVRRELIELA 316
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
+ +++ ++ E A+ E A++ L LP D S + +L E+
Sbjct: 317 TRDVLDAAAIERWKALIVETGAVRLIERMISDRVASAREQLCGLPVDESVRAALAEMAAV 376
Query: 317 CLQR 320
C R
Sbjct: 377 CTDR 380
>gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 66/342 (19%), Positives = 116/342 (33%), Gaps = 75/342 (21%)
Query: 16 NFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR------GDNHVL 66
+ + + + + + I +++ F+GGKRLRP+L L A M+
Sbjct: 19 DAALERLLPAPDTLPHSIHRAMRHSTFAGGKRLRPILALEAARMVSGGTLTPALETAAAE 78
Query: 67 LACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
L A+E IHT +L+HDD+ D+ LRRG+ +V+G T++L GD L + AF +
Sbjct: 79 LGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIANL 138
Query: 125 KSQE------------------------ALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+ + + V
Sbjct: 139 HAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELVEAIH 198
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
T + + L + L+++G G+AFQ+VDDVLD + +
Sbjct: 199 RAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQDSAQ 258
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G+D K T P + +
Sbjct: 259 LGKTAGKDTATDKATWPAVF--------------------------------------GI 280
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A A +L +++ L + +F +R N
Sbjct: 281 PQSIHDAEELIADAFAALARFAETAA--PLKALANFLTERKN 320
>gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 405
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 19/315 (6%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
DL + E V+ + + + + + Y +G GK +RP L LA A
Sbjct: 74 DLLDRARELVDPSLRAALETLPGPLRRIAMYHFGWEDADGAPTAGSAGKAIRPALVLAAA 133
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
L + V A A+E H +LLHDDV+D RR + A V+G +++ GD L+
Sbjct: 134 RALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWTVFGTADAIIAGDALV 193
Query: 115 SQAFCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
S A + + + + ++ + +VT + + + +KT
Sbjct: 194 SLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQEVTLAECVEMAVAKT 253
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + +L A AL ++G G+AFQL+DD++ G+ GK G D
Sbjct: 254 GALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPGRTGKPAGADL 313
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K +LPV+ A GT + ++ +++++A + + A
Sbjct: 314 VSHKKSLPVVAALMSGTPAGTELAELY--RTPLTGDDVRRAADAVEAAGGRDWAQAEAAD 371
Query: 290 YGQKAKDSLR-CLPD 303
A L +PD
Sbjct: 372 RMADAVQELARAVPD 386
>gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 258
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 7 LTLKDME-KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ D+ K+ + + + + +++ D + Y +F GKR+RP+L + + ++
Sbjct: 1 MIFDDLRPKIEKRLRELLTPFEPKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDLDEEDA 60
Query: 65 VLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ L CA+EFIH +L+HDD+ D+ RRGK ++G ++L GD LLS AF
Sbjct: 61 ITLGCAVEFIHNYSLIHDDMPELDNDDERRGKPTCHKIFGQDIALLAGDGLLSLAFD 117
>gi|94502447|ref|ZP_01308879.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|94450996|gb|EAT13989.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
Length = 137
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + L S + +I ++ Y GK +RP+ ML
Sbjct: 16 IIENGIGIFETLFRNNFYSKIPLIQEINNYFFNIKGKYIRPIFVFLITKMLGNISKKTYD 75
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
LA IE IHTA+L+HDDV+D S RRG ++ +W N+T+++ GD++ S++F
Sbjct: 76 LAILIELIHTASLIHDDVIDFSNTRRGFLSINAIWQNKTALVFGDYIFSKSFD 128
>gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
DSM 44702]
Length = 373
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 69/366 (18%), Positives = 119/366 (32%), Gaps = 47/366 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPD----------VVKYLIFSGGKRLRPMLTLA 52
L+ V+ + + I D ++ + GGKRLRP+ A
Sbjct: 9 TLDRPLADVPSAVDAELDRFFHDRHAEIDDLDPVVADGVDALEQFVTGGGKRLRPLFAWA 68
Query: 53 TALML----------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
++ + ++EFI L+HDD++D S RRG+ +
Sbjct: 69 GVRAALDGGGGTLSGSTGPEDLLRAVGSLEFIQACALIHDDIIDHSDTRRGRPTTHRRFE 128
Query: 103 NQT----------------SVLVGDFLLSQAFCM------VIETKSQEALEALSLVACTL 140
++LVGD + A M + ++ + +
Sbjct: 129 ASHRGNGWSGDAVGYGESQAILVGDLAFAWADDMLVDSGVDAASLARAREPWRKMRTEVI 188
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
A L + + A L + + + L++ G
Sbjct: 189 AGQMLDIALENSGSEDPAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVDLLRTAGRE 248
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+GIAFQL DD L G+ GK G+D R+GK T V+ A + +
Sbjct: 249 IGIAFQLEDDHLGVFGDPQVTGKAAGDDLRSGKRTWLVMRALATADRTDPAAAARLRAGM 308
Query: 261 K--ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDF 316
S + + I+ ++ A RA A D+LR L L+ V +
Sbjct: 309 GTVRSDAEVDELRQIIVDSGAAAHNTGRARELTDTAVDALRTGHLGRGIV-DELVTVAEQ 367
Query: 317 CLQRLN 322
+R +
Sbjct: 368 LTERRS 373
>gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262]
gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262]
Length = 293
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ + K I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLMLFLDHYKKVLDESLFKEINMRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+H +DD RRGK ++G+ T++L GD LL+
Sbjct: 61 IEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLA------EGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF ++ E ++ ++L+ +Q + + L I ++
Sbjct: 121 AFSILAEDENLSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKT 180
Query: 171 V-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LEGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVSIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/321 (19%), Positives = 113/321 (35%), Gaps = 51/321 (15%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + + + ++Y + SGGKR+RP+L A + + A
Sbjct: 11 QRTDSYLERTLSIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF + + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPAD 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSS 181
+L L T A G + K+ L AA+ + +
Sbjct: 131 TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALKSGTLMRAAVRMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 191 LAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFP---- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ A + A +
Sbjct: 247 ------------------------------ALLSVEGAKCYLQELAERLYTQLH------ 270
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P L + ++R +
Sbjct: 271 PYGERAAPLTALARLAVERAH 291
>gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 18/312 (5%)
Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++++ V IL+ + D E ++ +L + GK LR L L A + + L
Sbjct: 2 EELKIVKDRILEFVKECDDEKSIELFGHL--ATGKMLRSKLILKIA----GINEESIKLC 55
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH A+LLHDDV+D++ RRG + ++ +T+++ GD L S+AF + +++
Sbjct: 56 AIVEMIHAASLLHDDVIDEATTRRGSPSVNALYDAKTAIMFGDVLYSKAF-TELSQMNKK 114
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
+S L+ GE+ + L++ + YL +I KTA L A+ ++++A
Sbjct: 115 VAYNISSAVTKLSIGEMMDIDLTQTFNTDYNLYLDMIYKKTASLIEASAASAAILANKDE 174
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
YG NLG+AFQ++DD+LD + +GK DF GK T+P +L QR +
Sbjct: 175 E---KYALYGKNLGLAFQMIDDILDITQDAQTLGKPAMFDFVEGKATIPYLLLHQRLDDK 231
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
K +++ E M +L D +A + G++A L +
Sbjct: 232 TKLESLF---KKELNEEEALWIKQQMERTDSLNDAIAQAKALGREAIMILED----ENSE 284
Query: 309 SLMEVVDFCLQR 320
L++++ ++R
Sbjct: 285 GLIKIMKEMIER 296
>gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
Length = 368
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 71/355 (20%), Positives = 119/355 (33%), Gaps = 40/355 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-DV--EMIPDVVKYL---IFSGGKRLRPMLTLATALM 56
+ +++ + S DV + + V++L + GGKR+RP +
Sbjct: 15 QIPAAVQREL---EKFFTEHGPSVDVIGPPVSEAVEHLRTFVLGGGKRIRPTFGWVGFVG 71
Query: 57 LEY------RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----LVWGNQT 105
+ ++EFI L+HDD++D SA RRG +
Sbjct: 72 ANGLENTEEDPAAVLCAVSSLEFIQACALIHDDIIDASATRRGNPTVHVAAAHSHREHNW 131
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH-- 163
F S A + A + +V L
Sbjct: 132 LGDSDKFGESLAILVGDLALVWADDMWHHSGLSHAALLRASEPWRGMRTEVIGGQILDIS 191
Query: 164 ---------------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
A L + + IAG + AL+ YG ++GIAFQL
Sbjct: 192 LEAAGCESEELANAVNRFKTAAYTIERPLHLGAAIAGADDDTIAALRRYGHDIGIAFQLR 251
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVEN 266
DD+L G+ GK G+D R GK T+ A Q +R+ + + ++ +
Sbjct: 252 DDILGVFGDPEVTGKPAGDDLREGKRTVLYSRALQAADERDPAAAQRLRDGIGTALTPDE 311
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
+ + I+RE A+ D E R + +R S ++L + R
Sbjct: 312 IAELSGIIRETGAVEDVEKRIDELTESGLAHVRGAALSPEAVETLETLAVNATAR 366
>gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
Length = 360
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + ++ L V
Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTNALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ + + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQILDLAVEMTPLSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTEDKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEADCRNDDQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFV 355
>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
Length = 290
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y I GGKR+RP+L L + + + + A
Sbjct: 8 EEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAM 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLE 127
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 128 EGTSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 188 GAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ + L
Sbjct: 248 F--------------------------------------GLEECKKKCVNITEECIEILS 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 270 SIEGN--TEPLKVLTMKLLERK 289
>gi|255024193|ref|ZP_05296179.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
Length = 151
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F+ + + + + G LG+AFQ++DDVLDY +GK + D + G
Sbjct: 5 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQG 64
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+LP+I A + F ++ E ++ ++ + + A Y
Sbjct: 65 IYSLPLIYAMK---GHLSEFEPLLSQKLDMTNEASEQVLALISKYNGVEQAFKLANKYTN 121
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA ++ LP +++ + + L R
Sbjct: 122 KALREIKKLPAGTYRDDMYRLTKNILDR 149
>gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 51/320 (15%)
Query: 13 EKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + + + + ++Y SGGKR+R L L A + + + ACAI
Sbjct: 21 ARVQDHLDRVLAAFGDGAVAQAMRYAC-SGGKRIRARLVLDGARLHDIPEARALWPACAI 79
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG+ + W T+VL GD L + AF +
Sbjct: 80 EAMHAYSLVHDDLPCMDDDDLRRGQPTVHIRWNEATAVLTGDALQALAFELATHPDGAAT 139
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAVLFSAALEVSSL 182
+A + +A +LA Q + + + + + +
Sbjct: 140 AQARADLALSLARAAGGQGMVLGQALDIAAETADRPLTLDEITHLQAGKTGALIEWAACA 199
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ + L +Y LG+AFQ+ DDV+D G+ GK +G+D GK T +L
Sbjct: 200 GPRMALADTAPLAAYAAALGLAFQIQDDVIDVIGDAAAAGKAVGKDAAAGKATFVSLL-- 257
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + RA S A D+L
Sbjct: 258 ------------------------------------GLDEARARAASLVDHACDALSGYG 281
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
D + +SL + F + R +
Sbjct: 282 DDA--ESLRALARFVISRHS 299
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
++ + VN + K + S + + + Y +GGKR RP+L+L
Sbjct: 6 QIDQEIAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSATNGGKRFRPVLSLLVGE 65
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ + + A A+E IHT +L+HDD +D+ +RRGK V+G ++L GD L
Sbjct: 66 LFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGDAL 125
Query: 114 LSQAFC 119
L++AF
Sbjct: 126 LTEAFM 131
>gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
AX4]
gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
AX4]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/289 (19%), Positives = 106/289 (36%), Gaps = 6/289 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
SD ++I + Y+ S GK R L + L+ + ++ I+ +H A+LL DD
Sbjct: 14 KSDFKLI-EPYTYICESSGKGFRNALIKSFDYWLKVGDEKVQDISKVIQGLHGASLLIDD 72
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D+S LRRGK A ++G ++ +F+ + +A L G
Sbjct: 73 IEDNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQCNKLGDPKATTIFIEELIRLHRG 132
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + E + ++ + + + +LG+
Sbjct: 133 QGYDIFWRDTNTSPSEQEYMNMVNEKTGG---LFRLGLRLLQAFSDNNTNYIDLVEDLGM 189
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+Q+ DD+++ + K+ ED GK + P+I A + + S
Sbjct: 190 YYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHAINADSNDNRLLRILKQKTEDRS 249
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
V + A ++ +L TE + +K + L + LME
Sbjct: 250 V--KEHALEYIKSKGSLEYTEKKLNVLKEKIIKQINDLGGNPILMKLME 296
>gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
okayama7#130]
gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
okayama7#130]
Length = 505
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 17/266 (6%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
Y V LA +E +HTA+LLHDDV+D+SALRRG +A +GN+ SVL G+F+L +A
Sbjct: 190 YVLPTQVRLAQIVEMLHTASLLHDDVIDESALRRGAASAPSAFGNKQSVLGGNFVLGRAS 249
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQ------------LSLSKNLDVTEEDYLHVIK 166
+ E + ++ V L EGE+ Q S + + +K
Sbjct: 250 AALSRLGDPEVTQLIAGVLSNLVEGEILQLKEIQLDGSPETASQRRQDAWNIYLHKTYLK 309
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ + + A V ++ +YG NLGIAFQLVDDVLDY +GK G
Sbjct: 310 TASLMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYESASATLGKPGG 369
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D G T P + A++ + + + G ++++A ++ + + T+
Sbjct: 370 ADLELGLATGPALYAWEEYPEIGELICRKFEQPG-----DVERARDLVLRSSGVERTKAL 424
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLME 312
A Y KA++ L+ +PDS K +L
Sbjct: 425 AQEYASKAREVLQEIPDSDAKAALEN 450
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ ++ +L + S I ++ KY K +RP++ L + G +
Sbjct: 55 KFVEPQLNELRTSLLSMLGSGHAAISEITKYYFLHPSKHVRPVIVLLLSQATNGLGSDWS 114
Query: 66 LLACAIE 72
+
Sbjct: 115 KKLWEAQ 121
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKEILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
Length = 376
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/359 (20%), Positives = 126/359 (35%), Gaps = 51/359 (14%)
Query: 13 EKVNFLILK----------RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML----- 57
V + + I V +VV+ + GGKR+RP+ A
Sbjct: 16 AAVEARLREFFAAALPVAEAISPAVGAAAEVVRDFVLQGGKRIRPVFVYAGWRCGISARA 75
Query: 58 ----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT-------- 105
+ + + A+E + L+HDD++D S RRG+ + ++
Sbjct: 76 AGADAAEAADTLRVCAALELVQACALIHDDIIDRSDTRRGRPTVHRDFEHRHRDRQWSGD 135
Query: 106 --------SVLVGDFLLSQAFCMVI------------ETKSQEALEALSLVACTLAEGEL 145
++L GD L+ A +V + + + G+
Sbjct: 136 PGGFGVAAAILAGDLALAWADDLVHGLAPGAAPDDDATPLPAPVGATWASMRTEVLGGQY 195
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIA 204
+ D + + V++ KTA A E+ + +AG + L+S G +LGIA
Sbjct: 196 LDIVNEAAGDESVQAAYQVMEYKTAAYTVARPLELGARMAGAPADLIADLRSVGHDLGIA 255
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKI 262
FQL DD+L G+ GK G+D +GK T + A +R + ++
Sbjct: 256 FQLRDDLLGVFGDPARTGKPSGDDLISGKRTALLATALRRAGDTGPRLAAQLRDAIGREL 315
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
S + L A I+ + A+ + E A L + L V R
Sbjct: 316 SDDELDSARSILVDVGAVDEVESTISELLTSALSVLARADIGPQIRSELTAVAHRTAHR 374
>gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
Length = 350
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 35 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 94
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+ D L + A + E
Sbjct: 95 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLRDALHATAVRILTGLTDE 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 155 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 214
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 215 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 275 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 331
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 332 AVRSPDLIALSQLICRR 348
>gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu010]
gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu011]
gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu010]
gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu011]
gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
Length = 354
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 39 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 98
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 99 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDE 158
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 159 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 218
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 219 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 278
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 279 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 335
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 336 AVRSPDLIALSQLICRR 352
>gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4]
gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
Length = 286
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + + + + + + I ++Y + GGKRLRP L L A +
Sbjct: 2 DFNRILAEKARLIEEALDRYLPPEFAPPHPIHQSMRYSVLGGGKRLRPALLLGAAEAVGA 61
Query: 60 R-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
++ +L AC IE IH +L+HDD+ +
Sbjct: 62 DVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSH 103
Score = 35.7 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+KA +L L + +F L R +
Sbjct: 257 VKKALSALDSF--GPEADFLRQAAEFVLSRKS 286
>gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv]
gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
(POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium
tuberculosis H37Rv]
gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
Length = 350
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 35 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 94
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 95 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDE 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 155 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 214
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 215 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 275 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 331
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 332 AVRSPDLIALSQLICRR 348
>gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular
pool of geranylgeranyl diphosphate [Pichia pastoris
GS115]
gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular
pool of geranylgeranyl diphosphate [Pichia pastoris
GS115]
gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435]
Length = 336
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/302 (18%), Positives = 112/302 (37%), Gaps = 17/302 (5%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
++I + KY+ GK R +L LE + + I+ +H ++L+ DDV D
Sbjct: 16 EKLITEPYKYIKKVPGKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHNSSLMVDDVED 75
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGE 144
+ LRRG A V+G ++ +++ A + + + +
Sbjct: 76 SATLRRGIPATHNVFGIPQTINTANYMYFVAIQKAGTLGNHARVNDVLIEEMMNLHRGQG 135
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS---SLIAGVQNSVRQALKSYGMNL 201
L + +EE YL ++ +KT LF + + +L + L
Sbjct: 136 LDLYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPNDGVERKASSLVHFANLL 195
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
GI +Q+ DD L+ + + K ED GK + P+I + Q
Sbjct: 196 GIVYQIRDDYLNLKSDQYNQNKGFCEDITEGKFSFPIIHSIQNSDDTGLLSILKLR---- 251
Query: 262 ISVENLKK-AFIIMRENRALVDTEYRAYSYGQKAKDSL-------RCLPDSSWKKSLMEV 313
+ E LK+ A M + + + + + ++ + L + S + L+++
Sbjct: 252 TNDEKLKRFALTYMEQTGSFQYAKEKLSALAKEGEKMLGKISAEFNHIDTSHLNEFLIKL 311
Query: 314 VD 315
Sbjct: 312 TR 313
>gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
Length = 330
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 110/319 (34%), Gaps = 11/319 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ ++ +L + +++ GGK LR +L + L + + A+E
Sbjct: 10 DALHERLLGHLTHPDPAYQALLQEYPSRGGKMLRGLLVVYAGLAHGATLEASLWAGTALE 69
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKS 126
L+HDD+ D S RRG+ A ++ ++ GD L + +
Sbjct: 70 LFQNWVLIHDDIEDGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIRGLNEGLFGP 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ E +V T L L + + + A ++A +
Sbjct: 130 EVLAEFHQVVHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVAPLRLGALLS 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + G+ LGIAFQ++DDVL+ G+ + G+ + + + + +
Sbjct: 190 GKTPPALYEEAGLKLGIAFQIMDDVLNLEGDQAYGKELAGDLYEGKRTLILIRYLQEAPK 249
Query: 247 KREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA----KDSLRCL 301
+ + E ++ + + + A+ + A Q+ L L
Sbjct: 250 EDRTRAEALLSLPREAKPEAEVRWLWQNLLVSGAVAWAKEEARRLAQEGMGALISYLDTL 309
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L ++ ++R
Sbjct: 310 PGREAASHLQNLLTALVER 328
>gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
125-2-CHN]
gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
125-2-CHN]
gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
Length = 289
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + S+VE I ++ Y + GGKRLRP+L LAT L + + + +AC I
Sbjct: 15 IDDYLAKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEEPEIRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--- 126
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSKSAK 134
Query: 127 --QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
G + + L + G ++Q+ DD++D E GK +D GK
Sbjct: 195 GASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGKATHKDEAEGKNNTL 247
>gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
Length = 368
Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/333 (21%), Positives = 129/333 (38%), Gaps = 33/333 (9%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYR-------GD 62
++ N + + S +++ V+K I S GGKRLR +LT++
Sbjct: 24 QQFNTGLENNLSSTCAQILQQVIKQAIVSSEGGKRLRALLTISAFYAASKETNIQKIHEQ 83
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL------VWGNQTSVLVGDFLLSQ 116
+ +ACA+E TA L+HDD++D+S LRRGK +A + + L
Sbjct: 84 SVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKVCNNKHIGTGLGLMLGDLL 143
Query: 117 AFCMVIETKSQEALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
A +++ + + G++ LS+ +
Sbjct: 144 ATESFDIARNRAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEMMQLDNPIQLAESSLNV 203
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI------AFQLVDDVLDYRGEVNEMG 222
++ V+ L G + Q ++Y + I AFQ+ DD+LD + G
Sbjct: 204 FRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQIADDLLDIVSDSKITG 263
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K IG D R GK + + A Q G E+ S +++ K I + A+
Sbjct: 264 KPIGGDIREGKRAVLLADALQYGNDNEREILLKAYTSSTRSEDDVNKIIQIYHTSGAIEK 323
Query: 283 TEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEV 313
++ R + ++ ++ L DS K L E+
Sbjct: 324 SKKRIENLWNDSQQAIESSTLSDS-GKAILHEI 355
>gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7]
gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7]
Length = 282
Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 10/275 (3%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++N +L+ I + + +KY + +GGKR+RP++ L + +++ +ACA
Sbjct: 5 IEQINERLLEIIEEFGDSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDIACA 64
Query: 71 IEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+HDD+ LRRG++ + T++L GD LL++A ++I+TK +
Sbjct: 65 IEMIHTYSLIHDDLPGMDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVIIKTKVPD 124
Query: 129 ALEA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L+ A + L Q + + + +
Sbjct: 125 ELKISLLATLYQASGINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAMKMGAL 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN---IGEDFRNGKPTLPVILA 241
++ G +G+AFQ+ DDVLD G+ + +GK + ++ TL +
Sbjct: 185 IANPDDQKTWVEIGYKIGLAFQIQDDVLDVVGDSSLLGKKVGSDQVNHKSTYVTLMGVEQ 244
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
Q ++ I KI+ + + +++
Sbjct: 245 SQMIVEQYFKEAMELIYKLKINHGLILEIMEKLKK 279
>gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+L + ++ ++ K + S E I + ++Y + +GGKR+RPML T M
Sbjct: 2 NFNELREAKVTEIENILRKYLPDSSGHQEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGG 61
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
G AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ A
Sbjct: 62 TGKIIEPFMAAIEMIHTYSLIHDDLPAMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYA 121
Query: 118 FCMVIETKSQ 127
F E
Sbjct: 122 FETASEAFDM 131
>gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 294
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/318 (18%), Positives = 110/318 (34%), Gaps = 52/318 (16%)
Query: 16 NFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++ + + + + ++Y + GGKR+RP+L A A + + N A A+E
Sbjct: 16 ERALVQYLPAATALPLRLHAAMRYAVLDGGKRVRPLLVQAAAELFDAAPANVARAASAVE 75
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVGDFLLSQAFCMVIE 123
IH +L+HDD+ + + + F+L+
Sbjct: 76 MIHAYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDALQAQAFFVLAGMDIEPAR 135
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ L A + + + G+ L+ E A+L ++ L +
Sbjct: 136 AVAMLRLLADAAGSIGMCGGQAIDLASVGMDLSLAELEQMHRLKTGALLRASVLLGAWCG 195
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ AL++Y +G+AFQ++DDVLD + +GK G+D + KPT IL
Sbjct: 196 TTPDAAATAALEAYAAAIGLAFQVIDDVLDATADSATLGKTAGKDAADHKPTYVSIL--- 252
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + A A + LP
Sbjct: 253 -----------------------------------GLEPSRALAEKLRSDAHRA--VLPF 275
Query: 304 SSWKKSLMEVVDFCLQRL 321
+ L ++ D +QR
Sbjct: 276 GDKARHLRDLADLIVQRK 293
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKGILEET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter sp. ADP1]
Length = 302
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 71/342 (20%), Positives = 128/342 (37%), Gaps = 60/342 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATA 54
M + + ++ I + + + E + V + + GGKR+RP L A A
Sbjct: 1 MTSISHVNANVLQAAQERIQQDLTTALDAFDLPEPLKSAVYHTVMLGGKRVRPALCYAVA 60
Query: 55 LML-EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGD 111
M A A+E IH +L HDD +D+ LRRG+ + +G T++L GD
Sbjct: 61 SMEKNPNYAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD 120
Query: 112 FLLSQAFCMVIETKSQE-----------ALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
L S AF ++ + ++ L+ + + G++ L E+
Sbjct: 121 ILQSMAFEVLGSRLFDQQNSVDASIVLRQMQILATASSKMVCGQVLDLQAEGKEIDQEQL 180
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
A++ +A + + + + L+ +G +G+AFQ+ DD+LD
Sbjct: 181 ENIHRNKTGALIQAALMMGAVTLFSGMDQAIPHLRQFGQRIGLAFQVQDDILDIISSTET 240
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+GK G+D + K T P ++ L
Sbjct: 241 LGKTAGKDQQVQKSTYPALM--------------------------------------GL 262
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A + +A SL D++ L ++V F L R +
Sbjct: 263 DAAQNYAKNLHDQALASLDYFGDAAI--ELQQIVQFLLSRKS 302
>gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 370
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/360 (18%), Positives = 126/360 (35%), Gaps = 47/360 (13%)
Query: 6 DLTLKDME-KVNFLILKRICSD-----------VEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ D+ +V + + + + ++V+ + GGKR+RP
Sbjct: 11 AVVEADLPGRVQETLADYLRTRRTQSRELDAAFATAVDELVR-FVLGGGKRIRPTFAWWG 69
Query: 54 ALMLEYRGD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG--NQTS 106
D + A ++E + L+HDD++DDS RRG + ++
Sbjct: 70 WRAAGGAADGPQAQAMLRAASSLELLQACALVHDDLIDDSDTRRGNPTVHQAFAALHRHQ 129
Query: 107 VLVGDFL------------LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
G+ L+ A+ + S EA++ L+
Sbjct: 130 RWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAMARGLRPWRAMRTEVLAGQYLD 189
Query: 155 DVTEEDYLHVIK--------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + + LE+ + +AG + +AL+ +G ++G+AFQ
Sbjct: 190 LLGPVRGDETPQAALRIDELKSASYTVQRPLELGAELAGADETALEALRRFGSDIGVAFQ 249
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST----INDGKI 262
L DD+L G+ GK G+D R GK TL + A + + + D +
Sbjct: 250 LRDDLLGVFGDPEVTGKPAGDDLREGKRTLLIAEALESAQGQGDQDALDLLRGVLGDENL 309
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQR 320
+ ++++ +R A+ E R A +L L + L E+ R
Sbjct: 310 DEKRVEQSREALRRLGAVDAVERRITELTGTAMAALHGAGLAE-PAASRLAELAVAVTDR 368
>gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023]
Length = 293
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ + K I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLTLFLDYYKKVLDESLFKEINMRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ A A+E IHT +L+H +DD RRGK ++G+ T++L GD LL+
Sbjct: 61 IEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTL 120
Query: 117 AFCMVIETKSQEALEALSLVACTLA------EGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF ++ E ++ ++L+ +Q + + L I ++
Sbjct: 121 AFSILAEDENLSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKT 180
Query: 171 V-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G D
Sbjct: 181 GELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA 240
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
K T P +L L +
Sbjct: 241 FLNKSTYPGLLT--------------------------------------LEGAKRALNE 262
Query: 290 YGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ AK +L D + L+++ D R N
Sbjct: 263 HVSIAKSALSGHDFDD----EILLKLADLIALREN 293
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 54/331 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + + K++ V + + + + + Y + +GGKR+RP+L LAT
Sbjct: 9 MTEYKAIIDKEL--VEQI--DYLSIPTS-LKESMIYSVSAGGKRIRPVLLLATIEAFGKS 63
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E +HT +L+H +DD LRRGK V+G T++L GD LL+ +F
Sbjct: 64 PALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTYSF 123
Query: 119 CMVIETKSQEALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ K + LV G + +T E+ ++ ++KT
Sbjct: 124 EVIASMKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEELEYIHRNKTGK 183
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++I G + K Y ++G+AFQ+ DD+LD G +++GK +G D N
Sbjct: 184 LLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSDVNN 243
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T P +L L + + +
Sbjct: 244 DKSTYPSLLT--------------------------------------LEGAKEKLEYHR 265
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A L S L ++++ + R +
Sbjct: 266 NEAHSILHK--TSQKTVLLNDLIEMIVSRDH 294
>gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu005]
gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu006]
gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu005]
gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu006]
gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
Length = 354
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 39 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 98
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 99 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDE 158
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 159 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 218
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 219 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 278
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 279 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 335
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 336 AVRSPDLIALSQLICRR 352
>gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684]
gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + F+ + +D + + ++Y + +GGKR+RP+L LATA +E
Sbjct: 8 DDLRRQVEEYLAAIRFVAAETAGADG--LEEAMRYSLLAGGKRIRPVLALATARAIERDP 65
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +A A+E IHT +L+H +DD LRRG+ +G ++L GD L ++AF
Sbjct: 66 AEALPIAAALELIHTYSLIHDDLPAMDDDDLRRGRPTCHKAFGENVAILAGDGLYAEAFR 125
Query: 120 M 120
Sbjct: 126 H 126
>gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 122/323 (37%), Gaps = 55/323 (17%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++ ++ + ++I + ++Y + +GGKRLRPML T M
Sbjct: 12 EEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGGAAKTVRPFMA 71
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+H +DD RRG+ +V+G +L GD LL+ AF +
Sbjct: 72 AIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFETACTAFEE 131
Query: 128 EALEALSLVAC----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
EA+ + G + ++TE+ + + KT L +A+
Sbjct: 132 APEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSFIYELKTGALLESAM 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++AG + ++ +GIAFQ+ DD+LD +GK + D +N K T
Sbjct: 192 MIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTSTEEVLGKPVFSDQKNEKTTYV 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ L + ++A
Sbjct: 252 TLF--------------------------------------GLEKAKKDVEQISEEAIAL 273
Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320
LR L + L +++ + R
Sbjct: 274 LRSLQRENA--YLEQLLQELIHR 294
>gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 310
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 1 MKMLEDLT-------LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLR 46
M+ LE+ +D+ + +I +R+ S ++ +++++ S GKRLR
Sbjct: 1 MQELEEPATAAFPPRSRDLSFLRAVIDRRLGLLVPPAASHPAVLHAAMRHILLSPGKRLR 60
Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQ 104
P+LTLA A+ L + CA+E IH ++L+ DD+ +RR + + +G
Sbjct: 61 PLLTLAAAIQLNASEHAVLDFGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGED 120
Query: 105 TSVLVGDFLLSQAF 118
+VL LLS+AF
Sbjct: 121 VAVLASIGLLSRAF 134
>gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97]
gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987]
gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
Haarlem]
gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506]
gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475]
gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
(POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
Haarlem]
gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
Length = 350
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 35 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 94
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 95 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDE 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 155 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 214
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 215 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 275 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 331
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 332 AVRSPDLIALSQLICRR 348
>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
Length = 290
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y I GGKR+RP+L L + + + + A
Sbjct: 8 EEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAM 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLE 127
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 128 EGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 188 GAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ + L
Sbjct: 248 F--------------------------------------GLEECKKKCVNITEECIEILS 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 270 SIEGN--TEPLKVLTMKLLERK 289
>gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
Length = 302
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/325 (21%), Positives = 127/325 (39%), Gaps = 56/325 (17%)
Query: 14 KVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACA 70
++ +L + + E + V + + GGKR+RP L ATA + A A
Sbjct: 18 RIQQDLLTALEAFAIPEPLRSAVHHAVMLGGKRVRPALCYATAALKPNQNSAAVRRAAVA 77
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IEFIH +L HDD +D+ LRRG+ + +G T++L GD L S AF ++ +
Sbjct: 78 IEFIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDQ 137
Query: 129 -----------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ L+ + + G++ L + A++ +A +
Sbjct: 138 GPAVEASIVLKQMQILATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIM 197
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ I + L+ +G +G+AFQ+ DD+LD + + +GK G+D + K T P
Sbjct: 198 MAAVTIFDGTDLAIPKLREFGQAIGLAFQVQDDILDIISDTDVLGKTAGKDEQVEKSTYP 257
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ L + A +A ++
Sbjct: 258 ALM--------------------------------------GLEQAKAYAQQLHDQAINA 279
Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322
L + + LM++ F L R +
Sbjct: 280 LNHF-EGQA-EELMQITQFLLTRKS 302
>gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 362
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/345 (20%), Positives = 114/345 (33%), Gaps = 36/345 (10%)
Query: 13 EKVNFLILKR------ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRG 61
E++ + +R I + V+ + GGKR+RP + G
Sbjct: 17 EQLREYLRERRSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAFAYWGWRSVIEPADAVAG 76
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQ 116
+ + L A+E + L+HDDV+DDSA RRG F LS
Sbjct: 77 PDVLRLFSALELLQACALIHDDVIDDSATRRGLPTVHRLFTEQHHERGWLGSERQFGLSA 136
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A S A ++ + +V YL ++ + A+
Sbjct: 137 AILAGDLALSWADDIVAGADLPVDAHRRVQTVWRHIRTEVLGGQYLDIVTESSGDESVAS 196
Query: 177 LEVSSLIAGVQNSVRQA-----------------LKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ +V + G +LG+AFQL DDVL G+
Sbjct: 197 ALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHRIGNDLGVAFQLRDDVLGVFGDPA 256
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMREN 277
GK G+D R+GK T+ + A + + ++S +++ +
Sbjct: 257 VTGKPSGDDLRSGKRTVLLAEALELADASDPAAAALLRRSVGTELSDTQVRELCDAIESV 316
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
AL E R + + A D L K L E+ R
Sbjct: 317 GALAAVEQRIETLTRDALDVLAAANVHPQAKAGLSELARSAANRT 361
>gi|156044020|ref|XP_001588566.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980]
gi|154694502|gb|EDN94240.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 378
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 107/294 (36%), Gaps = 10/294 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK +R L A LE ++ ++ + +HTA+LL DDV
Sbjct: 89 KEKILFGPYDYLEAHPGKDIRKQLIAAFNEWLEVPPESLEVITKVVGMLHTASLLVDDVE 148
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A + + + +A+ + L G+
Sbjct: 149 DSSLLRRGLPVAHSIFGTAQTINSANYVYFCALQELQKLNNPQAITIYTEELLNLHRGQG 208
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L +L ED + ++ + ++ + +GI F
Sbjct: 209 MDLFWRDSLTCPTEDDYLEMVGNKTGGL---FRLAVKLMQAESKTSRDCVPLVNLIGIIF 265
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + K + ED GK + P+I + + + +
Sbjct: 266 QIRDDYQNLSSPEYSQNKGLCEDLTEGKFSFPIIHSIRAAPDNLVLLN--ILKQKPDDEQ 323
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-----KSLMEVV 314
K A M + + + G++ K + L D K K L ++
Sbjct: 324 VKKYAVAYMEQTGSFEYCRKVLNTLGERVKKLIEELDDGGDKGKGVLKILDKMA 377
>gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
Length = 291
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 13 EKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69
+V + + +DV+ + ++Y + +GGKRLRP LTLAT + ++ V A
Sbjct: 10 ARVTSYLDTHLANDVDQSTLAASMQYSVLAGGKRLRPTLTLATVEIFGGELTEDVVRAAT 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HT +L+HDD+ +D+ LRRG +G + L GD LL+ AF V + +
Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNQLP 129
Query: 128 EALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+++ + +T + ++ + KT L A+
Sbjct: 130 ATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYLHRQKTGALLRYAVLAGG 189
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+I +V++ L +G + G+AFQ+ DD++D G MGK +G+D + K T P
Sbjct: 190 IITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDVVGTTTAMGKRVGKDAADHKNTYP 245
>gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 50/329 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ + + + + + E+I + +KY + +GGKRLRP+L +L+
Sbjct: 3 FKNYLDNSKKLIESNLDIYLNELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDK 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + A AIE IH+ +L+HDD+ D+ RRGK+ +G +L+GD LL+ AF
Sbjct: 63 EKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAV 171
++ E E + + + + + + + +KT
Sbjct: 123 ILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGK 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +E++ +I R+ L + +G+AFQ+ DD+LD G+ + +GK +G D
Sbjct: 183 LMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T P ++ + E + +A +I+ E + +
Sbjct: 243 GKSTYPSLIGM--------------AESKTLLKETIAEAKMIVAEKFGVEKS-------- 280
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L+E+ D+ R
Sbjct: 281 ----------------NILLELADYIGNR 293
>gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 358
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/335 (18%), Positives = 103/335 (30%), Gaps = 36/335 (10%)
Query: 17 FLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAI 71
I + + ++ ++V +GGKRLRP + +
Sbjct: 29 DQIDEELAPVSPLMSELVGLARRFTAGGKRLRPAFCFWGHVAAGGAPADPTALLDATAGF 88
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------------------------SV 107
E +H A L+HDD++DDS RRG AA +
Sbjct: 89 ELLHVAALVHDDLIDDSDTRRGMPAAHRQLEELHHRGGGVGDPAAFGRAGAILLGDLLTA 148
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ +++ L+A+ +L V
Sbjct: 149 WSTQRFATAGLDPAAFARARWVLDAVRTDVNVGQFLDLAAEGGLAGGAGLATAEQVVEYK 208
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
L+ + +AG + L G +G AFQ DD+L G+ GK G+
Sbjct: 209 TARYTVIRPLQFGAALAGAPAQLLDGLAHVGSAVGRAFQFRDDLLGVFGDEELTGKPAGD 268
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D R K T+ V+ + +S L A ++R + A+ R
Sbjct: 269 DLRENKRTVLVV------DALHDQPRLADYLGRPLSDPELDAAREMLRSSGAVSRLNARI 322
Query: 288 YSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQRL 321
A L L + + +L +V + R
Sbjct: 323 DRDSAAALRGLSGLQITDEGRTALESLVHAAVDRQ 357
>gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 288
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E++N + + + S + ++Y + SGGKR RP+LT A A + ACA+E
Sbjct: 12 ERINKKLDECLISQGS-LTKSMRYSVLSGGKRFRPILTYAVANTFSTDLNRADSSACAVE 70
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD R + A +G ++L GD L + AF ++ + +
Sbjct: 71 LIHAYSLIHDDLPAMDDDDTRHNQPACHRKFGEAQAILTGDGLQALAFETLVNDHNISSE 130
Query: 131 EALS------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ + +AEG+ LS+ + + K A+L + + L
Sbjct: 131 MRIKLLQALTHASFEMAEGQSIDLSVVSQVIDIKTLKNMHRKKTGALLNCSIKLGALLSD 190
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L + ++G+A+Q+ DDVLD + +GK D KPT P
Sbjct: 191 QCNKKDFEILDDFSADIGLAYQIQDDVLDVLTPQSILGKKQNSDVDKNKPTYP 243
>gi|308126296|ref|ZP_05909106.2| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ4037]
gi|308110243|gb|EFO47783.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ4037]
Length = 70
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
E L + +M+E +L T +A KA L LP+S +K++L+ + ++R
Sbjct: 13 ERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVLPESEYKEALITLAHVAVKRT 69
>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
Length = 290
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y I GGKR+RP+L L + + + + A
Sbjct: 8 EEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAM 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLE 127
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 128 EGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 188 GAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ + L
Sbjct: 248 F--------------------------------------GLEECKKKCVNITEECIEILS 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 270 SIEGN--TEPLKVLTMKLLERK 289
>gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 358
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/324 (19%), Positives = 118/324 (36%), Gaps = 35/324 (10%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-----NHVLLACAIEFIHTATLLHDDV 84
+ ++V+ + GGKR+RP D + A ++E + L+HDD+
Sbjct: 35 VDELVR-FVLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL 93
Query: 85 VDDSALRRGKVAARLVWG--NQTSVLVGDFL------------LSQAFCMVIETKSQEAL 130
+DDS RRG + ++ G+ L+ A+ + S
Sbjct: 94 IDDSDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPP 153
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK--------SKTAVLFSAALEVSSL 182
EA++ L+ + + + LE+ +
Sbjct: 154 EAMARGLRPWRAMRTEVLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLELGAE 213
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + +AL+ +G ++G+AFQL DD+L G+ GK G+D R GK TL + A
Sbjct: 214 LAGADETALEALRRFGSDIGVAFQLRDDLLGVFGDPEVTGKPAGDDLREGKRTLLIAEAL 273
Query: 243 QRGTKREKNFWKST----INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + D + + ++++ +R A+ E R A +L
Sbjct: 274 ESAQGQGDQDALDLLRGVLGDENLDEKRVEQSREALRRLGAVDAVERRITELTGTAMAAL 333
Query: 299 --RCLPDSSWKKSLMEVVDFCLQR 320
L + L E+ R
Sbjct: 334 HGAGLAE-PAASRLAELAVAVTDR 356
>gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like
[Acyrthosiphon pisum]
Length = 327
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 102/286 (35%), Gaps = 8/286 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ Y++ GK++R L A L+ D ++ ++ +H ++LL DD+ D+S
Sbjct: 35 LLQPFTYIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQMLHNSSLLTDDIQDNSV 94
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG A ++G +++ +++ A + A + L G+ ++
Sbjct: 95 LRRGIPVAHSIYGVASTINAANYMSFVALERTLSLGHPMATTVYTEQVLELHRGQGMEIY 154
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
N ED + + + + L G+ FQ+ D
Sbjct: 155 WRDNYTCPTEDEYKKMTIRKTGGLFMLAIRLMQLFSDSTNDFTKLTGIL---GLYFQIRD 211
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D + + K+ ED GK + P+I A + + +V+ K
Sbjct: 212 DYCNLCLQEYSENKSYCEDLTEGKFSFPIIHAIHTRPED--KQVIHILRQRTRNVDVKKY 269
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ + T A+ + L + +++++D
Sbjct: 270 CVKLLDNYGSFEHTRKVLTQLDADARKEVENLGGNP---LMIKILD 312
>gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 356
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/313 (21%), Positives = 115/313 (36%), Gaps = 28/313 (8%)
Query: 38 IFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
+ GK +R L A ++ + L A+E +A L+HDD++D +RRG+
Sbjct: 44 FSTRGKMIRGSLVSLGAGLVAGEAPPAALPLGAAMELFQSALLIHDDIMDRDTMRRGQST 103
Query: 97 ARLVWGNQ-----------------TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ + L+ + + E + L +
Sbjct: 104 VHHYYALEAAKYGTDDAAHLGESLGICAGDVAIFLAFSLVNEAGLIAGNHHELVGLFSRE 163
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVI-----KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
++ Q+S D + L + FS L +LIAG R L
Sbjct: 164 MSIVGTAQMSDVAWSDGWGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRDLL 223
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ YG LGI FQ+ DD L GE E+GK IG D GK TL ++ + + +
Sbjct: 224 EEYGELLGILFQIRDDELGLFGESEEVGKPIGSDIAEGKKTLFYLMLKKAAEGEALSVLE 283
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-----LPDSSWKKS 309
GK ++ +++ I L E Y +KA+ L + W
Sbjct: 284 RIYGKGKAGIDEVRQIRKIAVSTGVLSSVETMMDDYKRKAEAVLDQILSFGIGREPWSGY 343
Query: 310 LMEVVDFCLQRLN 322
L +++D+ +R +
Sbjct: 344 LRQLLDYVCRRNS 356
>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
Length = 290
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y I GGKR+RP+L L + + + + A
Sbjct: 8 EEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAM 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLE 127
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 128 EGISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 188 GAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ + L
Sbjct: 248 F--------------------------------------GLEECKKKCVNITEECIEILS 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 270 SIEGN--TEPLKVLTMKLLERK 289
>gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
Length = 288
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + + + D ++ Y + +GGKRLRP+L LAT L ++
Sbjct: 2 KLKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHK 61
Query: 61 GDNH-VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 IEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
Length = 288
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + + + D ++ Y + +GGKRLRP+L LAT L ++
Sbjct: 2 KLKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHK 61
Query: 61 GDNH-VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 IEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503]
gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
Length = 350
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 35 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 94
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 95 SAAVELVHNFTLLHDDVMDGDATRRGRSTVWSVWGVGGAILLGDALHATAVRILTGLTDE 154
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 155 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 214
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A
Sbjct: 215 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ ++ ++++A +++ + A Q A +L PD
Sbjct: 275 SRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PD 331
Query: 304 SSWKKSLMEVVDFCLQR 320
+ L+ + +R
Sbjct: 332 AVRSPDLIALSQLICRR 348
>gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis]
gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis]
Length = 337
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/286 (18%), Positives = 106/286 (37%), Gaps = 5/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D
Sbjct: 21 DEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLIDDIED 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G +++ ++ L A V + EA + + L G+
Sbjct: 81 NSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATKVYTEQLLELHRGQGM 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ + E ++ + + L + G+ FQ
Sbjct: 141 EIYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFSDNKEDYSKLTAIL---GLYFQ 197
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD + + K+ ED GK PVI A + T+++ + +E
Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVR--TQKQDKQVLHILRQRTHDIEV 255
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K ++ + + T S +A+ + L + + L+
Sbjct: 256 KKYCISLLEKLGSFQYTRKVLESLDVEARAEVARLGGNPYMDRLLN 301
>gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
Length = 297
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 14/253 (5%)
Query: 7 LTLKDMEKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ ++ ILK + + + + + Y + +GGKR+RPML LAT L
Sbjct: 6 FMENQLPVLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQ 65
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E+IHT +L+HDD+ +D+ RRGK+ + T++L GD LL+ +F +
Sbjct: 66 IGLNTAVALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFAL 125
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVL 172
+ + ++ + L++ ++ + + + K KT L
Sbjct: 126 IANDSKIQNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGEL 185
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+ IA + V L + GIA+Q+ +D+ + GK D
Sbjct: 186 IRYAVFAGGQIAQASSEVATLLDDFAWAYGIAYQIQNDLQEVMWTDEARGKLNHSDAELD 245
Query: 233 KPTLPVILAFQRG 245
K T P I+
Sbjct: 246 KNTYPSIMGTNGA 258
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMDAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
Length = 288
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/329 (20%), Positives = 109/329 (33%), Gaps = 50/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M + +D + + + D + + Y GGKRLR L L +A +
Sbjct: 1 MFSERLAQDAALIQAQFDLVLGALDDVDVTRAMAYATQ-GGKRLRGFLVLESARLHGMDE 59
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE +H +L+H +DD LRRG+ W +VL GD L + AF
Sbjct: 60 TCAIWPATGIEALHAYSLVHDDLPCMDDDDLRRGRPTVHKQWNEGIAVLAGDALQALAFE 119
Query: 120 MVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLF 173
+ + A A L Q + L I +
Sbjct: 120 LCARPEVGPAEIRADLALTLAQAAGARGMVLGQALDIAAETAQQPLSLEDITRLQAGKTG 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ A + + ++ Y LG+AFQ+ DD+LD G+V + GK + +D GK
Sbjct: 180 ALIEWSGCAGARLAGENPERMRLYSRALGLAFQIADDILDVEGDVQKAGKRLQKDAEAGK 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L L + RA +
Sbjct: 240 ATFVSLL--------------------------------------GLDAAKARAAELVDE 261
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L ++L E F + R +
Sbjct: 262 ACAALDSY--GERAETLKEAARFVIARES 288
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 51/307 (16%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDV 84
++ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H
Sbjct: 30 PSVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPC 89
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC------ 138
+DD LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 90 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKA 149
Query: 139 ---TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
G ++ +T ++ ++ K KT L A+ ++++ + L
Sbjct: 150 AGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLL 209
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
++ +G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 210 TFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLFNEKSTYTTLFT-------------- 255
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 -----------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICD 289
Query: 316 FCLQRLN 322
+R N
Sbjct: 290 LIAKRNN 296
>gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 287
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 106/323 (32%), Gaps = 53/323 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+ + + + + + +++ + GGKR+RP+L A+ + D A
Sbjct: 6 IARTERSLEAALPGATLAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPA 65
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQAFC 119
++E IH +L+HDD+ + + LL+ A
Sbjct: 66 VSVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLASAPV 125
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
A + A + G+ + + + + KT L AA+ +
Sbjct: 126 SAELRVGWLQHLASAAGAGGMCGGQALDIDATG-QVQSLHALQRMHALKTGALIRAAVRM 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L + +Q + + LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 185 GALSGRAAPADQQRVDDFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKSTYP-- 242
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ + + + + D L+
Sbjct: 243 --------------------------------ALL----GMDGAKAKLAELATRMHDVLQ 266
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
P ++L + F + R +
Sbjct: 267 --PYGPPGETLATLGRFAVDRAH 287
>gi|46137163|ref|XP_390273.1| GGPP_GIBFU Geranylgeranyl pyrophosphate synthetase (GGPP
synthetase) (GGPPSASE) (Geranylgeranyl diphosphate
synthase) [Gibberella zeae PH-1]
Length = 416
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 5/281 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
++ Y+I GK R L A L+ + ++ + +H ++LL DD
Sbjct: 124 GDKESVVRGPYDYVISHPGKDFRAQLIAAFNAWLDVPAPSLEVITRVVGMLHESSLLIDD 183
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V D S LRRG A ++G ++ +++ A + + + E + S L G
Sbjct: 184 VQDSSELRRGFPVAHNIFGVAQTINSANYIYFVALQELHKLGNPELITIFSDELVNLHRG 243
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L L E+ + + + + + +G+
Sbjct: 244 QGMDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLGIKLMAEEANGPTDCVPLVNLIGL 300
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD ++ + K + ED GK + PVI + + + + +
Sbjct: 301 IFQIRDDYMNLSSKEYSHNKGMCEDLTEGKFSFPVIHSIR--SNPTNLQLINILKQKTSD 358
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
++ + A M + T ++A+ L +
Sbjct: 359 IQVKRYAVSYMESTGSFEYTRKVIMVLIERARKMAEELDEG 399
>gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
Length = 902
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 132/302 (43%), Gaps = 20/302 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
++ + KD+ + IL + + ++ + L GK+ RP + + +L
Sbjct: 32 IENVYQFIEKDLLLLTNSILNELSKNQENDSLLNKISCLLFNLKGKKTRPTVIFLLSKIL 91
Query: 58 EY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
E + ++ + LA E HTA+L+HDDV+D S RR + ++ N+ ++ GDF+L
Sbjct: 92 ENEKTKSNSFLKLAMVAEMFHTASLIHDDVIDGSDTRRDEKTVNTLYSNRMAITGGDFIL 151
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S++ ++ ++ +++S V L +GEL QL + ++ S
Sbjct: 152 SKSMVILGSIRNVRVAKSMSNVLGDLVDGELLQLQGNGLSFEKYLQKSYLKTSSMFSNCC 211
Query: 175 AALEVSSLIAGVQNSVRQA---------LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
++ + + + +G +GIAFQ++DD+LD+ + +GK
Sbjct: 212 KSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQIIDDLLDFTISSSSLGKPS 271
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D R G T PV+ A E + IN +++ A ++ +++AL T
Sbjct: 272 LADLRLGIATAPVLFATH-----EFPVLEVLINRKFSENGDVELATDLVYKSKALELTRA 326
Query: 286 RA 287
A
Sbjct: 327 LA 328
>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
Length = 291
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L+D + + I D + ++Y +GGKRLRP LTLAT +L +
Sbjct: 5 LEQLKDRVTAYLA---THLANDI--DQPTLAASMRYSTMAGGKRLRPTLTLATVEILGGQ 59
Query: 61 GD-NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D + + A A+E +HT +L+HDD+ +D+ LRRG +G + L GD LL+ A
Sbjct: 60 LDADVMRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLA 119
Query: 118 FCMVIETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F V + S+ ALE + ++ + ++ + KT
Sbjct: 120 FQWVTDNHLPAAVKSRLALELAKAAGPAGMVAGQARDIEGTGQQLSLDQLRYLHRQKTGA 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ +I V++ L +G + G+AFQ+ DD++D G +MGK +G+D
Sbjct: 180 LLRYAVLAGGIITAQPEKVQRLLAQFGASYGLAFQIYDDLMDVVGTTAQMGKQVGKDAAE 239
Query: 232 GKPTLP 237
K T P
Sbjct: 240 HKNTYP 245
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
Length = 296
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAKAKGAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|241742424|ref|XP_002414173.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215508027|gb|EEC17481.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 397
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/347 (14%), Positives = 109/347 (31%), Gaps = 49/347 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRL----------RPMLTLA 52
L L + + F + K I ++ ++ KRL R ++ L
Sbjct: 66 SLRCLLNDETSNIAFHVRKLIGTNHPVLKTA---------KRLIYNGRTNIQTRGLIVLL 116
Query: 53 TALMLEYRGDNHVLLACAI---------------EFIHTATLLHDDVVDDSALRRGKVAA 97
+ + L E IHTA L+H V++ S +
Sbjct: 117 LSKAAGHPSCRQDCLEEERVAGITQRQRSLAEITEMIHTAHLIHRGVLNLSNDQFPDATT 176
Query: 98 RL--VWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----ALSLVACTLAEGELRQLSL 150
+GN+ SVL GD+L++ A + + K+ + ++ + +Q +
Sbjct: 177 LRDLQFGNKISVLTGDYLIANASKSLTDLKNCKVVDLVATAIGDFMQSEFLGDHDQQGNP 236
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+T + T L S + + + +A + +++ +G ++G+A+Q+ D
Sbjct: 237 IPVAGMTIGHWEEKHYLSTGSLMSNSCQATLELASHDDQLQELGFEFGKSIGLAWQVHSD 296
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ + + + + + K
Sbjct: 297 LQPFVDTYRHPPGIPFVLTSAPVVLHLE--------DDASLVEEIRRHTSNVEKLDYLKL 348
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
I+ + + SY +A L +P S +L +V
Sbjct: 349 HSIIVNGEGIEKAKALLESYTSRALAVLDQIPPSEATAALRNIVQAL 395
>gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614]
gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614]
Length = 358
Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 32/339 (9%)
Query: 14 KVNFLILKRICSDVEMIPDVVK-----YLIFSGGKRLRPMLTLATALMLEYRGDN---HV 65
V+ + ++ + D + + SGGKR R + + V
Sbjct: 20 AVDAFVDEQAGQLGPLGGDAARLVREAHTSVSGGKRFRAAFCYWGHRAVAADVPDETALV 79
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLV 109
++E +H + L+HDD++D S RRG A ++ ++ ++L+
Sbjct: 80 RACASLELLHASALVHDDLMDASDTRRGHPATHRLFESEHRAAGWRGDPEQYGAAAAILL 139
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
GD LLS A ++ A A +L E+
Sbjct: 140 GDLLLSWADELLRRCGLPIAQVAPALEVFDRCRTEVIAGQFLDVSVQARGRADVETAMTV 199
Query: 170 AVLFSAALEVSSLIAG------VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
SA + + L ++G+ LG AFQL DD+L G+ GK
Sbjct: 200 LRYKSAKYSIERPLHIGAALAGAGPETMAELSAFGLPLGEAFQLRDDLLGVFGDPETTGK 259
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK T+ V LA + ++ ++VE + + I+ + A
Sbjct: 260 PAGDDLIEGKRTVLVALALDAAPPADAALLDRSLGTA-LTVEQVSELRRIIAASGAHAQV 318
Query: 284 EYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCLQRL 321
E A +L ++ L ++ QR+
Sbjct: 319 EAVITELATHAVTALDKADIHDDARRVLRQLASAATQRV 357
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 55/335 (16%)
Query: 2 KMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L + + + +++ + + Y + +GGKRLRP++ LA
Sbjct: 3 NKLTSFLADRKKTIENQLSVYTEKLDMPDS-LKKSMLYSLQAGGKRLRPLIVLAVLNAYG 61
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + + CA+E IHT +L+H +DD LRRGK V+G T+VL GD LL++
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 117 AFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+F ++ S E L G ++N VT E+ + +
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L + +++A + L+++ ++GI FQ+ DD+LD G ++GK +G
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D N K T P +L +L +++
Sbjct: 242 DTTNDKSTYPSLL--------------------------------------SLEGAKHKL 263
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++AK + L S K L E+ D R +
Sbjct: 264 DVHIKEAKRLIGGL--SLQKDLLYELCDLIAARDH 296
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum reducens MI-1]
gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum reducens MI-1]
Length = 162
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M + + K+M +V ++ S+ ++ LI +GGKR+RP L L
Sbjct: 16 MLSIFNPIAKEMAEVEKSLVALFPSNH-LLGSA-HNLIIAGGKRIRPALVLLAGKQ-GLV 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+ LA A+E +H ATL HDD++D++A RRGK AA S
Sbjct: 73 NKQVMQLAIAVEILHLATLTHDDIIDNAATRRGKPAAHFNRAFLWS 118
>gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212]
gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212]
Length = 220
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 6 DLTLKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
D +++++V I + + S + + ++Y + GGKR+RP L AT ML
Sbjct: 81 DRLKEELQQVQTRINRFLEAQFEGIESHNAPLLEAMEYALLLGGKRVRPFLVYATGQMLG 140
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116
A AIE IH +L+HDD+ LRRG + + T++L GD L S
Sbjct: 141 AEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSF 200
Query: 117 AFC 119
AF
Sbjct: 201 AFE 203
>gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
49176]
gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
49176]
Length = 307
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLL 80
++ + +++ + + Y + +GGKRLRP++ L + + + V A A+E IHT +L+
Sbjct: 26 KLGEEDKLLEEAMNYSLLAGGKRLRPLIMLEIFRLFGGKKEGLVRPFAAALEMIHTYSLI 85
Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HDD+ +D+ LRRG+ V+G ++L GD LL+ A +
Sbjct: 86 HDDLPAMDNDDLRRGRPTNHKVYGEAVAILAGDGLLNLAAETSSKAFRYCETICEY 141
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 34 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ +T + ++ KT L A+ ++++ + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ + KAKDS+ L + L+ + D
Sbjct: 257 ---------------------VDRAKSILEEKIAKAKDSISSLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026]
Length = 288
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + + + D ++ Y + +GGKRLRP+L LAT L ++
Sbjct: 2 KLKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHK 61
Query: 61 GDNH-VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 IEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ ++++ AG +S L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
Length = 297
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 34 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ +T + ++ KT L A+ ++++ + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ + KAKDS+ L + L+ + D
Sbjct: 257 ---------------------VDRAKSILEEKIAKAKDSISSLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
Length = 287
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 14 KVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + + + + + D + Y + +GGKRLRP+LTLA A + + A A+
Sbjct: 13 QIEDKLAAELAHSTSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYGLGINGLLRAASAL 72
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ +RRGK +G ++L GD L A+ +
Sbjct: 73 ELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPLAYQWLASDPLLTT 132
Query: 130 LEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ L + G++ ++ + ++ + + KT L + A
Sbjct: 133 PQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYRKTGALIAYAAIAGG 192
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLV 208
++A + V++ L ++GM G+AFQ+
Sbjct: 193 IMAHASDEVKETLWNFGMAYGLAFQIK 219
>gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 363
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/353 (17%), Positives = 118/353 (33%), Gaps = 45/353 (12%)
Query: 13 EKVNFLILKRIC------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++++ + ++ + E + + GGKRLR L + +
Sbjct: 13 QRLDKFLSDQLSYASSLGPEAETMSRAGAASL-RGGKRLRARFCLTGWRAVAESTAARTV 71
Query: 67 LACAI--------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A E A L+HDD++D+S RRG+ AA + +
Sbjct: 72 APAAAAISVAAALEIFQAAALVHDDIIDNSDTRRGQPAAHRALEAAHAAAHWAGDAAMFG 131
Query: 119 CMV---------------------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
+ + + + + G+ ++ V
Sbjct: 132 RSGAVLLGDLLVAWSDDLLEDALADQPTASATRRLYAHMRRDVTIGQFLDVAEESAYAVY 191
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAG------VQNSVRQALKSYGMNLGIAFQLVDDV 211
+D + A SA + + + AL +G ++G+AFQL DDV
Sbjct: 192 PDDQHAERALRVASYKSARYSIQKPLEIGAALAGADDDQLDALARFGHDVGMAFQLRDDV 251
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
L G+ GK +G+D R GK T+ V A + + + D + +
Sbjct: 252 LGVFGDTAATGKPVGDDLREGKRTVLVAFAREALPASTRRTVDELLGDPDLDATQIGALQ 311
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322
+ + AL TE Y ++A +L L ++ L ++ QR +
Sbjct: 312 NTIIDTGALARTEELIADYSRRADRALSGARLG-NAAVGELRDLAHAATQRSS 363
>gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
Length = 287
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 115/320 (35%), Gaps = 50/320 (15%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+++ I R+ + + + + + + + GGK LR L L +A + + + A
Sbjct: 9 LQQAQQEISARLNTIIPVGATLGKPMLHAVL-GGKMLRGFLVLESARLHGVDAEAALDAA 67
Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---MVIE 123
AIE IH +L+H +DD LRRG W T+VL GD L + AF
Sbjct: 68 VAIECIHAYSLVHDDLPCMDDDDLRRGLPTIHKKWDEATAVLTGDALQTLAFDLLADSKF 127
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSL 182
+ L L A + Q+ + L I + +++
Sbjct: 128 GPNALELIRLLARAAGRSGMVQGQMLDIDAETASTPLTLEQITRLQDRKTGCLINWSATV 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +AL Y LG+AFQ+ DD+LD G+ ++GK + +D GK T +L
Sbjct: 188 GPVIAGDDSRALWQYATALGLAFQIADDILDIEGDAEKVGKALRKDADAGKATFVSLL-- 245
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
L + RA +A +L P
Sbjct: 246 ------------------------------------GLEPAKQRARDLIDEACAALA--P 267
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
++L + F + R +
Sbjct: 268 YGEAGETLKQAAHFVIARDS 287
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium adolescentis ATCC 15703]
gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
L2-32]
gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium adolescentis ATCC 15703]
gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
L2-32]
Length = 362
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 28/305 (9%)
Query: 41 GGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GGKRLR +LTL E D + LACAIE T L+HDD++DDS LRRGK
Sbjct: 51 GGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDIIDDSDLRRGK 110
Query: 95 VA--------ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+ ++ +L+ A + + S+V+ L
Sbjct: 111 PSAHRALATDTHSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMHREV 170
Query: 147 QLSLSKNLDVTEEDYLH------------VIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
++ +L V K+ + + R+
Sbjct: 171 EIGQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAPADARRLA 230
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ G+ LG+AFQL DD+LD G GK +G D R GK T+ + A + E+
Sbjct: 231 LAIGLPLGLAFQLADDLLDVIGSSRNTGKPVGGDIREGKRTVLLADAIEAAGDVERRELI 290
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL--ME 312
++++A + A+ ++ R ++K ++ L S +K +
Sbjct: 291 DMWEAESRDEAHVRRAIALFESTGAIARSKERIAGLWLESKAAIETLELSQDRKDMLTEA 350
Query: 313 VVDFC 317
F
Sbjct: 351 CARFV 355
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------IDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
Length = 280
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M + + + + + Y + +GGKR+RP L + + A A
Sbjct: 1 MNSFEEYLQNCLNDIKDSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAA 60
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+HDD+ LRRG+ + + T++L GD LL+QAF V+++ +
Sbjct: 61 IEMIHTYSLIHDDLPAMDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATA 120
Query: 129 AL-------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + A + G++ L DV+ E V + KT L + L ++
Sbjct: 121 SQLVSLESLISSYSGANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAA 180
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++A + KS G +G++FQ+ DDV D E+GK+I D N K T +L
Sbjct: 181 VLAN-HEEDFEVWKSIGYAMGLSFQIQDDVFDVTSTCEELGKDIMSDAGNHKSTYVSLLG 239
Query: 242 FQRGTKREKNFWKSTIND 259
+R T+ + ++
Sbjct: 240 VERATQLAQEYYDQAWQH 257
>gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
Length = 372
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/354 (17%), Positives = 113/354 (31%), Gaps = 41/354 (11%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-----R 60
+ +E++ + + ++ V + + SGGKRLR +
Sbjct: 19 AVLADHVERLRRELEPTGDDTLPLVDAVAR--MLSGGKRLRAAFCWWSWRAHGGVPGTPE 76
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL------------ 108
V + A+E A L HDDV+D+S RRG +A +
Sbjct: 77 AGTVVRVGAALELFQAAALFHDDVMDESDTRRGMPSAHRAFEAMHVERGLSGDVRQFGMS 136
Query: 109 -----------VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
+ + A ++++ + L+ + G+ +
Sbjct: 137 AAILLGDLALVASEQEFASALADAPTSRARRSRAVYDLMRTEVTVGQYLDVLAQSLPWGD 196
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIA------GVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ D SA V + + A + G+ LG AFQL DD+
Sbjct: 197 DPDADESRARAVIRAKSARYSVEHPLTLGAALADADDESLAACRQVGLPLGEAFQLRDDL 256
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLP----VILAFQRGTKREKNFWKSTINDGKISVENL 267
L G+ GK G+D R GK T+ + A G + + D +S +
Sbjct: 257 LGVFGDPGATGKPAGDDLREGKRTVLVARTLRRARAAGDDATVRLLRENLGDRGMSAGTI 316
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
+ + + A+ D E +A + L L ++ + R
Sbjct: 317 DRLAGAIASSGAVEDVEQTIAELSDRAFTRMAELDWQEPAAGRLAQLAHAAVDR 370
>gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895]
gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895]
Length = 475
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+G NLGI FQLVDD+LD+ E+GK +G DF G T PV+ A++
Sbjct: 352 CYHFGKNLGICFQLVDDMLDFT-TSGELGKPVGADFELGIATAPVLFAWKEDPSLGPIIQ 410
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLME 312
++ G ++ +A + ++ + T A Y KA +L LP+S + +L
Sbjct: 411 RNFSQPG-----DVARALEAVHQHDGIKKTAEVAREYRDKALHNLRAALPESDSRAALEF 465
Query: 313 VVDFCLQR 320
+ + L R
Sbjct: 466 LTNSILTR 473
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L +M+ ++ I + I S ++ V Y SGGK++RPML L + L
Sbjct: 53 LVSDEMKTLSKNIARLIGSGHPVLNRVTSYYFDSGGKKVRPMLVLLLSRALSEIP 107
>gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis CCUG 52486]
gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 366
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRG+
Sbjct: 58 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 117
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 118 SAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 177
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 178 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 237
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 238 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 297
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 298 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 357
Query: 314 VDFC 317
F
Sbjct: 358 ARFV 361
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKAILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 360
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRG+
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFV 355
>gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium
longum DJO10A]
gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
DJO10A]
gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
DJO10A]
gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
Length = 360
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRG+
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFV 355
>gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S]
gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S]
Length = 373
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/351 (18%), Positives = 118/351 (33%), Gaps = 46/351 (13%)
Query: 13 EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTL-----ATALML 57
+ V + + S + ++ + GGKR+RPM A
Sbjct: 24 DTVEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDAT 83
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----LVWGNQTSVLVGDF 112
+ A A+E + L+HDD++D S RRG + S +F
Sbjct: 84 GPEAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEF 143
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI------- 165
+ A + + A+ + + + +V +L +
Sbjct: 144 GRAVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGDE 203
Query: 166 ----------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
A L + + +AG +++ A +++G ++GIAFQL DD+L
Sbjct: 204 TVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGVF 263
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFII 273
G+ GK G+D R GK T+ A QR + +S + +
Sbjct: 264 GDPEITGKPSGDDLRAGKRTVLFAEALQRADASDPAAAALLRESIGTDLSDAQVATLRSV 323
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS----LMEVVDFCLQR 320
+ + A+ D E R A +L S+ L E+ +R
Sbjct: 324 ITDLGAVDDAERRISELTDSALSALDG---STATDEGKLRLREMAIAVTRR 371
>gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
Length = 299
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 58/338 (17%)
Query: 4 LEDLTLKDMEK--------VNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
+ DL KD+ + V + + + + + ++Y GKRLRP L
Sbjct: 1 MNDLAPKDLARRIVQAADIVTVALDELLPRADGPESRLTEAMRYAALGPGKRLRPFFALE 60
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
T M + + ACA+E IH +L+H +DD +RRG+ + T++L G
Sbjct: 61 TGKMFDLAERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAG 120
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACT------LAEGELRQLSLSKNLDVTEEDYLHV 164
D L + AF ++ + + S + Q+ + +
Sbjct: 121 DALQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGARGMVGGQMIDILGVRDDLGAVARM 180
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ KT L + A E+ +IA + S R AL ++ +LG+A+Q+VDD+LD G+ +GK
Sbjct: 181 QRLKTGALIAFAFEIPLIIARAKESERHALMAFAQDLGLAYQIVDDILDAEGDEKTLGKA 240
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
GK + + ++ L +
Sbjct: 241 ---------------------------------AGGKDAAKGKANYVTLL----GLDAAK 263
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
R ++ + L + L E VDF L R N
Sbjct: 264 ERVTLLAEQTRSHLEIF--GERAEHLRESVDFVLDRRN 299
>gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 120/277 (43%), Gaps = 21/277 (7%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ LA +E +HTA+LLHDDV+D S LRRG +A +G++ SVL G+F+L +A +
Sbjct: 163 PTQLRLAQIVEMLHTASLLHDDVIDASPLRRGAPSAPSKFGSKLSVLGGNFILGRASTAL 222
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E + ++ V L EGE+ Q+ K+ DV E +
Sbjct: 223 ARLGDAEVTQLIASVISNLVEGEILQMRDVKDKDVGVEGKTKNAWTVYLQKTYLKTASLM 282
Query: 182 LI----------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM------GKNI 225
+ +YG NLGIAFQL+DD+LDY GK
Sbjct: 283 AKGARSAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYESTSTPGSADLTLGKPG 342
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + G T P + A+ E I +++ A ++ + + T+
Sbjct: 343 GADLQLGLATGPALYAW-----EEFPEMGELIGRKFEGPGDVEMARSLVHRSSGVHRTKL 397
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + +KAK+ L LP+S K L+ + + + R +
Sbjct: 398 LAKEFAEKAKEVLDELPESVAKNGLVALTEKVVGRRS 434
Score = 42.2 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S + ++ KY K +RP++ L + + + + + + L D
Sbjct: 43 SGNPTLSELTKYYFLHPSKHIRPVIVLLFSQATNG-----LGRSWPRKLLESKDLDLDRP 97
Query: 85 VDDSALRRGKVAARL 99
+ + A
Sbjct: 98 LTRPDVLNDWNPAMQ 112
>gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489]
gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489]
Length = 362
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 17/283 (6%)
Query: 20 LKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEF 73
+ I S +I + + L+ GGKR RP+L + A + LLA +EF
Sbjct: 35 NENIDSKHIFPLI-ETTRSLVDLGGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEF 93
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------ 127
+HTA+L+HDD+ D S +RRGK AA + +G T++ G +L +A + +
Sbjct: 94 VHTASLIHDDIEDSSPVRRGKPAAYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNR 153
Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ + L L + + ++YL ++K KT L S A + +L +
Sbjct: 154 LYSNYLMELRRLHLGQAMDIAWHRDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTLASNA 213
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE---DFRNGKPTLPVILAFQ 243
+ +G FQ++DDV++ + T
Sbjct: 214 DEETVKKAGIIASEIGAGFQIIDDVINLTTGNPGKKRGDDIVEGKKSLPVLTFFEQNKKN 273
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
+E + + I ++KA +M +N ++ + +
Sbjct: 274 PQKTQELSQCFIQASKEGIESPAVEKAITLMEQNSSIEIAKKK 316
>gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
Length = 288
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMI--PDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D K +++ + + + ++++ + ++ Y + +GGKRLRP+L LAT L ++
Sbjct: 2 KLKDFQEKYTPQIDNFLKEHLVTEIDNLTFSKIMSYSVMAGGKRLRPLLFLATLETLNHK 61
Query: 61 GDNH-VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL
Sbjct: 62 IEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLG 121
Query: 118 FCMVIETKS-----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ E + +A+ + + + + + + KT L
Sbjct: 122 IQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQMEWLKTGCL 181
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G
Sbjct: 182 IEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241
Query: 233 KPTLP 237
K
Sbjct: 242 KNNTL 246
>gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264]
gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH]
gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4]
gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264]
gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264]
Length = 294
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+E+V + + ++ + + ++Y + GGKR+RP+L A + +
Sbjct: 11 LERVETALGHYLPAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAAS 70
Query: 69 CAIEFIHTATLLHDDVVDDSA 89
A+E IH +L+HDD+
Sbjct: 71 SALEMIHVYSLVHDDMPCMDD 91
>gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum]
Length = 371
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/340 (21%), Positives = 131/340 (38%), Gaps = 30/340 (8%)
Query: 12 MEKVNFLI----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ V + + + I ++V + + GK +R + +
Sbjct: 31 LGAVTEFLDTHCREALYGAHVDITELVLRGMLAEGKCVRSTYLYLGWQCGAPADEAALRA 90
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVGD 111
A ++E +H LL DDV+D+S +RRG+ +A + +VL+GD
Sbjct: 91 AASLELLHAFALLQDDVMDESPMRRGRPSAHRAFERWHRERGLPGSSARFGESAAVLLGD 150
Query: 112 FLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
L A M+ E+ A + LA G+ L ++ L V +
Sbjct: 151 LCLVWAEQMLRESGVDEAALTRAWPRYDAMRTELAVGQFADLVNDTAGFPQLDEVLDVAR 210
Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
K+ LE+ + +AG V L YG +G AFQL DD+L G GK
Sbjct: 211 RKSGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRDDLLGVFGAPQTTGKPT 270
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D K T V+ ++ T ++ +K + ++S ++ + ++ E + E
Sbjct: 271 GTDLVARKATTVVVAGYELATGAQQRQFKEFMTAPELSSGDVTRWQALISEVGTVQRIED 330
Query: 286 RAYSYGQKAKDSLRCLP----DSSWKKSLMEVVDFCLQRL 321
+ A +L L D+ + +L+ + C +R+
Sbjct: 331 MIHRRFAVAVQALDSLDATRLDADARSALVAMASACTERI 370
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K K L A+ ++++ + L ++
Sbjct: 153 EGMVGGQVADMEAEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEEKLLTFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E +AK ++ L + L+ + D
Sbjct: 256 --------VDRAKDILEET-------------IAEAKGAISSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23]
gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1]
gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23]
gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 291
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/321 (19%), Positives = 113/321 (35%), Gaps = 51/321 (15%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + + + ++Y + SGGKR+RP+L A + + A
Sbjct: 11 QRTDSYLERTLSIPTQAPQRLQAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF + + +
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPAD 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSS 181
+L L T A G + K+ L AA+ + +
Sbjct: 131 TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 191 LAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFP---- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ A + A +
Sbjct: 247 ------------------------------ALLSVEGAKCYLQELAERLYTQLH------ 270
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P L + ++R +
Sbjct: 271 PYGERAAPLTALARLAVERAH 291
>gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
Length = 360
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/318 (19%), Positives = 109/318 (34%), Gaps = 34/318 (10%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN-----HVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GGKR+RP + D+ + E +H + L+HDD++D S R
Sbjct: 45 YVLRGGKRVRPTFAWLGWIGAGGDPDDPVAPAVLRACAGFELLHASGLIHDDIIDASRTR 104
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
RG AA +V+ + + AL ++ Q L
Sbjct: 105 RGHPAAHVVFAERHRMRRFSGDPGAFGAGAAILVGDLALVWSDVMVRASGLPADAQTRLG 164
Query: 152 KNLDVTEEDYLH----------------------VIKSKTAVLFSAALEVSSLIAGVQNS 189
+ ++ + L+ + IAG
Sbjct: 165 PVWSAVRYEVMYGQLLDLISQASDEEGVDAALLVDQYKTASYTVERPLQFGAAIAGADAG 224
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA--FQRGTK 247
+ A +++G ++GIAFQL DD+L G+ GK G+D R GK T+ + A
Sbjct: 225 LVDAYRAFGADIGIAFQLRDDLLGVFGDPAVTGKPSGDDLREGKRTVLLATALKRADACD 284
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-- 305
+ ++ ++L +A ++ + A+ E +A L S+
Sbjct: 285 PRAAAFLRATIGTDLTGDDLARARAVLTDVGAVQHIEREIERRADQAVAVLEA--SSATG 342
Query: 306 -WKKSLMEVVDFCLQRLN 322
K+ L + QR +
Sbjct: 343 FAKQQLAALATKATQRAH 360
>gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
Length = 366
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 67/358 (18%), Positives = 120/358 (33%), Gaps = 42/358 (11%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE---MIPDVVKYL---IFSGGKRLRPMLTLATA 54
+ + D+ + + + + R + V + + + YL + +GGKR+RP+ A
Sbjct: 11 LDQIPDVVRERLTRF---LDDRAANVVAIGGPVTEALSYLRDFVLNGGKRIRPLYVWAGF 67
Query: 55 LMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
+ + G + + A ++EFI L+HDD++D S RRG + +
Sbjct: 68 VAAQGPGRSSEDINAVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVESMHGAV 127
Query: 109 -----VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
F S A A R +V L
Sbjct: 128 GLEGDAAHFGESVAILAGDMALVWAEDMLQDSGLSAAALARARDAWRGMRTEVIGGQLLD 187
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALK-----------------SYGMNLGIAFQ 206
+ A + ++ + L +YG ++GIAFQ
Sbjct: 188 IYLEAQASESVELANSVNRFKTAAYTIERPLHLGASLAGGAPELIDALRNYGRDIGIAFQ 247
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISV 264
L DD+L G+ GK G+D R GK T+ + LA QR + + +
Sbjct: 248 LRDDLLGVFGDPAVTGKPAGDDIREGKRTVLLALALQRADAEDPEAAAAIRSAIGKVTDP 307
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQR 320
+ + ++R A + E L +PD ++ L + +R
Sbjct: 308 AEITRIAGLIRATGAEDEVEEHISRLTASGLAHLEIAGIPD-EVREQLRHLAIRATER 364
>gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68]
gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68]
Length = 360
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFV 355
>gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum NCC2705]
gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase
[includes: farnesyl pyrophosphate synthetase (Fpp
synthetase) (dimethylallyltransferase);
geranyltranstransferase ] [Bifidobacterium longum
NCC2705]
Length = 372
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 64 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 123
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 124 SAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 183
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 184 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 243
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK +G D R GK T+ + A +K +
Sbjct: 244 AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIA 303
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 304 IFEEDCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 363
Query: 314 VDFC 317
F
Sbjct: 364 ARFV 367
>gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
Length = 303
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/328 (22%), Positives = 125/328 (38%), Gaps = 51/328 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ DL +++ +L R + + ++Y GKRLRP + MLE
Sbjct: 19 EIADLVTVALDQ----LLPRADGPEARLTEAMRYAALGPGKRLRPFFAIEAGRMLEVEER 74
Query: 63 NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ ACA+E +H +L+H +DD +RRG+ + + T++L GD L + AF +
Sbjct: 75 AALRAACALECVHAYSLVHDDLPAMDDDDVRRGRPTLHIAYDEATAILAGDALQTAAFDI 134
Query: 121 VIETKSQEALEALSLVACTLAE------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+++ + + +A L+ Q+ + + + KT LF+
Sbjct: 135 ILDEDTHDDAVVRCELARRLSFASGARGMAGGQMIDLMGVRDDLGGVARMQRLKTGALFA 194
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A E+ +IA + AL S+ ++G+A+Q+VDDVLD G EMGK G
Sbjct: 195 YAFEIPLIIADANEAAWHALTSFAHDIGLAYQIVDDVLDAEGSAEEMGKAAGGKDAALGK 254
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T V L + R +A
Sbjct: 255 TNFVTLL-------------------------------------GVDAARQRVAHLADQA 277
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ L + L VDF L+R +
Sbjct: 278 RSHLDLF--GHEAEILKASVDFVLKRRS 303
>gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 355
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 96/274 (35%), Gaps = 22/274 (8%)
Query: 37 LIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+ +GGKRLRP+ V A A+E H L+HDD++D S RRG+
Sbjct: 47 FVLAGGKRLRPLFCYWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDILDGSDRRRGEP 106
Query: 96 AARLVWGNQTSVL-VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ ++ + + + + A + + + E +
Sbjct: 107 SVHRIFADLHTRSSWRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRGYAVFS 166
Query: 155 DVTEEDYLHVI--------------------KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ E + L++ + +AG + + AL
Sbjct: 167 LMRTEVIAGEYLDLVSGVGGGSVASALTVIRMKAARYTVTRPLQIGATLAGASSELVDAL 226
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G LG AFQL DDVL G+ GK+I +D R GKPT+ + LA + + +
Sbjct: 227 AEFGDPLGDAFQLRDDVLGVFGDPAVTGKSILDDLREGKPTVMMALARDAANRAQSARLR 286
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ + E + I+ A E
Sbjct: 287 ELFGNPDLDAEGAAELREIIESTGARTTIEQMIQ 320
>gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
Length = 271
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 5/221 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++ K ++ + + I + E + +V KY++ GGKRLR L + L
Sbjct: 1 MNEIQRALEKWRNIIDKELEELIKNTYEERVINVAKYIVN-GGKRLRGALVMLVNEALGG 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
++ + A A+E +H ++L DD++D +RRG+ +A + G +V+V + L+ A
Sbjct: 60 NPEDALPAALALELVHASSLSIDDIIDLDFVRRGRPSAWVAKGVANTVMVSNLLIPHAIM 119
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+V + + + + + + + I A
Sbjct: 120 LVKRYGKRAIDKVVEVWWEVSKGEV---WDVHGPPEGKGVEAYEAIIEAKTASMFALSAY 176
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+A + + L YG LG A+Q+ DD+ D G+ +
Sbjct: 177 LGGLAAGEEERLEGLWRYGFLLGKAYQIADDLKDVEGDASF 217
>gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-1A-US]
gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-3A-US]
gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-1A-US]
gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-3A-US]
Length = 289
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAI 71
++ + K + S+V+ I ++ Y + +GGKRLRP+L LAT L + + V +AC I
Sbjct: 15 IDDYLAKHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRIACGI 74
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +
Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSNSAQ 134
Query: 130 -----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+A+ + + + ++ + + KT L A++E++++ A
Sbjct: 135 LVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINKMEWLKTGCLIQASVEMAAIFA 194
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + L + G ++Q+ DD++D E GK +D GK
Sbjct: 195 KASDIEKVKLIDFAKVFGRSYQIYDDLVDVVETSEEAGKATHKDEAEGKNNTL 247
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 52/320 (16%)
Query: 13 EKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+VN + S +++ D +KY + GGKR+RP L L T + + + + +AC
Sbjct: 8 EEVNVWLNNYFENKGSYNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMAC 67
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL++A ++
Sbjct: 68 AIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLN 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-------FSAALEVS 180
+ AL + + + +D+ E I + + + +
Sbjct: 128 NDIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKYMHKNKTGKLIKSPIIAG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ L+ +G LG+AFQ+ DD+LD G+V +GK I +D N K T
Sbjct: 188 AILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNKTTFISEF 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + ++ + L+
Sbjct: 248 --------------------------------------GLESCKKMCIDLTKECLNLLKQ 269
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
+ + + L E+ F ++R
Sbjct: 270 IQGN--TRELEEITKFLMKR 287
>gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
Length = 389
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/351 (18%), Positives = 118/351 (33%), Gaps = 46/351 (13%)
Query: 13 EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTL-----ATALML 57
+ V + + S + ++ + GGKR+RPM A
Sbjct: 40 DTVEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDAT 99
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-----LVWGNQTSVLVGDF 112
+ A A+E + L+HDD++D S RRG + S +F
Sbjct: 100 GPEAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEF 159
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI------- 165
+ A + + A+ + + + +V +L +
Sbjct: 160 GRAVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGDE 219
Query: 166 ----------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
A L + + +AG +++ A +++G ++GIAFQL DD+L
Sbjct: 220 TVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGVF 279
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFII 273
G+ GK G+D R GK T+ A QR + +S + +
Sbjct: 280 GDPEVTGKPSGDDLRAGKRTVLFAEALQRADASDPAAAALLRESIGTDLSDAQVATLRSV 339
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS----LMEVVDFCLQR 320
+ + A+ D E R A +L S+ L E+ +R
Sbjct: 340 ITDLGAVDDAERRISELTDSALSALDG---STATDEGKLRLREMAIAVTRR 387
>gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia
pastoris CBS 7435]
Length = 489
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+G NLG+ FQ+VDD+LDY ++GK G D + G T P++ A++
Sbjct: 364 NNCYRFGRNLGLCFQIVDDMLDYTTTAEQLGKPAGADLQLGLATAPILYAWKNDPSLGP- 422
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
I +++ A + +N + T A Y +A ++LR LP+S + L
Sbjct: 423 ----LIARNFSKPGDVETAKTAVIKNDGVEKTRVLASKYRDQALEALRTLPESGARSVLE 478
Query: 312 EVVDFCLQRL 321
V + L R
Sbjct: 479 FVTNSVLTRT 488
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ +M + I + + S + V Y + GK++RP++ L + + +
Sbjct: 56 SIVSNEMSTLAKNIARIVGSGHPTLNRVSSYYFEADGKKIRPLIVLLLSRAVSCIPE 112
>gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
Length = 145
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVL 66
KD+++V I K I + + VK LI +GGK LRP L +A +Y D V
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVS 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L F
Sbjct: 73 IAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFK 125
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILDET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
Length = 450
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG-EDFRNGKPTLPVILAFQRGTKRE 249
A ++G N+GIAFQLVDD+LD+ GK G D + G T PV+ A+Q+
Sbjct: 321 CDAAYTFGRNVGIAFQLVDDMLDFHATTEAFGKPSGGADLKLGLATAPVLYAWQQYPDSP 380
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
++++A ++ ++ + T A + A+ +L LP S + +
Sbjct: 381 LGTMVQ---RRFSEPGDVEQALSLVHKSEGMQRTAALARYHADVAQHALSMLPPSDARAA 437
Query: 310 LMEVVDFCLQR 320
L + + R
Sbjct: 438 LETLNQQIITR 448
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
D+ +D+ + I + S + + KY + GK +RPM+ L +
Sbjct: 23 DVVGQDLSSLRHNIAALLGSGHPSLDKIAKYYFAAEGKHVRPMIVLLMSKATNG 76
>gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
Length = 298
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 16/310 (5%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ V I + I + +V+ Y F GKRLR L L A G + V A
Sbjct: 2 LNAVERKIEQFIVELDD--KEVMGLYAKFPQGKRLRAKLILKIA----GNGLSVVKTAAV 55
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A+LLHDDV+DD+ RR K + ++GN+T++++GD L S+ F + S E
Sbjct: 56 VEMIHAASLLHDDVIDDAYTRRSKPSLNALYGNKTAIMLGDILYSKGF-FELNNISSEVA 114
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S L+ GEL+ +SLSK + +E YL +I KTA + A +
Sbjct: 115 KIVSNAVTQLSLGELKDVSLSKIFNTDKEIYLDMIYQKTAS---LIEASAGAAAVLAGKP 171
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
++A +YG NLG+AFQ++DD+LD + +GK DF GK TLP I ++ + E+
Sbjct: 172 KEAYMTYGRNLGMAFQMIDDLLDITSDAVTLGKPALHDFVEGKTTLPYIYLYEALEQEEQ 231
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
S ++S + + M E++ L+ +A ++A + L +S+ +++L
Sbjct: 232 QKLASLHAK-ELSDTDQSWIKMKMEEHQILLKCYAQAKELIEEAVE----LMNSNGEEAL 286
Query: 311 MEVVDFCLQR 320
++ ++R
Sbjct: 287 SDIALEMIER 296
>gi|307173809|gb|EFN64587.1| Decaprenyl-diphosphate synthase subunit 2 [Camponotus floridanus]
Length = 350
Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 31/336 (9%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR-----PMLTLATALML 57
L L ++ V + K + S+ ++ K +I++G R ++ L +
Sbjct: 16 SLRWLLSDEIANVALHLRKLVGSNHPLLKTA-KSIIYNG----RNTQVFGLIILLISKAA 70
Query: 58 EYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ V LA E I + L+H +V+ + ++ N
Sbjct: 71 GHLNAKPVEEDKAAGVLHSQRALAEVTEMIRISNLIHRGLVNIN--TNEALSVESSELNN 128
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ LL + + +L LV + + + + +
Sbjct: 129 MTFGNKIALLCGDYLLSNSCAELASLRNQDLVFLISSAVKDLCQAEFVACRDNQNFPIPS 188
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE----VNE 220
I + ++ + G + + ++ ++ G + ++ + +
Sbjct: 189 IPPENRTGYALKEWTLLNVYGAGSLLGKSCEATLQLAGHSKEIQTEGYKFGKHLALAWQA 248
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIMRENR 278
++ + + A + ++ G SVEN+ K I+
Sbjct: 249 SLDLGLCINKDKEILHNLCAAPIMFHVEHDPSILTELDKGLESVENIDYLKVLEIVAAGP 308
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ T+ + QKA + L +S +K+L ++
Sbjct: 309 GIGLTKELIKEHSQKAMEVLNVFKESDARKALSNII 344
>gi|49409613|gb|AAT65717.1| geranylgeranyl diphosphate synthase [Aspergillus flavus]
Length = 340
Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 7/280 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
++I V YL+ GK +R L A L D ++A + +HTA+LL DD+
Sbjct: 52 KEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQ 111
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ ++ A + E +A E + L G+
Sbjct: 112 DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQG 171
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L + TEE+Y+ +I +KT LF A+++ +++ V LG+
Sbjct: 172 MDLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKL----MQLESEVTSDFLGLVDLLGVI 227
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K ED GK + +I + ++ + SV
Sbjct: 228 FQIRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLIIHSINSNPGNQQLLNILRQRSEEESV 287
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K A +R + + R S+ +AK + L D+
Sbjct: 288 --KKYAVEYIRSTGSFAYCQDRLASFLHEAKMMVNVLEDN 325
>gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537]
Length = 292
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M LE K KV+ + + + E + ++KY + +GGKRLRP+LTLA
Sbjct: 1 MTELEKFINKWRPKVDQQLEQDLNQATLDEDLNAMMKYAVLNGGKRLRPLLTLAVVQSFG 60
Query: 59 Y-RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A A+E+IH+ +L+HDD+ +RRGK + ++G +LVGD LL+
Sbjct: 61 RTITADILKAASAVEWIHSYSLVHDDLPAMDNDTMRRGKPSVHALFGEANGILVGDALLT 120
Query: 116 QAF 118
AF
Sbjct: 121 GAF 123
>gi|301103047|ref|XP_002900610.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
T30-4]
gi|262101873|gb|EEY59925.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
T30-4]
Length = 296
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 111/297 (37%), Gaps = 8/297 (2%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
+ + + + + Y+ GK +R + A L + + ++ +H A+
Sbjct: 1 MASTVQENESKLLEPYAYISELPGKNVRGRMIGAFQSWLRAPTEAVESIQSIVDQLHNAS 60
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
LL DD+ DDS +RRG+ A ++G ++ +++ + + AL+ +
Sbjct: 61 LLIDDIEDDSEMRRGQPVAHHIFGVPATINCANYVYFLSLQKCQALGNPRALQVYTDEML 120
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L +G+ + +L D + +
Sbjct: 121 RLHQGQGLDIFWRDHLQCPTVDEYLEMVQNKTGGLFRLAVGLM---QAFSDSTMDFTPLV 177
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
L + FQ+ DD ++ E K+ ED GK + P+I+A + + S +
Sbjct: 178 NALAVYFQIRDDYVNLLDEAYMENKSFCEDLTEGKFSFPLIVAIR--ENPQDTRLLSILK 235
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
S+ + A +RE A+ T + + Q+ ++ + L + +L ++V+
Sbjct: 236 QRTKSLNLKQYAVQYLRETGAVELTLAKLNATVQEIRNEIASLGGNP---ALEQIVE 289
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
Length = 297
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+H +DD
Sbjct: 34 LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ + +E +
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ +T + ++ KT L A+ ++++ + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ + KAK S+ L + L+ + D
Sbjct: 257 ---------------------VDRAKSILEEKIAKAKASISSLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
Length = 301
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y I GGKR+RP+L L + + + + A
Sbjct: 19 EEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAM 78
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 79 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLE 138
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 139 EGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 198
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 199 GAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 258
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ + L
Sbjct: 259 F--------------------------------------GLEECKKKCVNITEECIEILS 280
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 281 SIKGN--TEPLKVLTMKLLERK 300
>gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
ulcerans Agy99]
gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
ulcerans Agy99]
Length = 340
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 30/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I D + ++ + SGGKRLRP+ + E + +LL A+E +H
Sbjct: 9 AYIGDDYGALTAWLEEFVLSGGKRLRPIFAYRGWPAVTTEDPDPDLLLLFSALELLHAWA 68
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQT---SVLVGDFLLSQAFCMVIETKSQEALEALSL 135
L+HDDV+D S+ RRG+ A + + + L + ++I +Q + +
Sbjct: 69 LIHDDVIDASSTRRGRPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIIS 128
Query: 136 VACTLAEGELRQLSLSKNLDVTEED----------------------YLHVIKSKTAVLF 173
+ Q + + +
Sbjct: 129 RVSQSSLSPDAQRRVQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTV 188
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
S L++ + A + V++A +G +LG+AFQL DDVL G+ GK G+D R+GK
Sbjct: 189 SRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAMTGKPSGDDLRSGK 248
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T+ + A + + + +++ + + ++ AL E R
Sbjct: 249 RTVLIAEAAALADRSDPKAANLLRSAVGSELTDSQVGELREVIVRVGALAAAENRNAGLT 308
Query: 292 QKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
++A +L +P ++ K L + R
Sbjct: 309 RRALATLESIPINASAKAGLSALARTATDRS 339
>gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
Length = 300
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---------VEMIPDVVKYLIFSGGKRLRPMLTL 51
M L+ K + VN + + +D E + +++ + +GGKR+RP L +
Sbjct: 1 MADLKLQMAKIADAVNGWLDVELNADSAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVV 60
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLV 109
+A + D+ + ACA+E +H+ +L+H +DD LRRG+ + ++L
Sbjct: 61 ESAALFGVSLDDALPTACALECLHSFSLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILA 120
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------TEEDYL 162
GD L + AF ++ S +A L + + LD+ T+ +
Sbjct: 121 GDALSTLAFDILASRSSADAAVRCELTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIR 180
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT L A E +++ G ++ R AL+SYG +G+AFQL DD+LD + +G
Sbjct: 181 TLQAMKTGALIRFACEAGAVLGGADDAARAALRSYGETVGLAFQLADDILDVTADTATLG 240
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D K TL + +
Sbjct: 241 KTAGKDLDADKGTLVALH--------------------------------------GVDA 262
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A ++L + L + F +R +
Sbjct: 263 VRDMLGEAVAQAHEALGGF--GAEADGLRAMATFIAERKS 300
>gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
Length = 329
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 33/327 (10%)
Query: 16 NFLILKRICSDVEMIPDVVKYLI---FSGGKRLRPMLTLATALMLE-------------- 58
+ I S E + + Y + G R A
Sbjct: 12 EPFLRNIIGSLAEPLATMAGYHFGWWDANG---R-----DAAETSGKSLRAALAFGAARA 63
Query: 59 -YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E IH TLLHDDV+D + RRG+ VWG ++L+GD L + A
Sbjct: 64 CGDAREAAPAAAAVELIHNFTLLHDDVMDGDSTRRGRATVWRVWGVNNAILLGDALHALA 123
Query: 118 FCMVI----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + + A+ L L G+ + S + VT DYL + KTAVL
Sbjct: 124 IRTLTDSLGQGVAVNAITRLEQTCLDLCVGQHQDCSFERCTTVTVPDYLRMAAGKTAVLM 183
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ A + ++ A + A++ +G LG+AFQ+VDD++ G+ GK +G D + K
Sbjct: 184 ACACALGAVSARADAATVAAVERFGYELGLAFQIVDDLIGIWGDPARTGKPVGSDLASRK 243
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
TLP+++A + + +D ++ + A ++ ++ A +
Sbjct: 244 ATLPIVVALSSDCEAALELARLYRSDHAMTHREVVHAAELVETAGGRQAAQHFADERMRA 303
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A +L P+S L+ + + R
Sbjct: 304 AIAAL---PESMRCSELVALAQLVIDR 327
>gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
Length = 309
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLA-TALML 57
M L + + K+ + + + S +++ Y + +GGKRLRPMLTLA A
Sbjct: 1 MTKLTAFQSEWLPKIEQQLKQDLGVASRDSDFSEMMSYAVLNGGKRLRPMLTLAVVASFG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
+ + + +A A+E++H +L+HDD+ +
Sbjct: 61 QKITPSILKVATAVEWVHAYSLVHDDLPAMDNDLFRRGKP 100
>gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
Length = 335
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 28/330 (8%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGD 62
+D+EKV ++ ++ +VE + + LI + GK +R ++T+ Y +
Sbjct: 12 KQDIEKVKEILAQQ-HFNVEPYQEKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQE 70
Query: 63 NHVLLACA---IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAF 118
+ IE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L + +
Sbjct: 71 TIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFY 130
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ S+E + S + GEL Q +L + T +Y IK KTA LFS +
Sbjct: 131 LLTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLSAV 190
Query: 179 VSSLIAGVQNSV------RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + ++G NLG+AFQ++DD+ + + GK ED + G
Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDL-KDLNPLVKNGKPKFEDLKAG 249
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TLP+IL + ++ ++ G+ + ++ + L + +
Sbjct: 250 IYTLPIILT------LKDKSFQKILSKGESNPFIIEN--YFIENPDYLKRCKDIIDHFLN 301
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L DS L ++ RLN
Sbjct: 302 EAQKALEFLIDSPESDQLNSLLTNL--RLN 329
>gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 392
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 114/304 (37%), Gaps = 23/304 (7%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L
Sbjct: 87 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 146
Query: 100 VWGNQTS----------------VLVGDFLLSQAFCMVIE-----TKSQEALEALSLVAC 138
+G +L+GD L A M+ + + Q A +
Sbjct: 147 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAMRV 206
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSY 197
LA G+ L+ + L V + K+ LE+ + +AG + L Y
Sbjct: 207 ELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRY 266
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G AFQL DDVL G GK D K T V+ A Q +
Sbjct: 267 GAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQLADPPVRRELIELA 326
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
+ +++ ++ E A+ E A++ L LP D S + +L E+
Sbjct: 327 TRDVLDAAAIERWKALIVETGAVRLIERMISDRVASAREQLCGLPVDESVRAALAEMAAV 386
Query: 317 CLQR 320
C R
Sbjct: 387 CTDR 390
>gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 365
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 129/325 (39%), Gaps = 23/325 (7%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + V Y GGK +RP L L +A V
Sbjct: 39 LRAAVNRLAPPMDTVAAYHFGWIDAEGNPAEGDGGKAVRPALALLSAEAAGAAPGAGVPG 98
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIET 124
A A+E +H +LLHDD++D RR + V G ++LVGD L + A + +
Sbjct: 99 AVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEILLELGTA 158
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ A L+ L +G+ + +S VT E+ L + +KT L + A + +++
Sbjct: 159 DAGRATRRLTAATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACAASIGAVLG 218
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L+ YG +LG+AFQ VDD+L G+ GK D R K +LPV+ A
Sbjct: 219 GADDRTADTLERYGYHLGLAFQAVDDLLGIWGDPATTGKRTWSDLRQRKKSLPVVAALAA 278
Query: 245 GTKREKNFWKSTIND--------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
G + + D S E ++ ++ T A A
Sbjct: 279 GGSDSERLAQILAADAHKPEEEFADFSEEEFAVRAALIEQSGGRDWTSQEARRQHATAMA 338
Query: 297 SLRCLP-DSSWKKSLMEVVDFCLQR 320
+L + + + + + DF + R
Sbjct: 339 ALDSVDMPAEIRARFVALADFVVVR 363
>gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
Length = 369
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 114/304 (37%), Gaps = 23/304 (7%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L
Sbjct: 64 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 123
Query: 100 VWGNQTS----------------VLVGDFLLSQAFCMVIE-----TKSQEALEALSLVAC 138
+G +L+GD L A M+ + + Q A +
Sbjct: 124 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAMRV 183
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSY 197
LA G+ L+ + L V + K+ LE+ + +AG + L Y
Sbjct: 184 ELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRY 243
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G AFQL DDVL G GK D K T V+ A Q +
Sbjct: 244 GAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQLADPPVRRELIELA 303
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDF 316
+ +++ ++ E A+ E A++ L LP D S + +L E+
Sbjct: 304 TRDVLDAAAIERWKALIVETGAVRLIERMISDRVASAREQLCGLPVDESVRAALAEMAAV 363
Query: 317 CLQR 320
C R
Sbjct: 364 CTDR 367
>gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
Length = 347
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 118/300 (39%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I +I GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIINRGGKRIRPMIMILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGTSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA---FQRGTKREKNFWKSTIN 258
+ + GK G+D GK +LP+I + K F + +
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLFEGKKSLPIIYFLQEKKFEPKIISKFNQIKYS 283
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + + K ++ ++++ ++ A Y + K+ L P + +K L+ +V+
Sbjct: 284 KTTTARKEIFKLIEMINSSKSIRNSTIIALKYLNEFKNELNLYPLANKYKNLLINIVEQI 343
>gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J1-175]
Length = 157
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFC 119
AF
Sbjct: 121 AFS 123
>gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J2-064]
Length = 233
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y + +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTL 120
Query: 117 AFC 119
AF
Sbjct: 121 AFS 123
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMKAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILDET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|313616871|gb|EFR89544.1| polyprenyl synthetase [Listeria innocua FSL S4-378]
Length = 127
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ G LG+AFQ++DDVLDY +GK + D + G +LP+I A + F
Sbjct: 2 CYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK---GHLAEFE 58
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
++ + ++ ++ + + + A Y KA ++ LP +++ + +
Sbjct: 59 PLLSQKLDMTDDASEQVLALISKYKGVEQAFKLASKYTNKALREIKKLPAGAYRDDMYRL 118
Query: 314 VDFCLQR 320
L R
Sbjct: 119 TKSILDR 125
>gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
Length = 294
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 117/321 (36%), Gaps = 48/321 (14%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ + R+ + + ++Y I +GGK LR L L +A + + +
Sbjct: 16 LKDAQARITAHMEARLAGGDD-LHAAMRYAI-TGGKMLRGFLVLESARLHGVPAEAAIEA 73
Query: 68 ACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE IH +L+H +DD LRRG+ W +VL GD L S AF ++ +
Sbjct: 74 ALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQSFAFELLADPS 133
Query: 126 SQEALEALSLVACTLAEGELR---QLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSS 181
L + + Q+ TE L I + ++
Sbjct: 134 VGPHALTLIRGLAQSSGKDGMVSGQMLDIAAETATEPLTLKEITRLQGRKTGCLIEWSAT 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
A + + L+ Y LG+AFQ+ DD+LD G+ ++GK + +D GK T +L
Sbjct: 194 AGAVLAGADPAPLRQYASALGLAFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLL- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + + RA + +A +L
Sbjct: 253 -------------------------------------GLAEAKARAQTLCDEACAALSLY 275
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
++L E F + R +
Sbjct: 276 --GETAETLKEAARFVIARDS 294
>gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
Length = 264
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 13 EKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
EKV + + + ++ + + Y GGKR+RP+L L ++ V++ CAI
Sbjct: 9 EKVEVKLRQILAPSEPLLLYEAMSYYPLQGGKRIRPLLLCGVCDALGGNVEDAVVVGCAI 68
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH +L+HDD+ D+ RRG + + +G ++L GD LL+ AF ++ +
Sbjct: 69 ELIHNYSLIHDDLPALDNDPQRRGLPSCHIAFGEDIALLAGDALLTLAFQVLSDVSQFNQ 128
Query: 130 LEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+E ++ + + +D+ I K AA VS+ I
Sbjct: 129 VEPSDLLLIIHEISRRAGSEGMVGGQVMDIRGIGDRREINLKKTAQLFAACFVSAGIIAK 188
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLD 213
+ S+ + L+ G+ G+ FQ+ DD D
Sbjct: 189 KKSMLKDLEKVGIRTGLLFQMCDDWKD 215
>gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
ATCC BAA-1163]
gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
ATCC BAA-1163]
Length = 335
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 28/330 (8%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGD 62
+D+EKV ++ ++ +VE + + LI + GK +R ++T+ Y +
Sbjct: 12 KQDIEKVKEILAQQ-HFNVEPYREKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQE 70
Query: 63 NHVLLACA---IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAF 118
+ IE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L + +
Sbjct: 71 TIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFY 130
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ S+E + S + GEL Q +L + T +Y IK KTA LFS +
Sbjct: 131 LLTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLSAV 190
Query: 179 VSSLIAGVQNSV------RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + ++G NLG+AFQ++DD+ + + GK ED + G
Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDL-KDLNPLVKNGKPKFEDLKAG 249
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
TLP+IL + ++ ++ G+ + ++ + L + +
Sbjct: 250 IYTLPIILT------LKDKSFQKILSKGESNPFIIEN--YFIENPDYLKRCKDIIDHFLN 301
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L DS L ++ RLN
Sbjct: 302 EAQKALEFLIDSPESDQLNSLLTNL--RLN 329
>gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo]
gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis]
Length = 457
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 85/356 (23%), Positives = 143/356 (40%), Gaps = 46/356 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
LE L K I ++ +D I DVVKY++ K RP L L A +L R
Sbjct: 109 TLERLVNK----FQERIQSQVLTDNTEINDVVKYVLTGQSKLFRPKLGLMVARLLSMRNT 164
Query: 62 ---------------------------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
D + L + E +H +L+HDDV+D + LRR
Sbjct: 165 HGENTTSADEGSTLGYMNYGNLSTELMDKVLRLLQSYEIVHIGSLMHDDVLDSANLRRRM 224
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
A + G + +VLVGD +L++A V SQ +S L +GE+ + + N+
Sbjct: 225 PAVHVKAGVKIAVLVGDLMLTRACSTVANLGSQVLTVRMSKALENLIKGEITTVEGTDNV 284
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ +YL KTA L + + + G+++G+AFQ+ DD+LDY
Sbjct: 285 ESMMCNYLKKTFLKTASLIAECCASIASLLRQDEITCHKCYLLGLHVGMAFQIYDDLLDY 344
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+++GK D +G T+P+++A + +G + N+ +
Sbjct: 345 ECGSSDLGKPTLNDLSSGLITMPLLMALPESPGL-----GVLVTNGTVQSGNVDSVLPYV 399
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCL------PDSSWKKSLMEVVDFC---LQRL 321
++A + Y + + L+ + PDS ++ F L RL
Sbjct: 400 TCSQAYERSRYAVMMHLAEVSRILKGMEGNKTSPDSPLSDLSQSLLRFVYDTLTRL 455
>gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
HTCC2503]
gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
HTCC2503]
Length = 316
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
V + I + + ++ + + GKR+R +LTL A + + ACA+E I
Sbjct: 31 VESRLADLIPAVGPP-AEAARHSLLAPGKRIRAVLTLLAARECGGSLERALDTACAVEMI 89
Query: 75 HTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
HTA+L+ DD+ LRRG+ +G T++L LL+ A+
Sbjct: 90 HTASLVIDDLPAMDDADLRRGRPTCHRAFGESTAILAAIGLLNGAY 135
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEFAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILDET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
Length = 296
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILDET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus
Py2]
Length = 359
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D+ + +I +R+ S ++ +++++ S GKRLRP+LTLA A+ L
Sbjct: 65 SRDLSFLRAVIDRRLGLLVPPAASHPAVLHAAMRHILLSPGKRLRPLLTLAAAIQLNASE 124
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ CA+E IH ++L+ DD+ +RR + + +G +VL LLS+AF
Sbjct: 125 HAVLDFGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAF 183
>gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 368
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/308 (21%), Positives = 111/308 (36%), Gaps = 25/308 (8%)
Query: 38 IFSGGKRLRPMLTLATALMLEYRGDN--HVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+GGKR+RP D+ + A A+E +H+ L+HDD++D S RRG
Sbjct: 59 FLAGGKRIRPAFCYWGWRGAGGGADDEGVIGAAAALELLHSFALVHDDIIDASDTRRGAP 118
Query: 96 AARLVWGNQTSVLVGD---------------------FLLSQAFCMVIETKSQEALEALS 134
+ G F A + + +EA ++
Sbjct: 119 SLHRQHAELHRRSGGRGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIREARPLVA 178
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193
L G+ ++ + VI KTA L + ++AG ++ +
Sbjct: 179 HSLTELVLGQYLDVAEQACSRHSVSRSYTVIHYKTAKYTIERPLHLGGVLAGASPALLGS 238
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+Y M LG AFQL DDVL G+ GK + +D R K T+ + A +R + ++
Sbjct: 239 YTAYAMPLGEAFQLRDDVLGAFGDPAVTGKPVADDLRTRKATVLLATARERASAAQEAEI 298
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLME 312
+ + ++ E AL + E A +L +P + L
Sbjct: 299 DRLFTGADLDDAQTTRLQDLVVETGALAECERLIDRRVDAAAAALGAMPVGDDVRAVLAS 358
Query: 313 VVDFCLQR 320
++ R
Sbjct: 359 LIRATTDR 366
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALR 91
++Y + +GGKR+RP L +A ++ D + ACA+E IHT +L+HDD +D+ R
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
RGK V+G T+VL GD LLS AF
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEH 89
>gi|7108625|gb|AAF36504.1|AF130462_1 heptaprenyl diphosphate synthetase [Corynebacterium glutamicum]
Length = 114
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
VDD++D E +E GK G D R G TLPV+ A + T + E +
Sbjct: 1 VDDIIDIFSETHESGKTPGTDLREGVFTLPVLYALREDTPVGAELRDILTGPLE-DDETV 59
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++ ++ Y Y A L LPDS+ K++L + F ++R+
Sbjct: 60 NHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKRV 113
>gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893]
gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893]
Length = 299
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 68/332 (20%), Positives = 125/332 (37%), Gaps = 53/332 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + +++ + +++ E + ++Y + GGKR+RP L LA A L
Sbjct: 8 LAAFLEQCRNQIDAELERQLCASGQGSERLQQAMRYSVLGGGKRIRPALCLAAATALGQP 67
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ ++ AC++E IH +L+HDD+ +D+ LRRG+ + + T++L GD L + AF
Sbjct: 68 RESAIVPACSLELIHAYSLIHDDLPAMDNDDLRRGRATTHIAFDEATAILAGDALQTLAF 127
Query: 119 CMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ E + L+++ +A G+ L E+ A
Sbjct: 128 GWLAEAPGVDDQVRLAMIRELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGA 187
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
++ ++ + V AL Y LG+AFQ+ DD+LD G+ +GK G D
Sbjct: 188 LIAASVRMGALTATDVNEDQLAALTVYSQTLGLAFQVQDDLLDIEGDTTVIGKPQGSDLA 247
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
KPT P ++
Sbjct: 248 RSKPTYPSLM--------------------------------------GADGARNYLSQL 269
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A S+ L ++ + + R +
Sbjct: 270 LESALASIEMF--GVEGDLLRDMAGYVVARTH 299
>gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
Length = 335
Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 79/330 (23%), Positives = 145/330 (43%), Gaps = 28/330 (8%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGD 62
+D+EKV ++ ++ +VE + + LI + GK +R ++T+ Y +
Sbjct: 12 KQDIEKVKEILAQQ-HFNVEPYREKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQE 70
Query: 63 NHVLLACA---IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS-QAF 118
+ IE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L + +
Sbjct: 71 TIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFY 130
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ S+E + S + GEL Q +L + T +Y IK KTA LFS +
Sbjct: 131 LLTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLSAV 190
Query: 179 VSSLIAGVQNSV------RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + ++G NLG+AFQ++DD+ + + GK ED + G
Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDL-KDLNPLVKNGKPKFEDLKAG 249
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
T P+IL + ++ ++ G+ + ++ + L + +
Sbjct: 250 IYTFPIIL------ALKDKSFQKILSKGESNPFIIEN--YFIENPDYLKRCKDIIDHFLN 301
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L DS L ++ RLN
Sbjct: 302 EAQKALEFLIDSPESDQLNSLLTNL--RLN 329
>gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 360
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDWRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK IG D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIREGKRTVLLADALSAADTADKADLIA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEADCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFI 355
>gi|325095662|gb|EGC48972.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H88]
Length = 375
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 95/278 (34%), Gaps = 5/278 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK LR A L ++ + + +HTA+LL DDV
Sbjct: 63 KEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE 122
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + K+ + L G+
Sbjct: 123 DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLNLHRGQG 182
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 183 MDVFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESDTGIDCVTLVNLMGLIF 239
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 240 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLIN--ILKQKTTDEE 297
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ A M + T KA + L +
Sbjct: 298 VKRYAVNYMESTGSFAYTRKTVMQLRDKALTLIDELEN 335
>gi|225557933|gb|EEH06218.1| geranylgeranyl pyrophosphate synthase [Ajellomyces capsulatus
G186AR]
Length = 403
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 95/278 (34%), Gaps = 5/278 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK LR A L ++ + + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + K+ + L G+
Sbjct: 151 DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESDTGIDCVTLVNLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLIN--ILKQKTTDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ A M + T KA + L +
Sbjct: 326 VKRYAVNYMESTGSFAYTRKTVMQLRDKALTLIDELEN 363
>gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
Length = 287
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 66/301 (21%), Positives = 109/301 (36%), Gaps = 47/301 (15%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85
+++ + Y + GGK LR L L +A + + + A AIE IH +L+H +
Sbjct: 28 DLLHQAMLYAL-RGGKMLRGFLVLESARLHDVPETAALEAALAIECIHAYSLVHDDLPCM 86
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DD LRRG+ W T+VL GD L + AF ++ + +L A +
Sbjct: 87 DDDDLRRGQPTLHRKWDEATAVLAGDSLQTLAFELLAREEVGPHAISLIRTMAEAAGKDG 146
Query: 146 R---QLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
Q+ L I + + + A + + L+ Y L
Sbjct: 147 MVSGQMLDIAAETAEAPLTLEQITTLQARKTGCLIEWSACAGARLAGADPAPLRHYAQAL 206
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD G+ +GK + +D GK T +L
Sbjct: 207 GLAFQIADDILDIEGDAATVGKAVRKDEDAGKATFVSLL--------------------- 245
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L + RA +A +L P + +L + F + R
Sbjct: 246 -----------------GLEGAKRRAQELADQACAALA--PYGAAGDTLKDAARFVISRD 286
Query: 322 N 322
+
Sbjct: 287 S 287
>gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec]
gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
Length = 338
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 17/319 (5%)
Query: 18 LILKRICSDVEMIPDVVKYL---IFS--------GGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + VV Y + + GGK +RP L L +A + +
Sbjct: 19 ALRATVDRLHPRLRHVVAYHRGWVDAAGEPVPGNGGKLVRPALALLSAEAAGAPAEVGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A V+G ++L GD LL A +++E +
Sbjct: 79 AAVAVELVHDFSLLHDDLMDGDRERRHRATAWTVFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
+ A ++ + + Q ++ + + + +S ++
Sbjct: 139 EPGRRAAVILGAGVQDLVRGQAEDLLFESRSDVSVAETLHMEDGKTGALLACSASLGAVL 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + V L YG LG AFQL+DD+L G+ GK + D R+ K ++PV++A +
Sbjct: 199 AGAPDEVVDGLAEYGSRLGTAFQLIDDLLGIWGDPAVTGKPVLNDLRSRKKSVPVVVALE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CL 301
G +G+ S ++L + ++ T A + +++LR +
Sbjct: 259 AGGDDADELRAFLTEEGEASEDDLHRIAALVERAGGRDWTTAEADRQLKACENALRSISI 318
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S+ + L+ + F +R
Sbjct: 319 PASAEAE-LLAMARFVTER 336
>gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 54/322 (16%)
Query: 15 VNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+N ++ K + + +KY + +GGKRLR L ML +N +A +I
Sbjct: 15 INLILKKYLNIFSKKNMNLTLAMKYALLNGGKRLRAFLVYCIGKMLNVSSNNLDCIAASI 74
Query: 72 EFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH +L+HDD+ RRG+ + + + ++L GD L S AF ++ +
Sbjct: 75 ECIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILAGDSLQSLAFNILSTVNMPDV 134
Query: 130 LEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + G+ L +L ++ + ++++A
Sbjct: 135 SVNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQLEEIYKYKTSFLIYAATRMT 194
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ L Y ++G+AFQ+ DD+L+ G GK G D + K T +
Sbjct: 195 ILSSNIKNKKILINLIKYSKSIGLAFQIQDDILNVIGSKKITGKCQGSDKKLNKNTYSSL 254
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + ++ +A++ +K+ L
Sbjct: 255 I--------------------------------------GIKLSKEKAFNLYKKSLSYLE 276
Query: 300 CLPD-SSWKKSLMEVVDFCLQR 320
+ + +SL+++ + + R
Sbjct: 277 YINELGYNTESLIKLAHYIIIR 298
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+H +DD
Sbjct: 33 LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +++ +E +
Sbjct: 93 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGP 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++ +T ++ ++ K KT L A+ S+++ + L +
Sbjct: 153 EGMVGGQVADMEAEGKKLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFA 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 213 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT----------------- 255
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 256 --------VDRAKDILDET-------------IAKAKDAIGSLQLQD--EYLLSICDLIA 292
Query: 319 QRLN 322
+R N
Sbjct: 293 KRNN 296
>gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
Length = 360
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK IG D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIRKGKRTVLLADALSAADTADKADLVA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEADCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFI 355
>gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
Length = 345
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 76/326 (23%), Positives = 126/326 (38%), Gaps = 23/326 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
E V + + + + ++ Y SGGK +R L + A ++
Sbjct: 23 ELVRPALREAVGRTHPWVGEMAAYSFGWCEVGGAPTAASGGKGVRQALAVLGAEVVGAPA 82
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A A+E +H +LLHDD++D RR + +G +VL GD L + A +
Sbjct: 83 RAGVPAAVAVELVHVFSLLHDDIMDGDVERRRRPTVWKAYGTGPAVLAGDALFALAVETL 142
Query: 122 IETKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + A + V +Y + + KT L
Sbjct: 143 ATAEPGASALRTLSAALGELVRGQADDLLFAARPWAGPERVRPAEYRAMAERKTGALLGC 202
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +L+ G + AL G LG+AFQ+VDDVL G+ GK + D R K T
Sbjct: 203 AAALGALLGGGPPAAVAALDRAGRRLGLAFQIVDDVLGIWGDPEITGKPVHGDLRERKKT 262
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PV+ A G+ + + S + ++A +++ A + A+
Sbjct: 263 FPVLAALDAGSPEARRLAELL-----ASDADPREAAVLVEAAGGRAAALDEARRHITAAQ 317
Query: 296 DSLRCL-PDSSWKKSLMEVVDFCLQR 320
D+L L P S+ L + F L+R
Sbjct: 318 DALADLAPRSAAVDELRALSAFLLRR 343
>gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20]
Length = 386
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/357 (18%), Positives = 124/357 (34%), Gaps = 56/357 (15%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPML-----TLATA---LMLEYRGDNHVLLACAIE 72
+ + + + + SGGKR+R +L + +A G + V L A+E
Sbjct: 31 EDLGQAAPELLEAAG-SVLSGGKRMRAVLGAVGCAILSAPKQRAERLTGSDAVHLGTALE 89
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL------------------------ 108
+ L+HDD++D + RRG AA V+
Sbjct: 90 LYQASALVHDDLMDSADTRRGLPAAHRVFARNHEARGWLGRPQTFGANGAILLGDLLLSL 149
Query: 109 ----VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ S+A + + A A + +A G+ + +++
Sbjct: 150 AGEEMSALAPSRASSQTRSSAVRYARSAFDAMTTEVALGQFLDVRSENLPLPWDQEAGAA 209
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQ--------------ALKSYGMNLGIAFQLVDD 210
+ S S+ + + L ++G ++GIAFQL DD
Sbjct: 210 ARRMQDEALSVVRHKSARYSVRHPLLIGALLAGLDPSGTTAEHLAAFGEDVGIAFQLRDD 269
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
L G GK G+D R GK T+ + L + R K + S + + + + E + +
Sbjct: 270 DLGVFGSPQATGKPAGDDLREGKRTVLLALTWGRCDKAGRRMLGSVLANPEATEEQIGEV 329
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-----SSWKKSLMEVVDFCLQRLN 322
++ A E ++ + +L L D ++ + L + D R++
Sbjct: 330 AALIENCGARATHEEIIAAHREAGNRALERLGDEGVVSTASLEDLAVLADLLTHRVS 386
>gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 54/319 (16%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
+ + + + ++Y GGKRLRP L T + ++ A A+E IH
Sbjct: 21 HFIASLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELFGMSLESLDAPAAAVECIHAY 80
Query: 78 TLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+H +DD LRRG+ + +G ++L GD L + AF ++ + + + L
Sbjct: 81 SLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRL 140
Query: 136 VA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ G+ L + A++ +A +
Sbjct: 141 AMISELAHASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALAAGE 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L
Sbjct: 201 TGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLL----- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---- 301
L + +A Q++ SL L
Sbjct: 256 ---------------------------------GLDNARKKAQELYQESLASLDDLVASS 282
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L + +F ++R
Sbjct: 283 PIPLNIAPLQALANFIVER 301
>gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
Length = 294
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 69/302 (22%), Positives = 117/302 (38%), Gaps = 49/302 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + ++Y SGGKR+RP+L A + ACA+E IH +L+H +DD
Sbjct: 33 LHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
LRRG+ + T++LVGD L +QAF ++ + L LVA
Sbjct: 93 DDLRRGRPTVHKAYDEATALLVGDALQTQAFIVLAGAGAIAPAARLQLVAELALASGSTG 152
Query: 148 LSLSKNLDVTEEDYLH-------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
++ + +D+ + + KT L A++ + +L + AL Y
Sbjct: 153 MAGGQAIDLQNVGRAMTREALEAMHRMKTGALLRASVRMGALCGEIDAEGLAALDRYAAA 212
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ+VDD+LD + +GK G+D + KPT ++
Sbjct: 213 VGLAFQVVDDILDVTADTATLGKTAGKDAAHDKPTYVSLM-------------------- 252
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L A + A ++L L ++ D + R
Sbjct: 253 ------------------GLDPARALAGTLRADAHEALAGF--GERADRLRDLADLIVLR 292
Query: 321 LN 322
+
Sbjct: 293 TH 294
>gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1]
gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1]
Length = 282
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 16/245 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ L ++N + + + + + + Y + + GKRLRP+L L+ +
Sbjct: 1 MEQLRT-------EINSRLEELLEPLKNGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQI 53
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLL--- 114
++ +ACAIE IHT +L+HDD+ LRRG+ + T++L GD LL
Sbjct: 54 DYHIYMDIACAIEMIHTYSLIHDDLPGMDNDDLRRGRPTCHKQFDEATAILAGDALLNLG 113
Query: 115 --SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
+ + + L L + +Q ++ + + L I
Sbjct: 114 VNTILNISIDSDLKVKLLNRLYEASGINGMIYGQQQDITFEKQLANLEQLKDIHKHKTGE 173
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A + S Q S G +LG+AFQ+ DD+LD G ++GK +G D N
Sbjct: 174 LIAVSMQLGSL-IANPSDYQYWTSIGFDLGLAFQIQDDILDVVGNTEQLGKKVGSDQENH 232
Query: 233 KPTLP 237
K T
Sbjct: 233 KTTYV 237
>gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 355
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/318 (20%), Positives = 119/318 (37%), Gaps = 30/318 (9%)
Query: 14 KVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLE-YRGD 62
+V+ ++ + I + E + + ++ + + GKRLR + D
Sbjct: 18 RVDEVLHRFIGLEAEQLSAIDPALGPVAGQLEAAV-ADGKRLRAAFCYWGWRAVGQPDSD 76
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR------------------LVWGNQ 104
V A ++E +H A ++HDD++DDS LR G+ A +
Sbjct: 77 ALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHIALRAAVRRRPRAVAAARSLAMLV 136
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+L+ A + A SL+A L GE ++ + T +
Sbjct: 137 GDLLMSLAGQMFATSGLPAAYLARARPLWSLLARELIAGECLEILRTGADPDTTASLKVI 196
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
L + +AG +R+ +YG+ LG AFQL DD+L G+ GK
Sbjct: 197 RYKTAKYTVEQPLLIGGALAGAGQRLREGYSAYGLPLGEAFQLRDDLLGLFGDPERTGKA 256
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+D R +PT + ++ E+ + + + + L +M +A E
Sbjct: 257 NADDVRGHRPTALLAETWRIAGDGEREQLSALLGRRDLDADGLDAVREVMCRLKAPDRIE 316
Query: 285 YRAYSYGQKAKDSLRCLP 302
+ ++A D+L L
Sbjct: 317 AMITARVEEALDALHELD 334
>gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
17241]
gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
17241]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 112/302 (37%), Gaps = 50/302 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDD 87
+ D ++Y + GKRLR L L A + + LACAIE +H +L+HDD +D+
Sbjct: 33 VVDAMRYSLLDAGKRLRAALVLEFARLASAPREGATALACAIEMLHAYSLIHDDLPCMDN 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEALEALSLVACTL 140
RRGK + +G T++L GD LL+ AF + +
Sbjct: 93 DDFRRGKPSCHKEFGESTALLAGDALLTLAFETAAGAPLLTDLQRVEAVCTLSKAGGVCG 152
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
G + V E + KT L AA + L + A Y
Sbjct: 153 MIGGQVIDLACEGNTVDEATLDTLCTLKTGALLRAAARLGCLAGKADKKMYDAADRYAAA 212
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ+ DD+LD G+ + +GK +G D N K T +
Sbjct: 213 VGLAFQITDDILDVTGDAHTLGKPVGSDAENHKTTYASLF-------------------- 252
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + RA + + AK D+S+ L+ + D L R
Sbjct: 253 ------------------GVAGAKARAIALIEAAKRETDAFSDNSF---LVWLADMVLNR 291
Query: 321 LN 322
+
Sbjct: 292 DH 293
>gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH]
gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH]
Length = 348
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 14/305 (4%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLH 81
S ++ I +I GGKR+RPML + A L Y N L+ +E H+ +L+
Sbjct: 41 STIKTIKAPAIEIINRGGKRIRPMLMILLAYALGYNNSNTKNLYKLSMLLELPHSGSLII 100
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
DD+ D + RRGK A L++G S+ + + ++ + + + L
Sbjct: 101 DDIEDGAIKRRGKPAIHLIYGLDNSINTANLIYFLPAKLIQTANLKTSQQLLIYENFFTT 160
Query: 142 EGELR-----QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
L ++ + + + + I + + L +
Sbjct: 161 LSNLHLGQGIDIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFLAGILTNNENKAKNLYN 220
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
M LG FQ++DD+ + + GK G+D GK +LP+I + + + +
Sbjct: 221 TFMKLGTCFQIIDDIKNIK--DGINGKEFGDDLIEGKKSLPIIYFLKEKQFDRQIIQELS 278
Query: 257 INDGKISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLME 312
K E+ ++ ++ + A+ A SY K + + +K +M+
Sbjct: 279 KIKNKPIDESREEILKFSNMINSSSAIQAASTLAISYLNKFIEEFNSYALINKYKDMIMD 338
Query: 313 VVDFC 317
+V+
Sbjct: 339 IVEKI 343
>gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium
diphtheriae NCTC 13129]
gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
diphtheriae]
Length = 374
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/334 (18%), Positives = 109/334 (32%), Gaps = 42/334 (12%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY------RGDNHVLLACAIEFIHT 76
+ + VE++ + + GGKR+RP A + + ++E I
Sbjct: 47 VSNAVELLVE----YVLGGGKRIRPTYAWAGFVASGGLTNKTEDPGAVLTAIGSLELIQA 102
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+HDD++D S RRG V + L + A+
Sbjct: 103 CALIHDDIIDASDTRRGNPTVHRVAERTHA---ESHRLGDSARFGESIAILVGDLAMVWA 159
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVI-------------------------KSKTAV 171
L ++ + + VI A
Sbjct: 160 DDMFHNSGLSDAAIRRASNAWRGMRTEVIGGQLLDIYIESTGSESIELAETVNRFKTAAY 219
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + + +AG + L++YG ++G+AFQL DD+L G+ + GK G+D R
Sbjct: 220 TIERPLHIGAALAGADDQTVHCLRNYGRDIGLAFQLRDDLLGVFGDPSVTGKPAGDDLRE 279
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTEYRAY 288
GK T+ V A + I E++ + I+R + A E R
Sbjct: 280 GKRTVLVAKALEILESAGSIHEAEMIRRDLGAVSGAEDIAQLASIIRSSGAADAVEERIA 339
Query: 289 SYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRL 321
+ + + D+ + L + R
Sbjct: 340 TLRTSGLAHISNDVIDAEAQDFLKHLAIKATSRS 373
>gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
Length = 207
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 13 EKVNFLILKR-ICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+V+ + + E+ + + ++Y + +GGKR+RP+L A L AC
Sbjct: 11 ARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAAC 70
Query: 70 AIEFIHTATLLH 81
A+E IH +L+H
Sbjct: 71 AVELIHAYSLVH 82
>gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + E+ +I + + + + + + + Y + +GGKRLRP+L T +
Sbjct: 8 NFKEELKRRTEEAEHVIREYLPEESGFAKTMAEAMNYSMTAGGKRLRPILIRETYELFGG 67
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A+E IHT +L+HDD+ D+ RRG++ V+G VL G LL++A
Sbjct: 68 KDKLCEPFMAAMEMIHTHSLIHDDLPALDNDDYRRGRLTTHKVYGEAMGVLSGVALLNRA 127
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT--------EEDYLHVIK-SK 168
+ +++ + + A + + + V E L I +K
Sbjct: 128 YEVMLSAFDLTGDKDRVIAAMRIIADKTGINGMLGGQSVDVENDGKPLEHKMLDYIYKNK 187
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T+ L A++ +++AG + ++ N+G+AFQ+ DD+LD E+GK I D
Sbjct: 188 TSALIEASMMTGAVLAGASEKELKVVEQAAENIGLAFQIQDDILDVTSTQEELGKPIHSD 247
Query: 229 FRNGKPTLP 237
+N K T
Sbjct: 248 EKNNKVTYV 256
>gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata]
Length = 471
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/315 (20%), Positives = 123/315 (39%), Gaps = 31/315 (9%)
Query: 17 FLILKRICSDVEMIPD-VVKYLIFSGGKRLRP--------MLTLATALMLEYRGDNHVLL 67
I++ I + ++ D V+ Y G RP + + L R +
Sbjct: 177 AEIVEMIHT-ASLLHDDVIDYSDTRRG---RPSGNVAFSNKMAVLAGDFLLGRATVAISR 232
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E + + ++V+ ++ ++ V D L + I
Sbjct: 233 LKNPEVVELMSNSIANLVEGEFMQLK------------NMAVEDQPLVGSKNDKILPPPS 280
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ LE S + +++ E YLH KTA L S + +++++G +
Sbjct: 281 KKLELKEHDYRVATPEATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGAR 340
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ V + S+G N+GI FQLVDD+LD+ ++GK G D + G T PV+ A++
Sbjct: 341 DPVIEECYSFGRNIGICFQLVDDLLDFSVSAKDLGKPAGADLKLGIATAPVLFAWKEDPS 400
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
I +++K ++++ + T A Y KA +L LP+S
Sbjct: 401 LGP-----LIKRNFSEPGDVEKTVKSVQDHDGVGKTMEFAKEYRNKALQNLKNALPESDC 455
Query: 307 KKSLMEVVDFCLQRL 321
+ +L + + + R
Sbjct: 456 RSALEFLTNSIVTRK 470
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L +M + I+ I S + V Y + GK++RP
Sbjct: 44 SLVSNEMNTLAKNIMALIGSGHPTLNRVTSYYFETEGKKVRP 85
>gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
Length = 347
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I +I GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIINRGGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKDEPKIISKFNQIKNA 283
Query: 262 ISVENLKKAFII---MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ K+ + + ++++ ++ A Y + K L P + +K L+++ +
Sbjct: 284 KTSTARKEILKLTKMINSSKSIKNSTIIALKYLNEFKAELNLYPLTNRYKNLLIDIAEQI 343
>gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14]
Length = 293
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 106/288 (36%), Gaps = 8/288 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + +Y+ GK +R L A L L + + +H A+LL DD+ D+S
Sbjct: 9 ILEPYEYICELPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLIDDIEDNSD 68
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG+ A ++G ++ +++ + E ++ EA+ L +G+ +
Sbjct: 69 LRRGRPVAHHIYGIPATINCANYVYFLSLQRCQELQNAEAMSTYVTEMLRLHQGQGLDIY 128
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
D + ++ + + R L I FQ+ D
Sbjct: 129 WRDQCACPSIDEYLEMVKNKTGGL---FRLAVGMLQAFSDCRTDFTPLLDLLSIYFQIRD 185
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D ++ E K+ GED GK + P+I+ Q + + +E K
Sbjct: 186 DYVNLFDEAYMENKSFGEDLSEGKFSYPLIVGIQ--ANLNDTRLLNIMKQRTKDIEVKKY 243
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
A +R+ A T+ + + K L + + L +++D
Sbjct: 244 AIEYLRKQGAAAQTKAKLDELNESIKSQLDSIGGN---SILEKIMDSL 288
>gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105]
gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105]
Length = 300
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/329 (18%), Positives = 120/329 (36%), Gaps = 57/329 (17%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
E + +++ + ++Y + GGKRLR ML A +E
Sbjct: 19 FEAVLADKLKQFE--------GPSSELNAAMEYALLDGGKRLRAMLVFAAGYAVETPTSQ 70
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
AC+IE +H +L+HDD+ LRRGK + +G ++L GD L + AF +
Sbjct: 71 LNDAACSIEAMHAYSLVHDDLPSMDNDVLRRGKPTCHVKFGEAFALLAGDALQTAAFQWL 130
Query: 122 IETKSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
E+ + +A +A G+ L+ + + ++
Sbjct: 131 AESNQGSVQVRMQQIAALASAAGLQGMAAGQAIDLAHVGKPMDLQSLATMHARKTGDLIT 190
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ A + + L++Y LG+A+Q++DD+LD + +GK G+D N K
Sbjct: 191 ASVRMGYVSNATLSAVEKNGLEAYAHCLGLAYQVIDDILDVESTSDVLGKTSGKDALNNK 250
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT+ ++ L + + ++
Sbjct: 251 PTMVSLM--------------------------------------GLGEAKALLARLREQ 272
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + + + + L +V+ R +
Sbjct: 273 AFSACEVIAATR-RAPLETLVELITNRKS 300
>gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
Length = 362
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/312 (20%), Positives = 107/312 (34%), Gaps = 30/312 (9%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD-----NHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GGKR+RP L D + A+EF+ L+HDD++D S R
Sbjct: 51 FVLRGGKRIRPAFAWTGWLAGGGATDGDVARAALRACSALEFVQACALIHDDIIDASQTR 110
Query: 92 RGKVAARLVWGNQTSVLV----------------GDFLLSQAFCMVIETKSQEALEALSL 135
RG + + GD L+ A M + +
Sbjct: 111 RGYPTTHREFAELHAQRGWSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERYLRAA 170
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG------VQNS 189
A E+ L + D + +A V + +
Sbjct: 171 RAWAAMRTEVLGGQLLDIVSEASRDESQAAAERVVRFKTAGYTVERPLHVGAALAGASDQ 230
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
AL++ G++LG+AFQL DD+L G+ GK G+D R+GK T + A G
Sbjct: 231 AITALRAIGVDLGVAFQLRDDLLGAFGDPAVTGKPSGDDLRSGKHTPMLAHALATGGDAA 290
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKK 308
+ D + + +++A +R A + R +A ++ P D +
Sbjct: 291 EELRALVGTD--LDDDGVERARAALRATGAPSAMQSRVEELTSRATTAIDDAPIDDQARP 348
Query: 309 SLMEVVDFCLQR 320
L + + R
Sbjct: 349 VLAGLAAVLVDR 360
>gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760]
gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar
SAW760]
Length = 349
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/350 (18%), Positives = 120/350 (34%), Gaps = 32/350 (9%)
Query: 1 MKMLEDLTLKDMEKV--NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L L +++V DV++ + GKRLRP+ L +
Sbjct: 1 MEQLVSLVEDKLKEVFEEERKRNVCHPFQGECVDVMEKFVMGPGKRLRPLSLLLFFIGGG 60
Query: 59 YRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + ACA+E +H +TL HDD++D+ LRR + ++ + + +
Sbjct: 61 GKIEERKGVIRTACAMELLHDSTLAHDDIMDEDELRRNAPTVVKTFYDKYVERNKEDVKT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------------ 163
+ F + + + A+ + + + L N+ +
Sbjct: 121 EKFLFISRGTTYASSIAIMVGNILYSMAQRLCLESGSNIAEMLLELFDVLNYGQILDMSC 180
Query: 164 ---------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ KTA+ F + +AG + K +G + GIAFQ+ DD+LD
Sbjct: 181 LSTVEDYKLNVIMKTAIFFKTTACIGLTLAGRSEHDIEIGKEWGEHFGIAFQMRDDLLDI 240
Query: 215 RGEVNEMGKNIGEDFRNGK----PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
++ K + K T + K + E K
Sbjct: 241 DPLNGKLRKMGSDIKEGKKTAVVWTALKEGVLSKEDKEFVEGILKLNEKAFDNQEAFTKF 300
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319
I+R + + QKA D+L+ L L ++ D L
Sbjct: 301 LNILRGKPS-EIVRQEIKEHHQKAIDALKQLQLKEEGFSYLQQITDLLLH 349
>gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
NAm1]
gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
NAm1]
Length = 375
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 95/278 (34%), Gaps = 5/278 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK LR A L ++ + + +HTA+LL DDV
Sbjct: 63 KEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE 122
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + KS + L G+
Sbjct: 123 DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLNLHRGQG 182
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L ED + ++ + ++ + +G+ F
Sbjct: 183 MDVFWRDTLTCPTEDDYLEMVGNKTGGL---FRLAIKLMQAESDTGIDCVTLVNLMGLIF 239
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 240 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLIN--ILKQKTTDEE 297
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ A M + T KA + L +
Sbjct: 298 VKRYAVNYMESTGSFAYTRKTVMQLRDKALTLIDELEN 335
>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
Length = 290
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E+V+ + D +++ D + Y + GGKR+RP+L L + + + + A
Sbjct: 8 EEVDQSLKAYFDKDREYNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKKILTPAI 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-- 125
AIE IHT +L+HDD +D+ LRRGK V+G +VL GD LL++A ++++
Sbjct: 68 AIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLE 127
Query: 126 ------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + G++ + +++ ++ ++ KT L A++
Sbjct: 128 EGISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMS 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++A + L+ +G LG+AFQ+ DD+LD G ++GKN+ +D + K I
Sbjct: 188 GAILAEASERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITI 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L + + + + ++ D L
Sbjct: 248 F--------------------------------------GLEECKKKCVNITEECIDILS 269
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+ + + L + L+R
Sbjct: 270 SIEGNI--EPLKVLTMKLLERK 289
>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
Length = 262
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
EK+ + + + + E + + +KY GKR+RP+ T+A A L D+ + + I
Sbjct: 9 EKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDAITVGSGI 68
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
E IH +L+HDD +D+ RRG + +G ++L GD LL+ F ++ + ++
Sbjct: 69 ELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRENY 126
>gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 355
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 10/291 (3%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V
Sbjct: 64 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 123
Query: 101 WGNQTSVLVGDFLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + + ++ A L+ L +G+ + +S VT
Sbjct: 124 HGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLRLIDGQAQDISYEHRERVT 183
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A+ + +++ G + AL++YG +LG+AFQ VDD+L G+
Sbjct: 184 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLLGIWGD 243
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK------ISVENLKKAF 271
GK D R K +LPV+ A + D K S E
Sbjct: 244 PEATGKQTWSDLRQRKKSLPVVAALAAQGPASARLGELLAADAKSPDLDGFSEEEFATRA 303
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++ E T A A +L + K L + DF + R
Sbjct: 304 ALIEEAGGREWTTQEARRQHAIAVAALDDVAMPGLVKAQLTALADFVVVRK 354
>gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
DSM 20213]
gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
DSM 20213]
Length = 363
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 71/357 (19%), Positives = 128/357 (35%), Gaps = 45/357 (12%)
Query: 6 DLTLKDMEKVNFLILKRI-----CSDVEMIPDVVKYLI----------FSGGKRLRPMLT 50
T D+ + I++ + D + + D +K ++ GGKRLR +LT
Sbjct: 2 WTTADDLAIIEPRIIQLVRELTAAPDTDEVSDALKPVMAQVVDQAAASSQGGKRLRALLT 61
Query: 51 LATALMLEYRG--------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
L L + D LACAIE TA L+HDD++D+S LRRGK +A
Sbjct: 62 LDAFDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHRALE 121
Query: 103 N--------QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------- 147
L+ +L+ A + ++ ++ L +
Sbjct: 122 QAVHSGAIGHGLGLMLGDILATACIEIARRAARRLDNTDAINEAFLTMQREVEIGQVLDL 181
Query: 148 -----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ V + K+ + + L Q + G LG
Sbjct: 182 AVELTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAGADPAEAWQQALAVGRPLG 241
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQL DD+LD G GK +G D R GK T+ + A +++
Sbjct: 242 LAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALAAAGTQDRQQLIDLFESDAR 301
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV-VDFC 317
+ + + + + A+ + R ++ +++ ++ L + + L+ F
Sbjct: 302 TDDQVAFVIALFQSTGAVERSRNRIHALWLESRAAIANLNLEPEAENHLIAACARFV 358
>gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
Length = 264
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ + + + ++ D + Y +F GKR+RP+ A + L + + + CAI
Sbjct: 7 SQIESRLRELLKPFEPRILYDAMSYYVFQEGKRIRPLFLCAVSNALGGNLQDAITVGCAI 66
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
EFIH +L+HDD+ D+ RRGK + +++G ++L GD LL+ AF + ++
Sbjct: 67 EFIHNYSLVHDDLPALDNDDFRRGKPSCHVLFGEDMAILAGDALLNLAFETLSNRENF 124
>gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 799
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/332 (18%), Positives = 115/332 (34%), Gaps = 53/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-L 55
+ +L + V+ ++ + ++ ++ D Y + GKRLRP+L
Sbjct: 506 EAFVELVQTARKHVDAILPITSTASSLITEDPLLVDTANYSLEGSGKRLRPILAWVMGVQ 565
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL- 114
+ L A+E++HTA+L+ DD+ + L + +++ +
Sbjct: 566 VYGLDPAALSPLFRALEYMHTASLIFDDLPSQDNSPSRRGKPTLHEVHNSAIAELTGIFL 625
Query: 115 ------SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
QA + +S AL +K +T E+ + K
Sbjct: 626 IQKAVEEQASLKGFDNESVLALLQYLSRKAGEICMGQAMDLNAKGKVLTVEELDRICFYK 685
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + F A L +++A + LK++ + GIAFQ+ DD+LD G+ +GK G+D
Sbjct: 686 TGIAFEACLVAPAILARANETEIAVLKNFAYHTGIAFQIKDDLLDGEGDPRLLGKPTGKD 745
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
NG T +L K +
Sbjct: 746 IENGSSTYVTVLGTAEANKAMWEHYC---------------------------------- 771
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A ++L LP L ++ + + R
Sbjct: 772 ----LAMEALMELPKPPV--FLKHLLHYIINR 797
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 75/312 (24%), Positives = 127/312 (40%), Gaps = 56/312 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E++ + ++Y + +GGKRLRP+L +A ++ V +ACA+E IHTA+L+HDD+
Sbjct: 92 PEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPC 151
Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA--- 141
LRRG+ + + +G T++L GD LL+ AF V + + A + +
Sbjct: 152 MDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGS 211
Query: 142 ----------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+ + + V+ ++ KTA L AA +++ G +
Sbjct: 212 VAGVGGIAAGQVADMASEGAPSGSVSLGALEYIHVHKTARLVEAAAVSGAVVGGGGDGEV 271
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ ++ Y LG+ Q+VDDVLD G ++GK G+D GK T P
Sbjct: 272 ERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPR------------- 318
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-L 310
+M A KA+ L L + + + L
Sbjct: 319 ---------------------LMGLKGARAY----MGELLAKAEAELDGLD--AARTAPL 351
Query: 311 MEVVDFCLQRLN 322
+ F R +
Sbjct: 352 RHLARFMAHRQH 363
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ + D ++Y IF+GGKRLRP++ +AT + + + + ACA+E IHT +L+HDD+
Sbjct: 28 KNKTVIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYACALEMIHTYSLIHDDLP 87
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136
RRGK+ V+G ++L GD LL+ AF ++I ++ + L
Sbjct: 88 AMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQSNANVHLQAIEEIAK 147
Query: 137 --ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
G S+N V + ++ +KTA L +A +V ++IA + +
Sbjct: 148 AAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFKVGAIIAEATETDIAHM 207
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
S G N+G+AFQ+ DD+LD G+ ++GK+IG D N K T P
Sbjct: 208 NSLGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVENNKSTYP 250
>gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771]
Length = 194
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
E + ++ L++ + + E + + Y + +GGKRLRP L + +
Sbjct: 6 DTFETRLKNNAREIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A +L + + A+E +H +L+H +DD +RRGK + + T++L GD
Sbjct: 66 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGD 125
Query: 112 FLLSQAFC 119
LL+ AF
Sbjct: 126 SLLTYAFD 133
>gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
Length = 379
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 71/348 (20%), Positives = 117/348 (33%), Gaps = 51/348 (14%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHV----LL 67
K++ IL S + YL GGKRLR L A + +N +
Sbjct: 35 KISRFILNNKTSKHT--ESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDI 92
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--------------------- 106
A AIE H A L+HDD++D S RRG A +
Sbjct: 93 AVAIELFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGD 152
Query: 107 ---VLVGDFLLS-----------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
V F S QA ++T + E + V L + +
Sbjct: 153 MLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQ 212
Query: 153 NLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
D I K + L + + G + LK + + +G+AFQ+ +D
Sbjct: 213 LSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLAFQMRND 272
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ GK D + K T+ + LA TK + + + E
Sbjct: 273 IDGAFANDKITGKP-SSDLSSAKHTMLIGLARIHSTKHGRIRLEEILGQADNEEE----I 327
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
I+ E+ AL + E + +A + ++ S K+ L+++ +
Sbjct: 328 RAIVTESGALREAENLIKKWTDQAMEIIKEARLHSMGKEKLIKIASWL 375
>gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 296
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/324 (17%), Positives = 107/324 (33%), Gaps = 57/324 (17%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++ ++ + ++I + ++Y + +GGKRLRPML T M
Sbjct: 12 EEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGSAAKTVRPFMA 71
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN-------------QTSVLVGDFLLSQ 116
AIE IHT +L+HDD+ + + +
Sbjct: 72 AIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFETACTAFEE 131
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + A + G++ +S S + + + KT L +A
Sbjct: 132 APEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSF-IYELKTGALLESA 190
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +++AG + ++ +GIAFQ+ DD+LD +GK + D +N K T
Sbjct: 191 MMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTSTEEVLGKPVFSDQKNEKTTY 250
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ L + ++A
Sbjct: 251 VTLF--------------------------------------GLEKAKKDVEQISEEAIA 272
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
LR L + L +++ + R
Sbjct: 273 LLRSLQRENA--YLEQLLQELIHR 294
>gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
Length = 347
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 10/291 (3%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRG 93
+I GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+ D+S RRG
Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112
Query: 94 KVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
A L++G S+ G+ + ++ ++Q+ L + + + +
Sbjct: 113 GSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDI 172
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ + I S S L A + N+ +A K Y L +
Sbjct: 173 KFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTFLKLGVYFQII 232
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ GK G+D GK +LP+I Q K K ++ K+
Sbjct: 233 DDIKNIKNKINGKEFGDDLIEGKKSLPIIYFLQEKKFEPKIIAKFNQIKNAQTITEKKEI 292
Query: 271 F---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
++ ++++ ++ A Y + K L P + +K L+++V+
Sbjct: 293 LKLTEMINSSKSIRNSTTIALKYLNEFKTELNLYPLKNRYKNLLIDIVEQI 343
>gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 369
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 10/291 (3%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V
Sbjct: 78 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 137
Query: 101 WGNQTSVLVGDFLLSQAFCM---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + + ++ A L+ L +G+ + +S VT
Sbjct: 138 HGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLRLIDGQAQDISYEHRERVT 197
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A+ + +++ G + AL++YG +LG+AFQ VDD+L G+
Sbjct: 198 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLLGIWGD 257
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK------ISVENLKKAF 271
GK D R K +LPV+ A + D K S E
Sbjct: 258 PEATGKQTWSDLRQRKKSLPVVAALAAQGPASARLGELLAADAKSPDLDGFSEEEFATRA 317
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++ E T A A +L + K L + DF + R
Sbjct: 318 ALIEEAGGREWTTQEARRQHAIAVAALDDVAMPGLVKAQLTALADFVVVRK 368
>gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118]
gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118]
Length = 314
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 26/252 (10%)
Query: 12 MEKVNFLILKRICSDVE---------MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-- 60
+ V + + + D + ++Y + GGKRLRP+L LA +
Sbjct: 17 LAHVESALERWVRPDAATDAEGGAPVELMAAMRYAVLDGGKRLRPLLVLAASEAASGERP 76
Query: 61 -----GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
+ + ACA+E IH +L+HDD +D+ LRRGK + +G +++L GD L
Sbjct: 77 AAANTPEIALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKATVHVKFGEASAMLAGDAL 136
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD--------VTEEDYLHVI 165
+ AF ++ + + LA +TE +
Sbjct: 137 QAMAFELLTPDDDAIPARQQAALCRLLARAAGSAGMAGGQAIDLASVGVALTERQLRQMH 196
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ KT L A++ + + V AL SYG +G+AFQ+VDD+LD + +GK
Sbjct: 197 RLKTGALLQASVMMGAACGDVSAQAEAALMSYGAAIGLAFQVVDDMLDVTADSATLGKTA 256
Query: 226 GEDFRNGKPTLP 237
G+D KPT
Sbjct: 257 GKDADQDKPTFV 268
>gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
Length = 366
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 59/292 (20%), Positives = 114/292 (39%), Gaps = 9/292 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + Y+ GK +R L A + L+ ++ ++A I H A+L+ DD+ D+S
Sbjct: 76 IREPYDYIAALPGKEIRRKLLDAFNVWLKVDEESCEIIARTITMAHNASLMIDDIQDNSQ 135
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147
LRRG A V+G ++ +++ QA ++ K+ A+
Sbjct: 136 LRRGVPTAHRVYGIAQTINAANYVYFQAQQELMRLKNWPQALAIFNDELINLHRGQGMEL 195
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+E DYL +I +KT LF L + + + +G+ FQ+
Sbjct: 196 FWRDNFQPPSEGDYLQMIANKTGGLFRLILRLLQCASTRVV----DITPLANVVGLFFQI 251
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
+DD + + K +D GK + P+ A + R+ + +
Sbjct: 252 LDDYKNMVDDKMAAQKGYCDDLTEGKFSFPICHAIWTESSRKDDILDILRMKTE-DDTLK 310
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
A +R++ + T ++A++ L L + K L ++D ++
Sbjct: 311 ACAVTSLRQSGSFGYTRQVLEQLNKRARELLLDLKVPNPK--LEALLDTLVK 360
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 54/310 (17%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDV 84
E++ + ++Y + +GGKRLRP L +A ++ V +ACA+E +HTA+L+H
Sbjct: 95 PEVLRESMRYSVLAGGKRLRPALAIAACELVGGPAAAAVPVACAVEMMHTASLIHDDMPC 154
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------AL 133
+DD LRRG+ + + +G T++L GD LL+ AF V + +
Sbjct: 155 MDDDPLRRGRPSNHVAFGEPTALLSGDALLALAFEHVARASAGAGVPADRALRAVLELGS 214
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ +A G++ ++ + ++ KTA L AA +++ G + +
Sbjct: 215 AAGVGGIAAGQVADMASQGASSGSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVER 274
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
++ Y LG+ Q+VDDVLD ++GK G+D GK T P ++
Sbjct: 275 VRRYAHFLGLLLQVVDDVLDVTATSEQLGKTAGKDAAAGKATYPRLM------------- 321
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LME 312
+ KA+ L + + L+
Sbjct: 322 -------------------------GMEGARAYMGELLAKAEAELDGFD--AARAVPLLH 354
Query: 313 VVDFCLQRLN 322
+ F R +
Sbjct: 355 LARFMAYRQH 364
>gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
TW08/27]
Length = 354
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 71/348 (20%), Positives = 117/348 (33%), Gaps = 51/348 (14%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHV----LL 67
K++ IL S + YL GGKRLR L A + +N +
Sbjct: 10 KISRFILNNKTSKHT--ESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDI 67
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--------------------- 106
A AIE H A L+HDD++D S RRG A +
Sbjct: 68 AVAIELFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGD 127
Query: 107 ---VLVGDFLLS-----------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
V F S QA ++T + E + V L + +
Sbjct: 128 MLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQ 187
Query: 153 NLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
D I K + L + + G + LK + + +G+AFQ+ +D
Sbjct: 188 LSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLAFQMRND 247
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ GK D + K T+ + LA TK + + + E
Sbjct: 248 IDGAFANDKITGKP-SSDLSSAKHTMLIGLARIHSTKHGRIRLEEILGQADNEEE----I 302
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
I+ E+ AL + E + +A + ++ S K+ L+++ +
Sbjct: 303 RAIVTESGALREAENLIKKWTDQAMEIIKEARLHSMGKEKLIKIASWL 350
>gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
Length = 385
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 25/330 (7%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62
+ + +V+ + + + + E D+ ++++ + GKR+R L LA A ++
Sbjct: 66 SPIAEQIGQVDRRMREILLTGGEF-DDIYRHILTAPGKRVRAGLALACAQLIPSPDAAPV 124
Query: 63 -NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + +AC E H ++L+HDD+ D S LRR + +G + + G L +A ++
Sbjct: 125 HDALDIACVWEMFHESSLVHDDICDGSPLRRDAPSVPAAFGVRRAARAGFHLAGKALQVL 184
Query: 122 IETKSQEALEALSLVACTLAEGELR-----------QLSLSKNLDVTEEDYLHVIKSKTA 170
+ ++ R + + + Y V +KT
Sbjct: 185 ARVIADNPAAFGTVGTAAGVTYLDRLSDLSLGQLVETIPPTVDHRALRGHYARVAAAKTG 244
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
LF A +++ + L Y L AFQ++DDV D +GK+ D
Sbjct: 245 TLFRLACAYGGTAGALEHDRLRDLMDYAERLAFAFQVMDDVRD-VDGGPGLGKDACGDLD 303
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
PT PVI + G + + ++ A+ A +
Sbjct: 304 RRVPTWPVIEWLAEQRAAVDLWLDPATPTGVL--------QSALADSGAIARARAHAVAT 355
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A+ +L P S K+ L + + R
Sbjct: 356 AEAARRALAAFPLSPAKEHLDRLAVRVVTR 385
>gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
Length = 361
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 60/312 (19%), Positives = 115/312 (36%), Gaps = 31/312 (9%)
Query: 42 GKRLRPMLTL--ATALML----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GKR R + + D + L ++E T+ L+HDD++D++ RRG
Sbjct: 50 GKRFRAIAAYMGWVSAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109
Query: 96 AARLVWGNQTSVLVGDF------------------LLSQAFCMVIETKSQEALEALSLVA 137
AA++ + + F SQA + + A +
Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSMENAHRASNLFVTMQ 169
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL------IAGVQNSVR 191
+A G+ LS + + +A V + G +S+
Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLI 229
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L+ + LG+A+QL DD L G+ GK G+D R GK T + LA++ R ++
Sbjct: 230 EQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRLGKRTAQLALAWEMTDDRGRD 289
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
+ ++ + I+ + A + +++++ L +P D+ K+ L
Sbjct: 290 YLMRYWGAPDLTPPIIDNICAIITGSGARRAISDLMNEHLEQSQEFLDAMPCDTEVKRQL 349
Query: 311 MEVVDFCLQRLN 322
+ R +
Sbjct: 350 AAFGSSLVNRAS 361
>gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 611
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 68/309 (22%), Positives = 125/309 (40%), Gaps = 22/309 (7%)
Query: 31 PDVVKY-LIFSGGKRLRPMLTLATALML------EYRGDNHVLL-----ACAIEFIHTAT 78
+ + Y + GGKR RP +TLA L + + L A AIE H A+
Sbjct: 286 TEAISYDWLKHGGKRFRPFITLAAYDALIKAQQADDTAETTYPLGVQKAAMAIEVFHKAS 345
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL---------SQAFCMVIETKSQEA 129
L+HDD+ DD R G+ G ++ +GD+L+ ++A
Sbjct: 346 LIHDDIEDDDQYRYGRETLHRQHGTGMAINIGDYLIGVGYRLLNEARADIGAEAASDLIE 405
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ + + +G S+ ++ D L + KT+ F AAL + G
Sbjct: 406 KMSAAHIRLCEGQGAEMAWQESETFELAPLDALQIYALKTSPAFEAALYAGIRMTGSVGE 465
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ + S+ ++G+ FQ+++D+ D++G+ N G+D +PTL + LA Q ++
Sbjct: 466 YEELISSFSRHIGVGFQILNDLKDWQGDDNNK-LISGQDALAMRPTLLLALALQTADDQQ 524
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K K + + + I ++ E +A++ + + +K+
Sbjct: 525 KADLKDILQGHPSDGARIGRLRQIYQDCDVFNKAEALVDKSRARAEELAENVENEDFKQL 584
Query: 310 LMEVVDFCL 318
LM D L
Sbjct: 585 LMFFCDTVL 593
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + Y + +GGKRLRP++ LA + + + CA+E IHT +L+H +DD
Sbjct: 33 LKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---------AC 138
LRRGK V+G T+VL GD LL+++F ++ S E L
Sbjct: 93 DDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGT 152
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
G ++N VT E+ + + KTA L S + +++A + L+++
Sbjct: 153 EGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIETLRTFS 212
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
++GI FQ+ DD+LD G ++GK +G D N K T P +L
Sbjct: 213 SHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLL------------------ 254
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+L +++ + ++AK + L S K L E+ D
Sbjct: 255 --------------------SLEGAKHKLDVHIKEAKRLIGGL--SLQKDLLYELCDLIA 292
Query: 319 QRLN 322
R +
Sbjct: 293 ARDH 296
>gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14]
gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14]
Length = 383
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 21/329 (6%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALML--EY 59
V+ + + S + + Y + GK +RP L LA A +
Sbjct: 57 ASVDPELRSAVASLPPSMRRIASYHFGWEHADGTPATGNAGKAIRPALVLAAAHAIGGAR 116
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
V A A+E +H TLLHDDV+D RR + V+G+ ++L GD L + A
Sbjct: 117 GRAAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTVWTVFGDADAILAGDALQALALR 176
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFS 174
++ E A A + +A + E Q +VT + L + ++KT L
Sbjct: 177 LLAEDPHPAAPAAAARLAACVVELCAGQHADTALESRAPTEVTLAEVLAMAEAKTGALLG 236
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A V L AG +AL ++G G+AFQL+DDV+ G+ GK G D K
Sbjct: 237 CACAVGGLYAGAAEEEVRALDAFGRQAGLAFQLIDDVIGIWGDPERTGKPAGADLAARKK 296
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+LPV+ A GT + + E ++A + + T+ +A +A
Sbjct: 297 SLPVVAALTSGTPAAAELAELYARPHQEGEE--ERATLAVERAGGRDWTQSQAADRMAQA 354
Query: 295 KDSLR-CLPDSSWKKSLMEVVDFCLQRLN 322
L +PD + L+ + +F +R +
Sbjct: 355 VHELSRAIPDPAAAGGLLALAEFVTRRTS 383
>gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
Length = 345
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 7/253 (2%)
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ 127
E +H +L+HDDV+D RRG+ VWG +++++GD L M+ +
Sbjct: 94 ELMHNFSLVHDDVMDRDVTRRGRATVWTVWGETSAIMLGDALHVLCSRVLAEMLAPEVAM 153
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A+ L L G++ VT + YL + KTA L A E+ +L AG
Sbjct: 154 TAIATLESSFLGLRVGQVDDGDFETPKRVTVDGYLRMAAGKTAGLMGCACELGALTAGAD 213
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
A++ +G +LG+AFQ++DD++ G+ + GK +G D K TLPVI A + G+
Sbjct: 214 PLTVSAMREFGYHLGLAFQILDDIVGIWGDPSVTGKPVGSDLARRKKTLPVIAALESGSS 273
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ + ++ ++ A ++ A A +L PD
Sbjct: 274 AALKLAELYRSTAPMTANDVAWASELIEAAGGRKAARRHADELMDAALTAL---PDQPGS 330
Query: 308 KSLMEVVDFCLQR 320
L+ + + R
Sbjct: 331 ADLIGLAQLVIGR 343
>gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
Length = 263
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 16 NFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+I + + + + + + Y + +GGKRLRP+L L T + IE
Sbjct: 19 EEVIRRWLPEERGFSKTMAQAMNYSMCAGGKRLRPILLLETLRLFGGDEKLAEPFMAGIE 78
Query: 73 FIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ D+ RRG++ V+G VL G LL+ A+ +
Sbjct: 79 MIHTHSLIHDDLPAIDNDDYRRGRLTTHKVYGEAMGVLSGVTLLNYAYETMFRAFELTDD 138
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH---------VIKSKTAVLFSAALEVSS 181
+ + A + + + V E+ + + KT+ L A++ +
Sbjct: 139 KDRVIRAVRIMAEKTGIYGMLGGQSVDVENDGKPLEKDLLDYIYEHKTSALIEASMMAGA 198
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++AG ++ ++G+AFQ+ DD+LD E+GK + D +N + L
Sbjct: 199 VLAGADEEQTSMIEQAASDIGLAFQIQDDILDVTSTSQELGKPVHSDEKNKQSYLCDSFW 258
>gi|149636134|ref|XP_001511694.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase
[Ornithorhynchus anatinus]
Length = 390
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 115/292 (39%), Gaps = 29/292 (9%)
Query: 44 RLRPMLTLATALMLEYRGDNHVLLACAI---------------EFIHTATLLHDDVVDDS 88
++R ++ L + G + L + E IHTA L+H +V+
Sbjct: 100 QMRGLVVLLVSKAAGPSGPATLALDHGMVSGIYPSQRSLAEITELIHTAFLVHRGIVNLG 159
Query: 89 ALRRGKVA-ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
L+ + +GN+ ++L GDFLL+ A + + ++ + +E +S L +G +
Sbjct: 160 ELKTSDGPLKDMQFGNKIAILSGDFLLANACTSLAQLQNTKVVELISSALSDLVQGIYHE 219
Query: 148 LSLSKNLDVTEED-----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
S S + +D + + L + + + + +A +V++ YG ++
Sbjct: 220 NSSSAEENWITDDIGISAWKKQTFLSHSALLAKSCQAAMELARHGATVQEVAFQYGKHMS 279
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
++ ++ D+ + GK+ G + ++ G + + G +
Sbjct: 280 LSHKINSDLQPFVK-----GKSDGSLAFSLNSAPAILHQEFLGREMWMKQIREAQVKGSL 334
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
L++A ++ + + +G KA ++L P S + +L +V
Sbjct: 335 DYSKLREA---IKAGKGVTSAIDLCRYHGNKALEALEHFPPSEARSALANIV 383
>gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 305
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 15 VNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
V + + S + +P + Y + +GGKRLRP+L L A G + LA A
Sbjct: 21 VEEALERLCSSRPKRVPSRLWSAMVYSLTAGGKRLRPVLCLMAAEAFGLEGQRVMPLALA 80
Query: 71 IEFIHTATLLH 81
E IHTA+L+H
Sbjct: 81 FEMIHTASLIH 91
>gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12]
gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12]
Length = 294
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 123/323 (38%), Gaps = 53/323 (16%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E V I+ + I + Y +F GGKR+RP+L T +++ ++A A+E
Sbjct: 10 EHVLEQIINESSVPAQQIHLAMNYSLFPGGKRIRPILVYLTGHLIDVDPQVLDVIAAAVE 69
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
H +L+H +DD LRRGK + + T++LVGD + + A +++ S
Sbjct: 70 LTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLLTHLSPLVH 129
Query: 131 EALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EV 179
+ + G+ LS +TEE + KT L SA + V
Sbjct: 130 PVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHLKTGRLISACIEMV 189
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ V + AL++Y ++G+ FQ+ DD LD+ +GK D N K T +
Sbjct: 190 LAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLDHYAPTELLGKGRSSDLANQKTTFATL 249
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ E + Q A D+L+
Sbjct: 250 YSQ--------------------------------------AKLEEEIVKHYQIANDALK 271
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
+ ++L+++ +R N
Sbjct: 272 LFAQKA--EALLDLTRKLQERSN 292
>gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 54/319 (16%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
+ + + + ++Y GGKRLRP L T + ++ A A+E IH
Sbjct: 21 HFIATLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAY 80
Query: 78 TLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+H +DD LRRG+ + +G ++L GD L + AF ++ + + + L
Sbjct: 81 SLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRL 140
Query: 136 VA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ G+ L + A++ +A +
Sbjct: 141 AMISELAQASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALASGE 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L
Sbjct: 201 TGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLL----- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---- 301
L + +A Q++ SL L
Sbjct: 256 ---------------------------------GLDNARKKAQELYQESLASLDDLVTSS 282
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P L + +F ++R
Sbjct: 283 PIPLNIAPLQALANFIVER 301
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 124/304 (40%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT E + + ACA+E IHT +L+H +DD
Sbjct: 34 LREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +V Q+ L
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ + + ++ K KT L A+ +++AG + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 257 --------IDEAKCILEET-------------IVKAKDAIASLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 360
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 27/304 (8%)
Query: 41 GGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GGKRLR +L L +L D + LACAIE TA L+HDD++D+S LRRGK
Sbjct: 52 GGKRLRALLALDAFDVLAGDVTPDWRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111
Query: 96 AARLVWGNQT------------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+A + + S + + ++ L V
Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVE 171
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALK 195
+++ N + L+V + KTA + A + +L+A + R
Sbjct: 172 IGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCAL 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G LG+AFQL DD+LD G GK IG D R GK T+ + A +K +
Sbjct: 232 AVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIREGKRTVLLADALSAADTADKADLVA 291
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEV- 313
+ + + + AL + R + +++ ++ L +S ++ L E
Sbjct: 292 IFEADCRNDNQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEAC 351
Query: 314 VDFC 317
F
Sbjct: 352 ARFI 355
>gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 66/319 (20%), Positives = 112/319 (35%), Gaps = 54/319 (16%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
+ + + + ++Y GGKRLRP L T + ++ A A+E IH
Sbjct: 21 HFIADLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAY 80
Query: 78 TLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+L+H +DD LRRG+ + +G ++L GD L + AF ++ + + + L
Sbjct: 81 SLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRL 140
Query: 136 VA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ G+ L + A++ +A +
Sbjct: 141 AMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALAAGE 200
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
L Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L
Sbjct: 201 TGRDALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLL----- 255
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
L + +A Q++ SL L SS
Sbjct: 256 ---------------------------------GLDNARKKAQELYQESLASLDDLVASS 282
Query: 306 W----KKSLMEVVDFCLQR 320
L + +F ++R
Sbjct: 283 SIPLNIAPLQALANFIVER 301
>gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
43063]
gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
43063]
Length = 361
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 118/316 (37%), Gaps = 31/316 (9%)
Query: 38 IFSGGKRLRPMLTL--ATALML----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ + GKR R + + D + L ++E T+ L+HDD++D++ R
Sbjct: 46 LLTRGKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKR 105
Query: 92 RGKVAARLVWGNQTSVLVGDF------------------LLSQAFCMVIETKSQEALEAL 133
RG AA++ + + F SQA + + A
Sbjct: 106 RGLPAAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFF 165
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL------IAGVQ 187
+ +A G+ LS + + +A V + G
Sbjct: 166 VTMQAEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGAN 225
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+S+ + L+ + LG+A+QL DD L G+ GK G+D R+GK T + LA++
Sbjct: 226 DSLIEQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRSGKRTAQLALAWEMTDD 285
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSW 306
R +++ ++ + I+ + A + +++++ L +P D+
Sbjct: 286 RGRDYLMRYWGAPDLTPPIIDNICAIITGSGARRAISDLMNEHLEQSQEFLDAMPCDAEV 345
Query: 307 KKSLMEVVDFCLQRLN 322
K+ L + R +
Sbjct: 346 KRQLAAFGSSLVNRAS 361
>gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
Length = 282
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 15/285 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
MK + + K+ + D +KY + +GGKR+RP+L L
Sbjct: 1 MKQIIQEINTRLIKITDCFQDS------KVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLN 54
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+++ ACAIE IHT +L+HDD+ LRRGK + T++L GD LL++A
Sbjct: 55 YHDYLDAACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAA 114
Query: 119 CMVIETKSQEALEA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
++++ L+ + A + L Q K + +
Sbjct: 115 NVILKANYNSELKIALLSILYQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDL 174
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + + + K G +G+AFQ+ DD+LD G +GKN+G D N K
Sbjct: 175 ISASMQMGALVANVNDLETFKEIGYKIGLAFQIQDDILDVVGNSELLGKNVGSDIENNKS 234
Query: 235 TLPVILAFQRGTKREKNFWKS---TINDGKISVENLKKAFIIMRE 276
T ++ ++ + ++ IN KI+ E + + ++
Sbjct: 235 TYVTLMGVEKSQEIADCYFNEATALINKLKINHELILEVLEKLKR 279
>gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
Length = 349
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 18/325 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATALMLEYRGDN 63
V+ + + + I V +Y SG GK +RP L LA A L ++
Sbjct: 26 VDPHLRAAVDTLPGAIRRVARYHFGWQNADGTPASGQAGKAIRPALVLAAARALGGDPES 85
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---- 119
+ A A+E +H TLLHDDV+D+ A RR + A V+G +V+ GD +L+ A
Sbjct: 86 ALRAAVAVELVHNFTLLHDDVIDEDATRRHRPTAWAVFGVPDAVVTGDAVLALAQRLLAE 145
Query: 120 -MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A + ++ + L + LDVT ++ L + +KT L A
Sbjct: 146 DPHPGSARASARLSACVIELCAGQQADCALEEREPLDVTLDECLTMATAKTGALLGCACA 205
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +L AG +A+ +G G+AFQL+DD++ G+ GK +G D K +LPV
Sbjct: 206 LGALYAGADEPAVEAMDGFGREAGLAFQLIDDLIGIWGDTARTGKPVGADLAAHKKSLPV 265
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A GT + + A + + A +A L
Sbjct: 266 VAALTSGTPAADELAVLYRGAMN-TPAEVSGAAAAVDRAGGRDWAQACAADRMARAVHHL 324
Query: 299 R-CLPDSSWKKSLMEVVDFCLQRLN 322
+PD + + L+ + +F +R +
Sbjct: 325 SRAVPDPAAAQDLLALAEFVTRRTH 349
>gi|6831550|sp|Q92236|GGPPS_GIBFU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1524045|emb|CAA65644.1| geranylgeranyl pyrophosphate synthetase [Gibberella fujikuroi]
Length = 418
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 98/285 (34%), Gaps = 3/285 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
++ Y+I GK R L A + L+ + ++ + +H ++L
Sbjct: 120 RSWTDEKENVVRGPYDYVISHPGKDFRAQLIGAFNVWLDVPTSSLEVITRVVGMLHESSL 179
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ G+++ A + + + E + S
Sbjct: 180 LIDDVQDSSELRRGFPVAHNIFGVAQTINSGNYIYFVALQELHKLNNPELITIFSDELVN 239
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L E+ + L + + A
Sbjct: 240 LHRGQGMDLFWCDTLTCPTEEDYLEMVGNKTGGL-FRLGIKLMAAEANGPSPTDCVPLVN 298
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ + K + ED GK + PVI + + T + +
Sbjct: 299 LIGLIFQIRDDYMNLSSKEYSHNKGMCEDLTEGKFSFPVIHSIR--TNPTNLQLINILKQ 356
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + A M + T ++A+ L
Sbjct: 357 KTSDTQIKRYAVAYMESTGSFEYTRKVLSVLIERARKMAEELDQG 401
>gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121]
Length = 288
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + K I + + + Y + +GGKR+RP+L L T ML + A
Sbjct: 5 INEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSAL 64
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL +AF +V +
Sbjct: 65 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLPKAFELVSYDSAL 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-------KSKTAVLFSAALEVS 180
+ + ++ + + LD+ ED I ++KT L + A+ +
Sbjct: 125 SDTKKVKVIQRLAFASGHLGMVGGQTLDMQSEDKAIDISTLESIHRTKTGALLTFAIMSA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 VDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKKVGSDLENDKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + A E + + +A L
Sbjct: 241 ------------------------------VSLLNKGGA----EDKLNYHRNEALKCLDK 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ D +L ++VD R +
Sbjct: 267 ISDQYETTNLRDIVDLFYHRDH 288
>gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22]
gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
scabiei 87.22]
Length = 452
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 118/318 (37%), Gaps = 31/318 (9%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDV 84
++ V ++ + GGK +RP + + + A+E I T L+HDDV
Sbjct: 101 DLADRVARFALD-GGKLMRPRFVWWALRACGGGAAETEAALRVGAALELIQTCALVHDDV 159
Query: 85 VDDSALRRGKVAARLVWGNQTS----------------VLVGDFLLSQAFCMV--IETKS 126
+D S LRRG++A Q + +L GD L+ A +V T
Sbjct: 160 MDASRLRRGRLALHADIAAQYAGGTAPADGARFGEAAAILAGDLALAWADDIVAATLTTP 219
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA----VLFSAALEVSSL 182
L + E Q + + I++ L + +
Sbjct: 220 DTDRAVRELWSVMRTEMVAGQYLDIQGQATSSRSLARAIRAACLKSALYSVERPLALGAA 279
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + +AL S G +GIAFQL DD+ D G GK G D R GKPT V +A
Sbjct: 280 LAGADAARTRALCSAGRCVGIAFQLRDDLGDVFGGPRHSGKPTGGDIRAGKPTYLVAVAQ 339
Query: 243 QRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
R + ++ D ++ L + ++ A E + + L
Sbjct: 340 ARAEAAGDRRALTVLRESLGDAELPENRLAEVVDVLVRTGARDLVEAKIDRLVAQGLRHL 399
Query: 299 RCLP-DSSWKKSLMEVVD 315
P ++ ++ L E++
Sbjct: 400 DSAPLETEGRRRLRELLH 417
>gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
sp. H13-3]
gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
sp. H13-3]
Length = 324
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 71/340 (20%), Positives = 125/340 (36%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLA 52
M E + + L+ + + ++ + + D +++ + +GGKRLRP L +
Sbjct: 25 MTNFETKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPFLVIE 84
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ +L + + A+E +H +L+H +DD LRRG+ + T++L G
Sbjct: 85 STALLGGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAG 144
Query: 111 DFLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYL 162
D LL+ AF ++ ++ + G ++ E +
Sbjct: 145 DSLLTLAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDEAGII 204
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT L A E ++IAG S RQ L+ +G +G+AFQL DD+LD + MG
Sbjct: 205 TLQAMKTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTADAATMG 264
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T + R
Sbjct: 265 KATGKDAARGKGT--------------------------------------LVALRGEDW 286
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + L P L+ F +R +
Sbjct: 287 ARLKLQEQVAEASELLA--PYGEKAAILIAAARFIAERKS 324
>gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum
CQMa 102]
Length = 331
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 105/278 (37%), Gaps = 5/278 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E+I YL+ GK +R + A L D ++ I +H A+LL DD+ D
Sbjct: 37 EEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPVDKLEVIKRIIMLLHNASLLIDDIQD 96
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRG + ++G ++ ++ A + + +A E + +L G+
Sbjct: 97 SSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTEELLSLHRGQGM 156
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + E+ S + ++ + + + LG+ FQ
Sbjct: 157 DIYWREASKCPTEEEY---FSMVSHKTGGLFRLAIRLMQLASDKNCDFVPLVNVLGVIFQ 213
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ + + K GED GK + P+I + + + S + V+
Sbjct: 214 IRDDYLNLQSHAYTVNKGFGEDLTEGKYSFPIIHSIR--SDPTNIQLSSILKQRTTDVDV 271
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
A ++ + + + +A+ ++ + +S
Sbjct: 272 KLFAVECIKATGSFEHCKEKIDELVAEARQLIKEMGNS 309
>gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb01]
gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb01]
Length = 407
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 107/310 (34%), Gaps = 21/310 (6%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R L A L ++ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + +S A+ L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEEYLEMVGNKTGGL---FRLAIKLMQAESDTEIDCVALANLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K + ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYTKNKGLCEDLTEGKFSFPIIHSIRSHPDNLQLIS--ILKQKTRDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS----------------SWKKS 309
+ A M + T +KA + L + +
Sbjct: 326 VKRYAVSYMESTGSFAYTRKTVIQLREKALLLIDGLEKAAEHGPRADQTGERSGDPVRTI 385
Query: 310 LMEVVDFCLQ 319
L ++VD +
Sbjct: 386 LNKMVDATVN 395
>gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 70/339 (20%), Positives = 119/339 (35%), Gaps = 57/339 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M ++ N ++ I S + + ++Y GGKRLRP L T +
Sbjct: 1 MTDFSAQLNAHYQRTNRMLGHFITSLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ ++ A A+E IH +L+H +DD LRRG+ + +G T++L GD L +
Sbjct: 61 DMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEATAILAGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165
AF ++ + + + L + G+ L +
Sbjct: 121 LAFSILADAPMTQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVNLAALERIHR 180
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A++ +A + L Y +G+AFQ+ DD+LD G+ GK
Sbjct: 181 HKTGALIRAAVRLGALAAGDAGRDALPYLDRYANAIGLAFQVQDDILDVVGDSATTGKRQ 240
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + GK T P +L L +
Sbjct: 241 GADQQLGKSTYPSLL--------------------------------------GLDNARK 262
Query: 286 RAYSYGQKAKDSLRCL----PDSSWKKSLMEVVDFCLQR 320
+A Q++ SL L P L + +F ++R
Sbjct: 263 KAQELYQESLASLDDLVASSPIPLNIAPLQALANFIVER 301
>gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Mesorhizobium loti MAFF303099]
gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase
[Mesorhizobium loti MAFF303099]
Length = 305
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
V L+ + + + + + +++ + +GGKRLRP L + +A + G+
Sbjct: 18 AAVEVLLRRLLDDRPLSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAA 77
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-- 120
+ +A A+E +H +L+H +DD LRRG+ + T++L GD LL+ AF +
Sbjct: 78 LRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIVA 137
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++ L G + ++ E + + KT L
Sbjct: 138 SEATVLPADRRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIITLQAMKTGALIR 197
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A E ++IAG R+ L +G +G+AFQL DD+LD + +MGK G+D GK
Sbjct: 198 FACEAGAIIAGAPAEDRERLAEFGSAIGLAFQLADDLLDLTADAGQMGKATGKDAAAGKG 257
Query: 235 TLPVILAFQRGTKREK 250
TL + +
Sbjct: 258 TLVALHGANWAHSQLH 273
>gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
Length = 372
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 67/340 (19%), Positives = 127/340 (37%), Gaps = 41/340 (12%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHVLLACAIEFIH 75
+RI + + D V+ ++ +GGKRLR + R + A+E
Sbjct: 34 ERISPEAGALVDAVERMV-AGGKRLRAAFCYWSWRAHGGTPGDGREQGVLRAGAALELFQ 92
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQT-----------------------SVLVGDF 112
A L HDDV+DDS+ RRG A V+ ++ +++ D
Sbjct: 93 AAALFHDDVMDDSSTRRGLPTAHRVFADEHAGSGRRGEPRRFGDGVAILLGDLALIASDE 152
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-----S 167
+++A + + +Q A S + + G+ L T +D +
Sbjct: 153 EMTRALAGLPVSVAQAAHSVFSSMRTEVTVGQYLDLVAQTMPWGTADDDERRAREVVRAK 212
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + + +AG ++ ++ G+ LG AFQL DD+L G+ GK G+
Sbjct: 213 SARYSVEHPIVLGAALAGADDAAVAGCRAVGLPLGEAFQLRDDLLGVLGDPATTGKPAGD 272
Query: 228 DFRNGKPTLP----VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
D R GK T+ + A G + + D + + + ++ A+ D
Sbjct: 273 DLREGKRTVLVARALAHATAAGDDAAVALLQRGVGDPDLDAAGVAELTDLLVRTGAVADV 332
Query: 284 EYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFCLQRL 321
E + + P+ + +L+E+ ++R
Sbjct: 333 EQIIEELWAQTLTQIEARDWPE-PARGTLVELAHAAVRRT 371
>gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
Length = 264
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 51/300 (17%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91
++Y GGKRLRP L AT ML A AIE IH +L+HDD+ LR
Sbjct: 1 MEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----------CTLA 141
RG+ + +G ++++L GD L + AF ++ + + + +
Sbjct: 61 RGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMC 120
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L+ E A++ SA + + AL + +
Sbjct: 121 GGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAI 180
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD G+ +GK G D + GK T P ++
Sbjct: 181 GLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYPALM--------------------- 219
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
L + +A+ Q++ D+L L S +L + F ++R
Sbjct: 220 -----------------GLDNARIKAWDLCQESLDALDTLAAQSYNTTALRALASFVIER 262
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 124/304 (40%), Gaps = 51/304 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L AT E + + ACA+E IHT +L+H +DD
Sbjct: 34 LREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDDLPCMDD 93
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------- 138
LRRGK V+G +VL GD LL+ AF +V Q+ L
Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALELAKAAGP 153
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ + + ++ K KT L A+ +++AG + L ++
Sbjct: 154 EGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFA 213
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+AFQ+ DD+LD G E+GK IG D N K T +
Sbjct: 214 KYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFT----------------- 256
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +A I+ E KAKD++ L + L+ + D
Sbjct: 257 --------IDEAKCILEET-------------IVKAKDAIASLQLQD--EYLLSICDLIA 293
Query: 319 QRLN 322
+R N
Sbjct: 294 KRNN 297
>gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica]
Length = 392
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/307 (18%), Positives = 118/307 (38%), Gaps = 6/307 (1%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E++ + +++ Y+ S GK +R ++ LE ++ A+
Sbjct: 88 ERIEVDFDHWTEAKEKVVTGPYDYIAASPGKEIRSLMLACFNAWLEVPAQRLEVIKRAVG 147
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+HTA+LL DD+ D+S LRRG+ A ++G ++ + + A + ++ ++
Sbjct: 148 MLHTASLLIDDIQDNSELRRGRPVAHKIFGPAMTINSANHMYFLALQELNALETPGVVDI 207
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ L G+ L + L E + S ++ + +++V
Sbjct: 208 FTDELLRLHRGQAMDLYWRETLTCPTEADYFEMTSNKTGGL---FRLAYRLMKAESAVSV 264
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L LG+ FQ+ DD + K +GED GK + P+I + T
Sbjct: 265 DLMPVVELLGVLFQVADDYKNLCSREYGDLKGVGEDLTEGKFSFPIIHTIR--TNPADLQ 322
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLM 311
+ + + + + A +M + + T + +++ + K K+L
Sbjct: 323 LLNILRERPTNDHVKRYAIELMEKTGSFRYTRGVLKKLATQVHEAVHLMDQGRGKGKALF 382
Query: 312 EVVDFCL 318
E++D
Sbjct: 383 ELMDRIT 389
>gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 72/340 (21%), Positives = 129/340 (37%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLA 52
M E ++ K L+ + + + + + +++ + +GGKRLRP L +
Sbjct: 5 MTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIE 64
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ +L + + + A+E +H +L+H +DD LRRG+ + T++L G
Sbjct: 65 SVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAG 124
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--------KNLDVTEEDYL 162
D LL+ AF ++ + A E + + +LA + E+ +
Sbjct: 125 DSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGII 184
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT L A E ++IAG + RQ L+ +G +G++FQL DD+LD + MG
Sbjct: 185 TLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAATMG 244
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T + R
Sbjct: 245 KATGKDAARGKGT--------------------------------------LVALRGEAW 266
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + L P L+ F +R +
Sbjct: 267 AREKLQEQVAEASELLA--PYGEKAAILIAAARFIAERKS 304
>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius ATCC
35311]
gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase (farnesyldiphosphate synthase)/
geranylgeranyl pyrophosphate synthetase [Melissococcus
plutonius ATCC 35311]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 11/248 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M K ++++ + I S + + + Y I +GGKRLRP+L LAT
Sbjct: 1 MNDFTIFKQKHIDRIEKEMANFIESHTSDQSLKKAMLYSIQAGGKRLRPLLLLATINSFN 60
Query: 59 YRGDN-HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E +HT +L+HDD+ +D+ LRRGK ++G ++L GD LL+
Sbjct: 61 CPIEQGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLT 120
Query: 116 QAFC------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF + K + + ++ V + KT
Sbjct: 121 GAFQLLALSTIEAGKKILLTQLLGQTAGTEGMVAGQSGDLQGEKKALNLQELSEVHRKKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + ++A + LK G+AFQ+ DD+LD G + GK IG D
Sbjct: 181 GALIEFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQGKKIGRDQ 240
Query: 230 RNGKPTLP 237
K T P
Sbjct: 241 CLNKSTYP 248
>gi|326468439|gb|EGD92448.1| geranylgeranyl pyrophosphate synthetase [Trichophyton tonsurans CBS
112818]
gi|326482590|gb|EGE06600.1| geranylgeranyl pyrophosphate synthetase [Trichophyton equinum CBS
127.97]
Length = 382
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 100/270 (37%), Gaps = 5/270 (1%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y + GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRR
Sbjct: 72 PYSYTVNQPGKDIRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVEDSSHLRR 131
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ QA + + KS EA+ L G+ L
Sbjct: 132 GAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGMDLYWRD 191
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L E+ + ++ + ++SV +G+ FQ+ DD L
Sbjct: 192 TLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESSVPIDCVPLVDLMGLMFQVCDDYL 248
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ K + ED GK + PVI + + + + + E K A
Sbjct: 249 NLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLIN--ILKQKTNDNEVKKYAVK 306
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
M + T A KA + L
Sbjct: 307 YMESTGSFEYTRKVAIELRDKAFLLIDELE 336
>gi|281350998|gb|EFB26582.1| hypothetical protein PANDA_005594 [Ailuropoda melanoleuca]
Length = 302
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/300 (17%), Positives = 111/300 (37%), Gaps = 30/300 (10%)
Query: 44 RLRPMLTLATALMLEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDS 88
+LR ++ L + N LA E IHTA L+H +V+ +
Sbjct: 12 QLRGLVVLLISKAAGPSSMNTSCQKYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLN 71
Query: 89 ALRRGKVA-ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
L+ + +GN+ ++L GDFLL+ A + ++ + +E L+ L +G +
Sbjct: 72 ELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHE 131
Query: 148 LSLSKNLDVTEED-----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
S S + ED + L + + + + +A V+ YG ++
Sbjct: 132 NSTSAKENHITEDIGISAWKKQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMA 191
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
++ ++ D+ + E + V+ G + G++
Sbjct: 192 MSHKINSDLQPFIKEKTSDSMAFNLNSA-----PVVLHQEFLGRELWIQQIGEAQEKGRL 246
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K ++ + + +G KA ++L+ P S + +L +V F + R +
Sbjct: 247 ---DYAKLRETIKAGKGVTSAIDLCRYHGNKALEALQSFPPSEARSALENIV-FAVTRFS 302
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 57/328 (17%)
Query: 12 MEKVNFLILKRICSDVEMIP------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + +I +++ E + + Y + +GGKRLRP++ LA + +
Sbjct: 9 LAERKNVIEQQLSVYTERLNMPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGI 68
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ CA+E IHT +L+H +DD LRRGK V+G T+VL GD LL+++F ++
Sbjct: 69 PVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS 128
Query: 124 TKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S++ L G +++ V+ E+ + + KTA L +
Sbjct: 129 HVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEELESIHERKTAKLLA 188
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ +++A + + L+++ ++GI FQ+ DD+LD G ++GK +G D N K
Sbjct: 189 FSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTTNDKS 248
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T P +L +L + + + + A
Sbjct: 249 TYPSLL--------------------------------------SLDGAKNKLADHMKAA 270
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KD + L S K+ L ++ D R +
Sbjct: 271 KDLISGL--SLQKELLYDLCDLIAARDH 296
>gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum]
gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 6/289 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
SD++++ + Y+ S GK R L + L+ + ++ ++ +H ++LL DD
Sbjct: 9 KSDLQLL-EPYSYICESSGKGFRNTLIKSFDFWLKVGDERVKDISQVVQGLHVSSLLIDD 67
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D+S LRRGK A ++G ++ +F+ F S EA L G
Sbjct: 68 IEDNSKLRRGKPVAHSIYGIPQTINSANFVYFLIFNDCNRLGSPEATSIFIEEVIRLHRG 127
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + E + ++ + + +LG+
Sbjct: 128 QGYDILWRDTNKSPSEQEYMKMVNEKTGGLFRLGLRLLQC---FSENKTNYIELVEDLGM 184
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+Q+ DD+++ E K+ ED GK + P+I A T + S
Sbjct: 185 YYQIRDDLINLDSEDYHQNKSFCEDISEGKFSFPIIHAINADTNDNRLLRILKQKTEDRS 244
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
V + A ++ +L T+ +K + L + LME
Sbjct: 245 V--KQHALDYIKSMGSLEYTKNVLKGLREKILKQIEGLGGNPILVKLME 291
>gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
Length = 293
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 49/331 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML+ + +E +N + I S + + ++Y + +GGKR+RP+L L T +L
Sbjct: 1 MLKKSMNELIEIINNNLDGIIKSSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNEN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+++F
Sbjct: 61 YKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDALLTKSF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAV 171
++ K+ +A + +++ + + S+N + + K+KT
Sbjct: 121 ELIANDKNLDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L ++ ++ IA V + L + +LG+ FQ+ DD+LD G+ ++GK +G D N
Sbjct: 181 LLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKKLGKKVGSDVEN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T ++ ++ A E + +
Sbjct: 241 HKSTY----------------------------------VSLLGKSGA----EEKLKYHK 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A D++ L + L+E+VD R +
Sbjct: 263 DAAIDTINQLKPQYDVEPLLEIVDLFYSRDH 293
>gi|39974191|ref|XP_368486.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
gi|145018310|gb|EDK02589.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
Length = 412
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 106/284 (37%), Gaps = 6/284 (2%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
YL+ GK R + +A LE ++ L+ + +HTA+LL DDV D+S+LRRG
Sbjct: 132 YLLGQPGKDFRTQIIMAFNAWLEVPSESLELITHVVGMLHTASLLVDDVEDNSSLRRGLP 191
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A ++G ++ +++ A + + + EA+ + L G+ L L
Sbjct: 192 VAHSIFGVPQTINSANYIYFAALQELKKLSNPEAVSIFAEELIHLHRGQGMDLFWRDTLT 251
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
ED + + + +++ +G+ FQ+ DD +
Sbjct: 252 CPTEDDYLEMVGNKTGGL---FRLGIKLMQAESAFPTDCIPLANLIGLIFQIRDDYQNLF 308
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
K + ED GK + PVI + + + + + A M
Sbjct: 309 SREYSNNKGMCEDLTEGKFSFPVIHSIR--SNPANLQLLNILKQKTTDEGVKNYAVSYME 366
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCL 318
+ + T+ ++A+ L K + +++D +
Sbjct: 367 KTGSFEYTKKVLTVLIERARKVTDELDAGRGKCSGIHKLLDKMV 410
>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
Length = 293
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 68/329 (20%), Positives = 128/329 (38%), Gaps = 53/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L + + + S + + + ++Y + +GGKR+RP+L L T ++ +
Sbjct: 7 IEHLRNSIENWLG---SYFKDK-GSYNKKVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDD 62
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A A+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL++
Sbjct: 63 FEKVLPIASAVEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGM 122
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSK-------NLDVTEEDYLHVIKSKTAV 171
+++++ E + + + + N + + ++ KT
Sbjct: 123 SIMLKSCMNEQHNFIKACSFIAESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGA 182
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ A++ +++ + L+ YG LG+AFQ+ DD+LD G+ +GK D N
Sbjct: 183 IIKASIIAGAILGEAPKRDIENLEYYGQKLGLAFQIKDDILDIVGDTEVLGKKAKSDLDN 242
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T L S
Sbjct: 243 NKTTFITTY--------------------------------------GLNKCIEMCNSIT 264
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + L + S L ++ F L R
Sbjct: 265 AECIEVLDNI--SGDTSKLKDLTLFLLNR 291
>gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 361
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 118/316 (37%), Gaps = 31/316 (9%)
Query: 38 IFSGGKRLRPMLTL--ATALML----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ + GKR R + + D + L ++E T+ L+HDD++D++ R
Sbjct: 46 LLTRGKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKR 105
Query: 92 RGKVAARLVWGNQTSVLVGDF------------------LLSQAFCMVIETKSQEALEAL 133
RG AA++ + + F SQA + + A
Sbjct: 106 RGLPAAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFF 165
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL------IAGVQ 187
+ +A G+ LS + + +A V + G
Sbjct: 166 VTMQAEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGAS 225
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+S+ + L+ + LG+A+QL DD L G+ GK G+D R+GK T + LA++
Sbjct: 226 DSLIEQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRSGKRTAQLALAWEMTDD 285
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSW 306
R +++ ++ + I+ + A + +++++ L +P D+
Sbjct: 286 RGRDYLMRYWGAPDLTPPIIDNICAIITGSGARRAISDLMNEHLEQSQEFLDAMPCDAEV 345
Query: 307 KKSLMEVVDFCLQRLN 322
K+ L + R +
Sbjct: 346 KRQLAAFGSSLVNRAS 361
>gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC
25291]
Length = 1804
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 76/346 (21%), Positives = 129/346 (37%), Gaps = 55/346 (15%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ ++ GGK LRP L++AT L L + + A +E H A L+HDD+ D+S
Sbjct: 1457 LYQLILDYPLRGGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESW 1516
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLVACTL 140
RRGK + G +V VGD +LS + +++ + A
Sbjct: 1517 WRRGKPTLHIDHGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVD 1576
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGM 199
+ S + + DYL +++ KT+ + ++ AG L+S G
Sbjct: 1577 GQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLESLGR 1636
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+LG AFQ+ DD+L+ R + E GK IG D GK TL ++ + ++ ++
Sbjct: 1637 HLGAAFQITDDLLNLRADPQEYGKEIGGDLWEGKRTLMLLHTLRHAEPGDQERAVQILSR 1696
Query: 260 GKISVE---NLKKAFIIMRENR-----ALVDTEYRAYSYG-------------------- 291
+ S + +L + + + E R +
Sbjct: 1697 RRPSPDAEFDLTELLDRLTAGGQLSVSGRTEIEARLRRHHHSEVKSLNDIRWLYELMHRV 1756
Query: 292 ---QKAKDS--------------LRCLPDSSWKKSLMEVVDFCLQR 320
A+D L P S + L +VD+ R
Sbjct: 1757 GSLNHARDVAVRQARQAAAVLAGLDWFPRSRHRDMLAALVDYVHGR 1802
>gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
Length = 295
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 123/310 (39%), Gaps = 19/310 (6%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E++ I + + + + + GK LR L LA +
Sbjct: 2 LEQIAQRIQQFLAQVQSAEVERMAN--LLGQGKMLRSKLILAIC----PEHPQLIDFCAI 55
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IE I +A+LLHDDV+D++ RR + ++GNQ ++++GD ++AF + + ++ A
Sbjct: 56 IEMIQSASLLHDDVIDNAQTRRAHDSINHIFGNQNAIMLGDVFYAKAFLELTKLDTEIAQ 115
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
V ++ + D D I S + + A +
Sbjct: 116 LVAHSVME----LSRGEIKDVRASDTFHTDITRYIDIIQDKSASLMVASCAGAALLGGLD 171
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
QA +++G+N GIAFQ++DD+LD +GK DF+ GK TLP IL Q +
Sbjct: 172 SQAYRTFGLNFGIAFQIMDDLLDITQPKEVLGKPAFSDFKEGKSTLPYILLHQHLDPSNQ 231
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
++ + L + + Y +A +++ +L
Sbjct: 232 ERLQACFK--NADEQALAWCAQQFEAHHIAPKVLEHIHHYAHRALQAIKG------HSAL 283
Query: 311 MEVVDFCLQR 320
+V ++R
Sbjct: 284 EKVASSLIER 293
>gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 362
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 15/322 (4%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDN 63
V+ + + + + + + Y + GK +RP + LA + R +
Sbjct: 40 VDPALRAAVDTLPDSMRLISGYHLGWLEADGAPSAVGAGKSIRPAMVLAATTAVGGRPQD 99
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC---M 120
V A A+E +H TLLHDDV+D RR + A V+G ++L GD + S A
Sbjct: 100 AVRAAAAVELVHNFTLLHDDVIDRDHTRRHRPTAWRVFGTTGAILAGDAMHSLALRVLAE 159
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ A+ L+ L G+ S + DVT + L + + KT L A +
Sbjct: 160 DPHPAAAAAVRRLADCVVELCAGQQADCSFEQRTDVTLAECLTMAEGKTGALLGCACALG 219
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+L AG A+ ++G +G+AFQL+DD++ G+ GK +G D K +LPV+
Sbjct: 220 ALYAGADAETADAMDAFGREIGLAFQLIDDLIGIWGDPAVTGKPVGADLAARKKSLPVVH 279
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLR 299
A GT +S L A + +
Sbjct: 280 ALSSGTPAGAELAALYATGRPLSPTELAAAADAVDRAGGRGWAQTESCDRMAAAIAHLAA 339
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
+PD S L+ + + +R
Sbjct: 340 AVPDPSGADDLLALAELVTRRT 361
>gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603]
gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603]
Length = 292
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + K I + + + Y + +GGKR+RP+L L T ML + A
Sbjct: 9 INEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSAL 68
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++AF +V +
Sbjct: 69 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSYDSAL 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-------KSKTAVLFSAALEVS 180
+ + ++ + + LD+ ED I ++KT L + A+ +
Sbjct: 129 CDAKKVKVLQRLAYASGHLGMVGGQTLDMQSEDKKIDISTLESIHRTKTGALLTFAIMSA 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 189 VDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKKVGSDLENDKSTY---- 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
I+ ++ A E + + +A L
Sbjct: 245 ------------------------------VSILNKDGA----ENKLNYHRNEALKCLDN 270
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ D +L ++VD R +
Sbjct: 271 ISDQYETTNLRDIVDLFYHRDH 292
>gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988]
Length = 352
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 72/344 (20%), Positives = 117/344 (34%), Gaps = 41/344 (11%)
Query: 9 LKDMEKVNFLILKRICSD------------VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
+ +V + + + V + D + LI SGGKR+RP + L
Sbjct: 18 ADLLHRVEDRLRSLLAVERDAWAAVHEQAVVPV--DALSELIASGGKRIRPAFCITGYLA 75
Query: 57 LEYRGDN--HVLLACAIEFIHTATLLHDDVVDDSALRR----------------GKVAAR 98
V A+E +H + L+HDDV+DDS+ RR G
Sbjct: 76 AGGDPAEPGIVAAGAALEMLHLSALVHDDVLDDSSSRRGVPTVHTQAMALHESSGWQGEP 135
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+G ++LVGD L + ++ E + E L + + + + ++
Sbjct: 136 RRYGEGVAILVGDLALVYSEELMAEAPRRVLPEWNKLRSEVMIGQYMDVHAAAEFSVDPR 195
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
L L V + + + AL+ YG +G AFQL DD+LD
Sbjct: 196 SSRLIARIKSGRYTIHRPLVVGAKRGRGRGDLAPALEEYGEAVGEAFQLRDDLLDASATP 255
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
E GK G DF K TL + A QR + + + +
Sbjct: 256 AETGKPTGLDFTQHKMTLLLGWAMQRDEHIHTLVTEPGHTP--------DEVRRRLLDTG 307
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
D E ++ ++ P D W+ L + R
Sbjct: 308 VPADVERHIAGLVERGCKAIADAPVDQVWRGELAAMAGRVAYRT 351
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 131/321 (40%), Gaps = 52/321 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + +M+ D +KY + GGKR+RP+L L T + + + +AC
Sbjct: 8 EEINVWLNNYFENKGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMAC 67
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD LL++A ++
Sbjct: 68 AIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLN 127
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-------FSAALEVS 180
++AL + + + +D+ E I + + +++
Sbjct: 128 NDIKALKASKIISEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++ N L +G LG+AFQ+ DD+LD G+ +GK + +D N K T
Sbjct: 188 AILGDAPNEDVNILDEFGEKLGLAFQIKDDILDVIGDEKILGKEVHKDKENNKTTFISEF 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + + ++ L+
Sbjct: 248 --------------------------------------GLEGCKEMCVNLTEECLKLLKQ 269
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
+ ++ L + +F ++R
Sbjct: 270 IKSNTG--ELENITEFLMKRQ 288
>gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
Length = 274
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 4 LEDLTLKDMEKVN---FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-----L 55
+ +K++ ++ I ++ S V D+ Y GKRLRP LT +A
Sbjct: 6 ISIPIIKELNQLELELKNIASKLDSTVT--QDIFTYFFSIPGKRLRPTLTFLSAGAISSE 63
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ N + L+ ++E IH+A+L+HDD++D LRRG+ +GN+ +VL GD L S
Sbjct: 64 LTSSAKHNLIQLSISLELIHSASLIHDDIIDGDLLRRGQKTLNKTFGNKIAVLAGDALYS 123
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A E ++ + ++ + N E Y +I KTA SA
Sbjct: 124 RA---FTIFSDTLPREFAQVMGRVTESMSVAEILNANNPSPDRETYFKIILGKTASFMSA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
+ IA L YG NLG+A+Q++DD +D
Sbjct: 181 CCRLGGSIAYAPYEESNMLSKYGENLGMAYQILDDYID 218
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
T + + AK S+ L DS++K+SL+ +VD+ L
Sbjct: 228 TIEEGFEFAYNAKASIENLKDSAYKQSLIMLVDYVLD 264
>gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
Length = 313
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 26/260 (10%)
Query: 15 VNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + S + + +KY + +GGKRLRP+L LA L+ N +LL
Sbjct: 17 FENFLNSQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGA 76
Query: 70 AIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
++E IHT +L+HDD+ RRG + T++L GD L S AF + + +
Sbjct: 77 SLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVE 136
Query: 128 EALEALSLVACTLAEGELR------------QLSLSKNLDVTEEDYLHVIKSKTAVL--- 172
L + Q+ + + I+
Sbjct: 137 NGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDSTNQSDKIEMLQLTHRLK 196
Query: 173 ----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+AL + + + +L YG +LG+ FQ+ DD+LD G +GK G+D
Sbjct: 197 TGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVEGTQESLGKTPGKD 256
Query: 229 FRNGKPTLPVILAFQRGTKR 248
++GK T P++ R K
Sbjct: 257 QKSGKITYPMLFGMDRCKKM 276
>gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
K85]
gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
K85]
Length = 282
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRG 61
+ ++ LI + E++ D V +L+ +GG RP+ T+ A + + G
Sbjct: 11 QFTANVHDGIARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDG 70
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ AIE +H TL HD VVD+S + R + W N ++L GD+ + A
Sbjct: 71 WEVTVAGAAIELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQ 128
>gi|315047945|ref|XP_003173347.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
118893]
gi|311341314|gb|EFR00517.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
118893]
Length = 368
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 100/270 (37%), Gaps = 5/270 (1%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRR
Sbjct: 64 PYSYMVNQPGKDIRGQLIAAYNRWLQVPEESLTVITKVVVMLHTASLLIDDVEDSSHLRR 123
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ A + + K+ EA+ L G+ L
Sbjct: 124 GAPVAHNIFGIPQTINSANYVYFLALEEIQKLKNPEAINIFVNELMNLHRGQGLDLYWRD 183
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L E+ + ++ + ++SV +G+ FQ+ DD L
Sbjct: 184 TLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESSVPIDCVPLVDLMGLMFQVCDDYL 240
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ K + ED GK + PVI + + + + + E + A
Sbjct: 241 NLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRSQPENRQLIN--ILKQKTNDNEVKQYAVK 298
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
M + T A KA + L
Sbjct: 299 YMENTGSFEYTRKVAVELRDKAFVLIDELE 328
>gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb03]
Length = 407
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 109/310 (35%), Gaps = 21/310 (6%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R L A L ++ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + ++ A++ L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEEYLDMVGNKTGGL---FRLAIKLMQAESGTEIDCVALANLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K + ED GK + P+I + + S + E
Sbjct: 268 QICDDYLNLSNSTYTKNKGLCEDLTEGKFSFPIIHSIRSHPDN--LQLISILKQKTRDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKA---KDSLRCLPDS-------------SWKKS 309
+ A M + T ++A D+L + +
Sbjct: 326 VKRYAVSYMESTGSFAYTRKTVIQLRERALLLIDALEKAAEHGPGADQTGERSGDPVRTI 385
Query: 310 LMEVVDFCLQ 319
L ++VD +
Sbjct: 386 LNKMVDATVN 395
>gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 350
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 67/331 (20%), Positives = 114/331 (34%), Gaps = 31/331 (9%)
Query: 16 NFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACA 70
+L + +++ + + Y GKRLR D V A A
Sbjct: 27 ETALLLAVDAELAPVAEQLRTATAY-----GKRLRAAFCYWGWRAAGQPDSDALVRAAAA 81
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVA-ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H A ++HDD++D SALR G + + S A + S
Sbjct: 82 MELVHAAAVVHDDLIDGSALRHGLPTAQFALRAAVSGRRRPAAARSLALLVGDLLMSWAG 141
Query: 130 LEA----------------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ +A L GE ++ + + + +
Sbjct: 142 QLFVSSGLPAAYLSRARPLWAALARELIAGECLEILRTGAVPDVRDSLKVIRYKTAKYTV 201
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
L + +AG +R+A YG+ LG AFQL DD+L GE GK +D +
Sbjct: 202 EQPLLIGGALAGASPDLREAFSDYGLPLGEAFQLRDDLLGLFGETARTGKANADDITGRR 261
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT+ + + R T E+ K + + + L + IM A E +
Sbjct: 262 PTVLLAETWSRATPAERKHLKGLLGRR-LDEDGLGEVRAIMGRTGAPERVEDMIAQRVRA 320
Query: 294 AKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
A + LP +L ++ + R +
Sbjct: 321 ATAVVEQTRLPA-DATHALTDLAATAVHRRH 350
>gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
M21/2]
gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
M21/2]
gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3]
Length = 293
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD-- 83
+ + +Y + GGKR+R +LTL+ ML A A+E +H +L+HDD
Sbjct: 28 EESEVCRAARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDLP 87
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+D+ LRRG+ + + T++L GD LL++AF ++ + + + A G
Sbjct: 88 CMDNDDLRRGRPSCHKAFSESTAMLAGDVLLTEAFEVIANASATPQICVAAARALGAGAG 147
Query: 144 ELRQLSLSKNLDVT------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+ + EE + ++KT L +AA+++ + AG + L SY
Sbjct: 148 SRGMVYGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKILASY 207
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
LG+ FQ+VDDVLD ++GK IG D NGK T + + +
Sbjct: 208 AYGLGLVFQIVDDVLDVTSTPEQLGKPIGSDSENGKTTFVTLYGTDGAMVLAQKLNEQIC 267
Query: 258 ND 259
ND
Sbjct: 268 ND 269
>gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 351
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 67/317 (21%), Positives = 117/317 (36%), Gaps = 28/317 (8%)
Query: 13 EKVNFLIL-------KRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLE-YRGD 62
E+V+ ++ +R + ++ V L + GKRLR +
Sbjct: 13 ERVDDVLRVFVAREAERFAAVDPVLDPVAGQLESSAAHGKRLRAAFCYWGWRATGQPDDE 72
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV------------------WGNQ 104
+ V A ++E +H A ++HDD++DDS LR G A +
Sbjct: 73 SLVRAAASMELVHAAAVVHDDLIDDSPLRHGLPTAHMALRGAARGRPRSVSAGRSLAMLV 132
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+L+G A + A S +A L GE ++ + T + +
Sbjct: 133 GDLLMGLAGQLFATSGLPAAYLARARPLWSALARDLIAGECLEILRTGAAPDTADSLKVI 192
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
L + +AG VR +YG+ LG AFQL DD++ G + GK
Sbjct: 193 RYKTAKYTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDDLVGLFGSPQDTGKA 252
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+D R +PT + ++ E+ ++ + G + L+ A +M A E
Sbjct: 253 ATDDLRGNRPTALLAETWRVADDGERRQLRALLGRGDPGPDGLRAARELMLRLDAPGRVE 312
Query: 285 YRAYSYGQKAKDSLRCL 301
++A +L L
Sbjct: 313 KMITERVEEALTALDAL 329
>gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 339
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 34/297 (11%)
Query: 10 KDMEKVN--FLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
D+ + L+ + + + +V+Y + GK LRPM+TL A + +
Sbjct: 14 DDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRD 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-- 121
+ A E++H ATL+HDD++D LRRG+ A + +G +++ GD L+ AF +
Sbjct: 74 VLAAALGTEYLHVATLVHDDIIDADTLRRGRPAVPVAYGIPGAIVAGDHLIFHAFQAMVE 133
Query: 122 -----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A+ AL+ L G+ + L +LD Y +I+ KT LF A
Sbjct: 134 SGRAVPAASVVAAVTALAEAGQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAV 193
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +L+ G V L YG ++G AFQ+ DD+L Y + GK D NG+PTL
Sbjct: 194 CHIGALLGGADPLVASGLARYGEHVGTAFQIRDDLLSYLSTPEQTGKPATSDLNNGRPTL 253
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA----LVDTEYRAYS 289
P+ + IS + ++ A +
Sbjct: 254 PL-----------------LLAYDAISDAARVELLAVLHRRGAGPGDVEWVTALLRE 293
>gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Acyrthosiphon pisum]
Length = 338
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 7 LTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---- 60
L D+ V I + + ++ + + + Y GK LRPM+ + A + Y
Sbjct: 87 LLDDDLRDVYTDITRELELNTNQDELRTIATYYFDGQGKALRPMVAILMAHAINYHMNNN 146
Query: 61 --GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+A E IH+A+L+HDDV+D S RRGK + +W ++ + GD++L+
Sbjct: 147 GLDKKQREVAMIAEMIHSASLIHDDVIDQSDFRRGKPSVNALWSHKKVAMAGDYILAVTS 206
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
M+ + LS + L +GE QL + + YL KTA L + +++
Sbjct: 207 MMIARLNHNDVTITLSQIITDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSVK 266
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++AG + + YG N+G+AFQLVDD+LD+ + MGK D + G T PV
Sbjct: 267 AEAMLAGADDQLVDVSFEYGRNIGLAFQLVDDLLDFVSSKDAMGKPTAADLKLGLATAPV 326
Query: 239 ILAF 242
+ A
Sbjct: 327 LFAC 330
>gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6]
Length = 296
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 73/330 (22%), Positives = 127/330 (38%), Gaps = 52/330 (15%)
Query: 5 EDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + + + + +Y + GGKR+R +L LA ML
Sbjct: 7 KKQYDEYLARAEKALNQACERYLPEGSDVCRAARYSLLGGGKRIRAVLVLAVCDMLHGNA 66
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E +H +L+HDD +D+ +RRGK + +G T++L GD LL++AF
Sbjct: 67 EAAEQFAAAVEMLHCYSLIHDDLPCMDNDDMRRGKPSCHKAFGESTAMLAGDVLLTEAFE 126
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT------EEDYLHVIKSKTAVLF 173
V + ++ + A G + + EE + + KT L
Sbjct: 127 AVAGAPTPASVCVHAAQALGAGAGSRGMVYGQELDLKYEALAAAEEQLRLIHRHKTGALI 186
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+AA+++ A R+AL++Y +G+ FQ+VDDVLD G ++GK IG D NGK
Sbjct: 187 NAAIQMGGAAAQADEVQRKALEAYAYGIGLVFQIVDDVLDVTGTAEQLGKPIGSDSENGK 246
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T + + A +
Sbjct: 247 TTFATLF--------------------------------------GVDGAMQLAEKLNDE 268
Query: 294 AKDSL-RCLPDSSWKKSLMEVVDFCLQRLN 322
+L + S L ++ L R +
Sbjct: 269 TCTALRDAFGEKSA--FLEQLARTLLNRRS 296
>gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776]
gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM
3776]
Length = 634
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/305 (21%), Positives = 126/305 (41%), Gaps = 28/305 (9%)
Query: 38 IFSGGKRLRPMLTLATALMLEYR--------------GDNHVLLACAIEFIHTATLLHDD 83
+ GGKRLRP +TLA L +A AIE H A+L+HDD
Sbjct: 301 LQHGGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDD 360
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---------SQEALEALS 134
+ D+ R GK +G ++ +GD L+ + +V ++ + +
Sbjct: 361 IQDNDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAA 420
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ +G Q S S D+T + + + KT+ F AAL +AG + + +
Sbjct: 421 HMKLCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYAEMI 480
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ +LG+AFQ+++D+ D+ G+ G+D ++ +PTL +A++ ++
Sbjct: 481 TQFSRHLGVAFQILNDLSDWLGDD-HNKLVAGQDAQSMRPTLLWAMAWEAAAPADREELL 539
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + + + +A + +K++ + L DS L E++
Sbjct: 540 RVASSTYSPHAKFEAFKRVFEKLGIF----TKAQTLVEKSRARVETLADSVHPDPLRELL 595
Query: 315 DFCLQ 319
F +
Sbjct: 596 YFVID 600
>gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 332
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 26/260 (10%)
Query: 15 VNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + S + + +KY + +GGKRLRP+L LA L+ N +LL
Sbjct: 36 FENFLNSQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGA 95
Query: 70 AIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
++E IHT +L+HDD+ RRG + T++L GD L S AF + + +
Sbjct: 96 SLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVE 155
Query: 128 EALEALSLVACTLAEGELR------------QLSLSKNLDVTEEDYLHVIKSKTAVL--- 172
L + Q+ + + I+
Sbjct: 156 NGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLK 215
Query: 173 ----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+AL + + + +L YG +LG+ FQ+ DD+LD G +GK G+D
Sbjct: 216 TGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVEGTQESLGKTPGKD 275
Query: 229 FRNGKPTLPVILAFQRGTKR 248
++GK T P++ R K
Sbjct: 276 QKSGKITYPMLFGMDRCKKM 295
>gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. mediasiatica FSC147]
gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 293
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 33/316 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+KD E + ++ + + + Y FSGGKR+R A L N +
Sbjct: 6 IIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKI 65
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E IHT +L+HDD+ LRRGK + + T++L GD L + AF ++ +
Sbjct: 66 AFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDIN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + + + LD+ E+ I+
Sbjct: 126 YSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQI---------LHTNKT 176
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + Y ++ Q+ D ++ + + + K T
Sbjct: 177 AKMFRVCIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTN--------- 227
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
GK S +++ L D + + L +++
Sbjct: 228 ------------ELGKTSAKDIDANKSTYVSLMGLKDANKYLLDKKNEITQIITKLKNNN 275
Query: 306 W-KKSLMEVVDFCLQR 320
+ SL ++D + R
Sbjct: 276 FSSTSLENLIDLVINR 291
>gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
Length = 347
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 10/291 (3%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRG 93
+I GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+ D+S RRG
Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112
Query: 94 KVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
A L++G S+ G+ + ++ ++Q+ L + + + +
Sbjct: 113 GSAIHLIYGTDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDI 172
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ + I S S L A + N+ +A K Y L +
Sbjct: 173 KFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTFLKLGVYFQII 232
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ GK G+D GK +LP+I Q K K ++ K+
Sbjct: 233 DDIKNIKNKINGKEFGDDLIEGKKSLPIIYFLQEKKFEPKIIAKFNQIKNAQTITERKEI 292
Query: 271 F---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
++ ++++ ++ A Y + K L P + +K L+++V+
Sbjct: 293 LKLTEMINSSKSIRNSTTIALKYLNEFKTELNLYPLKNRYKNLLIDIVEQI 343
>gi|149046944|gb|EDL99692.1| rCG58492, isoform CRA_b [Rattus norvegicus]
Length = 329
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 106/300 (35%), Gaps = 41/300 (13%)
Query: 44 RLRPMLTLATALMLE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+LR ++ L + LA E IHTA L+H +V+ S
Sbjct: 50 QLRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLS 109
Query: 89 ALRRGKVA-ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
L+ + +GN+ +VL GDFLL+ A + ++ + +E L+ L +G ++
Sbjct: 110 ELQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQE 169
Query: 148 LS-----LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
S D+ + L + + + + +A +V+ YG ++
Sbjct: 170 NSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMA 229
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
++ ++ D+ + + K + +
Sbjct: 230 MSHKINSDLQPFIKDKASDSKTFNLNSAP-------------------VVLHQEFLGRDL 270
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ + + ++ + + +G KA ++L P S + +L +V F + R +
Sbjct: 271 WIKQIGELRETIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 329
>gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 397
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 105/290 (36%), Gaps = 4/290 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
++ +I + Y+ GK +R L A + +A + H A+LL DD
Sbjct: 101 AANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQPCQAIAATVGMAHNASLLIDD 160
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG A V+G ++ +++ A + ++ ++ +
Sbjct: 161 IQDSSKLRRGVPCAHEVYGVAQTINSANYVYFLAQDQLFRLRNWPQAISVF--NEEMVNL 218
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
Q D + A ++ + + ++ LG+
Sbjct: 219 HRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMAVRLLQTSSRHVVDVEQLVDVLGL 278
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ++DD + + E K ED GK + P+ A + G K +
Sbjct: 279 YFQILDDYKNVKEEKMAAQKGFFEDLTEGKFSFPICHAIREGNKNRDMLLHMMRLKTE-D 337
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLME 312
+E +A I+ +L T Y +KA+ LR + + ++L++
Sbjct: 338 LEVKLEAVRILEAAGSLDYTREVLYGLDRKARSLLRDFKAPNPFMEALLD 387
>gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca
wickerhamii]
Length = 195
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
E + ++Y + GGKR+RP L LA ++ + + ACA+E IHT +L+H
Sbjct: 98 PERLHSAMRYSLLGGGKRVRPALCLAACELVGGCLEVAMPAACAVEMIHTMSLIH 152
>gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
Length = 311
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 10/294 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + + + KY GK R L L++ L +++ A
Sbjct: 2 DWLAELNAVYQREMPHSPSSLAVAAKYHFTHPGKSFRAQLALSSGCSLGLSTTDNLHWAA 61
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E +H A+L+HDD+ D S RRG+ + +G ++ +GD+++++AF + +
Sbjct: 62 ACELLHNASLIHDDISDASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGARNSQHGS 121
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ L A Q++ D I + A + +A +
Sbjct: 122 VLVALLAQAMQATCSG-QIADISQRQCAGLDEWQCIATGKTAPLLIAPIRGAAVAAGLKA 180
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
L+ G+A+Q +D+ D + G R
Sbjct: 181 DLSGLEHLVGLCGLAYQGRNDIDDIIPSSHRSSDLDGRKPNLVISLFAQQGIGCEAFGRW 240
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E L + + ++ + +A+ + LPD
Sbjct: 241 YQ---------SDDTEQLVHWQRRIAASDVILQANQLVDDWLLQAEQLVHSLPD 285
>gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 240
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM------GKNIGEDFRNGKPTLPVILAFQ 243
+ +YG N+GIAFQL+DD+LDY GK G D + G T P + A+
Sbjct: 107 WKDIAYAYGRNVGIAFQLIDDILDYESTSTPGSADLTLGKPGGADLQLGLATGPALYAW- 165
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
E I +++ A ++ + + T+ A + +KAK+ L LP+
Sbjct: 166 ----EEFPEMGELIGRKFEGPGDVEMARSLVHRSSGVHRTKLLAKEFAEKAKEVLDELPE 221
Query: 304 SSWKKSLMEVVDFCLQRLN 322
S K+ L+ + + + R +
Sbjct: 222 SVAKRGLVALTERVVGRRS 240
>gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99]
Length = 296
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 50/334 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
MK++ + +E+ N + I + ++Y + +GGKR+RP+L LAT ML+
Sbjct: 1 MKVMNQNLNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLD 60
Query: 59 YRG-DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
++ ++ + +A A+E IHT +L+H +DD LRRGK V+G ++L GD LL+
Sbjct: 61 HQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSK 168
+AF + T +A ++L+ + + S+N ++ E + K
Sbjct: 121 KAFEKIALTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESIHIHK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A+E +++I ++ + Q L + +LG+ FQ+ DD+LD G ++GK +G D
Sbjct: 181 TGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAKLGKPVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T ++ E A E
Sbjct: 241 VTNHKSTY----------------------------------VTLLGEKGA----EQELQ 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ QKA+ L L L ++ QR N
Sbjct: 263 AHIQKAEAILTSLSTEFDTTDLNYLLTLFYQRQN 296
>gi|162286815|emb|CAP47201.1| putative geranylgeranyl diphosphate synthase [Aspergillus flavus]
Length = 340
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 7/280 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
++I V YL+ GK +R L A L+ D ++A + +HTA+LL DD+
Sbjct: 52 KEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLKIPEDRLNIIAEIVGLLHTASLLIDDIQ 111
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ ++ A + E +A E + L G+
Sbjct: 112 DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQG 171
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L + TEE+Y+ +I +KT LF A+++ +++ V LGI
Sbjct: 172 MDLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKL----MQLESEVTSDFLGLVDLLGII 227
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD + + ++ K ED GK + +I + ++ + SV
Sbjct: 228 FQIRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLIIHSINSNLGNQQLLNILRQRSEEESV 287
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ A +R + + R S +AK + L ++
Sbjct: 288 --KQYAVEYIRSTGSFAYCQDRLASLLHEAKMMVNVLEEN 325
>gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
Length = 329
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 12/294 (4%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVV 85
+++ GGK +R L LA+A + + LA +E L+HDD+
Sbjct: 26 SAMLRDYPERGGKGIRSELLLASARAHGALPSTSAWEGALWLAAGLELFQNWVLIHDDIE 85
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DDS RRG+ A ++G ++ VGD L + + V LE + AEG+
Sbjct: 86 DDSEERRGRPALHRLYGVPVAINVGDALHASMWAAVHRAGVPGGLEEFLNMVWRTAEGQH 145
Query: 146 RQLSLSKNLDVTEEDYLHVIKSK-TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L+ + + ++ + L++ + + + + G LG A
Sbjct: 146 LDLTWVQERSWNLGEADYLAMVRLKTALYTVVVPLRLGALAAGVLPDERFTAAGEALGAA 205
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW--KSTINDGKI 262
FQ+ DDVL+ G+ + GK IG D GK TL V+ + ++ + + +
Sbjct: 206 FQIRDDVLNLAGDPAKYGKEIGGDLWEGKRTLIVLHWLAHAPEEQRQVFLEQMRRDRADK 265
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAK----DSLRCLPDSSWKKSLME 312
+ + E+ ++ + A + ++ ++L PD ++L+
Sbjct: 266 DAAAIAAIHRWLLESGSVQYAQAYADTQAREGLARLTEALENAPDPQAARALLA 319
>gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
Length = 296
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 101/240 (42%), Gaps = 10/240 (4%)
Query: 6 DLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+L K +E N L++ R S + + + GGKRLRP L L A + +
Sbjct: 14 NLVTKSLE--NRLVINRTESPALGRLRAAMAHGALGGGKRLRPFLVLEAASIFGADDEAA 71
Query: 65 VLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---- 118
+ A AIE +H +L+HDD+ RRG+ + + ++L GD LL+ AF
Sbjct: 72 LPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILAGDGLLTDAFALLT 131
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ L +A Q+ E + + + KT L AA
Sbjct: 132 EEGTYTAPTACRLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVGIQRRKTGALIEAAA 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +++ S AL+ Y +G AFQ+VDD+LD E+GK G D GK T
Sbjct: 192 VMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILDETASSAELGKPAGVDGAAGKATFV 251
>gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL
J2-003]
Length = 129
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + + ++ + K I + + + Y I +GGKR+RPML AT L+
Sbjct: 1 MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALK 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
V A A+E IHT +L+HDD+ +D+ RRGK V+G+ T++L GD LL+
Sbjct: 61 VNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTL 120
Query: 117 AFC 119
AF
Sbjct: 121 AFS 123
>gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris]
Length = 312
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 11 DMEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
+++ + I R+ S + +++ ++ + GKR+RP+L L A L +
Sbjct: 14 ELQSMRKTIENRLDSLLPQTEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLGCAPAHP 73
Query: 64 -HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E IH A+L DD+ +D++A+RRG+ +G ++L LLS+AF
Sbjct: 74 GLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALLSKAF 131
>gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus
gallus]
Length = 420
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 102/271 (37%), Gaps = 5/271 (1%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG A ++
Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIEDNSKLRRGFPVAHSIY 203
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
G + + +++ V+ +A++ + L +G+ + E
Sbjct: 204 GIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGLDIYWRDTYTCPTEAE 263
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+ + + ++ ++ LK LG+ FQ+ DD + +
Sbjct: 264 YKAMVLQKTGGLFGLAVGLMQL---FSNYKKDLKPLLNTLGLFFQIRDDYANLHSKEYSE 320
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
K+ ED GK + P I A +K E ++ + +++ K + +
Sbjct: 321 NKSFCEDLTEGKFSFPTIHAIW--SKPESTQVQNILRQRTENIDIKKYCVHYLENVGSFE 378
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
T +A + L + +L+E
Sbjct: 379 YTRNTLKELESEAYKQIESLGGNPELVALVE 409
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEY 59
MK +E+V +K SD + + + ++Y I +GGKR+RP+L +AT A +
Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTSD-QRLFESMQYSIQAGGKRIRPLLLVATVAAFHKP 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ A
Sbjct: 60 INTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAA 119
Query: 118 FCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F +V + + + L L +N + E+ + + + KT
Sbjct: 120 FQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSIHERKTGE 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++A V L + ++G+AFQ+ DD+LD E+GK + D
Sbjct: 180 LIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDEL 239
Query: 232 GKPTLP 237
K T P
Sbjct: 240 AKSTYP 245
>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 15 VNFLILKRI-CSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ +L + V + + +KY + +GGKRLRPML LA L+ + V A A+E
Sbjct: 18 IEQRLLPALEQQGVPENLYESMKYSLMAGGKRLRPMLVLAVLEALDKPIERGVAFAVALE 77
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+H +DD LRRGK V+G T++L GD LL++AF + E
Sbjct: 78 MIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTRAFAYIAEAYMDRTD 137
Query: 131 EALSLVAC-----------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + T G ++ + + + + KT L AAL
Sbjct: 138 VSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQLEFIHRHKTGDLLIAALRG 197
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+A +AL YG+ +G+AFQ+ DD+L+ G+ E+GK +G D K T P
Sbjct: 198 GGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGDAQELGKAVGSDADREKATYP 255
>gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021]
gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21]
Length = 163
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 9 LKDMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++++V I + + S + + +KY + GGKR+RP L AT ML
Sbjct: 5 SEELQQVQTRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEK 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+HDD+ LRRG + + T++L GD L S AF
Sbjct: 65 QTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE 124
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 119/303 (39%), Gaps = 51/303 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR+RP+L A + ++ +ACA+E IH +L+HDD+
Sbjct: 38 RLHEAMRYAVLGGGKRVRPLLAHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMD 97
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC---------MVIETKSQEALEALSLVA 137
LRRGK + + T++L GD L + AF + A++ +
Sbjct: 98 DDVLRRGKPTVHVEFDEATALLAGDALQTLAFQVLAERPLGTDPANQLAMLNQLAIASGS 157
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
+A G+ L+ EE I A++ +A L + + L Y
Sbjct: 158 RGMAGGQAIDLASVGKRLGREELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLDHY 217
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+G+ FQ+VDD+LD + +GK G+D N KPT +L
Sbjct: 218 AKVVGLLFQVVDDLLDAEADTATLGKTAGKDADNDKPTYVSLL----------------- 260
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
LVD A +A+ SLR + + L ++ D+
Sbjct: 261 ---------------------GLVDARRLAEEMLDEARASLRPFGARALR--LEQLADYI 297
Query: 318 LQR 320
+ R
Sbjct: 298 VHR 300
>gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16]
gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16]
Length = 295
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 79/336 (23%), Positives = 140/336 (41%), Gaps = 55/336 (16%)
Query: 1 MKMLEDLTLKD-MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
M L L++ + V+ + + + ++ + + + Y + +GGKR+RP+L LA
Sbjct: 1 MSALFQTFLEEARQLVDKKLPEYVRELEAEH-RLKEAMLYSLEAGGKRVRPVLLLAVLEA 59
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + ACAIE +HT +L+H +DD LRRG+ V+G T++L GD LL
Sbjct: 60 YNQPILHGLDTACAIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALL 119
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIK 166
+Q+F ++ + + + + L++ + L + V K
Sbjct: 120 TQSFALIANADAPLSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQLANVHK 179
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
KT L + ++E +LIAGV N R L +G +G+ FQ+ DD+LD G+ +GK +G
Sbjct: 180 RKTGELLAFSIEAGALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGDSIAIGKPVG 239
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D N K T P +L L +
Sbjct: 240 SDAVNNKSTYPGLL--------------------------------------GLDGAKTM 261
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+++ +A L L L ++ + + R +
Sbjct: 262 LHTHYDRALQVLDEL--HLRGTLLEDLAKYIVTRDH 295
>gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
IFM 10152]
Length = 383
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/321 (20%), Positives = 116/321 (36%), Gaps = 30/321 (9%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVV 85
D ++ + GGKR RP L D + A+E + L+HDD++
Sbjct: 62 ADALEAFVLRGGKRTRPAFAWTGWLGAGGSPTAPEADAVLTACAALELVQACALVHDDII 121
Query: 86 DDSALRRG----------------KVAARLVWGNQTSVLVGDFLLSQAFCMVIET----- 124
D S RR +G ++L+GD L+ A MV +
Sbjct: 122 DSSRTRRRFPTVHVDFEQRHRERGWTGDPAHFGVSVAILIGDLALAWADDMVHASGLDAA 181
Query: 125 -KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A + L L + D E A L + + I
Sbjct: 182 AIGRFAPVWALMRTEVLGGQLLDINGEAGRDDSVEAALRINRYKTAAYTVERPLHLGAAI 241
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + A +++G ++G+AFQL DD+L G+ GK G+D R GK T+ + A +
Sbjct: 242 ADADAELVAAYRTFGTDIGVAFQLRDDLLGVFGDPEVTGKPSGDDLREGKRTVLLAEALR 301
Query: 244 RGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
R + ++ E +++ ++ + A+ D E R + +L
Sbjct: 302 RADATDPAAASLLRTSIGTDLAAEEVERLRAVLIDLGAVDDVERRIADLTDRGLAALETS 361
Query: 302 PDSS-WKKSLMEVVDFCLQRL 321
+ K++L + +R
Sbjct: 362 SAAPAAKQTLRGMALAATRRT 382
>gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
Length = 468
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G ++GI FQLVDD+LD+ ++GK G D G T PV+ A++
Sbjct: 343 QCYEFGKDIGICFQLVDDMLDFTVSAKDLGKPAGADLELGIATAPVLYAWKADPSLGP-- 400
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLM 311
I ++++ + + + T+ A Y +A +L + LP+S + +L
Sbjct: 401 ---LIQRNFSQPGDVEQTAEAVANSNGVFKTKKLAEKYRDQALQNLRKALPESDARSALE 457
Query: 312 EVVDFCLQR 320
+ + L R
Sbjct: 458 FLTNSILTR 466
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L +M + I+ I S ++ V Y + GK++RP
Sbjct: 44 SLVSNEMNTLAKNIMALIGSGHPVLNRVTSYYFEAEGKKVRP 85
>gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 293
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 55/327 (16%)
Query: 11 DMEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
D++ V + + S + + + Y +F+GGK++R LT+A + + + +
Sbjct: 7 DIKLVADKTDQYLKSYFSQQKQNNELFEAMGYGLFAGGKKIRSYLTVAAFDLFDIKEETA 66
Query: 65 VLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A AIE +H+ +L+HDD+ RRGK + +G T++L G+ LL+ AF ++
Sbjct: 67 IAVAAAIECVHSYSLIHDDLPSMDNDDFRRGKESTHKKFGESTAILAGNSLLTIAFEILT 126
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKTAVLFSAAL 177
E S + LA +D +I +
Sbjct: 127 SNHLNLDKEVKSDLVFALASCSGHLGIAGGQFLDLSFEGKAQDEKTIIHMQNKKTGELMG 186
Query: 178 EVSS--LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ I +N+ R+ LK G+++G+ FQ+ DD+LD G+ N++GK +D + GK T
Sbjct: 187 FCTEAAAIVAKKNNDREELKKIGLDIGLLFQIADDLLDVYGDQNKLGKPSKQDDKKGKAT 246
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L L T A K K
Sbjct: 247 LIATF--------------------------------------GLDKTNVLANELHDKIK 268
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
SL + + L+ +F L+R +
Sbjct: 269 QSLEKYGTKANR--LLSSAEFILKRDH 293
>gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
Length = 282
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 109/321 (33%), Gaps = 51/321 (15%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M + + S + D ++Y + +GGKR+RP L LA LA A
Sbjct: 3 MPDFEDYLTHCLDSVPASRVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAA 62
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ- 127
IE IHT +L+HDD+ LRRG + +G ++L GD LL+ AF ++T
Sbjct: 63 IEMIHTYSLIHDDLPAMDNDTLRRGMATCHVKYGEDVAILAGDGLLTYAFAQAMKTACPA 122
Query: 128 -----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + L I +
Sbjct: 123 DELVEICRLLSDYSGAGGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGA 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ + + G ++G++FQ+ DD+LD V E+GKNI D N K T +
Sbjct: 183 LLAGHKADLPVWEMIGADIGLSFQIQDDILDVTSTVEELGKNINSDAENEKSTYVTLQ-- 240
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + A Y ++A L L
Sbjct: 241 ------------------------------------GIEKAKQDADFYYRRAITQLDSLK 264
Query: 303 -DSSWKKSLMEVVDFCLQRLN 322
D+ K L D ++R N
Sbjct: 265 LDTEPVKKLF---DQLMKRKN 282
>gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi]
Length = 197
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+GE QL + + Y KTA L + +L+ ++++G + + YG NL
Sbjct: 22 QGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSFQYGRNL 81
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ VDD+LD+ MGK D + G T PV+ A ++ +
Sbjct: 82 GLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPELNPMIL-----RRF 136
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++++A+ ++ +++ L T + A + +A + +S ++K L+ V DF L R+
Sbjct: 137 REPGDVERAYELVHQSQGLEQTRFLARKHCIEALRLASQISESPYQKGLIVVGDFVLNRM 196
>gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119]
gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119]
Length = 296
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 50/334 (14%)
Query: 1 MKM-LEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MKM L+ + +E +N + I S + + ++Y + +GGKR+RP+L L T +L
Sbjct: 1 MKMMLKKSMNELIEIINNNLDGIIKSSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLEVL 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL+
Sbjct: 61 NENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSK 168
++F ++ K+ +A + +++ + + S+N + + K+K
Sbjct: 121 KSFELIANDKNLDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHKAK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L ++ ++ IA V + L + +LG+ FQ+ DD+LD G+ ++GK +G D
Sbjct: 181 TGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKKLGKKVGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N K T ++ ++ A E +
Sbjct: 241 VENHKSTY----------------------------------VSLLGKSGA----EEKLK 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A D++ L + L+E+VD R +
Sbjct: 263 YHKDAAIDTINQLKPQYDVEPLLEIVDLFYSRDH 296
>gi|242012483|ref|XP_002426962.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus
corporis]
gi|212511191|gb|EEB14224.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus
corporis]
Length = 383
Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/342 (14%), Positives = 108/342 (31%), Gaps = 43/342 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR------PMLTLATALM 56
L L ++ + + K + S+ ++ K L+++G R ++ L +
Sbjct: 48 SLRWLLSDEIANIALHLRKLVGSNHPLLKTA-KSLLYNG----RNNMQAWGLIVLLISKA 102
Query: 57 LE-------------YRGDNHVLLACAIEFIHTATLLHDDVVD--DSALRRGKVAARLVW 101
+ LA E I T+ L+H +V+ V + +
Sbjct: 103 AGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGLVNIYPGLYSETSVLNDMTF 162
Query: 102 GNQTSVLVGDFLLSQAF---------CMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
GN+ ++L GD+LL A +V S + S
Sbjct: 163 GNKIALLSGDYLLGNACAELAGLRNQSLVELMSSAIRDLTEGEFIGPRDKQNNPMPSPPG 222
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
E++ L + + + + G ++ +G +L +A+Q D+
Sbjct: 223 PPGTAMEEWTLRNVLSAGSLLGKSCQGTLQLGGHGPKFQEQGFCFGKHLALAWQACLDLE 282
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ E N + + G + + K
Sbjct: 283 PFLPESQYSKGNPFDLTSAPVLLHLEYDPSLY--------REIEKGKGSVFDVDYTKLQE 334
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
I+ ++ A+ DT+ + KA D L+ +S + +L ++
Sbjct: 335 IISDSPAIEDTKNCKKVHSNKAMDVLQSFQESDARTALSNII 376
>gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
Length = 367
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 92/283 (32%), Gaps = 22/283 (7%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR- 98
+GGK LRP+ + D V A A+E +H L+ DDV+D SALRRG+ A
Sbjct: 62 AGGKCLRPLFAYVGWRCGQPESDAAVRAAAALELLHCFALVQDDVMDGSALRRGRTALHV 121
Query: 99 ----LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
+ F S A +
Sbjct: 122 RFARWHEEQGWAGSAPRFGESAAILFGDLFLVWSEQMLRESGLAAEQLARGWGHYDAMRA 181
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-----------------Y 197
++ ++ A+ L +VR+ L+ +
Sbjct: 182 ELAVGQLADLVNDARALPSWDTLLDVLRRKSGNYTVRRPLEFGAALAGCGPELMAGLGEF 241
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
G +G AFQL DD+L G+ GK G+D R K + V+LA +R + + +
Sbjct: 242 GGLVGEAFQLRDDLLGVFGDPAVTGKPAGQDLRERKASSVVVLAAAMADRRRQAEFAELL 301
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ E + + ++ A KA ++
Sbjct: 302 ELETVDDEAVARWRELIVATGARDRMGELIRERADKALAAIDP 344
>gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 290
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 15 VNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + +R+ + + +++ + GGKRLRP LT+ TA +L +
Sbjct: 1 MEVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALA 60
Query: 67 LACAIEFIHTATLLH 81
IE +H +L+H
Sbjct: 61 AGGGIELVHCYSLVH 75
>gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC198]
gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC033]
gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC033]
gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
NE061598]
Length = 293
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 33/316 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+KD E + ++ + + + Y FSGGKR+R A L N +
Sbjct: 6 IIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKI 65
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E IHT +L+HDD+ LRRGK + + T++L GD L + AF ++ +
Sbjct: 66 AFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDIN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + + + LD+ E+ I+
Sbjct: 126 YSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQI---------LHTNKT 176
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + Y ++ Q+ D ++ + + + K T
Sbjct: 177 AKMFRACIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTN--------- 227
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
GK S +++ L D + + L +++
Sbjct: 228 ------------ELGKTSAKDIDANKSTYVSLMGLKDANKYLLDKKNEITQIITKLKNNN 275
Query: 306 W-KKSLMEVVDFCLQR 320
+ SL ++D + R
Sbjct: 276 FSSTSLENLIDLVINR 291
>gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis
mellifera]
Length = 210
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+GE QL + + YL KTA L + L+ +++A + + + YG N+
Sbjct: 35 QGEFMQLGSKETENERFAHYLTKTYRKTASLIANTLKAEAMLADADDQLAELAFQYGRNI 94
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQLVDD+LD+ + MGK D + G T PV+ A +R +
Sbjct: 95 GLAFQLVDDLLDFVSTLPTMGKPTAADLKLGLATAPVLFACERYPELNAMIM-----RRF 149
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+++KAF ++ +++ L T + A + +A + L +S ++K L V D L R
Sbjct: 150 QEPGDVEKAFELVHKSQGLEHTRFLARKHCVEAMKLAQSLAESPYQKGLQVVCDLVLNRT 209
>gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches]
Length = 335
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 20/250 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS-GGKRLRPMLTLATA---------- 54
L + V+ I + SD ++ V KY + GGK++RP + L +
Sbjct: 45 ALVKDSISSVSDNIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSRAAEAERAAD 104
Query: 55 -----LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
EY + LA E IHTA+LLHDDV+D++ RRG + V+G++ S+L
Sbjct: 105 QSTFPKSPEYIAASQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKMSILA 164
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL--DVTEEDYLHVIKS 167
GDFLL+++ + +S EA+E +S L +GE+ Q+ + E YL
Sbjct: 165 GDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHADKNGAISPFEYYLRKNYY 224
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L + + + S ++ V + +YG +LG+AFQL+DDVLDY+G G+ +
Sbjct: 225 KTGSLMANSCKASLILGEHSERVCELGFAYGRHLGLAFQLIDDVLDYKG--QNTGQPMLA 282
Query: 228 DFRNGKPTLP 237
D + G T P
Sbjct: 283 DLKAGLTTAP 292
>gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
Length = 315
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 10/243 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ + + ++ + + + + D ++Y GGKRLR L ATA D+
Sbjct: 29 MTEPLARYQTRIETALSRALPPAGARLADAMRYATLGGGKRLRAALLYATADDFGVPPDS 88
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLL 114
ACA+E IH +L+HDD+ + + + LL
Sbjct: 89 VDAAACAVEAIHAYSLIHDDLPAMDDDDLRRGRPSTHRAFDEATAILAGDALNTLAFALL 148
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + +Q A + + G++ ++ + +T + + KT L
Sbjct: 149 ANSPLPPATRLAQIQTLADAAGWAGMIGGQMGDMAATG-KTLTLPQLQAIHRGKTGALIR 207
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AAL + +L A + L G +LGIA+Q+ DD+LD +GK G+D GK
Sbjct: 208 AALHLGALPAADYAAHAATLDELGEHLGIAYQIADDILDATANSATLGKTAGKDAAQGKN 267
Query: 235 TLP 237
T P
Sbjct: 268 TYP 270
>gi|225629764|ref|ZP_03787710.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591383|gb|EEH12477.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 76
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIP-DVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L+D+ D+ +N + K + + + D++ +L+ SGGK++RP L ML Y
Sbjct: 10 DKLDDIVSSDLSAMNDFVFKNVNDEDAKLAADIISHLVRSGGKKIRPKLVFIICKMLNYS 69
Query: 61 GDNHVL 66
G+N +
Sbjct: 70 GENRIN 75
>gi|332031509|gb|EGI70981.1| Decaprenyl-diphosphate synthase subunit 2 [Acromyrmex echinatior]
Length = 393
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/337 (14%), Positives = 106/337 (31%), Gaps = 37/337 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR-----PMLTLATALML 57
L L ++ + + K + S+ ++ K +I++G R ++ L +
Sbjct: 63 SLRWLLSDEIANIALHLRKLVGSNHPILKTA-KAIIYNG----RNTQAFGLILLLISKAA 117
Query: 58 EYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+ + LA E I T+ L+H +V+ + + +GN+
Sbjct: 118 GHLNAKPIEEDKAAGVLHSQRALAEITEMIRTSNLIHRGLVNINIDTGSTELNNITFGNK 177
Query: 105 TSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
++L GD+LLS + + K+Q+ + L Q ++ +
Sbjct: 178 IALLCGDYLLSTSCIEIAALKNQDLLLLISTAVRDLCQAEFVARRDNQNFPIPSIPPEDC 237
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ + + A + + + L
Sbjct: 238 TDYALKEWTLLNTYGAGSLLGKSCQSTLKLAGHSKEIEEKGYEFGKHLALAWQASLDLGL 297
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIMREN 277
+ K+ G + + ++ G SVEN+ K I+
Sbjct: 298 CINKDKGILQNLCAAPIMFHVEHDPSL-------LIELDKGLDSVENVDYLKVLDIVTTG 350
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ T+ + QKA + L +S +K+L ++
Sbjct: 351 PGIGLTKELVKKHSQKAMEILSVFKESDARKALSNII 387
>gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 332
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 82/295 (27%), Positives = 125/295 (42%), Gaps = 11/295 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVL 66
+ + V +++ + S I + I + GK LR L L + +
Sbjct: 12 IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA AIE H ATL+HDDV+D++ LRR V+ N+ ++ GD+LLS A +
Sbjct: 72 LAAAIETFHLATLIHDDVIDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLATRGAQ 131
Query: 127 QEALEALSLVACTLAE--------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ L GEL QL N +T + YL IK KTA LF A +
Sbjct: 132 LLNIKDNWEDNGPLPYHVVERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAFLFGLACQ 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + +A G+ LG+AFQL DD++DYR ++ GK +D +NG T P+
Sbjct: 192 LGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDYRLRADQSGKPRLQDVQNGIYTAPL 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
IL + + E L + + +A TE Y K
Sbjct: 252 ILG--MAQSQTIKQLVDKHQAVEWKEEELTLLYNHLLNTQAFEATEALIEKYLMK 304
>gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From
Agrobacterium Tumefaciens
Length = 335
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/340 (20%), Positives = 126/340 (37%), Gaps = 58/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--------VEMIPDVVKYLIFSGGKRLRPMLTLA 52
M E ++ K L+ + + + + + +++ + +GGKRLRP L +
Sbjct: 36 MTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIE 95
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ +L + + + A+E +H +L+H +DD LRRG+ + T++L G
Sbjct: 96 SVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAG 155
Query: 111 DFLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYL 162
D LL+ AF ++ + A E G ++ E+ +
Sbjct: 156 DSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGII 215
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ KT L A E ++IAG + RQ L+ +G +G++FQL DD+LD + MG
Sbjct: 216 TLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAATMG 275
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K G+D GK T + R
Sbjct: 276 KATGKDAARGKGT--------------------------------------LVALRGEAW 297
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +A + L P L+ F +R +
Sbjct: 298 AREKLQEQVAEASELLA--PYGEKAAILIAAARFIAERKS 335
>gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
Length = 443
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
P+LT + LA +E IH A+LLHDDV+D S LRRG +A +GN +
Sbjct: 177 PLLT-----AAPTILPTQMRLAHVLEMIHAASLLHDDVIDASPLRRGVASAPEAFGNNLA 231
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
VL G+F+L +A + E + ++ + L EGE+ QL D
Sbjct: 232 VLGGNFVLGRASAALARLGDLEVVGLIASIISNLVEGEILQLKSQNPSDAWNLYLQKTYM 291
Query: 167 SKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+++ A V+ R+ +YG NLGIAFQL DD+LDY +GK
Sbjct: 292 KTASLMAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDYEVSDATLGKPG 351
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D + G T P + A E I + +++ A +++ + + T
Sbjct: 352 GADLQLGLATGPALYAM-----EEYPEMGPLIARKFENEGDVELARDLVKRSSGVERTRE 406
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +Y + A+D+L+ LP+S K++L + + ++R +
Sbjct: 407 LALAYARAARDALQPLPESEAKQALEALTERVVKRTH 443
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 19/52 (36%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ +L+ + S + ++ +Y K LRP+L + G
Sbjct: 57 SEFREGLLELLGSGNPGLTEISRYYFLRPSKYLRPLLVFLFSQATNGLGSQW 108
>gi|76800323|ref|ZP_00782013.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
gi|76584478|gb|EAO61393.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
Length = 111
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ F ++ E+++K ++ +R + + A + +KA + LP SS
Sbjct: 36 ENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQSSA 95
Query: 307 KKSLMEVVDFCLQRL 321
KK L+++ ++ L+R
Sbjct: 96 KKQLLQLTNYLLKRK 110
>gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 349
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 64/297 (21%), Positives = 108/297 (36%), Gaps = 26/297 (8%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTAT 78
I SD E + ++ + +GGKRLRP + +LL A+E +H
Sbjct: 21 AYIGSDYEDLVAALEDFVLNGGKRLRPAFAYWGWRAVATGEPDSEVLLLFSALELLHACA 80
Query: 79 LLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
L+HDDV+DDSA RRG+ + + F +S A + S
Sbjct: 81 LVHDDVIDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSWADDIVF 140
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN----- 188
A ++++ +V YL ++ + A+
Sbjct: 141 RAELSPGAARRVQRVWAEIRTEVLGGQYLDIVAEASGAESIASAMNVDTYKTACYTVSRP 200
Query: 189 ------------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
V+ +G ++G+AFQL DDVL G+ GK G+D R+GK T+
Sbjct: 201 LQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 260
Query: 237 PVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ A + K + K +++ + + ++ AL E R
Sbjct: 261 LLAEAVELADKSDPLAAKLLRGSIGARLTDAEVDRLREVIASVGALAAAERRIAELT 317
>gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 483
Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTK 247
V+ YG NLGIAFQL+DD LD+ + +GK G D R G T P + A+
Sbjct: 354 WVKDVAYGYGRNLGIAFQLIDDALDFLPPDSSLGKPSLGADLRLGLATAPALFAW----- 408
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
I +++ A ++ + L T A + +A+ + LP+S +
Sbjct: 409 ETHPSMGPLILRKFTEPGDVEAARDLVARSDGLQRTIELAREFAGEARRLVEMLPESGAR 468
Query: 308 KSLMEVVDFCLQRL 321
+L+++ ++R+
Sbjct: 469 DALVQLTVKVVERV 482
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ + + + + S + V KY + GK LRP+L L +
Sbjct: 69 LDDPLSAINSEIGNLKSSLWRMLGSSNSALDTVAKYYFQAEGKHLRPLLVLLMSQATNG 127
>gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
Length = 291
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 6 DLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ +V I + + E + + ++Y GKRLRP LTLA +
Sbjct: 23 QFVKNWLAEVRPEIDAYLDACLQIPGSAATERLLEAMRYAALGPGKRLRPALTLAACEAV 82
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
+ + A A+E +HT TL+H
Sbjct: 83 GGDRASALPAAAAVELLHTYTLVH 106
>gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
Length = 289
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 122/319 (38%), Gaps = 50/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + ++ + ++Y + GGKRLR L L +A + + V A +I
Sbjct: 12 ARVQARLDAALADREDLPVVHAMRYAVQ-GGKRLRGFLVLESARLHGIAPEAAVSAAASI 70
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG W T+VL GD L + AF ++ + A
Sbjct: 71 EALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPA 130
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LVA + L + LD+ + + + +
Sbjct: 131 EVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAG 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + + R L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L
Sbjct: 191 AILGQADRVPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLL--- 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + RA + ++A+ +L P
Sbjct: 248 -----------------------------------GLDGAKARARALVEEAEAALA--PY 270
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+L+E F + R +
Sbjct: 271 GPEAGTLIEAARFVISRES 289
>gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
LVS]
gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
OSU18]
gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
FSC200]
gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
257]
gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
holarctica FSC022]
gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica
LVS]
gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
257]
gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
holarctica FSC022]
gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 293
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 33/316 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+KD E + ++ + + + Y FSGGKR+R A L N +
Sbjct: 6 IIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKI 65
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E IHT +L+HDD+ LRRGK + + T++L GD L + AF ++ +
Sbjct: 66 AFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDIN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + + + LD+ E+ I+ +
Sbjct: 126 YSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQI---------LHINKT 176
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + Y ++ Q+ D ++ + + + K T
Sbjct: 177 AKMFRACIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTN--------- 227
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
GK S +++ L D + + L +++
Sbjct: 228 ------------ELGKTSAKDIDANKSTYVSLMGLKDANKYLLDKKNEITQIITKLKNNN 275
Query: 306 W-KKSLMEVVDFCLQR 320
+ SL ++D + R
Sbjct: 276 FSSTSLENLIDLVINR 291
>gi|281181748|dbj|BAI58053.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
Length = 359
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 98/288 (34%), Gaps = 7/288 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ +Y+ GK R L A +L+ ++ A+ +H ++LL DDV
Sbjct: 58 KEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAVGMLHESSLLVDDVQ 117
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A + + + + + +L G+
Sbjct: 118 DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSNISVFADELVSLHRGQG 177
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFS------AALEVSSLIAGVQNSVRQALKSYGM 199
L L E+ + E S +S
Sbjct: 178 MDLFWRDTLTCPTEEEYLEMVGNKTGGLFRLGIKLMQAESSVSSVSGSSSPPLDCVPLVN 237
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ + + K + ED GK + PVI + R +
Sbjct: 238 LVGLIFQIRDDYVNLKSDEYSQHKGMCEDLTEGKFSYPVIHS-IRSRPGDVRLINILKQR 296
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
V+ + A M + T +A+ + K
Sbjct: 297 KTTDVQVKRYAVSYMESTGSFEYTRDVIRILIARARKMASQMDGGDGK 344
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 41/312 (13%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLACAI 71
++N + + + I + ++Y + + G KR P++ +A + ACA+
Sbjct: 31 EINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPTACAL 90
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H+A+L+HDD +DD RRG+ + ++G ++L GD L F ++
Sbjct: 91 EMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHTP--- 147
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
L L + + S +
Sbjct: 148 ----------------SDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQ 191
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ + + L D + G+ +G ++
Sbjct: 192 EKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQV-----------------V 234
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKK 308
+ ++ K+ + K+ + A KAK+ L
Sbjct: 235 DDILEAKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVL 294
Query: 309 SLMEVVDFCLQR 320
L VD+ R
Sbjct: 295 PLYSFVDYAADR 306
>gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018]
Length = 360
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 28/309 (9%)
Query: 20 LKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDN------HVLLACAI 71
I S + + DVVK I S GGKRLR L L + + +ACA+
Sbjct: 28 KNLISSCDKTLKDVVKQAISSSEGGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACAL 87
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E TA L+HDD++D+SALRRG+ +A + L ++ T+S +
Sbjct: 88 EVFQTAALVHDDIIDESALRRGRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITR 147
Query: 132 ALSL-----------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A + Q+ ++ ++ + +S V +
Sbjct: 148 KACTNLRNPQEVLGEFANMQRNVGIGQVLDLSIEMMSLKNPKKLAESSINVFRWKTASYT 207
Query: 181 SLIAGV---------QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
++ +N + G LGIAFQ+ DD++D + GK IG D R
Sbjct: 208 TIAPLALGFLSAGLNKNYAIKLANDIGEPLGIAFQIADDLIDIVSDSAHTGKPIGGDIRE 267
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T+ + A + ++ F N + +++ + I ++ A+ ++ R ++
Sbjct: 268 GKRTVLLADALDLSSSEDRLFLIDAYNSNNRNEDDVNRIINIFNQSGAISKSKKRIHNLW 327
Query: 292 QKAKDSLRC 300
++++ +
Sbjct: 328 VESQEKIDN 336
>gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
Length = 359
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 121/352 (34%), Gaps = 43/352 (12%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPDV-VKYLIFS--GGKRLRPMLTLAT 53
D+E++ I + S + + D + + S GGKRLR +LTL +
Sbjct: 4 STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 63
Query: 54 AL------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-------- 99
E D + LACA+E TA L+HDD++DDS LRRG+ +A
Sbjct: 64 FRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALASGTHS 123
Query: 100 --------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
+ + ++A + + + + + L+
Sbjct: 124 DAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVELN 183
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSYGMNLGIAFQL 207
D E + + + R S G+ LG+AFQL
Sbjct: 184 PLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLGLAFQL 243
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G GK +G D R GK T+ + A + E+ E +
Sbjct: 244 ADDLLDVIGSSLNTGKPVGGDIREGKRTVLLADALSGADEPERAELIGMWEAPSRCEEQV 303
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL--MEVVDFC 317
++A + A+ + R + +K + L +K L F
Sbjct: 304 RRAITLFASTGAIERSHGRIRNLWNASKSIIDALDVPDDRKELLIRACARFV 355
>gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
Length = 365
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/349 (20%), Positives = 119/349 (34%), Gaps = 48/349 (13%)
Query: 8 TLKDMEKVNFLILKRIC-----SDVEMI--------PDVVKYLIFS--GGKRLRPMLTLA 52
D+ + I + + I +V + + S GGKRLR +L L
Sbjct: 3 VSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALH 62
Query: 53 TALMLEYRG-----------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ +G D + LACAIE TA L+HDD++DDS LRRGK AA
Sbjct: 63 AFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAHKAL 122
Query: 102 GNQTSVLVGDFLLSQA-----------FCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
G + L + +S E E+ Q+
Sbjct: 123 GTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQVLD 182
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA---------GVQNSVRQALKSYGMNL 201
++ + + V +++ + G+ L
Sbjct: 183 LAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPL 242
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQL DD+LD G GK +G D R GK T+ + A +R++ +
Sbjct: 243 GQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQRQRRTLIDMFSSQS 302
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKK 308
+++++ + A+ + R + Q ++ LP +
Sbjct: 303 RGDDDVRRCIELFEGTGAIDRSRRRIRALWQGTLHAIGDLRLPPQDERT 351
>gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010]
gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010]
Length = 365
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/349 (20%), Positives = 119/349 (34%), Gaps = 48/349 (13%)
Query: 8 TLKDMEKVNFLILKRIC-----SDVEMI--------PDVVKYLIFS--GGKRLRPMLTLA 52
D+ + I + + I +V + + S GGKRLR +L L
Sbjct: 3 VSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALH 62
Query: 53 TALMLEYRG-----------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ +G D + LACAIE TA L+HDD++DDS LRRGK AA
Sbjct: 63 AFDATDPQGHDDDDAHARGRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAHKAL 122
Query: 102 GNQTSVLVGDFLLSQA-----------FCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
G + L + +S E E+ Q+
Sbjct: 123 GTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQVLD 182
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA---------GVQNSVRQALKSYGMNL 201
++ + + V +++ + G+ L
Sbjct: 183 LAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPL 242
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQL DD+LD G GK +G D R GK T+ + A +R++ +
Sbjct: 243 GQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQRQRRTLIDMFSSQS 302
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKK 308
+++++ + A+ + R + Q ++ LP +
Sbjct: 303 RGDDDVRRCIELFEGTGAIDRSRRRIRALWQGTLHAIGDLRLPPQDERT 351
>gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + + + + SDV + + + L+ +GGKR+RP L + L + L
Sbjct: 257 VKAPLLRFEEALSELVQSDVLFVRLIHQDLVTAGGKRIRPRLVFLASRALGGAPFE-MEL 315
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
A A+E +H+ATLLHDD++DD+ RRGK AA +GN SVL G F
Sbjct: 316 ALAVELLHSATLLHDDLIDDAETRRGKEAAFRKYGNAVSVLSGIFSF 362
>gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 742
Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/310 (20%), Positives = 121/310 (39%), Gaps = 17/310 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
E + V+ +I GGK R ++ ++ L + + E +H +L+ DD+ D+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLIFVSCCNALSRQYFDCSRYIAVAELLHVGSLIIDDIQDN 492
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142
S +RRG + +G T++ G + K+ + V
Sbjct: 493 SVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPPEKASRIYKLYFDVLLAGHA 552
Query: 143 GELRQLSLSKNLDVTEEDYLHV----------IKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
G+ + L + KT A ++ ++ + +
Sbjct: 553 GQGLDIYRLDYLMPKVVETGDTSTLVDALDAIHTYKTGAAVGALCSMACVLCETPTVLSE 612
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
A++ +G+ LG+AFQ+VDD L+ RG ++ K ED ++GK T P+ +A R ++
Sbjct: 613 AMERFGLTLGLAFQIVDDALNIRGFEGDL-KEEAEDIKDGKITYPIAIAMGRLKAADRQA 671
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLM 311
S + ++ +A ++ + A + A Q+ + L L DS K +
Sbjct: 672 LWSILQKPTKEAADIHQAVELITKVDATSECFLIARHQLQEMWNFLDPLLEDSFPKLLMR 731
Query: 312 EVVDFCLQRL 321
F ++R
Sbjct: 732 TFCSFLVERT 741
>gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
Length = 405
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 5/277 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R A L D+ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + KS + + L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESDSGIDCVALVNLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLIN--ILKQKTTDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ A M + T KA + L
Sbjct: 326 VKRYAVNYMESTGSFAYTRKTVVELRDKALLLIDELE 362
>gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium dentium ATCC 27679]
gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium dentium ATCC 27679]
Length = 391
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 121/352 (34%), Gaps = 43/352 (12%)
Query: 9 LKDMEKVNFLI------------LKRICSDVEMIPDV-VKYLIFS--GGKRLRPMLTLAT 53
D+E++ I + S + + D + + S GGKRLR +LTL +
Sbjct: 36 STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 95
Query: 54 AL------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-------- 99
E D + LACA+E TA L+HDD++DDS LRRG+ +A
Sbjct: 96 FRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALASGTHS 155
Query: 100 --------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
+ + ++A + + + + + L+
Sbjct: 156 DAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVELN 215
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----RQALKSYGMNLGIAFQL 207
D E + + + R S G+ LG+AFQL
Sbjct: 216 PLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLGLAFQL 275
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD+LD G GK +G D R GK T+ + A + E+ E +
Sbjct: 276 ADDLLDVIGSSLNTGKPVGGDIREGKRTVLLADALSGADEPERAELIGMWEAPSRCEEQV 335
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL--MEVVDFC 317
++A + A+ + R + +K + L +K L F
Sbjct: 336 RRAITLFASTGAIERSHGRIRNLWNASKSIIDALDVPDDRKELLIRACARFV 387
>gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis AMD]
gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis AMD]
Length = 368
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 33/333 (9%)
Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYR-------GD 62
++ N + + S + + V+K I S GGK LR +LT++
Sbjct: 24 QQFNTGLEDNLSSTCAQTLQQVIKQAIVSSEGGKLLRALLTISAFYAASKETNIQKIHEQ 83
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL------VWGNQTSVLVGDFLLSQ 116
+ +ACA+E TA L+HDD++D+S LRRGK +A + + L
Sbjct: 84 SVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKACNNKHIGTGLGLMLGDLL 143
Query: 117 AFCMVIETKSQEALEALSL--------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
A ++ + + G++ LS+ +
Sbjct: 144 ATESFDIARNCAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEMMQLDNPIQLAESSLNV 203
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI------AFQLVDDVLDYRGEVNEMG 222
++ V+ L G + Q ++Y + I AFQ+ DD+LD + G
Sbjct: 204 FRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQIADDLLDIVSDSKITG 263
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K IG D R GK + + A Q G E+ S +++ K I + A+
Sbjct: 264 KPIGGDIREGKRAVLLADALQYGNDNEREILLKAYTSSTRSEDDVNKIIQIYHTSGAIEK 323
Query: 283 TEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEV 313
++ R + ++ ++ L DS K L E+
Sbjct: 324 SKKRIENLWNDSQQAIESSTLSDS-GKTILHEI 355
>gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
U32]
gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
U32]
Length = 363
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/324 (18%), Positives = 108/324 (33%), Gaps = 36/324 (11%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVVD 86
D ++ + GGKRLRP + + ++E I L+HDD++D
Sbjct: 41 DALRGFVLGGGKRLRPTFAWWGWRGAGGDPAGPDAEGVLQAVASLELIQACALIHDDLID 100
Query: 87 DSALRRGKVAARLVWGNQT-----------------------SVLVGDFLLSQAFCMVIE 123
S RRG + ++ D + + A
Sbjct: 101 SSDSRRGNPTVHIAGAKLHADRGWLGSPATFGLATAVLVGDLALAWADDMFADADLPAET 160
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + + V + A L + + +
Sbjct: 161 LAAARPAWRAMRTEVLAGQYLDVRTQATGDASVEAALKIDR-LKTAAYTVQRPLHLGAAL 219
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
G + L +G +G+AFQL DD+L G+ + GK G+D R GK TL L Q
Sbjct: 220 GGAAPELIATLLEFGGEVGVAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLAALGLQ 279
Query: 244 RGTKREKN----FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ + I D +S E ++ + +++ A+ E R A +L
Sbjct: 280 LAAEKGEQAAATVIADAIGDADLSDEGVETVRMALQQVGAVEAVERRIDELTTAAMAALD 339
Query: 300 --CLPDSSWKKSLMEVVDFCLQRL 321
L + +L +V QR
Sbjct: 340 RAHLAE-PAPAALTGLVVKATQRT 362
>gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1]
Length = 368
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E+I + YL+ GK +R + A L+ D ++ I +H A+LL DD+ D
Sbjct: 32 EEIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDDIQD 91
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRG + ++G ++ ++ A + + A E + L G+
Sbjct: 92 SSKLRRGLPVSHSIFGIAQTINAANYAFFLAQQELPKLGDARAFEIFTEELLHLHRGQGM 151
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ E+ + S ++ + + + + LG+ FQ
Sbjct: 152 DIYWRDASICPTEEEYFTMVSNKTGGL---FRLAVKLMQLASESDKDYVPLVNVLGVIFQ 208
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ + K GED GK + P+I + + + S + ++
Sbjct: 209 IRDDYLNLQSGNYAKNKGFGEDLTEGKFSFPIIHSIR--SNPANIQLSSILKQRTTDIDV 266
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
A + + + +A+ + + D + L
Sbjct: 267 KLFAVGYIESTGSFEHCRRKLVELTAEARAIMENIADGRS-EDLESYA 313
>gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 15/235 (6%)
Query: 18 LILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+ + + D + + ++Y + GGKRLRP+L A A ++ V CA+E IH
Sbjct: 1 ALSQWVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHA 60
Query: 77 ATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD +D+ LRRGK + +G +++L GD L + AF +++ Q +
Sbjct: 61 YSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDA 120
Query: 135 LVACTLA------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L A G+ L+ + A+L ++ L ++
Sbjct: 121 LQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAAC 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
GV QAL YG LG+AFQ+VDD+LD + +GK G+D N KPT
Sbjct: 181 KEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTYV 235
>gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463]
Length = 257
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 3/246 (1%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
+GGK LRP L L A ++ + LA +IE +H ATL+HDD +DDS LRRG ++ +
Sbjct: 3 DNGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDDTIDDSDLRRGNISIQ 62
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVT 157
+G +V GD L + F ++++T ++ + + GEL Q++ NL+ T
Sbjct: 63 AEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSHILNGELGQMAERFNLEQT 122
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
DYL+ IK KTA LF A E + AG AL ++G NLGIAFQ+VDD+LDY G
Sbjct: 123 FTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLLDYTGS 182
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ K ED G +LP++ A + K + ++SV +++ I+ +
Sbjct: 183 AK-LNKPTLEDLATGVYSLPLLFALDQ-PKLKTKLLPILNKKHQMSVSDMQLIQEILVNS 240
Query: 278 RALVDT 283
+
Sbjct: 241 AVIEKC 246
>gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
Length = 289
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 122/319 (38%), Gaps = 50/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + ++ + ++Y + GGKRLR L L +A + + V A +I
Sbjct: 12 ARVQARLDAALADREDLPVVHAMRYAVQ-GGKRLRGFLVLESARLHGIAPEAAVSAAASI 70
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG W T+VL GD L + AF ++ + A
Sbjct: 71 EALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGSA 130
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LVA + L + LD+ + + + +
Sbjct: 131 EVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAG 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + + R L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L
Sbjct: 191 AILGQADRVPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLL--- 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + RA + ++A+ +L P
Sbjct: 248 -----------------------------------GLDGAKARARALVEEAEAALA--PY 270
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+L+E F + R +
Sbjct: 271 GPEAGTLIEAARFVISRES 289
>gi|317150999|ref|XP_001824349.2| hypothetical protein AOR_1_1410094 [Aspergillus oryzae RIB40]
Length = 585
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 9/289 (3%)
Query: 19 ILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
I + + ++I V YL+ GK +R L A L D ++A + +HT
Sbjct: 288 IRQALRVIQSDQIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHT 347
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+LL DD+ D S LRRG A ++G ++ ++ A + E +A E +
Sbjct: 348 ASLLIDDIQDSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEE 407
Query: 137 ACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
L G+ L + TEE+Y+ +I +KT LF A+++ +++ V
Sbjct: 408 LLRLHRGQGMDLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKL----MQLESEVTSDFL 463
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
LGI FQ+ DD + + ++ K ED GK + +I + ++
Sbjct: 464 GLVDLLGIIFQIRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLIIHSINSNLGNQQLLNIL 523
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ SV K A +R + + R S +AK + L ++
Sbjct: 524 RQRSEEESV--KKYAVEYIRSTGSFAYCQDRLASLLHEAKMMVNVLEEN 570
>gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 312
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/334 (23%), Positives = 126/334 (37%), Gaps = 54/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ K ++V + L ++ + ++ DV++Y GGKRLRP L AT ML
Sbjct: 15 DFDQQLSKYQKRVETYLSSALDKLPAYNTVLLDVMRYSTLMGGKRLRPYLVYATGQMLGL 74
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A AIE IH+ +LLHDD+ LRRG++ + +G ++L GD L S A
Sbjct: 75 SLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAGDSLQSLA 134
Query: 118 FCMVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
F ++ + + + + L + G+ ++ E L
Sbjct: 135 FSILADDRMPDVVTEDRLAMLSELARASGATGMCGGQALDMASEYLDISLETLELIHHHK 194
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
A+L +A + L Y ++G+AFQ+ DD+LD GE + GK
Sbjct: 195 TGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILDEIGEARKTGKKPKS 254
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D + GK T P +L +L + +
Sbjct: 255 DQQRGKATYPGLL--------------------------------------SLKGAQKKM 276
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQR 320
+ Q + +L S + L F L+R
Sbjct: 277 AALYQSSLSALTVPEASVYNTLPLQACAHFILER 310
>gi|327300343|ref|XP_003234864.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
gi|326462216|gb|EGD87669.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
Length = 382
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 100/270 (37%), Gaps = 5/270 (1%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y + GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRR
Sbjct: 72 PYSYTVNQPGKDVRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVEDSSHLRR 131
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ QA + + KS EA+ L G+ L
Sbjct: 132 GAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGMDLYWRD 191
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L E+ + ++ + ++SV +G+ FQ+ DD L
Sbjct: 192 TLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESSVPIDCVPLVDLMGLMFQVCDDYL 248
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ K + ED GK + PVI + + + + + E K A
Sbjct: 249 NLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLIN--ILKQKTNDNEVKKYAVK 306
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
M + T A KA + L
Sbjct: 307 YMESTGSFEYTRKVAIELRDKAFLLIDELE 336
>gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
fastidiosa 9a5c]
gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
fastidiosa 9a5c]
Length = 291
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/321 (19%), Positives = 112/321 (34%), Gaps = 51/321 (15%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + + + + + + ++Y + S GKR+RP+L A + + A
Sbjct: 11 QRTDSYLERTLSIPTQAPQRLHAAMRYTVLSRGKRIRPLLVYAAGHLFHVDEPLLDVPAA 70
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF + + S
Sbjct: 71 AVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPSD 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSS 181
+L L T A G + K+ L AA+ + +
Sbjct: 131 TSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L +L ++ LG+AFQ+ DD+LD ++GK G+D K T P
Sbjct: 191 LAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFP---- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ A + A +
Sbjct: 247 ------------------------------ALLSVEGAKCYLQELAERLYTQLH------ 270
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P L + ++R +
Sbjct: 271 PYGERAAPLTALARLAVERAH 291
>gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
Length = 280
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 13/276 (4%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M + + ++ + + ++Y + GKRLRP L A A + A A
Sbjct: 2 MNEFEAFLQRQCRLLKRSEVSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGA 61
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E +HT +L+HDD+ +D+ RRG+ + T++L GD LL+QAF + +
Sbjct: 62 LEMMHTYSLIHDDLPAMDNDDYRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSSDDP 121
Query: 129 ALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + G+++ L + VT E V KT LF+A L + +
Sbjct: 122 VKALKIVKELASAGGAEGMILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLVMGA 181
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK--NIGEDFRNGKPTLPVI 239
++ Q++ + G +G+AFQ+ DD+LD E+GK + ++ ++ TL +
Sbjct: 182 IL-AGQDAAIPQWRRIGALMGLAFQIQDDILDVTKSSKELGKSASDLDNKKSTYVTLLGL 240
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
Q + I + + L M
Sbjct: 241 GQAQDAMTEVYRQTRDAIRQMNLDTQRLIAILDAME 276
>gi|330720271|gb|EGG98631.1| hypothetical protein imdm_2103 [gamma proteobacterium IMCC2047]
Length = 87
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
K E+ +++ + AL T +A ++A L LPD+ ++ +L ++ L R
Sbjct: 26 KNRPEHAATIISLVKNSDALSYTLEKAEFEAEQAIQQLEKLPDNHYRDALRDLAKQALNR 85
Query: 321 L 321
Sbjct: 86 S 86
>gi|302913154|ref|XP_003050856.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731794|gb|EEU45143.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 419
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 108/300 (36%), Gaps = 6/300 (2%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ Y+I GK R L A L+ ++ ++ + +H ++L
Sbjct: 123 RTWTDDKEQVVRGPYDYVISHPGKDFRAQLINAFNAWLDVPQESLDVITRVVGMLHESSL 182
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +++ A + + + + S
Sbjct: 183 LIDDVQDSSELRRGFPVAHNIFGVAQTINSANYIYFIALQELHRLNNPDLITVFSEELVN 242
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L E+ + + + ++SV
Sbjct: 243 LHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLGIKLMAAESSVPTDCVPLVN 299
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ + K + ED GK + PVI + + + + +
Sbjct: 300 LIGLIFQIRDDYMNLSSKEYSHNKGMCEDLTEGKLSFPVIHSIR--SNPTNLQLVNILKQ 357
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCL 318
++ + A M + T ++A+ + + K + +++D +
Sbjct: 358 KTSDIQVKRYAVAYMESTGSFEYTRNVVGILIERARKMTDEIDQGRGYTKGIQKILDKMV 417
>gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. novicida U112]
gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida
FTE]
gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG]
gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548]
gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella novicida U112]
gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549]
gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548]
gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida
FTE]
gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG]
gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida Fx1]
Length = 293
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 33/316 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+KD E + ++ + + + Y FSGGKR+R A L N +
Sbjct: 6 IIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKI 65
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E IHT +L+HDD+ LRRGK + + T++L GD L + AF ++ +
Sbjct: 66 AFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDIN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + + + L I+ + L L++
Sbjct: 126 YSDIDKLKKINKLFAQYCGASGMVGGQQL---------DIEGENKKLKLEELQILHTNKT 176
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + Y ++ Q+ D ++ + + + K T
Sbjct: 177 AKMFRACIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTN--------- 227
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
GK S +++ L D + + L +++
Sbjct: 228 ------------ELGKTSAKDIDANKSTYVSLMGLKDANKYLLDKKNEITQIITKLKNNN 275
Query: 306 W-KKSLMEVVDFCLQR 320
+ SL ++D + R
Sbjct: 276 FSSTSLENLIDLVINR 291
>gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 302
Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/344 (19%), Positives = 129/344 (37%), Gaps = 64/344 (18%)
Query: 1 MKMLEDLTLKDMEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
M D ++ ++ + + + + D ++Y + +GGKR+R L L A
Sbjct: 1 MTDFTAQLATDADQCADMLDMIFNAQSMQA--PRLVDAMRYAVLNGGKRMRAGLVLGAAR 58
Query: 56 ML-------EYRGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTS 106
+ Y + +A A+E +H +L+HDD+ RRGK + + + T+
Sbjct: 59 LAATESDASTYIDSRALRVAAALECLHAYSLIHDDLPAMDDADTRRGKSSCHIAYDEATA 118
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACT--------LAEGELRQLSLSKNLDVTE 158
+L GD L + AF ++ + + + T G ++ +T
Sbjct: 119 ILAGDALQTLAFEILADDATHPDPAVRVALVTTLARASGLAGMAGGQMLDLQAETRTLTL 178
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ + KT L A +L+ +++ A+ +Y LG+AFQ+ DD+LDY G+
Sbjct: 179 AETEQMQMMKTGALIVCAASCGALVGEASSTLVNAIVAYADKLGLAFQIADDLLDYDGDS 238
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ MGK +G+D GK + ++
Sbjct: 239 DGMGKPVGQDAIKGKASFVTLM-------------------------------------- 260
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A S A+ +L P L + F + R +
Sbjct: 261 GVAKAKTEATSLVDNAQMALA--PWQDAAAYLRALAGFAVARRS 302
>gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f]
gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f]
Length = 338
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 17/319 (5%)
Query: 18 LILKRICSDVEMIPDVVKYL---IFS--------GGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + VV Y + + GGK +RP L L +A + +
Sbjct: 19 ALRATVDRLHPRLRHVVAYHRGWVDAAGDPVPGNGGKLVRPALALLSAEAAGAPAEVGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A V+G ++L GD LL A +++E +
Sbjct: 79 AAVAVELVHDFSLLHDDLMDGDTERRHRATAWTVFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
+ A ++ + + Q ++ + + + +S ++
Sbjct: 139 EPGRRAAVILGAGVQDLVRGQAEDLLFESRSDVSVAETLHMEDGKTGALLACSASLGAVL 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG V L YG LG AFQL+DD+L G+ GK + D R+ K ++PV++A +
Sbjct: 199 AGAPGEVVDGLAEYGSRLGTAFQLIDDLLGIWGDPAVTGKPVLNDLRSRKKSVPVVVALE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CL 301
G +G+ S L+ ++ T A + +++LR +
Sbjct: 259 AGGNDADELRAFLTGEGESSEAELQHIAALVERAGGRDWTTAEADRQLKACENALRSISI 318
Query: 302 PDSSWKKSLMEVVDFCLQR 320
P S+ + L+ + F +R
Sbjct: 319 PASAEAE-LLAMARFVTER 336
>gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
ATCC 18188]
Length = 405
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 5/277 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R A L D+ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + KS + + L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESDSGIDCVALVNLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDN--LQLINILKQKTTDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ A M + T KA + L
Sbjct: 326 VKRYAVNYMESTGSFAYTRKTVVQLRDKALLLIDELE 362
>gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
ER-3]
Length = 405
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 5/277 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R A L D+ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + KS + + L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESDSGIDCVALVNLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDN--LQLINILKQKTTDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ A M + T KA + L
Sbjct: 326 VKRYAVNYMESTGSFAYTRKTVVQLRDKALLLIDELE 362
>gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell
isolate TM7a]
Length = 269
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 16/238 (6%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
KML+ + + V +++ + E + ++Y + +GGKR+RP+L +
Sbjct: 4 KMLQKYLKEKKKVVEDNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYMICDLF 63
Query: 58 EYR---GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ D +A A+EFIH +L+HDD+ +D+ RRGK+ + VLVGD
Sbjct: 64 DENKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDV 123
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
LL++AF +V K+ E + +++ + + +D+ E I + +
Sbjct: 124 LLTEAFGVVASAKNLEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDTLKYIH 183
Query: 173 FS-------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
AA+E+ + ++N Q + Y LGIAFQ+ DD+LD G E+GK
Sbjct: 184 AHKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEEIGK 241
>gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204]
gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204]
Length = 278
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 14/273 (5%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ L+ I S + Y + +GGKR+RP L + ACA+E
Sbjct: 2 QIELLLENYIKSLPDSTTKSAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGNPFACALE 61
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--- 127
IHT +L+HDD+ +D+ LRRG + T++L GD LL+ AF + +
Sbjct: 62 MIHTYSLIHDDLPAMDNDDLRRGLPTCHKQFNEATAILAGDGLLTYAFEIAAGSNENSGT 121
Query: 128 --EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + LS +A +QL L + D L I A + +
Sbjct: 122 VLKCISILSKMAGPSGMVYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACTLA 181
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
A K G +LG+AFQ+ DD+LD E GK+ D +N K T IL +R
Sbjct: 182 KHEEDISAWKKIGFSLGLAFQIQDDILDIELTAKEFGKS-NSDQKNHKGTSVSILGIERA 240
Query: 246 TKREKNFWKSTIND-----GKISVENLKKAFII 273
+ + +++ I + G S E L+ I
Sbjct: 241 KEVMNDLYQTAIEEIQTLTGFESAELLEYVCQI 273
>gi|226290540|gb|EEH46024.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb18]
Length = 407
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 109/310 (35%), Gaps = 21/310 (6%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK +R L A L ++ ++ + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A V + ++ A++ L G+
Sbjct: 151 DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALGEVQKLRNPNAIDVYVKELLNLHRGQG 210
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ L E+ + ++ + ++ + +G+ F
Sbjct: 211 MDVFWRDTLTCPTEEEYLDMVGNKTGGL---FRLAIKLMQAESGTEIDCVALANLMGLIF 267
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K + ED GK + P+I + + + + E
Sbjct: 268 QICDDYLNLSNSTYTKNKGLCEDLTEGKFSFPIIHSIRSHPDNLQLIS--ILKQKTRDEE 325
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKA---KDSLRCLPDS-------------SWKKS 309
+ A M + T ++A D+L + +
Sbjct: 326 VKRYAVSYMESTGSFAYTRKTVIQLRERALLLIDALEKAAEHGPGADQTGERSGDPVRTI 385
Query: 310 LMEVVDFCLQ 319
L ++VD +
Sbjct: 386 LNKMVDATVN 395
>gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 289
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 56/328 (17%)
Query: 11 DMEKVNFLILKRIC-------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+++ + +I + + S + + + Y + GGKR+RP L + T + + +
Sbjct: 2 EIDNLKNVIDEYLKKYFINRNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEK 61
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ +A AIE IHT +L+H +DD LRRGK V+G +VL GD LL++A ++
Sbjct: 62 IMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLL 121
Query: 122 IETKSQEALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+++ + AL G LS+ ++++E+ ++ + KT L
Sbjct: 122 MKSSLELGESALRASYEISKAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIR 181
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ ++A V + +AL YG LG+AFQ+ DD+LD G +GK D K
Sbjct: 182 VSIVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGKATHRDKELNKT 241
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ L E +
Sbjct: 242 NFITVY--------------------------------------GLEKCEELCKMLTDEC 263
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L L S L E+ L RLN
Sbjct: 264 IQILDNL--SVDASLLKELTYNLLNRLN 289
>gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(GGPPSASE) (Geranylgeranyl diphosphate synthase)
[Includes: Dimethylallyltranstransferase;
Geranyltranstransferase; Farnesyltranstransferase]
[Frankia alni ACN14a]
Length = 338
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 15/318 (4%)
Query: 18 LILKRICSDVEMIPDVVKYL---IFS--------GGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + VV Y + + GGK +RP L L +A + +
Sbjct: 19 ALRAVVDRLHPRLRHVVAYHRGWVDAAGEPLPGGGGKLVRPALALLSAEAAGAPAEVGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A V+G ++L GD LL A +++E +
Sbjct: 79 AAVAVELVHDFSLLHDDLMDGDTERRHRPTAWTVFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
A A ++ + + Q ++ ++ + + +S ++
Sbjct: 139 DAARRAALILGAGVQDLVRGQAEDLMFESRSDVTVADTLRMEDGKTGALLACSASLGAVL 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + + AL YG LG AFQL+DD+L G+ GK + D R+ K ++PV++A +
Sbjct: 199 AGAGDEMVDALAEYGSRLGTAFQLIDDLLGIWGDPAVTGKPVLSDLRSRKKSVPVVVALE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G + + G+ S L ++ + T A + ++ LR L
Sbjct: 259 AGGAAAEELRAFLVGTGESSEAELAHIAELVEQAGGRDWTTAEADRQLKACENVLRSLSM 318
Query: 304 SSWKKS-LMEVVDFCLQR 320
+ ++ L+ + F +R
Sbjct: 319 PAAVEAELLALARFVTER 336
>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Herbaspirillum seropedicae SmR1]
Length = 311
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
ME+V L + + ++Y GGKR+RP+L A + +
Sbjct: 19 VQSGMEEVLNRFLPSASVVPARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERA 78
Query: 68 ACAIEFIHTATLLHDDVVDDSA 89
A A+E IH +L+HDD+
Sbjct: 79 AAAVEMIHVYSLVHDDMPCMDD 100
Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L +++ A A ++L ++ L E+ D +QR
Sbjct: 270 GLAESQALAGRLQADAHEALAPFG-GKARR-LRELADLIVQRK 310
>gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470]
gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470]
Length = 287
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 52/318 (16%)
Query: 15 VNFLIL-KRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
V+ + + SD + + ++Y + +GGKR+RP L L +L + ++ +ACA+
Sbjct: 8 VDDALECLLMPSDPAHDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYINVACAL 67
Query: 72 EFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +HT +L+HDD+ RRGK+A +G + + GD LL+ AF ++ +
Sbjct: 68 ECVHTYSLIHDDLPGMDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLACENNISF 127
Query: 130 LEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ ++L+ G ++ ++ + + + + KT L A+L+++S
Sbjct: 128 FKRIALIKILTAAAGPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICASLDMASE 187
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
IAG+ + ++A+ +YG ++G+ FQ+ DD+LD+ G EMGK +D K T
Sbjct: 188 IAGLSKNDKEAIHTYGKHIGLLFQITDDLLDFNGVFQEMGKVPLQDISEHKCTY------ 241
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++ ++ + RA A SL
Sbjct: 242 ----------------------------VTLLGKH----QAQQRARKEAVAAVQSLGAF- 268
Query: 303 DSSWKKSLMEVVDFCLQR 320
K L E+ + L R
Sbjct: 269 -GEEFKPLRELPEMILCR 285
>gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 122
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L+ + + L+ + + S+ ++ + + ++Y GGKRLRP+L LA + + E
Sbjct: 4 NELKTWQAQAQAQTELLLARLMPSENQLPQSLHETMRYAALDGGKRLRPLLVLAASELGE 63
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
D AIE IH +L+HDD+ +
Sbjct: 64 AVPDAVEAAMAAIELIHVYSLVHDDMPAMDNDSLRRGRPTCHIRY 108
>gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
Length = 286
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 110/283 (38%), Gaps = 6/283 (2%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+ +Y++ GK +R L A L+ D ++ ++ +H A+LL DD+ D+S LR
Sbjct: 2 EPYQYIVQIPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIEDNSKLR 61
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
RG A ++G ++ +++ +A ++ + ++ + L +G+ +
Sbjct: 62 RGVPVAHQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDILWR 121
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ + E+ ++ +K + + ++ L + FQ+ DD
Sbjct: 122 DSHNCPSEEEYKMMVNKKTGGLFRLAVNLMQL---FSENKRNFTPLLNYLSLFFQIGDDY 178
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
+ + K+ ED GK + P+I A T+ +N + + +
Sbjct: 179 ANLQSTQYSKNKSFCEDLTEGKFSFPIIHAAH--TETGRNTVLNIVRQRTTDDHVKQFCV 236
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEV 313
++ + + T + + ++ L + + L ++
Sbjct: 237 ELLEKVGSFSYTREILRGLSVQVMEEVKNLGGNEELCQLLQQL 279
>gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 304
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILK--RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L+ + + K+N + + S + ++KY + +GGKRLRP+LTLA
Sbjct: 1 MIDLKSFQKEWLPKINQQLENDLSMASPDADLVAMMKYAVLNGGKRLRPLLTLAVVTSFG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + +A AIE++H+ +L+HDD+
Sbjct: 61 ESITPSILKVATAIEWVHSYSLVHDDLPAMDN 92
>gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
Length = 322
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/307 (19%), Positives = 113/307 (36%), Gaps = 14/307 (4%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
D I + Y++ GK R L + + + ++ + +H A+LL DD+
Sbjct: 18 DETAIVEPYDYIVSKPGKSFRSKLINVFNEIYQIPIEKTNQISTLVAILHNASLLIDDIE 77
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVAC 138
D SA RRG + ++G ++ +++ +A ++ + +
Sbjct: 78 DSSATRRGIPTSHTLFGVPLTINAANYMYFKAMEILQTISGDDKILLHDLMVIFNQEMIN 137
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L L ++ + L V + + +L
Sbjct: 138 LHRGQGLDIYWRDNLLQFIPDEATYYNMVMNKTGGLFRLTVRIMELLTDVELPHSLVPLS 197
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LGI +Q+ DD + E K + ED GK + P+I + G + + + +
Sbjct: 198 NLLGIIYQIRDDYQNLSNEQMIANKGLAEDISEGKLSFPIIHGLKYGQSQNETILQDVLR 257
Query: 259 DGKISVENLKKAFIIM-RENRALVDTEYRAYSYGQKAK--DSL--RCLPDSSWKKSLMEV 313
VE K+A + E+ +L T + + AK + + + PD+S K LM V
Sbjct: 258 LRTDDVELKKRALDYLNNESHSLEYTWEKLEELSKLAKSENYIPRKNFPDASNK--LMSV 315
Query: 314 VDFCLQR 320
VD+ R
Sbjct: 316 VDYLSTR 322
>gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis ATCC 14019]
gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis ATCC 14019]
Length = 366
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 28/309 (9%)
Query: 20 LKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDN------HVLLACAI 71
I S + + DVVK I S GGKRLR L L + + +ACA+
Sbjct: 34 KNLISSCDKTLKDVVKQAISSSEGGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACAL 93
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E TA L+HDD++D+SALRRG+ +A + L ++ T+S +
Sbjct: 94 EVFQTAALVHDDIIDESALRRGRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITR 153
Query: 132 ALSL-----------VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
A + Q+ ++ ++ + +S V +
Sbjct: 154 KACTNLRNPQEVLGEFANMQRNVGIGQVLDLSIEMMSLKNPKKLAESSINVFRWKTASYT 213
Query: 181 SLIAGV---------QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
++ +N + G LGIAFQ+ DD++D + GK IG D R
Sbjct: 214 TIAPLALGFLSAGLNKNYAIKLANDIGEPLGIAFQIADDLIDIVSDSAHTGKPIGGDIRE 273
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T+ + A + ++ F N + +++ + I ++ A+ ++ R ++
Sbjct: 274 GKRTVLLADALDLSSSEDRLFLIDAYNSNNRNEDDVNRIINIFNQSGAISKSKKRIHNLW 333
Query: 292 QKAKDSLRC 300
++++ +
Sbjct: 334 VESQEKIDN 342
>gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
Length = 269
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 65/325 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYR 60
K + L ++ + + I + +KY L+ G KRLRP+L L T M
Sbjct: 4 KEIVKLINNSLKD--------LSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNES 55
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A +IE IH +L+HDD +D+ RRGK+ +G +VLVGD LL+ +F
Sbjct: 56 ISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSF 115
Query: 119 CM--VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +A+ A +V + G +R L + ++E++ + + KT L A+
Sbjct: 116 EVLSESIKNEVDAMCANYIVKKSGCFGMIRGQLLDIDSKISEDNIIEIYDKKTCNLLKAS 175
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ V ++ L++Y NLG+AFQ++DD++DY ++
Sbjct: 176 TVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKI---------------- 219
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
K I + + + Y A Y QKA D
Sbjct: 220 -----------------------------EKKTYVTIFGKEKGI----YDANDYSQKAID 246
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + +S + L+E+ + L R
Sbjct: 247 CIKDIHNS---QPLIELTNKLLDRK 268
>gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 330
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/295 (18%), Positives = 114/295 (38%), Gaps = 8/295 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHD 82
SD ++ + +Y+ GK +R L L L+ + + + +H A+LL D
Sbjct: 20 QSDPSLL-EAFRYINSVPGKDVRGKLIDCFQLWLKVESTEILDSIKDIVGDLHNASLLID 78
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ D+S LRRG A ++G + +++ A V S A++ L
Sbjct: 79 DIEDNSKLRRGNPVAHSIFGIPQVINCSNYVYFLALEKVHALNSPTAMQVFVGELLNLHR 138
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ ++ ++ + ++ + L V + + NL
Sbjct: 139 GQGHDIAW-RDSIRCPTEGEYLTMVQDKTGGLFRLAVGLMQCFATTHRDTDFSNLVNNLA 197
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+ FQ+ DD ++ E K+ ED GK + P+I A + S +
Sbjct: 198 MYFQIRDDFINLADEEYMKSKSFCEDLTEGKFSFPIIHAIRS--DESDTRILSILKQRPD 255
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
V+ + A ++++++ +L T + + + + L + L++V+D
Sbjct: 256 DVDVKRYAQVLLKDSGSLDYTREKCSALKRDVVAEIGNLGGNP---PLLKVLDML 307
>gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
Length = 269
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 65/325 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYR 60
K + L ++ + + I + +KY L+ G KRLRP+L L T M
Sbjct: 4 KEIVKLINNSLKD--------LSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNES 55
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A +IE IH +L+HDD +D+ RRGK+ +G +VLVGD LL+ +F
Sbjct: 56 ISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSF 115
Query: 119 CM--VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +A+ A +V + G +R L + ++E++ + + KT L A+
Sbjct: 116 EVLSESIKNEVDAMCANYIVKKSGCFGMIRGQLLDIDSKISEDNIIEIYDKKTCNLLKAS 175
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ V ++ L++Y NLG+AFQ++DD++DY ++ K
Sbjct: 176 TVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKINKKTY----------- 224
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I + + + Y A Y QKA D
Sbjct: 225 ----------------------------------VTIFGKEKGI----YDANDYSQKAID 246
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + +S + L+E+ + L R
Sbjct: 247 CIKDIHNS---QPLIELTNKLLDRK 268
>gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 291
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 65/322 (20%), Positives = 119/322 (36%), Gaps = 53/322 (16%)
Query: 13 EKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + + + +D + +++ GGKR+RP+L A L + L A
Sbjct: 11 ARTEATLDRLLPADTAEPRRLHAAMRHATLGGGKRMRPLLVYAAGTALGADEASLDLPAA 70
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H +L+H +DD +RRG+ + + T++L GD L + AF + + +
Sbjct: 71 AVELVHAYSLVHDDLPAMDDDDMRRGRPTVHVAFDEATAILAGDALQTLAFEALADAAAP 130
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFSAALEVSS 181
L A + + A G + KT L AA+ + +
Sbjct: 131 AELRAGWMQSLARASGAGGMCGGQALDIDATGSQLPLEALQRMHSLKTGALIRAAVRMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
L AG + + L Y LG+AFQ+ DD+LD +GK G+D K T P
Sbjct: 191 LGAGADEARLRQLDRYADALGLAFQVRDDLLDIEASSEALGKTAGKDVAQAKSTYP---- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
++ + + + + +L +
Sbjct: 247 ------------------------------ALL----GVDGARAKLGQLAAEMRAALEEI 272
Query: 302 P-DSSWKKSLMEVVDFCLQRLN 322
D S ++L E+ ++R +
Sbjct: 273 DGDCSLLQALGELA---VRRDH 291
>gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
Length = 347
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/300 (20%), Positives = 115/300 (38%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I +I GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIISRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ + +
Sbjct: 104 EDNSLKRRGASAIHLIYGIDNSINTGNLIYFLPAKLIERSNLKENQKLMIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKDEPKIISKFNQIKNA 283
Query: 262 ISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
K+ F ++ ++++ ++ A Y + K L P + +K L+++V+
Sbjct: 284 KKPTAKKEIFKLTEMINSSKSIKNSTIIALKYLTEFKTELNLYPLTNRYKNLLIDIVEQI 343
>gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
Length = 302
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 80/328 (24%), Positives = 121/328 (36%), Gaps = 48/328 (14%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K L+D + + I + +P + Y SGGK LR L L TA ML
Sbjct: 16 KPLQDALAQASKIAEARIGFALSGLEGDVPAAMLYA-ASGGKALRAFLALETARMLGINP 74
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE IH +L+H +DD LRRG+ W T+VL GD L + AF
Sbjct: 75 VAAAGAAAAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHQKWDQATAVLAGDGLQALAFE 134
Query: 120 ----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFS 174
+++ L A + Q + L I + + +
Sbjct: 135 LLIQAECAPRAKLNLLMSLSNAAGVRGMVGGQAADIAAETAAVPLDLEQIMDLQASKTGA 194
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + + + R+ L YG NLG+AFQ+ DDVLD G+ +GK +G+D GK
Sbjct: 195 LISWSALVGPRMAETEREPLSIYGANLGLAFQIADDVLDATGDAATVGKAVGKDAAAGKA 254
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T ++ L + RA + ++A
Sbjct: 255 TFVSLM--------------------------------------GLDGAKSRAGALVEEA 276
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D+L P +L E F + R +
Sbjct: 277 CDALS--PYGDDADTLKEAAQFVIARTH 302
>gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 335
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/324 (16%), Positives = 112/324 (34%), Gaps = 25/324 (7%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + +A AIEF
Sbjct: 13 EVNKLLPE--NSENKLIS-AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +D+S RR +++ + T+VL GD LL+ AF ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEI 129
Query: 132 ALSLVACTLAEGEL-RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE---VSSLIAGVQ 187
L G + Q + + VI+ + A
Sbjct: 130 IKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKPCDSGA 189
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT---LPVILAFQR 244
+ SY + +L G+ + T
Sbjct: 190 EHEMDSSVSYLHDTLSTLKLQHSYGCMYDAGMTSGQADKIKEIHLMKTAKLFAASCEIGA 249
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENR-----------ALVDTEYRAYSYGQK 293
+ + + + I++ + +A + + + E ++
Sbjct: 250 IIGGATDKQRKALYNYGINLGLIFQAKDDIEDYEQDKTNNLMSVLGKSEVEDYIDGLFKQ 309
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFC 317
D+L L S L ++++
Sbjct: 310 GLDNLSAL--SGDTNYLYDLLNQV 331
>gi|123491638|ref|XP_001325885.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
gi|121908791|gb|EAY13662.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
Length = 334
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 101/304 (33%), Gaps = 20/304 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNH-----VLLACAIEFIHTATLLHDDVV 85
D+++Y GGK LR ++T A + Y D+ L E IH L+ DD++
Sbjct: 36 DMLEYSTK-GGKMLRGIMTAAVYLELTGYSPDSEEAKVGYYLGWVEEIIHAGYLIADDLM 94
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLA 141
D S RRG+ + +L + + + L + +
Sbjct: 95 DQSETRRGQECWYKREEIGDQAVNDGLILQDLAYVLLDKIRNKLNTKYYAKLIEFSRKIG 154
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS----LIAGVQNSVRQALKSY 197
+ + + I + ++ + + + ++ +
Sbjct: 155 TYTTIGQTYDFIAKIPSFQEYNQIVTYKTAFYTVVSPIVFGLIGSQIYDVDDKFEDIEKF 214
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+ LG FQ+ DD +D G+ GK + + + + + K +
Sbjct: 215 MIRLGNYFQVQDDYIDVYGDPKHTGKIGTDIQDAKI-----SWCYCKAYELANDDQKKIL 269
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ E + + + + E + + + + L L KK+L ++++
Sbjct: 270 KEKIGHEEYVNDIKQLYADLKIPQYFEEFSRTESEALRTELANLDPKYPKKALGQILEII 329
Query: 318 LQRL 321
++R
Sbjct: 330 IKRK 333
>gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
Length = 378
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 69/331 (20%), Positives = 125/331 (37%), Gaps = 32/331 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-----LMLEYRGDNHVLLACAIEFIH 75
R+ + + + L+ GKR+RP + A+E +
Sbjct: 48 DRLGPQFAEVVEGLSALVLGSGKRVRPAFAWLGWLGAGGDAAGPDAGAVQRVCAALELLQ 107
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTS-----------------------VLVGDF 112
L+HDD++D S LRRG+ + + + S + D
Sbjct: 108 AGLLVHDDIIDQSDLRRGEPSLHRRFEAEHSREGWSGDAARHGEALAILAGELAFVWADD 167
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
L ++ V + S + + G+ + D +EE VI+ KTA
Sbjct: 168 LAAEGLDAVAGADRTAFRKVWSAMRAEVIGGQCLDVLAQAGDDESEEAATRVIRWKTASY 227
Query: 173 FSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
A E+ ++A S+ +S+G ++G+AFQL DD+L G+ GK G+D R
Sbjct: 228 TVARPLELGGVLACANESLLTFYRSFGDDVGVAFQLHDDLLGVFGDPAVTGKPAGDDVRE 287
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN--LKKAFIIMRENRALVDTEYRAYS 289
GK T+ + LA + + KN ++ + ++ + +A I+ R
Sbjct: 288 GKRTVLMALALRSACEVGKNQEQALRSAFGRGDDDASVAEAVKIIDSLGVRAQVRERIEL 347
Query: 290 YGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319
+A L + ++ K L+E+ L
Sbjct: 348 LRARAAAGLEAVRMPAAAKAGLVELTASLLS 378
>gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus]
gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus]
Length = 205
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L V L +GE QL + + Y KTA L + +L+ ++++G
Sbjct: 14 PICTRLWLWSVLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSG 73
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ + YG NLG+AFQ VDD+LD+ MGK D + G T PV+ A ++
Sbjct: 74 ADEQMVELSFQYGRNLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKF 133
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++++A+ ++ +++ L T + A + +A + +S
Sbjct: 134 PELNPMIL-----RRFREPGDVERAYELVHKSQGLGQTRFLARKHCIEALRLASQIAESP 188
Query: 306 WKKSLMEVVDFCLQRL 321
++K L+ V DF L R+
Sbjct: 189 YQKGLIVVGDFVLNRM 204
>gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 304
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILK--RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L+ + + K+N + + S + ++KY + +GGKRLRP+LTLA
Sbjct: 1 MIELKSFQKEWLPKINQQLENDLSMASPDTDLVAMMKYAVLNGGKRLRPLLTLAVVTSFG 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + +A AIE++H+ +L+HDD V+D+ RRGK + ++G ++LVGD LL+
Sbjct: 61 ESITPSILKVATAIEWVHSYSLVHDDLPVMDNDMFRRGKPSVHALYGEANAILVGDALLT 120
Query: 116 QAF 118
AF
Sbjct: 121 GAF 123
>gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 335
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/324 (16%), Positives = 112/324 (34%), Gaps = 25/324 (7%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + +A AIEF
Sbjct: 13 EVNKLLPE--NSENKLIS-AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +D+S RR +++ + T+VL GD LL+ AF ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEI 129
Query: 132 ALSLVACTLAEGEL-RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE---VSSLIAGVQ 187
L G + Q + + VI+ + A
Sbjct: 130 IKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKPCDSGA 189
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT---LPVILAFQR 244
+ SY + +L G+ + T
Sbjct: 190 EHEMDSSVSYLHDTLSTLKLQHSYDCMYDAGMTSGQADKIKEIHLMKTAKLFAASCEIGA 249
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENR-----------ALVDTEYRAYSYGQK 293
+ + + + I++ + +A + + + E ++
Sbjct: 250 IIGGATDKQRKALYNYGINLGLIFQAKDDIEDYEQDKTNNLMSVLGKSEVEDYIDGLFKQ 309
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFC 317
D+L L S L ++++
Sbjct: 310 GLDNLSAL--SGDTNYLYDLLNQV 331
>gi|329912554|ref|ZP_08275769.1| octaprenyl diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545584|gb|EGF30752.1| octaprenyl diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 79
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ + + AL T A +A ++ LPDS +K SL+++ F + R +
Sbjct: 20 DEQHFDVILAAISSSGALDYTRGEAEKAATRASQAIAGLPDSQYKTSLLDLCTFAVDRNH 79
>gi|47220119|emb|CAF99032.1| unnamed protein product [Tetraodon nigroviridis]
Length = 373
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 98/296 (33%), Gaps = 27/296 (9%)
Query: 44 RLRPMLTLATALMLE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++R ++ L + + LA E IHTA L+H +VD
Sbjct: 84 QMRGLIVLLLSKAAGASRSASGLPPQDMVSGIYPSQRNLAEITELIHTAFLVHRGIVDLK 143
Query: 89 ALR-RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
+ +GN+ +VL GDFLL+ A + + + + +E +S + +G +
Sbjct: 144 EWTVSDGPLKDMQFGNKMAVLSGDFLLANACTGLAQLDNTKVVELISSAIGDVVQGLYYE 203
Query: 148 LSLSKN----LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + L + + + + +A + YG +L +
Sbjct: 204 NCNGSENGVLQAIDMATWEEQAFLSHGALLAKSCQAALELARHDGQSQSLAYQYGKHLSL 263
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+L D+ + ++ ++ ++ + + +
Sbjct: 264 GHKLNSDLQPFVKSSTGEPALFSLFSAP-------VVFHRQIIGEDQWHQQLQQAKTRRN 316
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ K ++ + + + + KA ++++ P S + +L + +
Sbjct: 317 HLDYSKLLAAVKSEKGVSSSVDLCRYHSNKALEAIQAFPSSEARSALENIASAVTK 372
>gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides
T2-87]
Length = 282
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/317 (20%), Positives = 118/317 (37%), Gaps = 50/317 (15%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + + + + + + Y + +GGKR+RP L A + ACAIE
Sbjct: 6 EFETYLKETVLEKLPSRTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPKDGFACACAIE 65
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IHT +L+HDD+ +D+ RRGK + + ++L GD LL++AF +V+ T +
Sbjct: 66 MIHTYSLIHDDLPAMDNDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEVVLRTPCSDTN 125
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAALEVSSLIA 184
+ + A + G + + +E D I V + I
Sbjct: 126 KVKLVEALSSYSGIDGMIYGQELDIQSENDPHATLDTLLKIDEYKTAKLLTLPLVCAAII 185
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
++ + +K G +LG+ FQ+ DD+LD E+GK+ +
Sbjct: 186 ANKHEDIEIMKKIGYDLGVQFQIQDDILDVTKTSEELGKSASDQ---------------- 229
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
N A I+ L + + K L L +
Sbjct: 230 -------------------ENNKTTAVTIL----GLNKAKEMVKELQEDLKKCLMSLNGN 266
Query: 305 SWKKSLMEVVDFCLQRL 321
+ K L + D+ ++R
Sbjct: 267 TDK--LEAIFDYLVKRT 281
>gi|322710216|gb|EFZ01791.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
23]
Length = 431
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 103/300 (34%), Gaps = 5/300 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ +Y+ GK R L A +L+ ++ A+ +H ++L
Sbjct: 132 RSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAVGMLHESSL 191
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +++ A + + + + + +
Sbjct: 192 LVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSIISVFADELVS 251
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L ED + L+ S
Sbjct: 252 LHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLG--IKLMQAESPSSSLDCVPLVN 309
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ K + ED GK + PVI + + + +
Sbjct: 310 LIGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVIHSIR--ANPANMQLINILKQ 367
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCL 318
V+ + A M + T +A+ + K + + +++D +
Sbjct: 368 KTTDVQVKRYAVSYMESTGSFEYTRDVIRILIARARKMASQMDGGDGKAEGIQKILDRMV 427
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 289
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 53/326 (16%)
Query: 9 LKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
K++E L+ + + + + Y + +GGKR+RP+L LA A + ++ +
Sbjct: 3 QKELEDYARLVDSYLAQFPWPTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDIL 62
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
CA+E IHT +L+HDD+ +D+ RRG++A V+G ++L GD LL+ AF ++ +
Sbjct: 63 PAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELIAQ 122
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVLFSA 175
S + +A+ + + + + + V + KT +
Sbjct: 123 PMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVV 182
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++AG +AL SY +G+AFQ+ DD+LD + +GK + D R K T
Sbjct: 183 AARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKST 242
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P ++ L + +A
Sbjct: 243 YPSLM--------------------------------------GLAGAKLELKIKTDEAH 264
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L L L E+ D+ QR
Sbjct: 265 AALAVL--GERAGFLHELADYIAQRK 288
>gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
Length = 287
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 50/328 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
++ + E + + + + + + ++Y GGKR+R L + +A +
Sbjct: 1 MQARLAAEAEVIQTHLTRVLAPFGTGPVAEGMRYATQ-GGKRIRGFLLMESARLHAVPET 59
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A AIE +H +L+HDD+ +D+ LRRG+ + W T++LVGD L S AF +
Sbjct: 60 SALWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHVKWDEATAILVGDALQSLAFEL 119
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVLFS 174
V A L + + L + LD+ E + + +
Sbjct: 120 VAHPDCGPAAVRADLTLTLARAAGGQGMVLGQALDIAAETATTPLSLDEITTLQAGKTGA 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
L ++ A + + L +Y LG+AFQ+ DDV+D G+ GK +G+D GK
Sbjct: 180 LILWSATAGARMAMADSAPLSTYARALGLAFQIQDDVIDVTGDAAAAGKAVGKDAAAGKA 239
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T +L L RA S +A
Sbjct: 240 TFVSLL--------------------------------------GLEGARTRATSLVDEA 261
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
D+L C + +L ++ F + R +
Sbjct: 262 CDALSCY--GARAGALRDLARFVISRQS 287
>gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276]
gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii
WM276]
Length = 483
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 22/285 (7%)
Query: 54 ALMLEYRGDNHV-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L+ G + LA E IH A+LLHDDV+D S+LRRG +A +GN+ S+L
Sbjct: 203 GLLGGENGQPVILPTQRRLASITEMIHVASLLHDDVIDASSLRRGTPSAPSTFGNKLSIL 262
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
GDFLL +A + S+E +E L+ V L EGE+ QL + + +
Sbjct: 263 SGDFLLGRASVALARLGSREVVELLATVIANLVEGEVMQLRATSEPEKAPTTKGFEDYMR 322
Query: 169 TAVLFSAALEV-----------SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
L +A+L + V+ YG NLGIAFQL+DD LD+
Sbjct: 323 KTYLKTASLMAKSARAAVVLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDALDFLPP 382
Query: 218 VNEMGKNI-GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+GK G D R G T P + A+ + I +++ A ++
Sbjct: 383 DPSLGKPSLGADLRLGLATAPALFAW-----ETQPSMGPLILRKFTEPGDVEAARDLVAR 437
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ L T A + +A+ + LP+S + +L+++ ++R+
Sbjct: 438 SDGLQRTVELAREFAGEARRLVEMLPESGARDALVQLTVKVVERV 482
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ ++ + + + + S + V KY + GK LRP+L L +
Sbjct: 69 LDDPLSAINSEIGNLKSSLWRMLGSSNSTLDTVAKYYFQAEGKHLRPLLVLLMSQATNG 127
>gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
Length = 297
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 11 DMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+++ + L + + + + ++Y + +GGKRLRP++ LA +
Sbjct: 5 ELDTLRQLFERSLDQQTRYHLTPPRLIEAMRYSLKNGGKRLRPVMLLAVLAIQSEDLVKC 64
Query: 65 -VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM- 120
+ A A+E+IHT +L+HDD+ +D+ LRRG+ +G ++L GD LL+ AF
Sbjct: 65 GLKTAIALEYIHTYSLIHDDLPAMDNDDLRRGQATNHKRFGEGLAILAGDALLTDAFQFL 124
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
TK + ++ V + + KT LF
Sbjct: 125 VSDDLLDDRTKLALIDQLSQASGSWGMVAGQVGDIEAEQTPVDYQGLKQIHDQKTGALFR 184
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
ALE ++I G S QAL+ +G + G+A+Q+ +D++D G GK D K
Sbjct: 185 FALEAGAIIGGADASTCQALRQFGRHFGLAYQIHNDLMDVLGSQEVTGKVTQADQALTKS 244
Query: 235 TLP 237
T P
Sbjct: 245 TYP 247
>gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
9941]
Length = 304
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 4/306 (1%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + + + + + SGGKRLRP+L L +A + + + A A E +
Sbjct: 1 MEARLREVGGAAPGGLARPALEALTSGGKRLRPLLLLLSAGIGAPVWEEALRAAAATEVL 60
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTATL+HDD+VD + RRG +G + +V GD+L ++AF + + +
Sbjct: 61 HTATLIHDDIVDKAKSRRGAPTTVARYGREVAVATGDYLFAEAFAALSSIGDPRVIREFA 120
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ LA GEL Q S V EDYL IK KTA LF AA + G+ AL
Sbjct: 121 EASRGLAAGELEQFRASG-GPVDVEDYLEHIKLKTAGLFRAACVAGGTLGGLSLPQIDAL 179
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+YG LG+AFQ+ DDV+D G+ MGK IG D G TLP+I A + G +
Sbjct: 180 ATYGQALGLAFQMSDDVMDLVGKPGIMGKGIGTDLAEGTVTLPIIFALREGDAE---TIR 236
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + E L+ + + A+ TE A A L LP + L +
Sbjct: 237 RVLATPRPDPELLEAGIEAVLDTDAVARTEAWAREEIGTALRGLEALPACPERAFLEVIA 296
Query: 315 DFCLQR 320
+ R
Sbjct: 297 AEVVGR 302
>gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 339
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 34/297 (11%)
Query: 10 KDMEKVN--FLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
D+ + L+ + + + +V+Y + GK LRPM+TL A + +
Sbjct: 14 DDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRD 73
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A E++H ATL+HDD++D LRRG+ A + + +++ GD L+ AF ++E
Sbjct: 74 VLAAALGTEYLHVATLVHDDIIDADTLRRGRPAVPVAYSIPGAIVAGDHLIFHAFQAMVE 133
Query: 124 TKSQEALEALSLVA-------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ ++ L G+ + L +LD Y +I+ KT LF A
Sbjct: 134 SGRAVPAASVVSAVTALAEAGQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAV 193
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +L+ G V AL YG ++G AFQ+ DD+L Y + GK D NG+PTL
Sbjct: 194 CHIGALLGGADPLVASALARYGEHVGTAFQIRDDLLSYLSTPEQTGKPATSDLNNGRPTL 253
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA----LVDTEYRAYS 289
P+ + IS + ++ A +
Sbjct: 254 PL-----------------LLAYDAISDAARVELLAVLHRRGAGPGDVEWVTALLRE 293
>gi|322699696|gb|EFY91456.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
Length = 429
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 104/294 (35%), Gaps = 6/294 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ +Y+ GK R L A +L ++ A+ +H ++LL DDV
Sbjct: 137 KEKVVRAPFEYVASHPGKDFRSQLINAFNALLRVPPGRLEIITRAVGMLHESSLLVDDVQ 196
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++G ++ +++ A + + + ++ + L G+
Sbjct: 197 DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSSISVFADELVNLHRGQG 256
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + + + +++ +G+ F
Sbjct: 257 MDLFWRDTLTCPTEDDYLEMVGNKTGGL---FRLGIKLMQAESASDLDCVPLVNLIGLIF 313
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD ++ K + ED GK + PVI + + + + V+
Sbjct: 314 QIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVIHSVRA--DPANMQLINILKQKTTDVQ 371
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCL 318
+ A M + T +A+ + K + + +++D +
Sbjct: 372 VKRYAVSYMESTGSFEYTRDVIRILIARARKMASQMDGGDGKAEGIRKILDRMV 425
>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
Length = 297
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 81/330 (24%), Positives = 129/330 (39%), Gaps = 53/330 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ V +++ ++ + + Y + +GGKRLRP+L AT E +
Sbjct: 8 AFLKESKAFVEEQLVRYANQLQCPNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKEREL 67
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ ACA+E IHT +L+H +DD LRRGK V+G +VL GD LL+ AF V
Sbjct: 68 GIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAV 127
Query: 122 IETKSQEALEALSLVAC---------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
Q+ L ++ + E ++ K KT L
Sbjct: 128 TAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTGRL 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A+ +++AG + L ++ +G+AFQ+ DD+LD G E+GK IG D N
Sbjct: 188 LEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNE 247
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T + + +A I+ E
Sbjct: 248 KSTYTTLFT-------------------------IDEAKCILEETIG------------- 269
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
KAKD++ L + L+ + D +R N
Sbjct: 270 KAKDAIASLQLQD--EHLLSICDLIAKRNN 297
>gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 303
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 12 MEKVNFL----------ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+++V L + + S + + + V+Y + + GKR RPM+TL A
Sbjct: 14 LQRVEALRAGVDRRLADLAPAVGSAPDRLVEAVRYCLLAPGKRFRPMVTLLAAAECGAPE 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACA E IH A+L+ DD+ LRRG + T++L G LL+QA+
Sbjct: 74 GSALDAACAFEMIHAASLILDDLPAMDDAGLRRGLPTIHRAFDEATAILAGVGLLNQAY 132
>gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB]
gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB]
Length = 299
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 120/324 (37%), Gaps = 54/324 (16%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN + + I + + + Y GGKRLRP L AT ML + A
Sbjct: 12 QQVNAALTRFIEPLPFQSSPLVNAMHYGALLGGKRLRPFLVYATGEMLHADPASLDAPAA 71
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IH +L+HDD+ LRRG+ + +G T++L GD L + AF ++ +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMP 131
Query: 128 EALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
L+ + G+ L+ ++ A++ SA
Sbjct: 132 GVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVR 191
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ L Y +G+AFQ+ DD+LD G+ +GK G D GK T P
Sbjct: 192 LGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVVGDTAVIGKRQGADQDLGKSTYP 251
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+L L + +A Q+A D+
Sbjct: 252 SLL--------------------------------------GLENARAKARDLYQEALDA 273
Query: 298 LRCLPDSSW-KKSLMEVVDFCLQR 320
L L S+ +L + F ++R
Sbjct: 274 LELLAAHSYNTTALQALASFIIER 297
>gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans]
Length = 396
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 109/280 (38%), Gaps = 5/280 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ E+I Y++ GK LR + A + L+ ++ ++ + +HTA+LL DDV
Sbjct: 79 NEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE 138
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A V + KS A++ L G+
Sbjct: 139 DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQELLNLHRGQG 198
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + ++ + ++S + + LG+ F
Sbjct: 199 MDLFWRDTLTCPSEDEYLEMVGNKTGGL---FRLAVKLMQAESSTGKDCVALVNVLGLVF 255
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K + ED GK + P+I + + + + + E
Sbjct: 256 QICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIRS--NPGNHQLINILRQRTKDEE 313
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ A M + T+ +A + + +S
Sbjct: 314 VKRYALQYMESTGSFKHTQDVVRQLRARALQLIEEIENSE 353
>gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus
Faecalis V583
gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus
Faecalis V583
Length = 302
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 11/246 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 9 SLTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 68
Query: 61 GD-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ A
Sbjct: 69 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 128
Query: 118 FCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ ++ + + L + + + +T E+ V + KT
Sbjct: 129 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGA 188
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 189 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEAL 248
Query: 232 GKPTLP 237
K T P
Sbjct: 249 NKSTYP 254
>gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 378
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 24/332 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRG 61
E V + + + + ++ Y +GGK +R L + A G
Sbjct: 45 ELVRPALAETVGRLHPWVGEMAAYSFGWCDVGGTPAEGAGGKGVRQALAVLCAEAAGASG 104
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A A+E +HT +LLHDD++D RR + +G +VL GD L + A +
Sbjct: 105 EAAVAGAVAVELVHTFSLLHDDIMDGDQTRRTRPTVWKAYGTGPAVLAGDALFALAVEAL 164
Query: 122 IETKSQEALEALSLVACTLAEGELRQLS--------LSKNLDVTEEDYLHVIKSKTAVLF 173
A A+ ++ L + Q + V E+Y + + KT L
Sbjct: 165 AAVPGAGAAAAVRRLSVALGDLVRGQADDLLFESRPWTGATAVGPEEYRRMAEHKTGALL 224
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A + + +AG S AL G ++G+AFQ+ DD+L G+ GK + D R K
Sbjct: 225 GCAAALGAALAGAPESTAAALDRAGRHMGVAFQVADDLLGIWGDPAVTGKPVHRDLRQRK 284
Query: 234 PTLPV----ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
T PV + + + ++A ++ + A
Sbjct: 285 KTFPVLAALSARGPGASAAGQLATLLEESPDTPDDATTRRAADLIEQAGGRSAALAEADR 344
Query: 290 YGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQR 320
+ + L LP L ++ F +R
Sbjct: 345 HIAAVERCLDGLPLKPRASAELRTLLGFLARR 376
>gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
denticolens F0305]
gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase
[Parascardovia denticolens DSM 10105]
gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
denticolens F0305]
gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase
[Parascardovia denticolens DSM 10105]
Length = 371
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 76/369 (20%), Positives = 136/369 (36%), Gaps = 59/369 (15%)
Query: 1 MKMLEDLTLKDME-KVNFLILKRI---CSDVEMIPDVVKYLIF---------SGGKRLRP 47
M++ + V+ + + + V + + YL GGKRLR
Sbjct: 3 MEISRKTIDDRLSYLVSQNLREALFEGDFAVPVAHE--DYLALLTDQALSSSRGGKRLRA 60
Query: 48 MLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104
+L T L E D + LACAIE T L+HDD++DDS LRRG +A + +
Sbjct: 61 LLLCRTCQALRLPEEDWDAAIDLACAIEIFQTGALVHDDIIDDSDLRRGAPSAHKAFASH 120
Query: 105 ----------------------------TSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
+ LS + + +
Sbjct: 121 LLKRSSTARQDGLGLGLMLGDLLATESVDLIQEASSRLSVPESLKSVIMTAFLTMHRQVE 180
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS-LIAGVQNSVRQALK 195
+ + + + L + + + A L ++ Q + + +
Sbjct: 181 IGQVLDLSMETVDLHDPASIEGGALATYVWKTASYTTIAPLRIAFLACGLDQETSHEVSQ 240
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G+ LG+AFQL DD++D G GK +G D GK T+ + A + EK +
Sbjct: 241 AVGLPLGVAFQLKDDLIDVTG--LHTGKPVGGDIIEGKRTVLLADALSCANEEEKETLLT 298
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK----DSLRCLPDS------S 305
+ K + N++ A I R+ AL + R S ++A+ +L + +S
Sbjct: 299 LYSARKRNQSNVRTAVEIFRKTGALERNQKRIDSLYRQARSGLEKALDHMQESGLTLDEK 358
Query: 306 WKKSLMEVV 314
K++L+ ++
Sbjct: 359 GKQALLGLL 367
>gi|183233717|ref|XP_001913900.1| bifunctional short chain isoprenyl diphosphate synthase [Entamoeba
histolytica HM-1:IMSS]
gi|169801440|gb|EDS89325.1| bifunctional short chain isoprenyl diphosphate synthase, putative
[Entamoeba histolytica HM-1:IMSS]
Length = 326
Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/330 (16%), Positives = 110/330 (33%), Gaps = 15/330 (4%)
Query: 1 MKMLEDLTLKDMEKV--NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L L + ++++ D+++ + GKRLRP+ L +
Sbjct: 1 MEQLVLLVEEKLKEIFEEERKRSTCHQFQAECIDIMEKFVMGPGKRLRPLSLLLFFIGGG 60
Query: 59 YRGDNHVLLA---CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + CA+E +H +TL HDD++D+ +RR + ++ + + +
Sbjct: 61 GKIEEQKNIIRTACAMELLHDSTLAHDDIMDEDEMRRNAPTIVKTFYDKYIERNKEDVKT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + + + Q ++ E L +
Sbjct: 121 ---EKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGTNIAEMVLELFSVLNYGQILD 177
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++++ N + + + I L +D L +N + +G D + GK T
Sbjct: 178 MSGLNTVEEYNLNIIMKTAIFFKTTASIGLTLAEDDLLDIDPLNGKLRKMGNDIKEGKKT 237
Query: 236 LPVILAFQRG-----TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
V A + G K + E K I+R + +
Sbjct: 238 AVVWTALKEGVLSKEEKEFVEGILKLNEKAFDNQEAFTKFLNILRGKPS-EVVRQEIKGH 296
Query: 291 GQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319
QKA D+L+ L L ++ D L
Sbjct: 297 HQKALDALKQLQLKEDGFSYLKQITDLLLH 326
>gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
Length = 289
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 107/284 (37%), Gaps = 6/284 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + +++ GK+ R + +A L D V + I+ +H +LL DD+ D S
Sbjct: 1 LVIEPYNHIMKIPGKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDIQDSS 60
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG AA ++G Q ++ ++++ A E A E L G+ +
Sbjct: 61 VLRRGVPAAHQLFGVQFTMNTACYVITHALIQTNEVGGAAANEIFCHELLELHRGQGADI 120
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E ++ + L + + + ++ +G+ FQ+
Sbjct: 121 FWRDNSICPTEHEYKLMVVRKTGGLFLML---IRLLQLFSENKRDFSKLAGLMGLFFQIR 177
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K ED GK + PV+ + RE + +VE +
Sbjct: 178 DDYCSLKSKDYTTNKTFCEDLSEGKMSFPVVHSIMVMKDREVLHM---LRKRSTNVEEKR 234
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
++ +N +L T + + + + + + L++
Sbjct: 235 YCVELLNKNGSLRYTADMLKILEGEVRTEIAHHGGNPFMEKLVD 278
>gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
Length = 479
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
K I +++ A ++++ + T A++Y +KA+++L+ LPDS K +
Sbjct: 407 HPELKHLIARNLTGTGDIEAAIQCVQQSSGVERTRLLAHAYAEKARETLQRLPDSDTKLA 466
Query: 310 LMEVVDFCLQRL 321
L + + + R
Sbjct: 467 LEGLTETVITRT 478
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L ++ + +L + S + ++ +Y K+LR +L L A G +
Sbjct: 84 LVSPELNVLRSNLLGLLGSAHPGLAEIAEYYFLHPSKQLRSLLVLLFARATNGLGRD--W 141
Query: 67 LACAIEFIHTAT 78
E A
Sbjct: 142 QLRHWEAGTEAH 153
>gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
Length = 288
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 106/286 (37%), Gaps = 10/286 (3%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+I Y++ GK++R L A L+ + ++ ++ +H A+L + D+S
Sbjct: 9 IILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASL----LQDNS 64
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
+LRRG A ++G +++ +++ +E + A + L G+ ++
Sbjct: 65 SLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQGMEI 124
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
N E + + + + + LG+ FQ+
Sbjct: 125 YWRDNYICPTESDYSRMVKRKTGGLFGLAVGLMQL---FSENKGNFTKLIGTLGLYFQIR 181
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K+ ED GK + P+I A Q+ + + + +E K
Sbjct: 182 DDYANLMLKEYTDNKSFAEDLTEGKFSFPIIHAIQQHPEDPRIMN--IVKKRTTDLEIKK 239
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEV 313
A ++ + + T+ +A+ L + + + L E+
Sbjct: 240 YAVDVLDKLGSFTYTKQVMQKLDAEARKEAEELGGNPYIVQILDEL 285
>gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
Length = 280
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + +++ + + + Y + +GGKRLRP+L L+ M + + + A A+E
Sbjct: 8 AVEQTLDEQLAAVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALE 67
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKS 126
++HT +L+H +DD LRRGK +G ++L GD LL+ AF E +
Sbjct: 68 YVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSRQYREKGA 127
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
G +N E + ++KT L AA+ + L +
Sbjct: 128 ACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTI 187
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P +
Sbjct: 188 PETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGKTADKDVIEHKNTFPELLGLDGAI 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + E ++ +N+ + L + +++
Sbjct: 248 QALQVEIAKAETALNELTVDAAPLAEILAVLKA 280
>gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462]
Length = 176
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
I KTA LF+ A + I + + ++A +G LG+AFQ++DD+LDY + K
Sbjct: 24 ISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQTAKTLNKP 83
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
ED NG TLP+ + + K + N + I+R++ L
Sbjct: 84 ALEDLNNGIVTLPL----IYAYQTVPDQLKPLTKTAEQIAANADEIAAIVRKHG-LPQAH 138
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A++Y +A +L LP S K +L ++ L+R +
Sbjct: 139 QLAFTYTHRAITALDPLPSSPTKVALTKLTQQLLKRTH 176
>gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W]
gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II]
Length = 283
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + +++ + + + Y + +GGKRLRP+L L+ M + + + A A+E
Sbjct: 11 AVEQTLDEQLAAVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALE 70
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKS 126
++HT +L+H +DD LRRGK +G ++L GD LL+ AF E +
Sbjct: 71 YVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSRQYREKGA 130
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
G +N E + ++KT L AA+ + L +
Sbjct: 131 ACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTI 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P +
Sbjct: 191 PETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGKTADKDVIEHKNTFPELLGLDGAI 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + E ++ +N+ + L + +++
Sbjct: 251 QALQVEIAKAETALNELTVDAAPLAEILAVLKA 283
>gi|297571334|ref|YP_003697108.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296931681|gb|ADH92489.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 350
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/347 (19%), Positives = 118/347 (34%), Gaps = 47/347 (13%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL------------IFSGGKRLRPMLTLATALMLEYRG 61
V+ + + S V + + + SGGKR R + + +
Sbjct: 9 AVSSRLTDVL-SVVPPFSETARDSELFQEFIAPAVALSSGGKRTRALCVAGGFEAISRQT 67
Query: 62 DNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS-------------- 106
+ + A A+E + L+HDD++DD+ RRG A ++ Q
Sbjct: 68 QDLPLHAAVAVELYQASALVHDDIIDDAETRRGIPAPHRLFAAQHEQLGFIGEAALFGQH 127
Query: 107 -------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
L+ A + + A + +A A G+ + +
Sbjct: 128 SGVLLGDYLLSCGGEEFAKQDAPDGAFRRAFALFNEMASETAFGQYMDMRAEFTPLSNDA 187
Query: 160 DYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
D + + +AG + L + LG AFQL DD L
Sbjct: 188 DCAVDDAFLVLLHKSARYSIELPVLIGVALAGGDDDAAARLTLFTRPLGEAFQLRDDELG 247
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK G D GK T+ + L Q T+ E+ F + + +S +L + I
Sbjct: 248 IFGDPAVTGKPAGSDISEGKRTVLLALTRQMCTQAERTFIDQRLGNA-VSDTDLAEIQAI 306
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
MR + A E +A++ +P+ + L ++ +R
Sbjct: 307 MRSSGAFERHETFIRDREDRAREH---MPEHA--TILRDLACSLAER 348
>gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
Length = 335
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/307 (18%), Positives = 120/307 (39%), Gaps = 15/307 (4%)
Query: 12 MEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
ME++N +IL++ E++ Y+ GK+ R L LA L G+
Sbjct: 1 MEELN-IILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLA 59
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ ++ +H ++LL + D+S LRRG A ++G +++ ++ L A V +
Sbjct: 60 QIGNIVQMLHNSSLL---IEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 116
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
E + + L G+ ++ + E ++ + ++ +
Sbjct: 117 HPEVRKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGL---FMLAIRLMQ 173
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ +S ++ LG+ FQ+ DD + + + K+ ED GK PVI A +
Sbjct: 174 LFSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEVSVNKSFAEDLTEGKFGFPVIHAVRT- 232
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+++ + +E K ++ + + T S +A+ + L +
Sbjct: 233 -QKQDKQVLRKSSQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVSTLGSNP 291
Query: 306 WKKSLME 312
+ L+
Sbjct: 292 YMDRLLN 298
>gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Gardel]
gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Gardel]
Length = 276
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 64/323 (19%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L K++ + + K +++ +KY +F+ GK +RP L A+A +
Sbjct: 9 MENYSRLFTKELYNI---LPKA--DHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + ++ AIE IH +L+HDD+ RRG++++ + ++L GD LL+ AF
Sbjct: 64 IDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAF 123
Query: 119 C----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + + A Q+ ++ + D + KTA LFS
Sbjct: 124 EVLSTINESPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFS 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA EV ++ G ++ +LK+YG+NLG AFQ+ DD+ D ++++
Sbjct: 184 AACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISKNN------------ 231
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
I+ + DTE S K+
Sbjct: 232 -----------------------------------ILNILSK----EDTENYIRSIVDKS 252
Query: 295 KDSLRCLPDSSWKKSLMEVVDFC 317
+ L S+ L + +F
Sbjct: 253 IEYLAIF--SNKANILNNLAEFI 273
>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 289
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ +N + S +I D Y + GGKR+RP+L T + + + +A
Sbjct: 8 KDINEYLENYFSEKGSFNRIIYDSCSYSLNIGGKRIRPILLSLTYYIYKEDYRKVIPMAA 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD +D+ LRRGK + + +VL GD LL++A ++++ +
Sbjct: 68 AMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDALLNEAMIIMMDYALK 127
Query: 128 EALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
AL G +S+ +++++ ++ KT L AA+
Sbjct: 128 SENNALRAAHEIAVAAGAEGMIGGQVVDIISEGKKISQDELEYMHAKKTGALIRAAIVSG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A + L+ YG LG+ FQ+ DD+LD G+ N +GKNI D + K +
Sbjct: 188 AILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNVLGKNIHADEEHNKTNFISVF 247
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + + ++ L+
Sbjct: 248 --------------------------------------GLDKCKELCETLTKECISILKS 269
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L S L+E+ L R N
Sbjct: 270 L--SVNSDCLVELTYTLLNREN 289
>gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 368
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 74/349 (21%), Positives = 124/349 (35%), Gaps = 40/349 (11%)
Query: 13 EKVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLATALMLEY--R 60
E+VN + + + ++ D ++ + GGKRLRP
Sbjct: 19 ERVNRTLGEFMAERTALLSGISDQLGPVSDALRDFLLDGGKRLRPAFCYWGWRAAGGGPD 78
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--------------- 105
A A+E + + L+HDD++D S RRG A + N
Sbjct: 79 EPGIERAAAALELLQASALVHDDLMDRSDTRRGLPAVHRRFENLHRAGGWRGDREQYGAS 138
Query: 106 -SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+VL+GD LL + + + + L E+ L+ D
Sbjct: 139 AAVLLGDLLLIWCDELFQCSGLPTGAVSSAKPVFDLMRTEVMLGQYLDVLEPVAGDSTDA 198
Query: 165 ----------IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
L+V +L+AG + AL +G+ LG AFQL DD+L
Sbjct: 199 DALDRARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLRDDLLGV 258
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ GK G+D R GK TL V A + + + + + + + + ++
Sbjct: 259 FGDPAVTGKPAGDDLREGKRTLLVAHAMRGLSPADAAHLDTRLGAPDLDAGQIAELRDLI 318
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRL 321
+ A E R + +A +L P D ++ L + D R
Sbjct: 319 TLSGAPSTVEDRIEALLAEALAALAAAPVADGPTREVLRALADAATVRK 367
>gi|114608725|ref|XP_518665.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2 isoform 2 [Pan troglodytes]
Length = 355
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/326 (10%), Positives = 86/326 (26%), Gaps = 44/326 (13%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ-----LRGLVVLLISKA 122
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + + + + + L + N + D L
Sbjct: 123 AG--PSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPL-- 178
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
Q + L L L+L +N V E ++ V +
Sbjct: 179 -------KDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENS 231
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
S I +++ + + + ++ E+ + ++ +
Sbjct: 232 TSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMS- 290
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ + K ++ + + +G KA +
Sbjct: 291 --------------------HKAQEKGRLDYAKLRERIKAGKGVTSAIDLCRYHGNKALE 330
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L P S + +L +V F + R +
Sbjct: 331 ALESFPPSEARSALENIV-FAVTRFS 355
>gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus
fumigatus]
gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163]
Length = 387
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 107/284 (37%), Gaps = 6/284 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ Y+ GK +R L A + L+ R ++ ++ + +HTA+LL DDV D
Sbjct: 75 EKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTASLLVDDVED 134
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G ++ +++ A V + + A++ L G+
Sbjct: 135 NSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGM 194
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
L L E+ + ++ + +++ S +G+ FQ
Sbjct: 195 DLFWRDTLTCPTEEDYLDMVGNKTGGL---FRLAIKLMQAESTTGIDCVSLVNVMGLIFQ 251
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ + K + ED GK + P+I + + + S + E
Sbjct: 252 ICDDYLNLSNKTYTQNKGLCEDLTEGKFSFPIIHSIRS--NPRNHQLISILKQRTKDEEV 309
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKS 309
A M + T + KA + + K++
Sbjct: 310 KLYAISYMESTGSFAYTRKVVREFRDKALSLIDEIDAQCDGKQA 353
>gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum]
Length = 289
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 120/330 (36%), Gaps = 51/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M + E++ + + + + + + ++Y + SGGKRLR L L +A + +
Sbjct: 1 MFQSSLKSAAERIETRLTEALAGAADQPVTQAMRYAV-SGGKRLRGFLVLESAALYDIAP 59
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ V A A+E +H +L+H +DD LRRG+ + W + T++L GD L + AF
Sbjct: 60 EAAVDAAAAVEALHAYSLVHDDMPCMDDDDLRRGQPTVHVKWDDGTALLTGDALQTLAFE 119
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAVL 172
++ + +LA + + + + +
Sbjct: 120 LLSAPACHPDPAVRIDLVASLARASGIDGMVLGQAQDIAAETAGRSLTLDEITELQANKT 179
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + A + + L +Y LG+AFQ+ DD+LD G+ + GK + +D G
Sbjct: 180 GALIRWSAEAGARLARADIAPLTAYSTALGLAFQIADDILDVEGDAAKTGKRVHKDAEAG 239
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T +L L RA + +
Sbjct: 240 KATFVSLL--------------------------------------GLDGARARALALVE 261
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A+ +L L F + R +
Sbjct: 262 EAEAALDPF--GGRADPLKAAARFVISRES 289
>gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334]
gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 283
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + +++ + + + Y + +GGKRLRP+L L+ M + + + A A+E
Sbjct: 11 AVEQTLDEQLAAVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALE 70
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
++HT +L+H +DD LRRGK +G ++L GD LL+ AF ++ ++
Sbjct: 71 YVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSREYPEKGA 130
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY----LHVIKSKTAVLFSAALEVSSLIAGV 186
+ ++A + + E+ + + ++KT L AA+ + L +
Sbjct: 131 ACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTI 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P +
Sbjct: 191 PETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGKTADKDVIEHKNTFPELLGLDGAI 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + E ++ +N+ + L + +++
Sbjct: 251 QALQVEIAKAETALNELTVDAAPLAEILAVLKA 283
>gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 359
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 73/357 (20%), Positives = 128/357 (35%), Gaps = 37/357 (10%)
Query: 1 MKMLEDL------TLKDMEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTL 51
M+ + +L +++ +++ + + V +L + GGKR+RP
Sbjct: 1 MQNIPELADIPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAW 60
Query: 52 ATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL--------- 99
A L + A ++EFI L+HDD++D S RRG
Sbjct: 61 AGYLAAGRGEEDPAAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRES 120
Query: 100 -------VWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELR 146
+G ++LVGD L A M ++ + + + L
Sbjct: 121 EYLGDPEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRARSPWRGMRTEVIGGQLLD 180
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + E A L + + IAG + A + YG ++GIA+Q
Sbjct: 181 ISLEAAGSESVELANSVNRYKTAAYTIERPLHLGAAIAGASEELIAAFRGYGHDIGIAYQ 240
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISV 264
L DD L G+ GK G+D R GK T + LA R + + +
Sbjct: 241 LRDDQLGVFGDPAVTGKPAGDDLREGKRTELLALALHRADESDPQAAATLRKLIGRTSDP 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
+ L + I+ ++ A + E R + Q L D + ++L ++ R
Sbjct: 301 QELSRLAQIIADSGAPEEIERRIDALTQSGLQHLHAAQVDPAVTETLEQLAIKATAR 357
>gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica
HM-1:IMSS]
gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 349
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/350 (18%), Positives = 123/350 (35%), Gaps = 32/350 (9%)
Query: 1 MKMLEDLTLKDMEKV--NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L L + ++++ D+++ + GKRLRP+ L +
Sbjct: 1 MEQLVLLVEEKLKEIFEEERKRSTCHQFQAECIDIMEKFVMGPGKRLRPLSLLLFFIGGG 60
Query: 59 YRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + N + ACA+E +H +TL HDD++D+ +RR + ++ + + +
Sbjct: 61 GKIEEQKNIIRTACAMELLHDSTLAHDDIMDEDEMRRNAPTIVKTFYDKYIERNKEDVKT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT------------------ 157
+ F + + + A+ + + L N+
Sbjct: 121 EKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGTNIAEMVLELFSVLNYGQILDMSG 180
Query: 158 ---EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
E+Y I KTA+ F + +AG + K +G + GIAFQ+ DD+LD
Sbjct: 181 LNTVEEYNLNIIMKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRDDLLDI 240
Query: 215 RGEVNEMGKNIGEDFRNGK----PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
++ K + K T + K + E K
Sbjct: 241 DPLNGKLRKMGSDIKEGKKTAVVWTALKEGVLSKEEKEFVEGILKLNEKAFDNQEAFTKF 300
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319
I+R + + QKA D+L+ L L ++ D L
Sbjct: 301 LNILRGKPS-EVVRQEIKEHHQKALDALKQLQLKEDGFSYLKQITDLLLH 349
>gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 361
Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 68/344 (19%), Positives = 134/344 (38%), Gaps = 37/344 (10%)
Query: 14 KVNFLILKRICSDV------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGD 62
+++ + + + E++ ++ + + GKR+RP+ L D
Sbjct: 20 RLDAALEEFFAARPDAGLAPELVGEISELSVL--GKRVRPIFAWCGWLAAGGAETGPESD 77
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRR----------------GKVAARLVWGNQTS 106
V A+E + L+HDDV+D S RR +G+ +
Sbjct: 78 AVVRALVALELLQVCALVHDDVMDRSTTRRGRAAAHVAFAARHRRLRWSGDPKHYGDCAA 137
Query: 107 VLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
VLVGD L+ + ++ S+ + ++ +A L L+ ++ + E+
Sbjct: 138 VLVGDLALAWSDDAIVTAGLEPAALSRAWVAWQAMRVEMMAGQHLDLLAGARREESLEQA 197
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
A L + + +AG + +AL+S+G ++G+AFQL DD+L G+
Sbjct: 198 LRVAALKTAAYTVERPLHLGAAMAGAGPELVEALRSFGRDIGVAFQLRDDLLGVFGDPGV 257
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRA 279
GK +G+D R GK T + +A + + D + N + ++ E A
Sbjct: 258 TGKPVGDDLREGKRTPLMSIALGLARSAGDDAAAELLRDCLERRPVNYRAVEAVLVETGA 317
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
+ E + + A +L P + +L+ + R +
Sbjct: 318 VATVESKITALAASAVRALDDAPVRPEARSALLRMAGRATDRRS 361
>gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 357
Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 102/281 (36%), Gaps = 19/281 (6%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
++ L GGKR+R +L A ++ D A +IE + T L+HDD++DDSA RR
Sbjct: 47 LRDLSLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDLIDDSATRR 106
Query: 93 GKVAARLVWGNQTSVL-----------------VGDFLLSQAFCMVIETKSQEALEALSL 135
G + + + +L A V ++ ++ +
Sbjct: 107 GGPTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLDAELPVAVRQAMVEVQTRAA 166
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL- 194
+ + + + + E + A + + L AG + +
Sbjct: 167 TDTFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHEDEL 226
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ Y +GI Q+ DD LD G+ GK G D R G+ T V+ + E++F
Sbjct: 227 RRYARLVGICGQMRDDWLDLFGDEGTTGKPTGGDIREGRHTYTVVRLLSAVSGSERDFVD 286
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ D + E + + I Y ++A+
Sbjct: 287 RALGDPACTPETIAEIRAIGERAGVADRMRADMRQYAERAR 327
>gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 394
Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/346 (21%), Positives = 128/346 (36%), Gaps = 55/346 (15%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ ++ GGK LRP L++AT L L + + A +E H A L+HDD+ D+S
Sbjct: 47 LYQLILDYPLRGGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESW 106
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLVACTL 140
RRGK + +G +V VGD +LS + +++ + A
Sbjct: 107 WRRGKPTLHIDYGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVD 166
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGM 199
+ S + + DYL +++ KT+ + ++ AG L+S G
Sbjct: 167 GQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLESLGR 226
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+LG AFQ+ DD+L+ R + E GK IG D GK TL ++ + ++ ++
Sbjct: 227 HLGAAFQITDDLLNLRADPQEYGKEIGGDLWEGKRTLMLLHTLRHAEPGDQQRAVQILSR 286
Query: 260 GKISVE------------------------------------------NLKKAFIIMREN 277
+ S + +++ + +M
Sbjct: 287 RRPSPDAEFDLTELLDRLTAGGQLSVSGRTEIDARLRRHHHSEVKSLNDIRWLYELMHRV 346
Query: 278 RALVDTEY---RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+L R L P S + L +VD+ R
Sbjct: 347 GSLNHARDVAVRQARQAAAVLAGLDWFPRSRHRDMLAALVDYVHGR 392
>gi|297678820|ref|XP_002817259.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Pongo
abelii]
Length = 415
Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 14/261 (5%)
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA E IHTA L+H +V+ + L+ + +GN+ ++L GDFLL+ A + +
Sbjct: 164 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 223
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIKSKTAVLFSAALEVSS 181
+ + +E L+ L +G + S SK +T++ + L + + + +
Sbjct: 224 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 283
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+A V+ YG ++ ++ ++ DV + E + V+
Sbjct: 284 ELAKHDAEVQDMAFQYGKHMAMSHKINSDVQPFIKEKTSDSMTFNLNSA-----PVVLHQ 338
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G G++ + K ++ + + +G KA ++L
Sbjct: 339 EFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKAGKGVTSAIDLCRYHGNKALEALESF 395
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S + +L +V F + R +
Sbjct: 396 PPSEARSALENIV-FAVTRFS 415
>gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
M]
gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
M]
Length = 384
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 100/316 (31%), Gaps = 26/316 (8%)
Query: 32 DVVKYLIF---SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+V ++ S GK LR L + + A ++E +H LL DDV+D S
Sbjct: 68 EVAGDILLRFVSEGKCLRSTFMYLGWLCGAGPNNAALSAAASLELLHAFALLQDDVMDQS 127
Query: 89 ALRRGKVAARLVWGNQTSVLV----------------GDFLLSQAFCM--VIETKSQEAL 130
RRG A + GD L A M + +
Sbjct: 128 PQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVWAEQMLRESGVEDRRLR 187
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ E + QL N V+ + + +
Sbjct: 188 QVWPRYDAMRIELAVGQLCDLSNDIRNLPTLDAVLDVARRKSGNYTVRRPLEMGAAMADC 247
Query: 191 RQAL----KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ YG +G AFQL DD+L G GK G+D R K T V+ A++
Sbjct: 248 DERTLEQLARYGDAVGEAFQLRDDMLGVFGTPAITGKPSGDDLRERKATSVVVAAYEMAD 307
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-S 305
+ ++ ++ + ++ A+ E + + L +
Sbjct: 308 PPTRRQLHELMHRAELDDAAVDHCKRLITATGAVQRIEDMIDRRVDRVRTLLADMTIGQQ 367
Query: 306 WKKSLMEVVDFCLQRL 321
+ +L ++ C+QR
Sbjct: 368 TRAALGDLAAACVQRS 383
>gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
Length = 276
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 64/323 (19%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L K++ + + K +++ +KY +F+ GK +RP L A+A +
Sbjct: 9 MENYSRLFTKELYNI---LPKA--DHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVN 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D + ++ AIE IH +L+HDD+ RRG++++ + ++L GD LL+ AF
Sbjct: 64 IDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAF 123
Query: 119 C----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + + A Q+ ++ + D + KTA LFS
Sbjct: 124 EVLSTINESPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFS 183
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA EV ++ G ++ +LK+YG+NLG AFQ+ DD+ D ++++
Sbjct: 184 AACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISKNN------------ 231
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
I+ + DTE S K+
Sbjct: 232 -----------------------------------ILNILSK----EDTENYIRSIVDKS 252
Query: 295 KDSLRCLPDSSWKKSLMEVVDFC 317
+ L S+ L + +F
Sbjct: 253 IEYLAIF--SNKANILNNLAEFI 273
>gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
Length = 357
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 19/281 (6%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
++ L GGKR+R +L A ++ D A +IE + T L+HDD++DDSA RR
Sbjct: 47 LRDLSLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDLIDDSATRR 106
Query: 93 GKVAARLVWGNQTSVL-----------------VGDFLLSQAFCMVIETKSQEALEALSL 135
G + + + +L +A V ++ ++ +
Sbjct: 107 GGPTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLEAELPVAVRQAMVEVQTRAA 166
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL- 194
+ + + + + E + A + + L AG + +
Sbjct: 167 TDTFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHEDEL 226
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ Y +GI Q+ DD LD G+ GK G D R G+ T V+ + E++F
Sbjct: 227 RRYARLVGICGQMRDDWLDLFGDEGTTGKPTGGDIREGRHTYTVVRLLSAVSGSERDFVD 286
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ D + E + + I Y ++A+
Sbjct: 287 RALGDPACTPETIAEIRAIGERAGVADRMRADMRQYAERAR 327
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 53/326 (16%)
Query: 9 LKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
K++E L+ + + + + Y + +GGKR+RP+L LA A + ++ +
Sbjct: 4 QKELEDYARLVDSYLAQFPWPTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDIL 63
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
CA+E IHT +L+HDD+ +D+ RRG++A V+G ++L GD LL+ AF ++ +
Sbjct: 64 PAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELLAQ 123
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNL--------DVTEEDYLHVIKSKTAVLFSA 175
S + +A+ + + + + + V + KT +
Sbjct: 124 PMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVV 183
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + +++AG +AL SY +G+AFQ+ DD+LD + +GK + D R K T
Sbjct: 184 AARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKST 243
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P ++ L + +A
Sbjct: 244 YPSLM--------------------------------------GLAGAKLELKIKTDEAH 265
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRL 321
+L L L E+ D+ QR
Sbjct: 266 AALAVL--GERAGFLHELADYIAQRK 289
>gi|194376472|dbj|BAG62995.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 14/272 (5%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVWGNQTSVLVGDFLL 114
M+ LA E IH A L+H +V+ + L+ + +GN+ ++L GDFLL
Sbjct: 1 MVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLL 60
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIKSKTA 170
+ A + ++ + +E L+ L +G + S SK +T++ +
Sbjct: 61 ANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHG 120
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + + + +A V+ YG ++ ++ ++ DV + E +
Sbjct: 121 ALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTSDSMTFNLNSA 180
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
V+ G G++ + K ++ + + +
Sbjct: 181 -----PVVLHQEFLGRDLWIKQIGEAQEKGRL---DYAKLRERIKAGKGVTSAIDLCRYH 232
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
G KA ++L P S + +L +V F + R +
Sbjct: 233 GNKALEALESFPPSEARSALENIV-FAVTRFS 263
>gi|195592020|ref|XP_002085734.1| GD14926 [Drosophila simulans]
gi|194197743|gb|EDX11319.1| GD14926 [Drosophila simulans]
Length = 448
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 86 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 139
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 140 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 199
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 200 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 259
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 260 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 319
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 320 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 379
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 380 YSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 439
Query: 312 EVV 314
++
Sbjct: 440 NII 442
>gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
SK46]
gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
SK46]
Length = 370
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 71/359 (19%), Positives = 128/359 (35%), Gaps = 47/359 (13%)
Query: 2 KMLEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
K LE+ D+ V+ + + I S + +GGKR+RP L
Sbjct: 21 KTLENYLKSRGDDVASVDAVYTEAIDSLHS--------FVLNGGKRVRPAFAWQGWLGAG 72
Query: 59 Y---------RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL- 108
+ A+E I L+HDD++DD+ RRG V+ +
Sbjct: 73 GLEGRFSPAEDSPAVMNAVSALELIQACALIHDDIIDDADTRRGAPTIHKVFEAKHEANS 132
Query: 109 ---------------VGDFLLSQAFCMVI----ETKSQEALEALSLVACTLAEGELRQLS 149
+GD L+ A M+ +++ T G
Sbjct: 133 WNGAADRFGISAAILIGDVALTWADDMMHSSGLSSEALTRALVPWRAMRTEVLGGQLLDI 192
Query: 150 LSKNLDVTEEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
++ + + I A L + + IAG + +A +S+G ++G+AFQL
Sbjct: 193 TAEASRDSRVETAEKINLFKTAAYTIERPLHIGAAIAGAPAELVEAYRSFGRDIGVAFQL 252
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVE 265
DD L G+ GK G+D R GK T+ V A + + S
Sbjct: 253 RDDQLGVFGDPEVTGKPAGDDLREGKRTVLVGQALSLYRESAPEKARFIDERLGAVSSAA 312
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQRLN 322
++ + ++ ++ A E +A ++ LP +S +++L+ + R +
Sbjct: 313 DIDELRNLIADSGAADAVEREIDRLTSRAFSTIENADLPATS-RENLIAMGVRATARQH 370
>gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 283
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V + +++ + + + Y + +GGKRLRP+L L+ M + + + A A+E
Sbjct: 11 AVEQTLDEQLAAVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALE 70
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
++HT +L+H +DD LRRGK +G ++L GD LL+ AF ++ ++
Sbjct: 71 YVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSRQYPEKGA 130
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY----LHVIKSKTAVLFSAALEVSSLIAGV 186
+ ++A + + E+ + + ++KT L AA+ + L+ +
Sbjct: 131 ACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLLVTI 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P +
Sbjct: 191 PETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGKTADKDVIEHKNTFPELLGLDGAI 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + E ++ +N+ + L + +++
Sbjct: 251 QALQVEIAKAETALNELTVDAAPLAEILAVLKA 283
>gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
Length = 301
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 73/301 (24%), Positives = 112/301 (37%), Gaps = 48/301 (15%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVD 86
IP+ + Y + GGK LR L L A + + +A AIE +H +L+H +D
Sbjct: 42 PIPEAMMYAV-RGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLPCMD 100
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVACTLAE 142
D LRRGK W T+VL GD L + AF +++ +++ L + V
Sbjct: 101 DDDLRRGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKVVLAHMLAVDAGERG 160
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMNL 201
Q + L I+S A A +E + + ++ YG L
Sbjct: 161 MVGGQAADIAAESAAAALTLGEIESLQAKKTGALVEWACAAGPRIAGADEMPMRQYGRAL 220
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AFQ+ DD+LD G+ +GK +G+D GK T +L
Sbjct: 221 GRAFQIADDILDVTGDAEAVGKAVGKDHAAGKATFVSLL--------------------- 259
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L + RA +A D+L +L F +QR
Sbjct: 260 -----------------GLDGAKSRAVELVDEACDALDVY--REAANTLKAAARFVVQRT 300
Query: 322 N 322
+
Sbjct: 301 H 301
>gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
Length = 297
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 14 KVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACA 70
K+N ++ I D + + + Y + +GGKRLRP+LTLA A + + + +CA
Sbjct: 15 KINQILENDIKPDTDQTTLEAAMIYSVNAGGKRLRPLLTLAVLASLGDPIDQTVLKTSCA 74
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+E +H+ +L+HDD+ +D+ LRRGK + +G + L GD L AF
Sbjct: 75 LELMHSYSLIHDDLPAMDNDDLRRGKPTNHVKFGAGMATLAGDGLQPLAFQW 126
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEY 59
MK +E+V +K SD + + ++Y I +GGKR+RP+L AT A +
Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTSD-RRLFESMQYSIQAGGKRIRPLLLAATVAAFHKP 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ A
Sbjct: 60 INTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAA 119
Query: 118 FCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F +V + + + L L +N + E+ + + + KT
Sbjct: 120 FQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSIHERKTGE 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++A V L + ++G+AFQ+ DD+LD E+GK + D
Sbjct: 180 LIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDEL 239
Query: 232 GKPTLP 237
K T P
Sbjct: 240 AKSTYP 245
>gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
Length = 282
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ L D + + K + +D + Y GGKR+R +L L +
Sbjct: 1 MEDFIKLIHNDKSIIETRLNK-VYADNNEFEKMCAYSFSVGGKRIRAILLLEAFKICRDI 59
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
D + + A+E IH +L+HDD+ + +
Sbjct: 60 SDIAIDFSVALELIHNYSLVHDDLPEMDDDKFR 92
>gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 395
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 76/346 (21%), Positives = 128/346 (36%), Gaps = 55/346 (15%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ ++ GGK LRP L++AT L L + + A +E H A L+HDD+ D+S
Sbjct: 48 LYQLILDYPLRGGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESW 107
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLVACTL 140
RRGK + G +V VGD +LS + +++ + A
Sbjct: 108 WRRGKPTLHIDHGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVD 167
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL-KSYGM 199
+ S + + DYL +++ KT+ + +A R A +S G
Sbjct: 168 GQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLESLGR 227
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+LG AFQ+ DD+L+ R + E GK IG D GK TL ++ + ++ ++
Sbjct: 228 HLGAAFQITDDLLNLRADPQEYGKEIGGDLWEGKRTLMLLHTLRHAEPGDQQRAVQILSR 287
Query: 260 GKISVE---NLKKAFIIMRENR-----ALVDTEYRAYSYG-------------------- 291
+ S + +L + + + E R +
Sbjct: 288 RRPSPDAEFDLTELLDRLTAGGQLSVSGRTEIEARLRRHHHSEVKSLNDIRWLYELMHRV 347
Query: 292 ---QKAKDS--------------LRCLPDSSWKKSLMEVVDFCLQR 320
A+D L P S + L +VD+ R
Sbjct: 348 GSLNHARDVAVRQARQAAAVLAGLDWFPRSRHRDMLAALVDYVHGR 393
>gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT]
gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT]
Length = 289
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 18/274 (6%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+ + + + + +V++Y++ S GKR+RP++ L ++ + A A+E
Sbjct: 11 IEDGLGALVQESQGLHVGEVIEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVEL 70
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
H A+L+HDD++D RRG +A +G + S+L GD+L+S + ++
Sbjct: 71 AHAASLIHDDILDCGVERRGAPSAFRRFGMEASLLAGDYLISMSIGLISSYGEPAIRLFS 130
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + + ++Y I KTA LF+A+ + +IAG +
Sbjct: 131 KACMDMAEGEI-----IDLSRIASPQEYYQCITKKTASLFAASARLGCMIAGADREDQIL 185
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ YG+ LG+A+Q+VDD+ +G + G+ TLP I A + G +
Sbjct: 186 YERYGLELGLAYQIVDDL------EELIGIDQGKRSTKKSMTLPRIYALRSGPEETLRMC 239
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
+ + + A +R + + R
Sbjct: 240 VDAVREHTGN------AHTSLRSAGGDPEMKERL 267
>gi|195348425|ref|XP_002040749.1| GM22336 [Drosophila sechellia]
gi|194122259|gb|EDW44302.1| GM22336 [Drosophila sechellia]
Length = 448
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 86 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 139
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 140 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 199
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 200 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 259
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 260 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 319
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 320 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 379
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 380 YSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 439
Query: 312 EVV 314
++
Sbjct: 440 NII 442
>gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 299
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 14/243 (5%)
Query: 8 TLKDMEKVNFLILKRICS--------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ V + R+ + E + + ++Y + GGKRLRP L LA
Sbjct: 13 IQSYLRSVTERLEPRLAALADERRGQGPERLVEAIRYALLGGGKRLRPALVLAACEAHGG 72
Query: 60 RGDN---HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + A A+E +HT +L+H +DD LRRG+ + T+VLVGD L
Sbjct: 73 DASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAVLVGDALQ 132
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S AF ++ A L+A Q + + V++ +
Sbjct: 133 SLAFRHLLAAPQPTAAALARLLAENAYLMVEGQARDIQGEHARLAEA-EVLELMRTKTGA 191
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ A + +A+ G+ LG+AFQ+ DD+LD + +GK G+D GK
Sbjct: 192 LLASAVAGGAACAGAAVEAVYPIGLKLGLAFQIADDLLDLTADTQTLGKRAGKDADAGKS 251
Query: 235 TLP 237
TLP
Sbjct: 252 TLP 254
>gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 374
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/303 (21%), Positives = 106/303 (34%), Gaps = 25/303 (8%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LR L D + A + + +H LL DDV+DDS LRRG+ AA + +
Sbjct: 71 GKCLRSTFAYLGWLAGAAPDDAALRAAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRF 130
Query: 102 GNQT----------------SVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEG 143
+VL+GD L A M+ E+ + A E
Sbjct: 131 AQWHRDNGLNGSAERFGASAAVLLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTEL 190
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL----KSYGM 199
+ Q + N V+ + + I G A YG
Sbjct: 191 AVGQFADLVNDAGGRPTLEDVLDVARRKSGNYTVRRPLEIGGALAGCPDATLGLLGRYGA 250
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G AFQL DD+L G GK G D K T V+ A + +N ++
Sbjct: 251 AVGEAFQLRDDLLGIFGAPTVTGKPAGGDLSEHKATSVVVAAHRLAEPSVRNQLTELMSR 310
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFC 317
+ ++ + ++ A+ E A + + L D+ + +L+ + C
Sbjct: 311 RDLDAGDITRWQHLIAATGAVQWIEQLIDRRLSHALERIHTSPLDDT-VRTALVNMAAVC 369
Query: 318 LQR 320
+R
Sbjct: 370 TRR 372
>gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase
[Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus
nidulans FGSC A4]
Length = 396
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 109/280 (38%), Gaps = 5/280 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ E+I Y++ GK LR + A + L+ ++ ++ + +HTA+LL DDV
Sbjct: 79 NEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE 138
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A V + KS A++ L G+
Sbjct: 139 DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQG 198
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L ED + ++ + ++S + + LG+ F
Sbjct: 199 MDLFWRDTLTCPSEDEYLEMVGNKTGGL---FRLAVKLMQAESSTGKDCVALVNVLGLVF 255
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K + ED GK + P+I + + + + + E
Sbjct: 256 QICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIRS--NPGNHQLINILRQRTKDEE 313
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ A M + T+ +A + + +S
Sbjct: 314 VKRYALQYMESTGSFKHTQDVVRQLRARALQLIEEIENSE 353
>gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
Length = 294
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 121 TILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLERAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW]
gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW]
Length = 289
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 108/312 (34%), Gaps = 50/312 (16%)
Query: 12 MEKVNFLILK-----RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
M ++ + + + + ++Y +F GG RLRP L +A A +
Sbjct: 4 MARIELALESAIKGTEVSGTPPRLAEAMRYSVFPGGHRLRPRLCVAVARACGDDAPELTD 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A +IE +H A+L+HDD+ +RR K + +G +VL GD L+ AF ++
Sbjct: 64 AAAASIELLHCASLVHDDLPCFDDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAFDLLAR 123
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+Q + L+ + ++ E + + A + +
Sbjct: 124 AAAQRPDRLIPLMGVVSRSVGVPSGIIAGQAWECEPEADLSEYHR-AKTGALFAGATMAG 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + + G LG A+Q+ DD+ D + E+GK +G D G+ +
Sbjct: 183 AAAAGADPTPWRFLGERLGEAYQVADDLRDVAADPEEIGKPVGRDAALGRSSA------- 235
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + + R + A DS+ P
Sbjct: 236 --------------------------VREL-----GIAGSLKRLDELAESAIDSI---PA 261
Query: 304 SSWKKSLMEVVD 315
+ L ++
Sbjct: 262 CPGQAELQALIR 273
>gi|21356309|ref|NP_649277.1| CG10585 [Drosophila melanogaster]
gi|7296380|gb|AAF51668.1| CG10585 [Drosophila melanogaster]
gi|15291505|gb|AAK93021.1| GH23839p [Drosophila melanogaster]
gi|220945632|gb|ACL85359.1| CG10585-PA [synthetic construct]
gi|220955430|gb|ACL90258.1| CG10585-PA [synthetic construct]
Length = 448
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 86 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 139
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 140 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 199
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 200 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 259
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 260 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 319
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 320 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 379
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 380 YSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 439
Query: 312 EVV 314
++
Sbjct: 440 NII 442
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
Length = 298
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALML 57
M L + T + + ++ + + + + + ++Y I +GGKR+RP+L AT A
Sbjct: 1 MSALTEFTKEHAPLIEEVMERFVKEHTSDQRLFKSMQYSIQAGGKRIRPLLLAATVAAFH 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+
Sbjct: 61 KPVNTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLT 120
Query: 116 QAFCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
AF +V + + + L L +N ++ E+ + + + KT
Sbjct: 121 AAFQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALSLEELMSIHERKT 180
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A+ ++A V L + ++G+AFQ+ DD+LD E+GK + D
Sbjct: 181 GELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDD 240
Query: 230 RNGKPTLP 237
K T P
Sbjct: 241 ELAKSTYP 248
>gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 374
Score = 62.7 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/303 (21%), Positives = 107/303 (35%), Gaps = 25/303 (8%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LR L D + A + + +H LL DDV+DDS LRRG+ AA + +
Sbjct: 71 GKCLRSTFAYLGWLAGAAPDDAALRAAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRF 130
Query: 102 GNQT----------------SVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEG 143
+VL+GD L A M+ E+ + A E
Sbjct: 131 AQWHRDNGLNGSAERFGASAAVLLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTEL 190
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL----KSYGM 199
+ Q + N V+ + + I G +A YG
Sbjct: 191 AVGQFADLVNDAGGRPTLEDVLDVARRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGA 250
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G AFQL DD+L G GK G D K T V+ A + +N ++
Sbjct: 251 AVGEAFQLRDDLLGIFGAPTVTGKPAGGDLSEHKATSVVVAAHRLAEPSVRNQLTELMSR 310
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFC 317
+ ++ + ++ A+ E A + + L D+ + +L+ + C
Sbjct: 311 RDLDAGDITRWQHLIAATGAVQWIEQLIDRRLSHALERIHTSPLDDT-VRTALVNMAAVC 369
Query: 318 LQR 320
+R
Sbjct: 370 TRR 372
>gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
Length = 326
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 11/304 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + +E+ N LI + S D+ L S GK+LRP+L +
Sbjct: 9 LSQITGKYATSLEECNELIQDTLKSSAPQTSDLAITLKKSRGKQLRPLLVFTIL----GQ 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LA E IH A+L+HDD++DD LRR + N ++L+GD + + +
Sbjct: 65 QTSANKLAAVCESIHCASLVHDDIIDDCRLRRNLPTMNSIHDNSIALLLGDLMFT-SIFT 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + TL EGEL Q + ++ VT++ YL V++ KT L S + +
Sbjct: 124 LSSCLPSWVTSESAQTIKTLIEGELLQQTYKCDIAVTKDQYLDVLQKKTGALLSFCTKAA 183
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
S +A Q Y G+ FQ+ DD D+ E K+ G D NG TLP IL
Sbjct: 184 SRLADKNPDDVQLAGEYANTFGLIFQIADDWADFVKAGTEDNKDRGADIGNGFVTLPWIL 243
Query: 241 AFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ K I + ++ +K+ + +++ + S +A+ +
Sbjct: 244 MLEHAPKELHEQLLELITSKQRCGMNHPLVKEIYALIQL---DEKMQVEINSLEHQARQA 300
Query: 298 LRCL 301
L +
Sbjct: 301 LESM 304
>gi|217968536|ref|YP_002353770.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217505863|gb|ACK52874.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 258
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
DME+V+ +I + +DV +I VV++++ G +R RP L LA+A L + G+
Sbjct: 10 AWLQHDMERVDAIIRAHMNNDVALIRQVVEFILH-GAERRRPALVLASARALGHGGERPH 68
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA A+E IH + LHDDV + S ++GN ++L+GD L + AF M+++
Sbjct: 69 ALAAAVELIHISLALHDDVTEASGGAADGEREGALFGNAGNILLGDLLYTSAFRMIVDLG 128
Query: 126 SQEAL 130
E +
Sbjct: 129 DMEVM 133
>gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5]
gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
Length = 301
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 111/307 (36%), Gaps = 50/307 (16%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DD 83
+ + + ++Y + GGKR+R L + TA + V +A A+E +H +L+H
Sbjct: 35 EERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVRVAAAVEMLHAYSLVHDDLP 94
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-------- 135
+DD LRRGK + + T++L GD L ++AF ++ E + E
Sbjct: 95 AMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEPDTHSDPEVRCELVLALAAA 154
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
G +S+ + + KT L + E +++ R +
Sbjct: 155 SGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFSAEAGAILGRAPGPQRHHIA 214
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
YG +LG AFQ+ DD+LD G +GK G+D GK T+ ++
Sbjct: 215 GYGRDLGAAFQIADDILDEEGSDASLGKTAGKDAAQGKATMVAVM--------------- 259
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ A +A L + L +
Sbjct: 260 -----------------------GIERARTHAAHLASQAAAYLDSF--GAKADLLRALAA 294
Query: 316 FCLQRLN 322
F + R N
Sbjct: 295 FTVNRRN 301
>gi|119495313|ref|XP_001264444.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
gi|119412606|gb|EAW22547.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
Length = 389
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/276 (18%), Positives = 103/276 (37%), Gaps = 5/276 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ Y+ GK +R L A + L+ ++ ++ + +HTA+LL DDV D
Sbjct: 76 EKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVPPESLSIITKVVGMLHTASLLVDDVED 135
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G ++ +++ A V + + A++ L G+
Sbjct: 136 NSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGM 195
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
L L E+ + ++ + +++ S +G+ FQ
Sbjct: 196 DLFWRDTLTCPTEEDYLDMVGNKTGGL---FRLAIKLMQAESTTGIDCVSLVNVMGLTFQ 252
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ + K + ED GK + P+I + + + S + E
Sbjct: 253 ICDDYLNLSNKTYTQNKGLCEDLTEGKFSFPIIHSIRS--NPRNHQLISILKQRTKDEEV 310
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
A M + T + KA + +
Sbjct: 311 KLYAISYMENTGSFAYTRKVVREFRDKAISLIDEID 346
>gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
Length = 330
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 121/320 (37%), Gaps = 36/320 (11%)
Query: 34 VKYLIFSGGKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + GGKR+RP A + A+E + L+HDD++D S
Sbjct: 12 LEDFVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDIIDAS 71
Query: 89 ALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQ 127
RRG +G ++L+GD L+ A M+ S
Sbjct: 72 TTRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASA 131
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGV 186
S + + G+ +S D + + V + KTA L + + +AG
Sbjct: 132 RISPVWSAMRTEVLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAALAGA 191
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+++ A + +G ++GIAFQL DD+L G+ GK G+D R GK T+ ++ QR
Sbjct: 192 DDTLVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRTVLFAMSLQRAD 251
Query: 247 KREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ +S ++ + A+ D E + ++L L S
Sbjct: 252 AEDPAAAALLREGIGTDLSDSDVDTLRTTITSLGAVADVEKQIEELVG---NALSTLAAS 308
Query: 305 ----SWKKSLMEVVDFCLQR 320
K+ L E+ +R
Sbjct: 309 TATTEAKQQLTEMAVAATRR 328
>gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478]
Length = 385
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 73/331 (22%), Positives = 117/331 (35%), Gaps = 25/331 (7%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----MLEYR 60
D + V + + + + + ++++ + GKR+R L LA
Sbjct: 65 TDCIADQLNLVARRLHEILVTGCSF-DPIYRHVLATPGKRIRAGLGLACFRLQPSAATVS 123
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ LACAIE H ++L+HDD+ D S LRRG + +G + + G L A +
Sbjct: 124 PAEAIDLACAIEMFHESSLIHDDICDGSLLRRGARSVPAAFGVRIAARAGFHLAGTALQI 183
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSK-----------NLDVTEEDYLHVIKSKT 169
+ + + + LS + V Y V +KT
Sbjct: 184 LARVVADNPAVFARVGEDPAITYLDQLSELSFGQLIETLPPAIDDSVLRRHYERVAGAKT 243
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LF A GV +AL Y L +AFQ++DDV D G + GK D
Sbjct: 244 GTLFRLACSYGGTAGGVDADGLRALMRYADQLALAFQIMDDVCDVEGGPSL-GKKSCGDL 302
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
PT PVI + + G + E + + A + A
Sbjct: 303 DRRVPTWPVIEWLAMRPGSRELWLSELTPSGVLQAE--------LVRSGATLAARAVAVH 354
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A +L P S + L E+ + R
Sbjct: 355 AAEAACRALDVFPPSVARDHLRELTVRVVSR 385
>gi|67522270|ref|XP_659196.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
gi|40745143|gb|EAA64299.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
gi|259486923|tpe|CBF85177.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 397
Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 108/302 (35%), Gaps = 9/302 (2%)
Query: 17 FLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
I +++ ++ +I + Y+ GK +R L A + + +A +
Sbjct: 89 DTIDEKLSMYWKAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQSCQAIATTV 148
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
H A+LL DD+ D S LRRG A V+G ++ +++ A + +S
Sbjct: 149 GMAHNASLLIDDIQDSSKLRRGVPCAHEVFGIAQTINSANYVYFLAQNQLFRLRSWPQAI 208
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ + Q D + A + + +
Sbjct: 209 SVF--NEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMIVRLLQTSSRQV 266
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
++ LG+ FQ++DD + R E K ED GK + P+ A G K
Sbjct: 267 IDVEQLVDVLGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPICHAIGEGAKNRTA 326
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
++ ++A I+ +L T Y +KA+ LR + + ++L
Sbjct: 327 LLHMLRLKTD-DMKIKQEAVCILDNAGSLDYTREVLYGLDRKARSLLREFKTPNPFMEAL 385
Query: 311 ME 312
++
Sbjct: 386 LD 387
>gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
Length = 338
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 20/303 (6%)
Query: 11 DMEKVNFLILKRI---------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++ ++ + + I DV +++ GGKRLR L L +
Sbjct: 3 ELSELQRALDEAIFRELPQTHPHPDVSAFYALLRDYPARGGKRLRGTLLLLSTAAHGAPW 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM- 120
+ + +A A+E L+HDD+ DDS RRG+ A G ++ VGD L +
Sbjct: 63 ERGLNVAAALELFQNWVLIHDDIEDDSEDRRGRPALHRTAGVPVALNVGDALHIYMWRTL 122
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ L ++ Q + + + L +
Sbjct: 123 LRELRGDARAAPETLPRLLEAFEWMISRTAEGQHLDLTWVAEGRFEISEAAYLEMVTLKT 182
Query: 175 AALEVSSLIA----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
A V + L+ G +LG+AFQ+ DDVL+ +V + G+ F
Sbjct: 183 AYYTVVGPLELGALCAGAEPDPRLRRAGEDLGVAFQIRDDVLNLMADVAYGKEFAGDLFE 242
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
+ + ++ + ++ +L + A +
Sbjct: 243 AKRTLVLAHFFAHAPPAEADAARRALARPRSAKGAEMLAVLEQLKRCGSLAYAQGVAEAR 302
Query: 291 GQK 293
+
Sbjct: 303 AAR 305
>gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 340
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 31/309 (10%)
Query: 40 SGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
+GGKR RP + +A L + A E +HTA ++HDDV+D RRG
Sbjct: 35 AGGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVS 94
Query: 99 -----------------LVWGNQTSVLVGDFLLSQAFC-------MVIETKSQEALEALS 134
G +V+ GD L A+ + + +
Sbjct: 95 GAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDASGVRDLTRSHLMEILDDA 154
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ A E + SL+ ++ +E F A L+ +++AG + V AL
Sbjct: 155 VFASAAGELIDVEFSLTADVPSVDEILRMERLKTAVYSFEAPLQAGAVLAGARPEVVAAL 214
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ ++GIA+Q+VDDVL G+ E GK D R GK T+ + A + E
Sbjct: 215 GDFDRDIGIAYQVVDDVLGVFGDEQETGKTNLGDLREGKRTVLIAHAVRSS---EWGEIS 271
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLME 312
+ + +S ++ + A E A A L +P+ + ++ L
Sbjct: 272 ALVGKDDLSRGEAALVRSVLESSGARAYAEGVARDLAVAAVARLDDPVVPE-ALRRELAP 330
Query: 313 VVDFCLQRL 321
V + L R+
Sbjct: 331 VAESVLGRI 339
>gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
Length = 265
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 54/305 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV- 84
+ + ++Y + +GGKR+RP+L + E D +A A+EFIH +L+HDD+
Sbjct: 1 MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60
Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+D+ RRGK+ + VLVGD LL++AF +V +KS + L++
Sbjct: 61 AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKSLGDKNKIELISKLSEYA 120
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-------AALEVSSLIAGVQNSVRQALKS 196
+ + +D+ E+ I + + AA+E+ + +++ R+ +
Sbjct: 121 GFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMVE 180
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y LGIAFQ+ DD+LD G E+GK D +N K T P I
Sbjct: 181 YSKLLGIAFQIKDDILDIEGNFEEIGKK-SNDAQNEKTTYPSIF---------------- 223
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
L ++ Y +KAK + + + +E+ D+
Sbjct: 224 ----------------------GLEKSKKLLQEYLEKAKKIIE--DEFEGDQLFLELTDY 259
Query: 317 CLQRL 321
R
Sbjct: 260 FGNRK 264
>gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
helveticus]
Length = 313
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 11 DMEKVNFLILKRICS------DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN- 63
+++ + I R+ S + +++ ++ + GKR+RP+L L TA L +
Sbjct: 15 ELQSMRKNIEHRLDSLLPQTEESDLVTQAMRDATLAPGKRIRPLLMLLTARDLGCEPSHP 74
Query: 64 -HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E IH A+L DD+ +D++A+RRG +G ++L LLS+AF
Sbjct: 75 GLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGLPTIHRKFGENVAILAAVALLSKAF 132
>gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
Length = 385
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 66/319 (20%), Positives = 118/319 (36%), Gaps = 39/319 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+V + + S ++ V ++ + GGKR+RP L
Sbjct: 36 AEVENALREFFTSRQALVDAVGGGYREAVTTLEDFVLRGGKRVRPAFAWTGWLGAGGDPR 95
Query: 63 -----NHVLLACAIEFIHTATLLHDDVVDDSALRR----------------GKVAARLVW 101
+ A+E + L+HDD++D S RR +
Sbjct: 96 GPGAGPVLRACSALELVQACALVHDDIIDASTTRRGFPTVHVEFEEQHRAGRWSGDSAHF 155
Query: 102 GNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
G ++L+GD L+ A M+ +S S + + G+ +S D
Sbjct: 156 GEGVAILLGDLALAWADDMIRESGITPDQSARISPVWSAMRTEVLGGQFLDISNEVRADE 215
Query: 157 TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + + V + KTA L + + +AG +S+ A + +G ++GIAFQL DD+L
Sbjct: 216 SIDAAMKVNRYKTAAYTIERPLHLGAALAGADDSLVSAYRRFGTDIGIAFQLRDDLLGVF 275
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFII 273
G+ GK G+D R GK T ++ QR + +S ++ +
Sbjct: 276 GDPAVTGKPSGDDLRAGKRTALFAMSLQRADAEDPAAAALLREGIGTDLSDADVDTLRNM 335
Query: 274 MRENRALVDTEYRAYSYGQ 292
+ A+ D E +
Sbjct: 336 ITSLGAVADVEKQIEDLVA 354
>gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 364
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 10/291 (3%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V
Sbjct: 73 GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 132
Query: 101 WGNQTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
G ++LVGD L + A + ++ A L+ L +G+ + +S V+
Sbjct: 133 HGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTATRKLIDGQAQDISYEHRERVS 192
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E+ L + +KT L + A+ + +++ G + L+ YG +LG+AFQ VDD+L G+
Sbjct: 193 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLGIWGD 252
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND------GKISVENLKKAF 271
GK D R K +LPV+ A G + + D S E
Sbjct: 253 PEATGKQTWSDLRQRKKSLPVVAALAAGGPACEELGRLLAADAKSNDFENFSEEEFAARA 312
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++ T A A +L + ++ L+ + DF + R
Sbjct: 313 ALIEAAGGREWTAEEARRQHAIAIRALDDVDMPQRVREQLVALADFVVVRK 363
>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 304
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 59/339 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
++ + V + + + DV ++ + + Y + +GGKRLRP L LA A ++
Sbjct: 6 TIQQYISQTASDVESALQTILPTSWDVPALLKESMMYSLQAGGKRLRPALVLAAAEAVKC 65
Query: 60 RG---DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ +ACAIE IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LL
Sbjct: 66 DSRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDAMAILAGDALL 125
Query: 115 SQAFCMVIETKSQE---------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ AF ++++ Q +E LS++A + + VT D L I
Sbjct: 126 THAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQGVTSIDQLRYI 185
Query: 166 K-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT+ L +L ++I G + + +G +G+AFQ+ DD+LD G+ ++GK
Sbjct: 186 HLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDLVGDEAKLGKK 245
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
D K T P ++ L ++
Sbjct: 246 TNSDVEQQKVTYPFLI--------------------------------------GLNESR 267
Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
AK +L + + L + D+ ++R +
Sbjct: 268 AEVERLTSDAKRALDRAGLEGPSR--LFGIADYLMKRDH 304
>gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135]
gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135]
Length = 348
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 68/339 (20%), Positives = 127/339 (37%), Gaps = 35/339 (10%)
Query: 12 MEKVNFLILKRICSDV---------------------EMIPDVVKYLIFSGGKRLRPMLT 50
++K+ I D + I +I GGKR+RPML
Sbjct: 7 LDKIEKNINNIFSQDHFLNLFKDKDLKLKLNIQKNTIKTIKAPAIEIINRGGKRIRPMLM 66
Query: 51 LATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
+ A L Y +N L+ +E H+ +L+ DD+ D + RRGK A L++G S+
Sbjct: 67 ILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIEDGAIKRRGKPAIHLIYGLDNSI 126
Query: 108 LVGDFLLS-----QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
+ + + +++ E L G+ ++L + D
Sbjct: 127 NTANLIYFLPAKLIQTSKLKKSQKLLIYENFFTTLSNLHLGQGIDIALHNGTYIPNLDEY 186
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + I S + L + + LG FQ++DD+ + + G
Sbjct: 187 ISLVELKTSCLFGMAGFLAGILTNNESKAKNLYNTFLKLGTCFQIIDDIKNIK--DGING 244
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF---IIMRENRA 279
K+ G+D GK +LP+I + E+ + + K E+ K+ ++ + A
Sbjct: 245 KDFGDDLIEGKKSLPIIYFLKEKLLDEQIIQELSAIKNKSINESKKEILKFSNMINSSSA 304
Query: 280 LVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ ++ A SY K + L + +K +M +V
Sbjct: 305 IQNSTNLAMSYLNKFTEELNSYALINKYKDMIMNIVKKI 343
>gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Rickettsiella grylli]
gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Rickettsiella grylli]
Length = 294
Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 14 KVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N L+ + + + + + D + Y + +GGKRLRP+ +L + +ACA
Sbjct: 11 RINGLLKQCLSNPPPLSKPLYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQDLDHIACA 70
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
IEFIH +L+HDD +D+ RRGK + +G ++L GD L + AF
Sbjct: 71 IEFIHAYSLIHDDLPCMDNDDWRRGKPSCHKQFGEAMALLAGDALQALAFD 121
>gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
NGR234]
gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
NGR234]
Length = 360
Score = 62.3 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 74/327 (22%), Positives = 123/327 (37%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
V L+ + + + D +++ + +GGKRLRP L + +L D +
Sbjct: 74 AVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTALLGGSADAAL 133
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A+E +H +L+H +DD LRRG+ + + T++L GD LL+ AF +V
Sbjct: 134 RIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSLLTFAFDIVAA 193
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKTAVLFSA 175
++ + + + LA + + KT L
Sbjct: 194 PETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQAMKTGALIRF 253
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IA R+ L+++G +G+AFQL DD+LD + MGK G+D GK T
Sbjct: 254 ACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTADAEAMGKATGKDAARGKGT 313
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + E + +AK
Sbjct: 314 LVGLH--------------------------------------GQAWAERQLEGLVTEAK 335
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ LR P + L+E F R N
Sbjct: 336 ELLR--PYGARSAILVEAARFVANRRN 360
>gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 286
Score = 62.3 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ V+ I + + + + D +Y +GG R+R L L A L + A A
Sbjct: 15 LRDVDAQIDRLLLPNSSRVADAARYHFSAGGARVRARLGLDAAAALNLSPQASLACAIAP 74
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +H A+L+HDD+ D A+RRGK + +G ++ GD L+S A+ +
Sbjct: 75 ELLHNASLVHDDLQDGDAMRRGKPSVWSRFGKDIAISTGDLLISAAYMAIAAHPYPALAL 134
Query: 132 ALSLVACTLAEGELRQLS 149
A Q
Sbjct: 135 RAMHDAVLYTIDGQTQDC 152
>gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2]
Length = 401
Score = 62.3 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 62/329 (18%), Positives = 112/329 (34%), Gaps = 34/329 (10%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIF--SGGKRLRPMLTLATALMLEY 59
+ + +E L + D+ + L+ GGK +RP+L +
Sbjct: 34 ESIAAEVSAGIEAFLELKAAEFLAISPDADDIGRALLEFTRGGKMIRPVLLWWGFQLASG 93
Query: 60 RGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV--- 109
+ A ++E +H A L+HDDV+D S RRGK A + ++ S
Sbjct: 94 DDSSRSALNGGVAEAAGSLELLHAAALIHDDVIDHSDTRRGKPALHRQFESRHSERRFQG 153
Query: 110 -------------GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
GD L+ + + +++S + + ++ L
Sbjct: 154 GAEPFGVAAAIVIGDICLALSEELFEKSQSVLGITPSARDLRATLRRDVMVGQYLDVLAE 213
Query: 157 TEEDYLHVI---------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
I L + + + G + +G+ LG AFQL
Sbjct: 214 VVPLDDARIGERAWEVLSFKSAKYSVEQPLLLGAALGGADEEQLAEISRFGLPLGQAFQL 273
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DDVL G+ GK G+D R GK T+ + + + + + D +S +
Sbjct: 274 RDDVLGIFGDPAATGKPAGDDIREGKRTVLIAESMKNLNSEQTQIMAERLGDPDLSDSEV 333
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ ++ E+ L E S +A
Sbjct: 334 AECVSMLTESGGLDAVESFIRSKHDEALS 362
>gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 338
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 15/318 (4%)
Query: 18 LILKRICSDVEMIPDVVKYL---IFS--------GGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + VV Y + + GGK +RP L L +A + +
Sbjct: 19 ALRATVDRLHPRLRHVVAYHRGWVDAEGAPLSGGGGKLVRPALALLSAQAAGAPAETGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A ++G ++L GD LL A +++E +
Sbjct: 79 AAVAVELVHDFSLLHDDLMDGDTERRHRPTAWTIFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
+ A ++ + + Q ++ + + + +S ++
Sbjct: 139 EPGRRAALILGAGVQDLVRGQAEDLMFEKRSDVSVAETLHMEDGKTGALLACSASLGAVL 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG + + AL YG LG AFQL+DD+L G+ + GK + D R+ K ++PV++A +
Sbjct: 199 AGAGDDMVNALAEYGSRLGTAFQLIDDLLGIWGDPSVTGKPVLSDLRSRKKSVPVVVALE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP- 302
G + G+ + L ++ T A + ++ LR L
Sbjct: 259 AGGAAAEELRAFLTGTGESTEAELTHIADLIERAGGRDWTTAEADGQLKACENVLRSLSM 318
Query: 303 DSSWKKSLMEVVDFCLQR 320
+ + L+ + F +R
Sbjct: 319 PAEIEAELLALARFVTER 336
>gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467]
Length = 286
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
Length = 286
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 64/149 (42%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++D + + +++ I + + + + D +Y +GG R+R L L A L
Sbjct: 4 MFGIKDRSAVLLTEIDAEIDRLLLPNPSRVADAARYHFSAGGARVRARLGLDAAATLNLS 63
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A E +H A+L+HDD+ D A+RRGK + +G ++ GD L+S A+
Sbjct: 64 PQASLACAIAPELLHNASLVHDDLQDGDAMRRGKPSVWSRFGKNIAISTGDLLISAAYMA 123
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLS 149
+ A + Q
Sbjct: 124 IAVHPYPALALCAMHDAVSYTIDGQTQDC 152
>gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
flavus NRRL3357]
gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
flavus NRRL3357]
Length = 273
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 97/269 (36%), Gaps = 5/269 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+++ + YL + GK +R L A LE D ++ I+ +H A+LL DD+ D
Sbjct: 2 KILTGPLDYLRENLGKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQDS 61
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S LRRG A ++G + + ++ A + + +L L Q
Sbjct: 62 STLRRGVPVAHSIFGVVQIINLANYAYFVAQRELTNLTNPLSLSIY---TEELLHLHRGQ 118
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
D + ++ + +++ LG+ FQ+
Sbjct: 119 GMELHWRDTLQCPSEEEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVETLGLLFQI 178
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD + + + K ED GK + P+IL+ + + I+V
Sbjct: 179 RDDYQNLQSDTYSTNKGFCEDIGEGKFSYPIILSIRSRPGDLRLLSILKQRSEDITVR-- 236
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKD 296
K A + + E + S Q+A++
Sbjct: 237 KYAVEYIDSTGSFDYCERKITSLLQQARE 265
>gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc argentinum KCTC 3773]
Length = 324
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
+ + V + E I ++ + + GK +RP LTL + + +
Sbjct: 8 LSEPLVAVLNRMATSWHIGFEDIDTAIRSQLNA-GKLVRPALTLIFSKLTTTPYNQQAIQ 66
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L ++E +H ATL+HDD++D+S LRRG + + +G T+V GD+LL+ F ++ +T
Sbjct: 67 LGASVELLHLATLIHDDIIDESKLRRGYESIQSRFGKDTAVYAGDYLLTGMFSLLEQTSL 126
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+A + + GEL Q N+D T + YL IK KTA LF ++ +
Sbjct: 127 PQANQLALTALQDILFGELVQKHHRFNVDATFDTYLSQIKGKTAALFKLSVTFGLISGQA 186
Query: 187 QNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNE--MGKNIGEDFRNGKPTLPVILAFQ 243
+ + G NLGI FQL+DD LD+ + +GK IG+D RNG T PV+ A
Sbjct: 187 IADDLQDTVSQLGENLGITFQLLDDYLDFESITQQLSLGKPIGQDIRNGIYTAPVLFALT 246
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + IS ++ + ++ ++ A+ Y ++ + + LP+
Sbjct: 247 D-PTVRDDIRALLMQRDLISDADMIRLHELITQSHAMTKLNALLTDYTEQLQALISNLPE 305
>gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027]
Length = 293
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKTAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1]
Length = 316
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 107/302 (35%), Gaps = 11/302 (3%)
Query: 26 DVEMIPDVVKYLI-FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+ + + YL + GK LR +L L+L + + I+ +H ++LL DD+
Sbjct: 14 NEKTLTTPYHYLADQTQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVIDTLHLSSLLIDDI 73
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D+S LRR + + +++G ++ +++ A ++ + E ++
Sbjct: 74 EDNSKLRRSRPCSHMIFGVPQTINCANYMYFVAMRLLTDAIENEDKRLVAQNVFLDEMVN 133
Query: 145 LRQLSLSKNLDVTEEDY---LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
L + + + + L+ + + L + L
Sbjct: 134 LHRGQGLDLHWRENNECPSEQEYVNMVMNKTGGLFRLSAKLMNLLADQPCDKLITLSNML 193
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+ +Q+ DD L+ V K ED GK + P+I + + +
Sbjct: 194 GVIYQIKDDYLNLISNVYNKNKGYCEDITEGKFSFPIIHSINT--NPTNKELQRILKLRT 251
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
E A IM+ + +A++ + + D + ++ L L R
Sbjct: 252 EEHELKLHALNIMKSTNSFEYCREALRDLENQAREVIAEVTQDPAIREKLTS----TLAR 307
Query: 321 LN 322
L+
Sbjct: 308 LS 309
>gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346]
Length = 293
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK IG D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKIGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322]
gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8]
gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248]
gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109]
gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411]
gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322]
gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8]
gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411]
gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109]
gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248]
gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000]
gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017]
gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244]
gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302]
gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62]
gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF]
Length = 293
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 340
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 31/309 (10%)
Query: 40 SGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
+GGKR RP + +A L + A E +HTA ++HDDV+D RRG
Sbjct: 35 AGGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVS 94
Query: 99 -----------------LVWGNQTSVLVGDFLLSQAFC-------MVIETKSQEALEALS 134
G +V+ GD L A+ + + +
Sbjct: 95 GAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDASGVRDLTRSHLMEILDDA 154
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ A E + SL+ ++ +E F A L+ +++AG ++ AL
Sbjct: 155 VFASAAGELIDVEFSLTADVPSVDEILRMERLKTAVYSFEAPLQAGAVLAGASPAIVSAL 214
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G ++GIA+Q+VDDVL G+ E GK D R GK T+ + A + E
Sbjct: 215 GDFGRDIGIAYQVVDDVLGVFGDEQETGKTNLGDLREGKRTVLIAHAVRSS---EWGEIS 271
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLME 312
+ + +S ++ + A E A A L +P+ + ++ L
Sbjct: 272 ALVGKDDLSRGEAALVRSVLESSGARAYAEGVARDLAVAAVARLDDPVVPE-ALRRELAP 330
Query: 313 VVDFCLQRL 321
V + L R+
Sbjct: 331 VAESVLGRI 339
>gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 295
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 84/323 (26%), Positives = 141/323 (43%), Gaps = 51/323 (15%)
Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
E+VN L+ + I + + + ++Y + +GGKR+RP+L L T ML + A A
Sbjct: 11 EEVNQLLSETIPNSKLNTNLEESMRYSLEAGGKRIRPVLLLLTLEMLTDQYKKGFSSALA 70
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-- 126
+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++AF M++ S
Sbjct: 71 LEMIHTYSLIHDDLPPMDNDDYRRGKLTNHKVFGEWKAILAGDALLTKAFDMIVNDDSLN 130
Query: 127 -------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ L S + L S ++ + + +KT L A+
Sbjct: 131 DVAKVKLIKRLSFASGHLGMVGGQTLDMQSEGAETNIDLDTLEKIHNAKTGALLKFAVMA 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ IA +N V AL+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 191 AVDIAEPENEVSNALESYSEHLGLMFQIKDDLLDIYGDEAKLGKAVGSDIENDKSTY--- 247
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
++ + A E + + KA L
Sbjct: 248 -------------------------------VSLLGQQGA----EDKLKHHTDKAYKCLN 272
Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322
LP +L+ +++ R +
Sbjct: 273 QLPKQYNTDNLVYIIELFNNRES 295
>gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
Length = 280
Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 75/321 (23%), Positives = 125/321 (38%), Gaps = 51/321 (15%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACA 70
M VN + D + ++Y++ + GK+LR L +A+ M E D A A
Sbjct: 1 MSDVNQP-EAPLHCDDPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATA 59
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE++HT +L+HDD+ LRRGK V+ T++L+GD L + AF ++ E +
Sbjct: 60 IEWLHTYSLVHDDLPAMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDERLA 119
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSS 181
+ L L+ + + LD+ T E + + KT LF AA+ +
Sbjct: 120 SGTRLKLITLIANAVGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGA 179
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ A Q L + +G+AFQ+ DD+LD +GK G+D K T L
Sbjct: 180 VCANATEQDIQRLDQFASTIGLAFQVADDILDVTENSATLGKTAGKDIAVEKSTYVSCL- 238
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + + A +A L
Sbjct: 239 -------------------------------------GLEEAQNEAERLLDEAMTCLN-- 259
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P + L+++ ++R +
Sbjct: 260 PYGDRAQPLVDLAIAMVRRKH 280
>gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B]
gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A]
Length = 293
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583]
gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22]
gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583]
gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22]
gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341]
Length = 293
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
Length = 359
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 72/350 (20%), Positives = 123/350 (35%), Gaps = 47/350 (13%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV----EMI---PDVVKYLIFS--GGKRLRPMLTL 51
M ++E V+ + + +D + +V + + S GGKRLR +L L
Sbjct: 1 MALIESRIAD---AVDRFM--ALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLAL 55
Query: 52 ATALMLEYRG-----------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ +G D + LACAIE TA L+HDD++DDS LRRGK AA
Sbjct: 56 HAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAHKA 115
Query: 101 WGNQTSVLVGDFLLSQA-----------FCMVIETKSQEALEALSLVACTLAEGELRQLS 149
G + L + +S E E+ Q+
Sbjct: 116 LGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQVL 175
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA---------GVQNSVRQALKSYGMN 200
++ + + V +++ + G+
Sbjct: 176 DLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLP 235
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG AFQL DD+LD G GK +G D R GK T+ + A +R++ +
Sbjct: 236 LGQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQRQRRTLIDMFSSQ 295
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKK 308
+++++ + A+ + R + Q ++ LP +
Sbjct: 296 SRGDDDVRRCIELFEGTGAIDRSRRRIRALWQGTLHAIGDLRLPPQDERT 345
>gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276]
gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276]
Length = 322
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 103/290 (35%), Gaps = 10/290 (3%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++ + Y+ + GK +R L A L LE D+ V++ + +H A+LL DD
Sbjct: 17 DSQENILMEPYVYISQNPGKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNASLLMDD 76
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136
V D+S LRRG A ++G ++ +++ AF +++ +S +
Sbjct: 77 VEDNSELRRGLPVAHTIYGVPQTINTANYVYFLAFQELLQLRSGVMGKGKDKEVDLVVAV 136
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
L + Q D L ++ + ++
Sbjct: 137 NEELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKLMMAKSDSNVNYVP 196
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+ + FQ+ DD ++ + + K ED GK + PV+ + +
Sbjct: 197 LVNLISVWFQIRDDYMNLQSPAYKSNKGFCEDLTEGKFSFPVVHGVR--ADTSNRQILNV 254
Query: 257 INDGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ SV+ + + + ++ T + + ++ L +
Sbjct: 255 LQKRTSSVDLKQHTVDYLTNHTKSFHYTRKVLKELEAQILEEIKALGGND 304
>gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens
ATCC 23877]
Length = 354
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/339 (20%), Positives = 117/339 (34%), Gaps = 42/339 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI------------FSGGKRLRPMLTLATALMLEYR 60
V + + + + ++ Y GGK +R L + A
Sbjct: 25 ALVRPALEEAVGRLHPWVGEMAAYSFGWCEVGGEPARDARGGKGVRQALAVLGAEAAGAS 84
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
G V A A+E +H +LLHDD++D RR + A +G +VL GD L + A
Sbjct: 85 GRAGVPAAVAVELVHAFSLLHDDIMDGDPDRRRRPAVWKAYGTGPAVLAGDALFALAVET 144
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + L A + V +Y + + KT L
Sbjct: 145 LAVAPAGPRTVRLLSTALNDLVRGQADDLLFAERPWTGPERVRPHEYRAMAEHKTGSLLG 204
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A + +++ G + AL G LG+AFQ+VDDVL G+ GK + D R K
Sbjct: 205 CAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVVDDVLGIWGDPAITGKPVHGDLRERKK 264
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T PV+ + + + + + +++ E +A
Sbjct: 265 TFPVL----AALEAPRPAARRLAALLASEPADPEAVAVLIDEAGGRRAA-------LAEA 313
Query: 295 KDSLRCLP-------------DSSWKKSLMEVVDFCLQR 320
L + + + L ++DF ++R
Sbjct: 314 HRCLGAVEAALTEVAAAAGTAGAGAARELRSLLDFLVRR 352
>gi|312196601|ref|YP_004016662.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311227937|gb|ADP80792.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 372
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/329 (20%), Positives = 124/329 (37%), Gaps = 31/329 (9%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNH--VLLACAIEFIHTATL 79
+ +E++ V + ++ GGKRLR + + A+E +H L
Sbjct: 46 LDPSLEVLVAVARQMVLGGGKRLRSVFAFWGWRGAAGPDRPVAPVLPALGALELLHACAL 105
Query: 80 LHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVIE 123
+HDDV+DDSA RRG A +G+ ++L+GD + A +
Sbjct: 106 VHDDVMDDSATRRGLPTAHRAVAARHVALGWPGDPDEFGHHAAILIGDLCMVWADRLAGN 165
Query: 124 TKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ A E + G+ L + D + ++ + ++
Sbjct: 166 AELPAATLLTAREGYDRMRLEAIAGQFLDLLGNAARDPSPVEHALRVARLKTASYTVVRP 225
Query: 179 VSSLIA----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ ++ + YG+ +G AFQL DD+L G+ + GK +GED G+
Sbjct: 226 LVYGAMLGGATGDGTLARVYTRYGLAVGEAFQLRDDLLGVYGDPHVTGKPVGEDLLRGRS 285
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T+ V LA T E ++ + S E+L + ++ A+ A
Sbjct: 286 TVLVELARSSATGTEAAELRALLARR--SPEDLPRLAALITRTGAVTQLNRMIAERVAHA 343
Query: 295 KDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
++ P D +++L + QR +
Sbjct: 344 FAAVNDGPLDPQTREALCRLATAASQRSS 372
>gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
oeni ATCC BAA-1163]
gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
oeni ATCC BAA-1163]
Length = 278
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG 61
+D + + + ++N + + I ++ Y + S GKRLRP+LTLAT A
Sbjct: 5 KFKDFSNRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVIN 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
D+ + A A+EF+H +L+HDD+ + + + +
Sbjct: 65 DSTIEAATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTW 103
>gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
Length = 361
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/308 (22%), Positives = 118/308 (38%), Gaps = 18/308 (5%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLAT---ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ Y + KRLRP L +A A A +E +HT L+HDDV D
Sbjct: 53 LTQARAYTL-RPAKRLRPALVMAGHCLARGSAVVPSGLWRFAAGLELLHTFLLIHDDVAD 111
Query: 87 DSALRRGKVAARLVWGNQTS-----VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
+ LRRG + + V+VGD L ++A +++ + +
Sbjct: 112 QAELRRGAAPLHRMLAPGRAGEDLAVVVGDHLFARALEVMLGSGLTCVAGVVQYYLGVCR 171
Query: 142 EGELRQLSLSKNLDVT------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
Q + F A L +++ G + + + L+
Sbjct: 172 HTAAGQYLDLDLGRAPLAEVTLFQTLRVAHLKTARYGFCAPLVCGAMLGGASSGLVEELE 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G ++G+A+QL DD+L G+ N GK DF GK T PV+ AF R T+ E+ ++
Sbjct: 232 RVGRHVGLAYQLRDDLLGLFGDSNVAGKAADGDFLQGKRTFPVLAAFARATEAERTELEA 291
Query: 256 TINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLME 312
+ L +A ++ E + A+ SL+ LP+ + ++ L
Sbjct: 292 LWALPVEQKDAAALARARALVESCGGRAACERMVVRASRAARRSLQSLPNPNGVRELLDA 351
Query: 313 VVDFCLQR 320
++ R
Sbjct: 352 LIARLAHR 359
>gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
Length = 275
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG 61
+D + + + ++N + + I ++ Y + S GKRLRP+LTLAT A
Sbjct: 2 KFKDFSNRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVIN 61
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
D+ + A A+EF+H +L+HDD+ + + + +
Sbjct: 62 DSTIEAATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTW 100
>gi|195480405|ref|XP_002086662.1| GE23254 [Drosophila yakuba]
gi|194186452|gb|EDX00064.1| GE23254 [Drosophila yakuba]
Length = 446
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 84 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 137
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 138 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 197
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 198 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 257
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 258 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 317
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 318 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 377
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 378 YSQLEAGKQSVDNIDYDKIHKAILAGPALTKTKELQRKHTAAALAVLQHFPATDARQALE 437
Query: 312 EVV 314
++
Sbjct: 438 NII 440
>gi|167948321|ref|ZP_02535395.1| hypothetical protein Epers_17969 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 61
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 33/57 (57%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++ ++ + A+ TE A+ ++AK +L +P+S ++++LM + DF + R +
Sbjct: 5 EIEFVMQQVQASDAITYTETLAHEEAERAKTALSLIPNSPFREALMALADFSVARTH 61
>gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012]
Length = 293
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104]
gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98]
gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712]
gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613]
gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134]
gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860]
gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470]
gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635]
gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102]
gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104]
gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98]
gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712]
gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613]
gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76]
gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860]
gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134]
gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102]
gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635]
gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470]
gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031]
gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043]
gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312]
gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342]
gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630]
Length = 293
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
Length = 291
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ K + +N + S ++I D Y + GGKR+RP+L L T + +
Sbjct: 1 MSNIIEKHRDFINKYLNVYFNDKGSYNKIIYDSASYSLNIGGKRIRPILFLLTYGLYKEN 60
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A AIE IHT +L+HDD +D+ LRRG +G +VL GD LL++A
Sbjct: 61 YKDVIEMASAIEMIHTYSLIHDDLPCMDNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAM 120
Query: 119 CMV 121
++
Sbjct: 121 SLM 123
>gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
Length = 359
Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 74/357 (20%), Positives = 129/357 (36%), Gaps = 37/357 (10%)
Query: 1 MKMLEDL------TLKDMEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTL 51
M+ + +L +++ +++ + + V +L + GGKR+RP
Sbjct: 1 MQNIPELADIPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAW 60
Query: 52 ATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL--------- 99
A L + A ++EFI L+HDD++D S RRG
Sbjct: 61 AGYLAAGRGEEDPVAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRES 120
Query: 100 -------VWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELR 146
+G ++LVGD L A M ++ + + + L
Sbjct: 121 EYLGDPEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRARSPWRGMRTEVIGGQLLD 180
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + E A L + + AG + A + YG ++GIA+Q
Sbjct: 181 ISLEAAGSESVELANSVNRYKTAAYTIERPLHLGAATAGASEELIAAFRGYGHDIGIAYQ 240
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISV 264
L DD L G+ GK G+D R GK T + LA QR + + +
Sbjct: 241 LRDDQLGVFGDPAVTGKPAGDDLREGKRTELLALALQRADESDPQAAATLRKLIGRTSDP 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
+ L + I+ ++ A + E R + Q LR D + ++L ++ R
Sbjct: 301 QELSRLAQIIADSGAPEEIERRIDALTQSGLQHLRAAQVDPAVTETLEQLAIKATAR 357
>gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
IMCC3088]
gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
IMCC3088]
Length = 361
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 104/296 (35%), Gaps = 13/296 (4%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74
+ + + + + GK LR L + A A A+E +
Sbjct: 44 LERAFKTTVQQAPSSLREPCREHFKKRGKHLRGKLAYSAARQYGSSSQAASSWAAAVELL 103
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDD+ D + RRG+ +G +V +GD+L+++A+ ++ S
Sbjct: 104 HNASLVHDDLCDKDSKRRGQQTTFRQYGEAVAVCLGDYLIAKAYEFAARAGAESLHLLSS 163
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
++ + Q + + I V + + Q++ L
Sbjct: 164 SISALVGG----QAAEFASAGYPAWSEYEQIAVSKTAPLLGMGVVGAALINQQSAPEAEL 219
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+ Y + + FQ+++D+ ++ G G VI +F +
Sbjct: 220 EHYFYHAALCFQMINDIRNFSGSD---GAEAPCSDLANCRPNAVIASFTETLPKHLKARF 276
Query: 255 STINDGKISVENLK------KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
S D + E + + + + + A DT R + + A SL LP +
Sbjct: 277 SLWADKIRTGEIIADTVETREWWQRLCASDAFSDTAQRLHFHFNMASASLVRLPPN 332
>gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 111/291 (38%), Gaps = 3/291 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVV 85
+ + + Y+ GK +R L L L + + + + +H A+LL DD+
Sbjct: 16 DKQLLEPYLYINGVPGKDVRGKLIDCFQLWLGVESEGVLEEVKAIVADLHNASLLIDDIE 75
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG+ A ++G + + +++ A S+ A++ L G+
Sbjct: 76 DNSKLRRGQPVAHSIFGVASVINTANYVYFMALERCFLLGSEGAMKVFVSEMLNLHRGQG 135
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + ++ + ++ L V L + NLG+ F
Sbjct: 136 QDIQW-RDTTTCPTESQYLAMVTDKTGGLFRLAVGLLQSFATKMKDVDFVPLVNNLGLYF 194
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD+++ E K+ ED GK + P+I + +I +
Sbjct: 195 QIRDDLINLADEEYMKSKSFCEDLTEGKFSYPIIHYVSSIPQSSTAAQLLSILKQRTEDV 254
Query: 266 NLKK-AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++K+ A +M E +L T + + + L + L+E++D
Sbjct: 255 DVKRYAQRLMFEAGSLQYTREKCTQLKDEIVQQIADLNGNEPLLRLIEMLD 305
>gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12]
gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
Length = 290
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 123/320 (38%), Gaps = 51/320 (15%)
Query: 15 VNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + + I + ++Y GGKR+RP L + +L + A A+E
Sbjct: 8 FNEKLEEILAQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALE 67
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH+ +L+HDD+ +D+ RRG++ +G ++L+GD LL+ AF +++ +
Sbjct: 68 MIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVS 127
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---------AALEVSS 181
L L + + I KT + V+
Sbjct: 128 SEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILVAC 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ R+AL+ YG N+G+AFQ+ DD+LD G+ +MGK + D + K T P I
Sbjct: 188 ILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDFTQMGKAVKSDEKLQKSTYPSIF- 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L ++ ++A+ +L +
Sbjct: 247 -------------------------------------GLEKSKEMLTESLREARKALEEV 269
Query: 302 PDSSWKKSLMEVVDFCLQRL 321
+ +E+ +F +R
Sbjct: 270 FTEEDLQEFLELTEFMEKRT 289
>gi|194875285|ref|XP_001973569.1| GG16155 [Drosophila erecta]
gi|190655352|gb|EDV52595.1| GG16155 [Drosophila erecta]
Length = 446
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 84 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 137
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 138 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 197
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 198 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 257
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 258 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 317
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 318 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 377
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 378 YSQLEAGKQSVDNIDYDKIHRAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 437
Query: 312 EVV 314
++
Sbjct: 438 NII 440
>gi|194749103|ref|XP_001956979.1| GF24292 [Drosophila ananassae]
gi|190624261|gb|EDV39785.1| GF24292 [Drosophila ananassae]
Length = 453
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/363 (11%), Positives = 94/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 91 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 144
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 145 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVATFD 204
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 205 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 264
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + A + A + + ++ A G + + +
Sbjct: 265 YKPGTFQRPSLSVGVDFNEHDVMAPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQGSLK 324
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P +
Sbjct: 325 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPTLPLDATFSLVSAPVLFHLEHDPEM 384
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + K + AL T+ + A L+ P + +++L
Sbjct: 385 YADLEAGKQSVDNIDYDKIHRAILAGPALNKTKELQRKHTAAALAVLQHFPATDARQALE 444
Query: 312 EVV 314
++
Sbjct: 445 NII 447
>gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 425
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 116/318 (36%), Gaps = 34/318 (10%)
Query: 13 EKVNFLILKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLA 68
E+V+ + + SD ++ + GGKR+RP L + L
Sbjct: 56 ERVD----EAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLG 111
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDF 112
A+E I + L+HDDV+D S LRRGK A +G +VL GD
Sbjct: 112 VALELIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDL 171
Query: 113 LLSQAFCMVIE------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
L+ A V E + + ++ +A L + E+
Sbjct: 172 ALAWADDTVAETALSAVQRRRIGPLWRAMRTEMVAGQYLDLRGQVRGGSSVEQALRTACL 231
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ L + + +AG + AL+S G GIAFQL DD+L G+ GK G
Sbjct: 232 KSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSG 291
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVD 282
+D R GK T + +A + G ++ E+L + ++ A
Sbjct: 292 DDIREGKSTYLLAVARRWAEAAGDERSLAVLGRVPGGGDLAEEDLAEVRGVLEATGARAH 351
Query: 283 TEYRAYSYGQKAKDSLRC 300
E +A A L
Sbjct: 352 VERKAERLRDHALRRLAQ 369
>gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus]
gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus]
Length = 425
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 73/312 (23%), Positives = 111/312 (35%), Gaps = 30/312 (9%)
Query: 17 FLILKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
I + + SD ++ + GGKR+RP L + L A+E
Sbjct: 55 DRIDEAVRSDASFCEELARRVADFTLEGGKRMRPRLLWWGMRSCGAAETAAALRLGVALE 114
Query: 73 FIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQ 116
I + L+HDDV+D S LRRGK A +G +VL GD L
Sbjct: 115 LIQSCALIHDDVMDRSRLRRGKPAMHIGLAERAGLSPDSERGSDFGASAAVLAGDLALVW 174
Query: 117 AFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT----A 170
A V ET + + +L E Q + +++ +
Sbjct: 175 ADDTVAETVLSAAQRRRIGALWRAMRTEMVAGQYLDLRGQLSGGSSVAQALRTACLKSAS 234
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + +AG + AL+S G GIAFQL DD+L G+ GK G+D R
Sbjct: 235 YSVERPLAIGAALAGADDRTTDALRSAGRCAGIAFQLRDDLLGVFGDPALTGKPSGDDIR 294
Query: 231 NGKPTLPVILAFQRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
GK T + +A + ++ E+L ++ A E +
Sbjct: 295 EGKSTYLLAVARNSAEASGDEQALAVLGRATGNADLTEEDLADVRGVLEVTGARAHVERK 354
Query: 287 AYSYGQKAKDSL 298
A A L
Sbjct: 355 AEHLRDHAVRRL 366
>gi|89675441|gb|ABD77587.1| geranyl diphosphate synthase [Vitis vinifera]
Length = 112
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS------SWKKSLM 311
G + ++ A + ++R + T A + A +++ LP+S +++L+
Sbjct: 42 KRGLDNPADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDSLPESGDEDVLRSRRALI 101
Query: 312 EVVDFCLQRL 321
++ + R
Sbjct: 102 DLTHRVITRT 111
>gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans]
gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans]
Length = 326
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 104/304 (34%), Gaps = 10/304 (3%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ + YL S GK R L E +++ +E +HT++LL DD
Sbjct: 20 SEEESNLRRPFDYLTSSPGKNFRAELIQIFNSFYELPDHRIAIISKLVETLHTSSLLIDD 79
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-------EALSLV 136
+ D S RRG AA LV+G ++ +++ A + E + +
Sbjct: 80 IEDSSEWRRGLKAAHLVYGVPMTINTANYMYFYAMECLKELGNGCDDLSLNKLLIIFNEE 139
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
L G+ + V E + + S ++L
Sbjct: 140 MMDLHRGQGLDIYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLMEVFSPSFSGAKSLVP 199
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
LGI +Q+ DD ++ + K +D GK + P+I + G+ +
Sbjct: 200 LSNLLGILYQIRDDFMNLQDAKMIENKGFADDVSEGKLSFPIIHGIKHGSLNGNSLVWDI 259
Query: 257 INDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKD-SLRCLPDSSW-KKSLMEV 313
+ K+ + + ++ T + G K+ L + D + +L +V
Sbjct: 260 LKQRTHDDALKKRLVSYLEGTSGSMEYTRRKVKDLGVLIKEKYLSSMQDRGYDSSALEKV 319
Query: 314 VDFC 317
VD
Sbjct: 320 VDRL 323
>gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
Length = 293
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFITEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
Length = 350
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 122/313 (38%), Gaps = 22/313 (7%)
Query: 27 VEMIPDVVKYLI--------------FSGGKRLRPMLTLATALMLEYRGDN----HVLLA 68
V+ +P+ ++++ GGK +RP L LA+A V A
Sbjct: 39 VDRLPEEIRHIAGYHAGWWDAEGRPRQGGGKAVRPALVLASAWAAGGEDAETVRAAVPAA 98
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
A+E +H +LLHDD++D RR + AA V+G ++L GD +
Sbjct: 99 VAVELVHDFSLLHDDIMDGDLTRRHRPAAWSVFGVGEAILAGD---VLLTLALDLLAGSP 155
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L L+ L G+ L+ DVT + + KT L A E+ +L G
Sbjct: 156 GLRVLTGSLLRLCSGQSADLAFETRTDVTLAQCVEMAAGKTGALLGCACEIGALAGGAGQ 215
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+G +LG+AFQL DD+L G+ GK + D K +LPV+ A GT
Sbjct: 216 DRAGLFGRFGHHLGLAFQLTDDLLGIWGDPAVTGKPVFSDLAARKKSLPVVAALTSGTPA 275
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWK 307
+ + D + +L A ++ A + A + A LR P
Sbjct: 276 GERLARLYHGDRILDERSLAHAADLIEAAGARAWAQREAEANLAAALACLRQADPAPEAA 335
Query: 308 KSLMEVVDFCLQR 320
L + +R
Sbjct: 336 GDLRLLAQLITRR 348
>gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio
Cholerae
Length = 302
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 10 LEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 69 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 128
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 129 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 188
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 189 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 248
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 249 QELNKSTYPALL--------------------------------------GLEGAQQKAH 270
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 271 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 302
>gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 374
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 11/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R L + A D+ V A A+E +HT +LLHDD++D RR + +
Sbjct: 85 GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDIMDGDGTRRQRETVWKAY 144
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD LL+ A + E A+ ++ TL+ Q +
Sbjct: 145 GTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLSGLARGQAEDLLLAARPWTGP 204
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V ++Y + + KT L A + L+ G V AL G +LG+AFQ VDD+L
Sbjct: 205 GAVRTDEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAFQAVDDLLG 264
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A R +R + + +A +
Sbjct: 265 IWGDPAVTGKPVHSDLRERKKTYPVLAALGRDDRRSAELAGILDSPVPLDEAGALRAAAL 324
Query: 274 MRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQR 320
+ T A + A+ L L + + ++ F L+R
Sbjct: 325 VEACGGRDATLEEARHHLDAARVCLRSASLAPRAAGEI-EVLLGFLLRR 372
>gi|67970126|dbj|BAE01407.1| unnamed protein product [Macaca fascicularis]
Length = 97
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
MGK D + G T PV+ A Q+ + + G ++ +A + ++ +
Sbjct: 1 MGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGV 55
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
T Y A Y +A + L S + +L+++ + L R
Sbjct: 56 QQTTYLAQQYCHEAIREISKLRPSPERDALIQLSEIVLTR 95
>gi|156543975|ref|XP_001605067.1| PREDICTED: similar to candidate tumor suppressor protein [Nasonia
vitripennis]
Length = 394
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/340 (12%), Positives = 93/340 (27%), Gaps = 40/340 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ + + + G ++ L +
Sbjct: 61 SLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLIYNGRNNMQAWG-----LIVLLISKA 115
Query: 57 LEYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ + + LA E I T L+H +V+ + A
Sbjct: 116 AGHINVDDMEEDKAAGVLHSQRALAEVTEMIRTGHLVHKGLVNMQPGVYPEPAEMNDMTF 175
Query: 104 QTS-------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
L+G+ A E + L Q + ++
Sbjct: 176 GNKIALLSGDYLLGNSSAELAALRNQELVELMSSAIRDLAEAEFIGRRDSQNNPLPSVPP 235
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ V + + SA + G + + L
Sbjct: 236 ADRTDYAVNEWTLRNVLSAGALLGKSCKGTLKLGGHSKDIQELGYNFGKHLALAWQACLD 295
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIM 274
+ K+ F + + I+ G SV N+ K F I+
Sbjct: 296 LSPFINKDRSTPFSLCSAPIMFHIEHDPSI-------LIEIDKGLESVANVDYGKVFDIV 348
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ T+ + + Q+A + L +S + +L ++
Sbjct: 349 VSGPGIELTKKLQHEHSQRAMEVLNVFEESDARTALSNII 388
>gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 304
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L + E++ + + + + +++ ++ + GKR+RPML + A L +
Sbjct: 16 LTEHLASVRERIEKRLNDLLPAGGNERDLVAIAMREGTLAPGKRVRPMLLMLAADGLGHD 75
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ L CA+E IH A+L+ DD+
Sbjct: 76 SSAALELGCAVEMIHAASLVLDDMPCMDD 104
>gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855]
gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855]
gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137]
Length = 293
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQKLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
SK121]
gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
SK121]
Length = 379
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 71/350 (20%), Positives = 132/350 (37%), Gaps = 46/350 (13%)
Query: 15 VNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLEYRG--- 61
+ S E++ ++ ++ + GGKR+RP L
Sbjct: 32 FEAALRDFFDSRRELVSNIGGGYEEAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGK 91
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGN 103
D + A+E + L+HDD++D S RRG +G
Sbjct: 92 NADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFENQHRDEEWSGDSAHFGE 151
Query: 104 QTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++L+GD L+ A M+ + S + + G+ +S D T
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPEAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + V + KTA L + + + G + A +++G ++GIAFQL DD+L G+
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELVDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMR 275
+ GK G+D GK T+ +A R + + N +++ + ++
Sbjct: 272 PSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDTEVDTLRQVIT 331
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDS----SWKKSLMEVVDFCLQRL 321
+ A+ D E + + + A ++L S K L ++ +R
Sbjct: 332 DLGAVTDVETQIDTLVEAAANALDS---STATAESKARLTDMAIAATKRS 378
>gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
Length = 312
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 48/312 (15%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
IL + + + ++Y + +GGK LR L + +A + A AIE +H
Sbjct: 42 QILHGLDGLDGTVAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAY 100
Query: 78 TLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-----MVIETKSQEAL 130
+L+HDD+ LRRG+ + W T+VL GD L + AF + + +
Sbjct: 101 SLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDAERVALV 160
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L+ A + + ++ + + + ++ +
Sbjct: 161 TGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAGDD 220
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
AL+SY NLG+AFQ+ DD+LD G+ +GK +G+D GK T +L
Sbjct: 221 AAALRSYARNLGLAFQIADDILDVEGDAATVGKAVGKDADAGKATFVSLL---------- 270
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
L RA A D+L P S ++L
Sbjct: 271 ----------------------------GLDPARARARDLVDAACDALS--PYGSDAETL 300
Query: 311 MEVVDFCLQRLN 322
+ F + R +
Sbjct: 301 RDAARFVISRKS 312
>gi|310792814|gb|EFQ28275.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 433
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 108/279 (38%), Gaps = 5/279 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
++I YL GK R L A + LE ++ ++ + +HTA+LL DDV
Sbjct: 138 KEKVIAGPFDYLSALPGKDFRSQLIQAFNVWLEVPQESIDVITNVVGMLHTASLLIDDVE 197
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S+LRRG A ++G ++ +++ +A V K+ +A+ + L G+
Sbjct: 198 DSSSLRRGLPVAHNIFGVAQTINSANYIYFRALQEVQRLKNPKAITIFAEELVHLHRGQG 257
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L E+ + + + ++ +G+ F
Sbjct: 258 MDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLGIKLMQAESRSLTDCVELVNLMGLIF 314
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD ++ + K + ED GK + P+I + + + + + +VE
Sbjct: 315 QIRDDYMNLSSKEYSDNKGMCEDLTEGKFSFPIIHSIR--SDPSNLQLINILAQKTNNVE 372
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ A M + T+ +A+ +++ + +
Sbjct: 373 VKRFAVARMESTGSFEYTKQVVGVLIDRARKAVQDIDEG 411
>gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
Length = 263
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 7/206 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + +A AIEF
Sbjct: 13 EVNKLLPE--NSENKLIS-AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +D+S RR +++ + T+VL GD LL+ AF ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEI 129
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L G + +L +D + KTA LF+A+ E+ ++I G + R
Sbjct: 130 IKVLSQAIGIRGMVGGQALD--IDTDFNKIKEIHLMKTAKLFAASCEIGAIIGGATDEQR 187
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGE 217
+AL ++G+NLG+ FQ DD+ DY +
Sbjct: 188 RALYNFGINLGLIFQAKDDIEDYEQD 213
>gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 340
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 79/326 (24%), Positives = 128/326 (39%), Gaps = 22/326 (6%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALML---E 58
+ V ++ I + + + Y GGK LRP L LA A + +
Sbjct: 19 DAVEPVLRAAIDTLPGRLRTIAAYHFGWEDAEGAAVDGIGGKLLRPGLVLAAAAAVGGEK 78
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E H TLLHDDV+D RR + A V+G + ++L GD +L+ A
Sbjct: 79 VADSPVLAAAAAVELAHNFTLLHDDVIDRDQTRRHRPTAWTVFGAENAILAGDAMLALAL 138
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+V + E + + +G+ + DVT ++ L + KT L A
Sbjct: 139 RLVGGEAASRLAECVIEIC----DGQYEDCAFELRDDVTLDECLAMAGKKTGALLGCACA 194
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ L AL +G LG+AFQL DD+L G+ GK +G D K +LPV
Sbjct: 195 LGGLAVRADPLTVAALDLFGRELGMAFQLTDDLLGIWGDPAVTGKPVGADLSARKKSLPV 254
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ A + + + +++A + A + KA L
Sbjct: 255 VAALSARSAAAGELARLYALGRDFTEHEVRRATDAVERAGGRAWAATEATARIAKAHAHL 314
Query: 299 RCLPDSSWKKS---LMEVVDFCLQRL 321
R P S + + L + + +R
Sbjct: 315 RRAP-SIEQTAVHDLHAIAELITRRS 339
>gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3]
gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3]
Length = 294
Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 121 TILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 425
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 113/314 (35%), Gaps = 30/314 (9%)
Query: 17 FLILKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
+ + + SD ++ + GGKR+RP L + L A+E
Sbjct: 56 ERMDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLGVALE 115
Query: 73 FIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQ 116
I + L+HDDV+D S LRRGK A +G +VL GD L+
Sbjct: 116 LIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAW 175
Query: 117 AFCMVIET--KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT----A 170
A V ET + + L E Q + +++ +
Sbjct: 176 ADDTVAETALSAVQRRRIGPLWRAMRTEMVAGQYLDLRGQVSGGSSVEQALRTACLKSAS 235
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + +AG + AL+S G GIAFQL DD+L G+ GK G+D R
Sbjct: 236 YSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSGDDIR 295
Query: 231 NGKPTLPVILAFQRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
GK T + +A + G ++ E+L + ++ A E +
Sbjct: 296 EGKSTYLLAVARRWAEAAGDERSLAVLGRVPGGGDLAEEDLAEVRGVLEATGARAHVERK 355
Query: 287 AYSYGQKAKDSLRC 300
A A L
Sbjct: 356 AERLRDHASRRLAQ 369
>gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
Length = 347
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I ++ GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKFEPKIISKFNQIKNT 283
Query: 262 ISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + K+ F ++ ++++ ++ A Y + K+ L P + +K L++ ++
Sbjct: 284 KTTKARKEIFKLTEMINSSKSIKNSTIVALKYLNEFKNELNLYPLTNRYKNLLIDTIEQI 343
>gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG]
gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
Length = 283
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 10/273 (3%)
Query: 14 KVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+N + +++ + V + + Y + +GGKRLRP+L L+ M + + A A+E
Sbjct: 11 AINHTLDEQLATVVNPHLRAAMAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALE 70
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
F+HT +L+HDD+ +D+ LRRG+ +G ++L GD LL+ AF ++ + +
Sbjct: 71 FVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPGKGA 130
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY----LHVIKSKTAVLFSAALEVSSLIAGV 186
E + ++A + + + + ++KT L A + + SL +
Sbjct: 131 ELVQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAI 190
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQ 243
+ + AL + G+ FQ+ DD+ D E+GK +D K T P + +
Sbjct: 191 PEADQAALADFAAAFGLGFQIKDDINDVTKTTAELGKTADKDVAEHKNTFPELLGLAGAK 250
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+ + + +N + +LK +++
Sbjct: 251 QALATQFQLATAALNSLTVDAADLKSILAVLQA 283
>gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
Length = 347
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I ++ GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGASAIHLIYGIDNSINAGNLIYFLPAKLIEKSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKFEPKIISKFNQIKNT 283
Query: 262 ISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + K+ F ++ ++++ ++ A Y + K+ L P + +K L++ ++
Sbjct: 284 KTTKARKEIFKLTEMINSSKSIKNSTIVALKYLNEFKNELNLYPLTNRYKNLLIDTIEQI 343
>gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1]
gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1]
Length = 293
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVAFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 323
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 15 VNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
V +++R+ + + + +++ + GGKRLRP L + TA ML +
Sbjct: 34 VETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLGGSEAAALA 93
Query: 67 LACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+E +H +L+H +DD +RRGK + T++LVGD L + AF
Sbjct: 94 AGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGDALQTLAFE 148
>gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587]
gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587]
Length = 294
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 121 TILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
Length = 320
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/317 (17%), Positives = 117/317 (36%), Gaps = 17/317 (5%)
Query: 17 FLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
IL R+ S+ + + + +YL+ + GK R L A L GD ++A
Sbjct: 5 DNILARLSSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDTLQIIAK 64
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIETKS 126
+ +H+A+L+ DD+ DDS LRRGK ++G ++ G+++ A+ + E
Sbjct: 65 IVNMLHSASLMVDDIEDDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYRELLLLREPAK 124
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+E L L ++ + ++ + + ++A
Sbjct: 125 GIDVEKLVTDELLSLHRGQGLELLWRDSLQCPTEDEYIDMVNNKTGGLLRIGIRLMMACS 184
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ +G+ FQ+ DD+++ + K ED GK + PV+
Sbjct: 185 TQNRDMNYIPLVNLIGVFFQIRDDLMNLQSVEYSSNKGFAEDLTEGKFSFPVVHGIH--A 242
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + ++ ++ T S ++ + + L +
Sbjct: 243 DMSNRQILNVLQKRPATPTLKIHTISYLKDRTKSFEYTFDVLDSLERQMRQEIDRLGGNP 302
Query: 306 WKKSLMEVVDFC-LQRL 321
SLM++VD + R
Sbjct: 303 ---SLMKIVDLLSVDRS 316
>gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 293
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLH 81
+ + ++Y + GGKR+RP L LA + + A A+E IHT +L+H
Sbjct: 34 PPRLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVH 91
>gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
Length = 293
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLH 81
+ + ++Y + GGKR+RP L LA + + A A+E IHT +L+H
Sbjct: 34 PPRLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVH 91
>gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
Length = 293
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + +E+ N + I + ++Y + +GGKR+RP+L LAT ML+++
Sbjct: 1 MNQSLNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLDHQK 60
Query: 62 -DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + +A A+E IHT +L+H +DD LRRGK V+G ++L GD LL++AF
Sbjct: 61 LESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLTKAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAV 171
+ T +A ++L+ + + S+N ++ E + KT
Sbjct: 121 EKIALTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESIHIHKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+E +++I ++ + Q L + +LG+ FQ+ DD+LD G ++GK +G D N
Sbjct: 181 LIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAKLGKPVGSDVTN 240
Query: 232 GKPTLP 237
K T
Sbjct: 241 HKSTYV 246
>gi|302697469|ref|XP_003038413.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8]
gi|300112110|gb|EFJ03511.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8]
Length = 228
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%)
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+ + + G +L A + E A+ Y +A++ L LP+S
Sbjct: 159 CAWKVNPKMGALVQRGLADEADLDMARDYVEEYDGRDRARDVAHDYAAQAREVLAALPES 218
Query: 305 SWKKSLMEVV 314
+ +L +
Sbjct: 219 GARTALETLT 228
>gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a]
gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1]
gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40]
Length = 347
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I ++ GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKFEPKIISKFNQIKNT 283
Query: 262 ISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + K+ F ++ ++++ ++ A Y + K+ L P + +K L++ ++
Sbjct: 284 KTTKARKEIFKLTEMINSSKSIKNSTIVALKYLNEFKNELNLYPLTNRYKNLLIDTIEQI 343
>gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
Length = 267
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + + + + + Y + SGGKR+RP+ T AT E AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 70 AIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ RRGK + + T++L GD L AF ++ +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNNT 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ L+ +L +QL L + + ++
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALF 175
>gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141]
Length = 293
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
Length = 809
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 129/332 (38%), Gaps = 56/332 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATA-L 55
+D + + V I + + D + D Y + GKRLRP+LT A
Sbjct: 516 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 575
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
+ V L ++E++HTA+L+ DD+ RRG+ V + T+ + G FL
Sbjct: 576 EYGLQASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 635
Query: 114 LSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ +A + + S SK ++ E V K
Sbjct: 636 IQKAIEEQSSLEGFDPKTVLKLIRYSSQRAGDMCSGQAMDLNSKGKALSLEQLNTVCYYK 695
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + F A+L + +++A V+ + LK + + GIAFQ+ DD+LD +G V ++GK G+D
Sbjct: 696 TGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQGNVEQLGKPGGQD 755
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N T I+ + A +
Sbjct: 756 AENNTSTF----------------------------------VSILGQEGA---SREMWD 778
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y Q A ++L+ +P ++ L ++++ + R
Sbjct: 779 HYCQ-AMEALQEMPRNTA--FLKHLLNYMVNR 807
>gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277]
gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277]
Length = 297
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 9/262 (3%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + + IE IH A+LLHDDV+DD+ RRG + +G + +V++GD L S+ F
Sbjct: 43 GESEQSLKICAIIELIHLASLLHDDVIDDADTRRGSPSINASFGTKNAVMLGDILYSKGF 102
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
S+ E ++ +++ + ++ +D
Sbjct: 103 ----YELSKFPYEIAGEISGAVSKLSVGEMMDVDLSAKFNDDKSAYETMIYYKTAVLIEA 158
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+++ A + K YG NLG+AFQ++DD+LD + +GK DF+ GK TLP
Sbjct: 159 AAAVGAMLAGLDASNFKIYGKNLGLAFQIIDDILDVTQDAATLGKPNFSDFKEGKTTLPY 218
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I ++ + +K K +S M E A+ + A + G++A S+
Sbjct: 219 IYLYESLNETDKEQLKGLFKK-DLSEAERGWVRANMNETGAIKKSIEAAKNLGEQAIKSV 277
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
L +V + R
Sbjct: 278 EKFN----VDGLESIVKSMIDR 295
>gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus]
Length = 361
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 69/308 (22%), Positives = 119/308 (38%), Gaps = 18/308 (5%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLAT---ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ Y + KRLRP L +A A A +E +HT L+HDDV D
Sbjct: 53 LTQARAYTL-RPAKRLRPALVMAGHCLARGSAVVPSGLWRFAAGLELLHTFLLIHDDVAD 111
Query: 87 DSALRRGKVAARLVWGNQTS-----VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
+ LRRG + + V+VGD L ++A +++ + +
Sbjct: 112 QAELRRGAPPLHRMLAPGRAGEDLAVVVGDHLFARALEVMLGSGLTCVAGVVQYYLGVSG 171
Query: 142 EGELRQLSLSKNLDVT------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
Q + F A L ++++ G + + + L+
Sbjct: 172 HTAAGQYLDLDLGRAPLAEVTLFQTLRVAHLKTARYGFCAPLVCAAMLGGASSGLVEELE 231
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G ++G+A+QL DD+L G+ N GK DF GK T PV+ AF R T+ E+ ++
Sbjct: 232 RVGRHVGLAYQLRDDLLGLFGDSNVAGKAADGDFLQGKRTFPVLAAFARATEAERTELEA 291
Query: 256 TINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLME 312
+ L +A ++ E + A+ SL+ LP+ + ++ L
Sbjct: 292 LWALPVEQKDAAALARARALVESCGGRAACERMVVRASRAARRSLQSLPNPNGVRELLDA 351
Query: 313 VVDFCLQR 320
++ R
Sbjct: 352 LIARLAHR 359
>gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80]
gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52]
gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395]
gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2]
gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757]
gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80]
gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52]
gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395]
gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2]
gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395]
gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757]
Length = 294
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 121 TILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 296
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/313 (21%), Positives = 106/313 (33%), Gaps = 55/313 (17%)
Query: 16 NFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+I K + + + + V Y + +GGKRLRP+ +L G+ A+E
Sbjct: 15 EAVIEKYLPEEHGFSGRMAEAVNYSMRAGGKRLRPVFMREAYQILGGEGEIIEPFMAALE 74
Query: 73 FIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HT +L+HDD+ D+ RRGK +V+G ++L GD LL+ A+
Sbjct: 75 MVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILAGDALLNYAYETAFSAFDMAKD 134
Query: 131 EALSLVACT----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
EA + Q +N E L + +
Sbjct: 135 EAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLEKQLLDYIYENKTSALIEAALM 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ + L+ G +GIAFQ+ DD+LD E+GK IG D +N K T +
Sbjct: 195 VGGILAGATDIEKLEQIGSKIGIAFQIQDDILDVISSAEELGKPIGSDEKNNKTTYVTLE 254
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ +A LR
Sbjct: 255 --------------------------------------GIEKAGNEVQKLTDEAVGLLRE 276
Query: 301 LPDSSWKKSLMEV 313
L + K L E+
Sbjct: 277 L--TDEKSFLEEL 287
>gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
Length = 267
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + + + + + Y + SGGKR+RP+ T AT E AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 70 AIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ RRGK + + T++L GD L AF ++ +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNNT 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ L+ +L +QL L + + ++
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALF 175
>gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C]
gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C]
Length = 290
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 9/264 (3%)
Query: 47 PMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
P L L +A L + V A A+E H TLLHDD++D RRG+ A V+G
Sbjct: 10 PALVLVSARALGAPAEAVRGAVRAAAAVELAHNFTLLHDDIIDRDVRRRGRPTAWTVFGT 69
Query: 104 QTSVLVGDFLLSQAFC---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
++L GD +++ A S A L+ L EG+ + + V+ ++
Sbjct: 70 PHAILAGDAMMALALRLLAEDPHPASARASARLAACVVELCEGQQADCAFEERAHVSLDE 129
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
L + +KT L A + +L AG +A+ ++G G+AFQL+DD++ G+
Sbjct: 130 CLTMAAAKTGALLGCACALGALYAGAGPEEVEAVDAFGREAGLAFQLIDDLIGIWGDPGH 189
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK G D K +LPV+ A GT+ + + G + +++ +A +
Sbjct: 190 TGKPAGADLLARKKSLPVVAALTSGTEA--GEELALLYAGPLKEDDVSRAARAVERAGGR 247
Query: 281 VDTEYRAYSYGQKAKDSLR-CLPD 303
+ A +A L +PD
Sbjct: 248 DWAQAHAADRMGRAVQELSRAVPD 271
>gi|121701357|ref|XP_001268943.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
gi|119397086|gb|EAW07517.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
Length = 372
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 108/302 (35%), Gaps = 14/302 (4%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ Y+ GK +R L A + L+ D+ ++ + +HTA+LL DDV D
Sbjct: 65 EKILMGPYDYMQQHPGKDIRRQLINAFNVWLQVPPDSLAIITKVVGMLHTASLLIDDVED 124
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A ++G ++ +++ A V + + A++ L G+
Sbjct: 125 NSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIYVQELLNLHRGQGM 184
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
L L E+ + ++ + +++ + +G+ FQ
Sbjct: 185 DLFWRDTLTCPTEEEYLEMVGNKTGGL---FRLAIKLMQAESTAGKDCVKLVNVMGLTFQ 241
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ K + ED GK + P+I + + + + E
Sbjct: 242 ICDDYLNLSSTTYTKNKGLCEDLTEGKFSFPIIHSIRS--NPRNHQLIGILKQRTKDEEV 299
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--------PDSSWKKSL-MEVVDFC 317
A M + T KA + + P+ + ++ ++
Sbjct: 300 KLYAVSYMESTGSFAYTREVVRELRDKAVSLIDEIEAQGVGNEPEGQDQGAMVRAILHKI 359
Query: 318 LQ 319
+
Sbjct: 360 TE 361
>gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
NAS-14.1]
gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
NAS-14.1]
Length = 301
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 48/312 (15%)
Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77
IL + + + ++Y + +GGK LR L + +A + A AIE +H
Sbjct: 31 QILHGLGGLDGTVAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAY 89
Query: 78 TLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-----MVIETKSQEAL 130
+L+HDD+ LRRG+ + W T+VL GD L + AF + + +
Sbjct: 90 SLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDAERVALV 149
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L+ A + + ++ + + + ++ +
Sbjct: 150 TGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAGDD 209
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
AL+SY NLG+AFQ+ DD+LD G+ +GK +G+D GK T +L
Sbjct: 210 AAALRSYARNLGLAFQIADDILDVEGDAATVGKAVGKDADAGKATFVSLL---------- 259
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
L RA A D+L P S ++L
Sbjct: 260 ----------------------------GLDPARARARDLVDAACDALS--PYGSDAETL 289
Query: 311 MEVVDFCLQRLN 322
+ F + R +
Sbjct: 290 RDAARFVIARKS 301
>gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
Length = 347
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 118/300 (39%), Gaps = 10/300 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84
+ I ++ GGKR+RPM+ + A L + N L+ +E H+ +L+ DD+
Sbjct: 44 DYIKAPAIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDI 103
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLA 141
D+S RRG+ A L++G S+ G+ + ++ ++Q+ L +
Sbjct: 104 EDNSLKRRGESAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSN 163
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + + + + I S S L A + N+ +A K Y L
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
+ + GK G+D GK +LP+I Q K K
Sbjct: 224 KLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKFEPKIISKFNKIKNT 283
Query: 262 ISVENLKKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
+ + K+ F ++ ++++ ++ A Y + K+ L P + +K L++ ++
Sbjct: 284 KTTKARKEIFKLTEMINSSKSIKNSTIVALKYLNEFKNELNLYPLTNRYKNLLIDTIEQI 343
>gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
Length = 358
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 5/276 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ YL+ GK +R L A L+ D+ ++ + +HT++LL DDV D S
Sbjct: 54 ILMGPYDYLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSSLLIDDVEDSS 113
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
ALRRG A ++G ++ +++ A + + + A++ L Q
Sbjct: 114 ALRRGIPVAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYV---KELLNLHRGQG 170
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
D ++ + ++ + S LG+ FQ+
Sbjct: 171 MELFWRDTLTCPTEDEYLQMVGNKTGGLFRLAVKLMQAESKTGKDCVSLVNVLGLIFQIC 230
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD L+ K ED GK + P+I + Q + + S + E
Sbjct: 231 DDYLNLANTTYAESKGFCEDLTEGKFSFPIIHSIQS--NPQNHQLLSILKQRTTVEEVKM 288
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
A M + V T+ KA + + + +S
Sbjct: 289 YAISYMESTGSFVYTQNVVRELRDKALNLIDEIDNS 324
>gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
Length = 299
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 11/277 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L++ K + +N + + + + D + Y + +GGKR+RPM+ + +
Sbjct: 4 SELDNFQAKFLPLLNERMDVYLQQLDTRKTLHDSMSYSVDAGGKRIRPMIIMLVCDSFKK 63
Query: 60 RGD-NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ D + + + ++EF+HT +L+HDD+ +D+ LRRGK +V+G ++L GD LL+
Sbjct: 64 KIDQDVLDVCASLEFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILAGDGLLTT 123
Query: 117 AFCMVIETKSQEALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
AF + +T + + ++ + +T +V KT
Sbjct: 124 AFECLGQTSISAKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQLRNVHAQKTG 183
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L A E ++AGV + LK G G+AFQ+ DD++D EMGK +D
Sbjct: 184 ALLRYAFESGGILAGVSDRALGELKELGNCFGLAFQIYDDIMDVVSTPEEMGKATHKDQS 243
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
K T P +L + + + ++ E
Sbjct: 244 EHKNTYPGLLGLDGAYEELEKAKANAKTHMEVLAEEF 280
>gi|195495712|ref|XP_002095383.1| GE19723 [Drosophila yakuba]
gi|194181484|gb|EDW95095.1| GE19723 [Drosophila yakuba]
Length = 446
Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 84 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 137
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 138 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYD 197
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 198 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 257
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 258 YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLK 317
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 318 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVSAPVLFHLEHDPGM 377
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 378 YSQLEAGKQSVDNIDYDKIHKAILAGPALTKTKELQRKHTAAALSVLQHFPATDARQALE 437
Query: 312 EVV 314
++
Sbjct: 438 NII 440
>gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2]
gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51]
gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385]
gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51]
gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2]
gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385]
gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
Length = 294
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L+ L EE
Sbjct: 121 TILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1]
gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1]
Length = 303
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/338 (20%), Positives = 118/338 (34%), Gaps = 58/338 (17%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS--------DVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ LE + ++ ++ + + + +++ GGKRLRP+L + T
Sbjct: 5 ERLEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMVET 64
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A + D A A+E IH +L+H +DD LRRG+ + T++L GD
Sbjct: 65 ARLFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILAGD 124
Query: 112 FLLSQAFCMVIETKSQEALEAL--------SLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF ++ E G +++ +E +
Sbjct: 125 ALLTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEIRT 184
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
+ KT L A +++A + +G +G+AFQL DD+LD + + +GK
Sbjct: 185 LQAMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLEAQADAVGK 244
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G+D GK TL + T
Sbjct: 245 ATGKDAAAGKATLVALY--------------------------------------GPQQT 266
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+AK L D + L ++ F +R
Sbjct: 267 RVILADLSAEAKALLAS--DGARGDLLSQLAAFVAERQ 302
>gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
Length = 289
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 121/319 (37%), Gaps = 50/319 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+V + + ++ + ++Y + GGKRLR L L +A + + V A +I
Sbjct: 12 ARVQGRLDAALADREDLPVVHAMRYAVQ-GGKRLRGFLVLESARLHGIAPEAAVSAAASI 70
Query: 72 EFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E +H +L+H +DD LRRG W T+VL GD L + AF ++ + A
Sbjct: 71 EALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPA 130
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ LVA + L + LD+ + + + +
Sbjct: 131 AVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAG 190
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + + R L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L
Sbjct: 191 AILGQADRVPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLL--- 247
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + RA + + A+ +L P
Sbjct: 248 -----------------------------------GLDGAKARARALVEDAEAALA--PY 270
Query: 304 SSWKKSLMEVVDFCLQRLN 322
+L+E F + R +
Sbjct: 271 GPEAGTLIEAARFVISRES 289
>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
Length = 296
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 12 MEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLA 68
+ V IL + + + D + Y + +GGKR+RP+L LA + D +A
Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++
Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAH 129
>gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40]
gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae]
gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
Length = 389
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 108/296 (36%), Gaps = 14/296 (4%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRR
Sbjct: 88 PYDYMLQHPGKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTASLLIDDVEDCSILRR 147
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ A V + + A++ L G+ L
Sbjct: 148 GAPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRD 207
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L E+ + ++ + +++ + S LG+ FQ+ DD L
Sbjct: 208 TLTCPSEEEYLEMVGNKTGGL---FRLAIKLMQAESATGKDCVSLVNVLGLIFQICDDYL 264
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ K + ED GK + P+I + + + + + + E A
Sbjct: 265 NLSNTTYTKNKGLCEDLTEGKFSFPIIHSIR--SDPSNHQLINILKQKTKDEEVKLYAVK 322
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS---------WKKSLMEVVDFCLQ 319
M + T+ +A + + + + ++ ++D +
Sbjct: 323 YMESTGSFTHTQNVVRDLRDRALTLIAEIEANDNSKEPEGHGNRVTMRAILDKITE 378
>gi|322802276|gb|EFZ22672.1| hypothetical protein SINV_06205 [Solenopsis invicta]
Length = 917
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/340 (15%), Positives = 119/340 (35%), Gaps = 39/340 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR-----PMLTLATALML 57
L L ++ V + K + S+ ++ K +I++G R ++ L +
Sbjct: 73 SLRWLLSDEIANVALHLRKLVGSNHPVLKTA-KSIIYNG----RNTQAFGLILLLISKAA 127
Query: 58 EYRGDNHVL-------------LACAIEFIHTATLLHDDVVDDSA----LRRGKVAARLV 100
+ + LA E I T+ L+H +V+ + +
Sbjct: 128 GHLNAKPIEEDKAAGVLHSQRALAEITEMIRTSNLIHRGLVNINTKDTGSLESSELNNIT 187
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GN+ ++L GD+LLS + + K+Q+ L +S L + E ++N +
Sbjct: 188 FGNKIALLCGDYLLSNSCTEMAALKNQDLLLLISAAVRDLCQAEFVSRRDNQNFPIP--- 244
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--- 217
I + ++ G + + ++ +S G + ++ + ++
Sbjct: 245 ---SIPPEDRTGYALREWTLLNTYGAGSLLGKSCQSTLKIAGHSKEIEEKGYEFGKHLAL 301
Query: 218 -VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIM 274
++ + + A ++ G SVEN+ K I+
Sbjct: 302 AWQASLDLGLCINKDKEILQNLCAAPIMFHVEHDPSILVELDKGLESVENVDYLKVLEIV 361
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ T+ + QKA + L +S +K+L ++
Sbjct: 362 AAGPGIGLTKELVKQHSQKAMEILSVFKESDARKALSNII 401
>gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33]
gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10]
gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33]
gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10]
gi|255737712|gb|EET93106.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
Length = 294
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/334 (20%), Positives = 121/334 (36%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ E A E + + + +I +
Sbjct: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 179 VSSLIA----------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
Length = 271
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 65/325 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYR 60
+ + +L + K + + I + ++Y ++ KRLRP+L L T M
Sbjct: 6 QEIINLINTSL--------KELKFSDDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNES 57
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE IH +L+HDD +D+ RRGK+ +G +VLVGD LL+ +F
Sbjct: 58 ITESLNYALAIELIHNYSLVHDDLECMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYSF 117
Query: 119 CM--VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +A A +V + G ++ L + +++E++ + + KT L A+
Sbjct: 118 EVLSESIKNEFDAKCANYIVKKSGCFGMIKGQLLDIDSEISEKNIIEIYDKKTCNLLKAS 177
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ V ++ L+ Y NLG+AFQ++DD++DY ++
Sbjct: 178 TVSAGILSRVGDNTLLKLEDYAFNLGMAFQIIDDIMDYENDLKINKNTY----------- 226
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I+ + + + D A Y Q+A +
Sbjct: 227 ----------------------------------VTILGKEKGIDD----ANKYSQRAIE 248
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + +S + L+E+ + L R
Sbjct: 249 CIKDIDNS---QPLIELTNKLLGRK 270
>gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
Length = 290
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/315 (20%), Positives = 123/315 (39%), Gaps = 53/315 (16%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
++ + K + S D + Y++ +GGKR RP+L L+ + + +
Sbjct: 4 LQLFEDHLQKNLPHVQSFHPFYTDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDV 63
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---- 121
A AIE HT +L+HDD V+DD+ LRRGK + T+VLVGD L + AF +
Sbjct: 64 AMAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIAKSA 123
Query: 122 --IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+T+++ +N ++ E + +KTA L +A+L++
Sbjct: 124 LSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASLQM 183
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++I + + L ++G++LG+ FQ+ DD++D E G
Sbjct: 184 GAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIIDKVATSEEAG----------------- 226
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ E+ ++ L A ++ D +
Sbjct: 227 -------------------KTTQNDEDKNSFVNLL----GLKKANEEADQLAKRLHDEIE 263
Query: 300 CLPDSSWKKSLMEVV 314
D ++L ++
Sbjct: 264 QF-DQDISQTLQSIL 277
>gi|119499223|ref|XP_001266369.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119414533|gb|EAW24472.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 545
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/304 (18%), Positives = 107/304 (35%), Gaps = 11/304 (3%)
Query: 8 TLKDM---EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
K++ +V + + D V Y+ K +R + A + +
Sbjct: 221 VRKEIIIPNRVEEA--SSVALGNSALLDPVHYIQSLPSKNMRSKVVDALNIWFQLPHHLV 278
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---V 121
+ ++ +H +TL+ DD+ D S LRRG A V+G+ + +L++QA
Sbjct: 279 DTVKGTVDDLHNSTLILDDIQDSSYLRRGFAATHHVFGSAQCINSATYLVAQAASRLIVH 338
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
E L + S + E+Y+ ++ KT V+F + +
Sbjct: 339 NEQYPALITFFLDGLKELALGQSWDLNWKSTGYCPSTEEYMAMVDGKTGVMFDMIIRMMH 398
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ Q L LG +Q+ DD + + E K + ED GK + P+ +
Sbjct: 399 CFSSSQTVPVPELSQLTKLLGRWYQVRDDYQNLQDEQYTAQKGLCEDLDEGKLSYPLTVC 458
Query: 242 FQRGTKREKNFWKSTINDGKISVENLK---KAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
++ + + ++R + AL T + ++A +L
Sbjct: 459 CNTDPTAQRIIMGILRQRLPGTPLQFNVKMQILDLIRRSGALQQTWELLQKFKKQADAAL 518
Query: 299 RCLP 302
L
Sbjct: 519 SNLE 522
>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
Length = 296
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 12 MEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLA 68
+ V IL + + + D + Y + +GGKR+RP+L LA + D +A
Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++
Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAH 129
>gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 267
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + + + + + Y + SGGKR+RP+ T AT E AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 70 AIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ RRGK + + T++L GD L AF ++ +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNNT 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ L+ +L +QL L + + ++
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALF 175
>gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 386
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/387 (17%), Positives = 125/387 (32%), Gaps = 66/387 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILK----------RICSDVEMIPDVVKYLIFSGGKRLRPML- 49
M L + V + + + + + GGKR+R +L
Sbjct: 1 MSALPAALSRVRPAVEHRLEEVLAGCHRRWEELEQAAPELLKAA-DSVLGGGKRMRAVLG 59
Query: 50 ----TLATA---LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
T+ +A E G + V L A+E + L+HDD++D ++ RRG AA +
Sbjct: 60 AVGCTILSAPEHRNKELTGASAVHLGAALELYQASALVHDDLMDGASTRRGLPAAHHAFA 119
Query: 103 NQTSVL----------------------------VGDFLLSQAFCMVIETKSQEALEALS 134
+ + + + A A
Sbjct: 120 WEHETRGWLGHSRAFGSNGAILLGDLLLSLAGEEMSALAQAHTSSGCGDEAVGHARAAFD 179
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN------ 188
+ +A G+ + +D + S S+ +
Sbjct: 180 AMTTEVALGQYLDVRSENLPLPWGQDPAAAAQRMRDDALSVVRHKSARYSVRHPLLIGAL 239
Query: 189 --------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ L +G +GIAFQL DD L G GK G+D R GK T+ + L
Sbjct: 240 LAGMAPSSPTAKHLAEFGEEIGIAFQLRDDELGVFGSPRVTGKPAGDDLREGKRTVLLAL 299
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
A+ R + S + + + + + +A ++ + A E ++ +L
Sbjct: 300 AWGRCDDTGRKLLGSVLANTETTSNQIAEASALIEDCGARAVHEEIIATHRDAGVRALGR 359
Query: 301 LPD-----SSWKKSLMEVVDFCLQRLN 322
L D ++ + L+E+ D R +
Sbjct: 360 LRDEGVVSTASLEDLVELADLLTHRDS 386
>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
Length = 294
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEY 59
M+ ++ L ++E V L+ SD + + D + Y I +GGKR+RP+L AT A +
Sbjct: 1 MQQFQEKYLSEIEAVIVRFLEEHTSD-QTLKDSMLYSIHAGGKRIRPLLLTATVASFHKS 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E IHT +L+HDD+ LRRGK V+G ++L GD LL+ A
Sbjct: 60 MTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAA 119
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + + L L + G +N +T ++ + + + KT
Sbjct: 120 FQLLSLADLEPDKKILLLQQLSHTAGTAGMVAGQAADIQGENQQLTLDELISIHERKTGE 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+ ++A V Q L + ++G+AFQ+ DD+LD +GK + D
Sbjct: 180 LIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTSTTEVLGKIVHRDDAL 239
Query: 232 GKPTLP 237
K T P
Sbjct: 240 AKSTYP 245
>gi|325067553|ref|ZP_08126226.1| geranylgeranyl pyrophosphate synthase [Actinomyces oris K20]
Length = 76
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + +
Sbjct: 11 ELESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDP 67
>gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 366
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 72/356 (20%), Positives = 111/356 (31%), Gaps = 60/356 (16%)
Query: 11 DMEKVNFLILKRICSDVEM--------------IPDVVKYLIFSGGKRLRPMLTLATALM 56
D+ V + + + + + + GGKR+RP L LA
Sbjct: 13 DLAAVEAHLDGALAERAALTSDGGAAVGSWWRAVREACR-----GGKRVRPALVLAAFHG 67
Query: 57 L-----------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR-------------- 91
L + G V +A A E +H A LLHDDV+D +R
Sbjct: 68 LRDDAGPGHEEGDPDGGAAVQVAAAFELLHAAFLLHDDVIDGDLVRRGRPNLIAELAEAA 127
Query: 92 ----------RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
A V + ++ A + L LV
Sbjct: 128 HTDGVGSSPAHEWGTAAAVLAGDVLIHAALHAVATADVPAEPRRELLELVDRCLVRTVAG 187
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
E + + + A A L +++AG R AL G +
Sbjct: 188 EVADVAYAARVEVPRLPDVLRMTSWKTAAYSCEAPLVAGAILAGAAPGARAALADVGRAV 247
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G A+QL DDVL G+ GK+ D R GK T V A E + + G
Sbjct: 248 GAAYQLRDDVLGTFGDELVTGKSTSSDLRGGKVTALVAYARHTDHAAELDALLALPAPG- 306
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVD 315
++ ++ + AL E + A ++L LP ++ L V
Sbjct: 307 --AAEIEAMRTVLVRSGALDLVEQLIDDLLRSALEALAGAELPP-ELREYLGSVAR 359
>gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 794
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 129/332 (38%), Gaps = 56/332 (16%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATA-L 55
+D + + V I + + D + D Y + GKRLRP+LT A
Sbjct: 501 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 560
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
+ V L ++E++HTA+L+ DD+ RRG+ V + T+ + G FL
Sbjct: 561 EYGLQATAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 620
Query: 114 LSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ +A + + S SK ++ E V K
Sbjct: 621 IQKAIEEQSSLEGFDPKTVLKLIRYSSQRAGDMCSGQAMDLNSKGKALSLEQLNTVCYYK 680
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + F A+L + +++A V+ + LK + + GIAFQ+ DD+LD +G V ++GK G+D
Sbjct: 681 TGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQGNVEQLGKPGGQD 740
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N T I+ + A +
Sbjct: 741 AENNTSTF----------------------------------VSILGQEGA---SREMWD 763
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
Y Q A ++L+ +P ++ L ++++ + R
Sbjct: 764 HYCQ-AMEALQEMPRNTA--FLKHLLNYMVNR 792
>gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 386
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 129/334 (38%), Gaps = 51/334 (15%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
GGK LRP L++A L L + D + A +E H A L+HDD+ D+S RRGK
Sbjct: 52 RRGGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMH 111
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLVACTLAEGELRQLS 149
+ G +V VGD +LS + +++ + A + +
Sbjct: 112 IDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWV 171
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLV 208
S + + DYL +++ KT+ + IA + R + L+S G +LG AFQ+
Sbjct: 172 RSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRHLGAAFQIT 231
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK------- 261
DD+L+ R + E GK IG D GK TL ++ + +++ + +
Sbjct: 232 DDLLNLRADPEEYGKEIGGDLWEGKRTLMLLHTLRTAQPQDRIRALQILARRRPAGLEAG 291
Query: 262 -------------------------------ISVENLKKAFIIMRENRALVDTEYR---A 287
S+++++ + +M + +L
Sbjct: 292 LAGLLDRLTARGELSPTGRAEIAARFDTAEAKSLDDIQWLYELMHDVGSLGHAREVAARH 351
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L P S +++L +VD+ R
Sbjct: 352 AQQAAAVLAGLDWFPPSRHREALTHLVDYVHGRT 385
>gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
Length = 288
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 137/322 (42%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+E++N + + I S + + + Y + +GGKR+RP+L L T ML+ D V A
Sbjct: 5 IEQINTKLNQSIQNSSLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQSAL 64
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+H +DD RRGK+ V+G ++L GD LL++AF +V +
Sbjct: 65 ALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDELI 124
Query: 128 EALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + LV + S+N V + K+KT L + A+ +
Sbjct: 125 EDKVKVKLVQRLSKASGHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTFAVMAA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA V L+ + +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 VDIAQVDQETSDHLEKFSQHLGLMFQIKDDLLDVYGDEEKLGKAVGSDETNHKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + A E + + ++A L C
Sbjct: 241 ------------------------------VSLLGKEGA----EDKLDYHMKQALYCLDC 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
LP L E+VD R +
Sbjct: 267 LPSQFDTAQLKEIVDLFYNRDH 288
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
+ + V + + + ++ + + GKRLRP+L L +
Sbjct: 18 DFRRRLHERQQLVARALDEHFPPGAGHLTAAIREALLADGKRLRPILCLEACEWVGGSVK 77
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ ACA+E IH TL+HDD+ R G+ A V G ++L GD LL AF
Sbjct: 78 AALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLVHAF 135
>gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 386
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 74/334 (22%), Positives = 129/334 (38%), Gaps = 51/334 (15%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
GGK LRP L++A L L + D + A +E H A L+HDD+ D+S RRGK
Sbjct: 52 RRGGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMH 111
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLVACTLAEGELRQLS 149
+ G +V VGD +LS + +++ + A + +
Sbjct: 112 IDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWV 171
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLV 208
S + + DYL +++ KT+ + IA + R + L+S G +LG AFQ+
Sbjct: 172 RSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRHLGAAFQIT 231
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK------- 261
DD+L+ R + E GK IG D GK TL ++ + +++ + +
Sbjct: 232 DDLLNLRADPEEYGKEIGGDLWEGKRTLMLLHTLRTAQPQDRIRALQILARRRPAGLEAG 291
Query: 262 -------------------------------ISVENLKKAFIIMRENRALVDTEYR---A 287
S+++++ + +M + +L
Sbjct: 292 LAGLLDRLTARGELSPTGRAEIAARFDTAEAKSLDDIQWLYELMHDVGSLGHAREVAARH 351
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
L P S +++L +VD+ R
Sbjct: 352 AQQAAAVLAGLDWFPPSRHREALTHLVDYVHGRT 385
>gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
Length = 267
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + + + + + Y + SGGKR+RP+ T AT E AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
AIE +H +L+HDD+ +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCH 99
>gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
Length = 294
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L+ L EE
Sbjct: 121 TILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLDGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|83773087|dbj|BAE63215.1| unnamed protein product [Aspergillus oryzae]
Length = 303
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 7/277 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+I V YL+ GK +R L A L D ++A + +HTA+LL DD+ D S
Sbjct: 10 IIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQDSS 69
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G ++ ++ A + E +A E + L G+ L
Sbjct: 70 KLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQGMDL 129
Query: 149 SLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ TEE+Y+ +I +KT LF A+++ +++ V LGI FQ+
Sbjct: 130 YWRDSLTCPTEEEYIEMISNKTGGLFRLAIKL----MQLESEVTSDFLGLVDLLGIIFQI 185
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
DD + + ++ K ED GK + +I + ++ + SV
Sbjct: 186 RDDYQNLQSDLYSKNKGFCEDLTEGKFSFLIIHSINSNLGNQQLLNILRQRSEEESV--K 243
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K A +R + + R S +AK + L ++
Sbjct: 244 KYAVEYIRSTGSFAYCQDRLASLLHEAKMMVNVLEEN 280
>gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
IFM 10152]
Length = 369
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/344 (19%), Positives = 120/344 (34%), Gaps = 27/344 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ L D V + + + + ++ V+ + +GGK LR L LA +
Sbjct: 29 MRDDTARVLDDF--VRARRREHLGAPETAVLGQVIGDFV-AGGKYLRSALHLAGWSTVAP 85
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-----VGDFLL 114
G + A + E +H L+ DDV+D+SA RRG+ AA + + + F
Sbjct: 86 VGAAAIRAAASAELLHCFALMQDDVMDESARRRGRPAAHVRFAQWHARQGFSGSSDRFGE 145
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
S A A + ++ + ++
Sbjct: 146 SAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRSELAVGQFRDLVNDARRRPAL 205
Query: 175 AALEVSSLIAGVQNSVRQALK-----------------SYGMNLGIAFQLVDDVLDYRGE 217
A + + +VR+ L+ YG+ +G AFQ+ DD+L G+
Sbjct: 206 ADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRYGVAIGEAFQVRDDLLGVFGD 265
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
GK +G D RNGK T V+LA + + ++ E + + ++ E
Sbjct: 266 PGATGKPVGADLRNGKATTVVVLAREYADGVTRRELARLAALPELGAEEIARYVRVIAET 325
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A E ++ ++ L + L + C R
Sbjct: 326 GAPRRLELLIAHRLREGLAAIAGLEPG-ARAVLTHLAHACTDRS 368
>gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
Length = 282
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 54/327 (16%)
Query: 1 MKMLEDLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M++ KD++K + ++ K ++ I D+++Y + GGKR+RP + A + +
Sbjct: 1 MEIYLQNIRKDIDKSIRKVLKKH--KSIKEIDDMLEYGVLLGGKRIRPSIMYILANVYKK 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A +IE IH +L+HDD +D+ RRG + +G +VLVGD LL+ A
Sbjct: 59 DKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNLTVHKKYGEANAVLVGDALLTLA 118
Query: 118 F----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
F K + + G+ L D+ ++ + + +KTA+L
Sbjct: 119 FSVLAESEYSNKYSIVALSYYSGHKGMILGQYLDLLNENKADINFDELMEIHLNKTAMLL 178
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A++E++++ + R AL+ Y + LG+A+Q+ DD+L+ ++GK
Sbjct: 179 MASVEIAAISLSINTEARNALRKYILYLGLAYQIQDDILEMESSFEKIGKENT------- 231
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
D K + K L ++ +
Sbjct: 232 -------------------------DEKNNKSTFPKIL-------GLEKSKILKEKFTND 259
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + ++ + L++ + L R
Sbjct: 260 AIEIVKG------NQKLIDFAYYLLNR 280
>gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 263
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + +A AIEF
Sbjct: 13 EVNRLLPE--NSENKLIS-AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+H +L+HDD +D+S RR +++ + T+VL GD LL+ AF ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEI 129
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L G + +L + + KTA LF+A+ E+ ++I + R
Sbjct: 130 IKVLSQAIGIRGMVGGQALD--IGADFNKIKEIHLMKTAKLFAASCEIGAIIGNAIDKQR 187
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGE 217
+AL +YG+NLG+ FQ DD+ DY +
Sbjct: 188 KALYNYGINLGLIFQAKDDIEDYEQD 213
>gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493]
Length = 267
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 5/167 (2%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
E++N + + + + + + Y + SGGKR+RP+ T AT E AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 70 AIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H +L+HDD+ RRGK + + T++L GD L AF ++ K+
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKNI 128
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ L+ +L +QL L + + ++
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALF 175
>gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03]
Length = 450
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + K+++ + I + + S ++ + KY S GK +RP+L L +
Sbjct: 114 IDPLR-IVGKELKFMKKNIQQLLGSGHPLLDRIAKYYTRSEGKHVRPLLVLLMSQATAIA 172
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + E + ++ D+
Sbjct: 173 PKSPRQVQSVSESGINEAITSPAILADTN 201
>gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
Length = 338
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 15/318 (4%)
Query: 18 LILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + VV Y GGK +RP L L +A + +
Sbjct: 19 ALRAAVDRLHPRLRRVVAYHRGWTDAEGTPLPGGGGKLVRPALALLSAEAAGAAVEVGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A V+G ++L GD LL A +++E +
Sbjct: 79 GAVAVELVHDFSLLHDDLMDGDTERRHRPTAWTVFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG- 185
+ A ++ + + Q + + + + +++ A
Sbjct: 139 EPGRRAAIMLGAGVQDLVRGQAEDLYFETRNDVTVADTLTMEDGKTGALLSCSAAIGAVL 198
Query: 186 --VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + L +G LG AFQLVDD+L G+ GK + D R+ K ++PV++A
Sbjct: 199 AGGRTELVDGLAEFGSRLGTAFQLVDDLLGIWGDPAVTGKPVLSDLRSRKKSVPVVVALD 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
G + G S L ++ T A + + L
Sbjct: 259 AGGADADELRTFLASSGDASESELHHIARLVERAGGREWTTAEADRQLDECAKLIASLSL 318
Query: 304 SSWKK-SLMEVVDFCLQR 320
+ L+ + F +R
Sbjct: 319 PPLVETELLALARFVTER 336
>gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
Length = 279
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 51/311 (16%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLLACAIEFIHTATL 79
I + +Y++ + GK+LR L TA ML N +A AIE +H+ +L
Sbjct: 8 SIPCPDPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHSYSL 67
Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+HDD+ +D+ LRRG+ + T++LVGD ++AF ++ S A + + L A
Sbjct: 68 VHDDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIARDSSLSAEQRVELFA 127
Query: 138 CTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +++ + + + KT L AA+ +++AG
Sbjct: 128 LLSQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGANRET 187
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L ++ MNLG+AFQ++DDVLD +++GK G+D +GK T L
Sbjct: 188 LDRLATFAMNLGLAFQVIDDVLDVTACSDDLGKTAGKDAISGKSTYVTCL---------- 237
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + A +A D+L +S+ +L
Sbjct: 238 ----------------------------GIDGAKAEAARLLNEAVDALEPFGESAL--AL 267
Query: 311 MEVVDFCLQRL 321
+V ++R
Sbjct: 268 RDVALSMVERS 278
>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
Length = 296
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLA 68
+ V IL + + D + Y + +GGKR+RP+L L + D +A
Sbjct: 11 LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++
Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAH 129
>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO]
gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
Length = 296
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLA 68
+ V IL + + D + Y + +GGKR+RP+L L + D +A
Sbjct: 11 LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++
Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAH 129
>gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis]
Length = 298
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 10 KDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
D+ +V + + + ++ + + GKR+RP+L + A + ++ + A
Sbjct: 20 DDLRLQVQARLAEVAPAHDGLLSTAAREALLGRGKRVRPVLAMLAAAHVGGDPEDALEYA 79
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
CA+E +H A+L+ DD+ LRRG+ G T+VL LL+QA
Sbjct: 80 CALEMVHAASLVLDDLPCMDDASLRRGQPTLHHRHGEDTAVLAAVALLNQATR 132
>gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2]
Length = 291
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 12/244 (4%)
Query: 14 KVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+VN + + S + + +KY + GKRLRP L A + D ACA
Sbjct: 11 RVNQKLKALLDQQTSYPASLLEAIKYATLNNGKRLRPALVYAVGESMNISLDKLDAAACA 70
Query: 71 IEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH+ +L+H +DD LRRG+ + + T++LVGD + AF + +
Sbjct: 71 VELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQQTLAFEALSQDAFLA 130
Query: 129 ALEAL-------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + G S + + KT L +A+L + +
Sbjct: 131 DSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMHEMKTGALITASLLMGA 190
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + L G +G+AFQ+ DD+LD G +GK G D K T P +L
Sbjct: 191 AQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIEGSTEVLGKPQGSDEAADKSTYPKLLG 250
Query: 242 FQRG 245
+
Sbjct: 251 VMQA 254
>gi|238062098|ref|ZP_04606807.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237883909|gb|EEP72737.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 384
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 99/316 (31%), Gaps = 31/316 (9%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSAL 90
+ + +GGKR+RP + + A+E +HT L+HDDV+D S
Sbjct: 69 ARDCVLAGGKRVRPTFAYWGWRGAAGGAEPLPAVLPALAALELLHTFALVHDDVMDASDT 128
Query: 91 RRGKVAARLVWGNQT-----------------------SVLVGDFLLSQAFCMVIETKSQ 127
RRG+ A + ++ D LL+ A
Sbjct: 129 RRGRPTAHRAAAARHAAAGHTGDPERFGEAVAVLIGDLCMVWADRLLAHATVPPARLLDV 188
Query: 128 EALEALSL--VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L + + V A
Sbjct: 189 RRCYDQMRVETVAGQYLDILGENDAGNWSLDRALRVARYKTASYTVQRPLLFGALLAGAD 248
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ A YG+ +G AFQL DD+L G+ GK G+D R GKPT ++LA Q
Sbjct: 249 ADAPLTAAYTRYGLAVGEAFQLRDDLLGVYGDPATTGKPAGDDLRTGKPTALLVLARQFA 308
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
T ++ + + + ++ + A+ E +A +L D
Sbjct: 309 TGTQRRALERAGT--VTGTREVARLAELVTDTGAVARVERMISDRVAEALAALDTASVDE 366
Query: 305 SWKKSLMEVVDFCLQR 320
+ +L + R
Sbjct: 367 TAHTALTGLATAATTR 382
>gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
PR4]
gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus
erythropolis PR4]
Length = 379
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 69/347 (19%), Positives = 132/347 (38%), Gaps = 40/347 (11%)
Query: 15 VNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLEYRG--- 61
+ S E++ ++ ++ + GGKR+RP L
Sbjct: 32 FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGN 103
+ + A+E + L+HDD++D S RRG +G
Sbjct: 92 DAEAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGE 151
Query: 104 QTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++L+GD L+ A M+ + S + + G+ +S D T
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + V + KTA L + + + G + A +++G ++GIAFQL DD+L G+
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMR 275
+ GK G+D GK T+ +A R + + N +++ + ++
Sbjct: 272 PSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDNEVDTLRQVIT 331
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRL 321
+ A+ D E + + + A ++L + K L ++ +R
Sbjct: 332 DLGAVTDVETQIDTLVEAAANALDSSTATTESKARLTDMAIAATKRS 378
>gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
Length = 295
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 125/333 (37%), Gaps = 53/333 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M E + +KV + + I + +++ + GKR+RP L T M
Sbjct: 1 MTNFEQRLTEVADKVTVALDQLIPPASGPEANLMRAMRHAALANGKRMRPFFVLETGAMF 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A A+E IH +L+HDD+ RRG+ + T+VL GD LL+
Sbjct: 61 GASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKS 167
AF ++ +++ + L+ LA+ + + + E+ + +
Sbjct: 121 LAFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRL 180
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L S ALE +I + + R AL + +LG+A+Q+ DD+LD G+ + +GK +
Sbjct: 181 KTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVS- 239
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D N + R
Sbjct: 240 ------------------------------KDKDAGKANFVTLL-------GVDGARQRV 262
Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+AK+ L D + L+ VD+ L R
Sbjct: 263 RLLAAQAKEHLAIFRDKAH--ILLHSVDYVLNR 293
>gi|239943138|ref|ZP_04695075.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 15998]
gi|239989596|ref|ZP_04710260.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 11379]
Length = 363
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 19/307 (6%)
Query: 7 LTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNH 64
L +++ ++ D+++ L GGKR R A ++
Sbjct: 26 LFQDYFKRLRQEFDAPKLSRFTPRSFDLLEDLSLRGGKRQRVAFMYEAARLVTSEPVPGI 85
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------------- 107
A +IE + T L+HDD++DD+ RRG + + +
Sbjct: 86 DEAALSIELLQTHLLVHDDIIDDAPTRRGGTSTYYSYKEEFPEQPQTALGLALLAGDLAA 145
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ +L +A + ++ + + A + + + L + K+
Sbjct: 146 FLSLRVLLEADLPLSLRQALVETQVTAGAATFVGQMYDLERDLPALPTEEMLHEVSDYKA 205
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + L+ Y + GI+ Q+ DD L G+ GK
Sbjct: 206 SRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQMCDDYLSLFGDEKVTGKPATA 265
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D R+G+ T + E+ +S + S +++ I R + +
Sbjct: 266 DVRDGRRTYAIRAILAAADASERERVESILGRQDASADDIDTIREIARRHGVDQQLRSQM 325
Query: 288 YSYGQKA 294
+ Y ++A
Sbjct: 326 HRYAEEA 332
>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
Length = 272
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 15/250 (6%)
Query: 2 KMLEDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
L + + + +++ + + Y + +GGKRLRP++ LA
Sbjct: 3 NKLTSFLADRKKTIENQLSVYTEKLDMPDS-LKKSMLYSLQAGGKRLRPLIVLAVLNAYG 61
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + + CA+E IHT +L+H +DD LRRGK V+G T+VL GD LL++
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 117 AFCMVIETKSQEALEALSLV---------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+F ++ S E L G + N VT E+ + +
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAGNRQVTLEELESIHER 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT+ L + +++A + L+++ ++GI FQ+ DD+LD G ++GK +G
Sbjct: 182 KTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 228 DFRNGKPTLP 237
D N K T P
Sbjct: 242 DTTNDKSTYP 251
>gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
Length = 375
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 69/323 (21%), Positives = 117/323 (36%), Gaps = 34/323 (10%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLHDDVVD 86
+ + + GGKR+RP + + ++E I L+HDD++D
Sbjct: 53 EALSGFVLGGGKRIRPTFAWWGWRGAGGAASGPLAEGALQAVASLELIQACALIHDDLID 112
Query: 87 DSALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQAFCMV--IETKSQE 128
S RRG+ V+G ++VLVGD L+ A M ++
Sbjct: 113 SSDSRRGRPTVHVAAEKLHAGRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAPLPAET 172
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS----KTAVLFSAALEVSSLIA 184
A E Q + V + ++ A L + + +A
Sbjct: 173 IAAARPAWRAMRTEVLAGQYLDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGASLA 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + L +G ++G+AFQL DD+L G+ + GK G+D R GK TL V L Q
Sbjct: 233 GADEQLIATLLEFGGDVGVAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLVALGLQL 292
Query: 245 GTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR- 299
+R + I D ++ + + + A+ E + A +L
Sbjct: 293 AAERGDHAAAKVIADAIGAADLAGATVDRVREALTSVGAVAAVERQIDELTASANAALDR 352
Query: 300 -CLPDSSWKKSLMEVVDFCLQRL 321
L + +L ++ QR
Sbjct: 353 AHLAE-PAPSALAGLIRLATQRK 374
>gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYR 60
L+ M ++N + + I I + ++Y + + G KR P++ ++ +
Sbjct: 49 DLKTYCANLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGS 108
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSAL 90
ACA+E +H A+L+HDD+
Sbjct: 109 RLAAFPTACALEMVHAASLIHDDLPCMDDS 138
>gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226]
gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226]
Length = 294
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L+ L EE
Sbjct: 121 TILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P ++ L + +A+
Sbjct: 241 QGLNKSTYP----------------------------------ALL----GLEGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
Length = 306
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALML 57
M L + + + K+N + + ++ D++KY + +GGKRLRPML+LA A
Sbjct: 1 MTRLAEFQSEWIPKLNQQLEDDLTRATNDSEFSDMMKYAVLNGGKRLRPMLSLAAMACFG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + + A A+E++H+ +L+HDD+ +RRGK + +G ++LVGD LL+
Sbjct: 61 QKITPSFLKAATAVEWVHSYSLVHDDLPAMDNDLVRRGKPSVHAQFGEAEAILVGDALLT 120
Query: 116 QAFC 119
AF
Sbjct: 121 GAFH 124
>gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267]
gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267]
Length = 297
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + + + IE IH A+LLHDDV+DD+ RRG + +G + +V++GD L S+ F
Sbjct: 43 GQSEQSLKICAIIELIHLASLLHDDVIDDAGTRRGSPSINASFGAKNAVMLGDILYSKGF 102
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ E +S L+ GE+ + LS + Y +I KTAVL AA
Sbjct: 103 -YELSKFPHEIAGEISGAVSKLSVGEMMDVELSAKFNENIAAYETMIYYKTAVLIEAAAA 161
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V +++ G++ K YG NLG+AFQ++DD+LD + +GK DF+ GK TLP
Sbjct: 162 VGAMLVGLETR---NFKIYGKNLGLAFQIIDDILDVTQDAATLGKPNFSDFKEGKTTLPY 218
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
I ++ + +K KS +S M E A+ + A G +A S+
Sbjct: 219 IYLYKSLNEADKEALKSLFKK-DLSEAERGWVRTKMNETGAIEKSVNLAKKLGLEAIKSV 277
Query: 299 RCL-PDSSWKKSLMEVVDFCLQR 320
PD L +V + R
Sbjct: 278 EKFNPDG-----LENIVKSMIDR 295
>gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 275
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 119/226 (52%), Gaps = 13/226 (5%)
Query: 5 EDLTLKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-- 59
++ K++ +V ++ K S ++ +Y GK LRP L + +A +
Sbjct: 8 KNAVSKELCEVEMILKNIGKDFSSGST--QEIFEYFFKVPGKYLRPSLIILSAKAINPEM 65
Query: 60 ---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ L AIE IH+A+L+HDD++D+ RRG+ ++G + +VL GD ++
Sbjct: 66 TIDERMKLINLCVAIELIHSASLVHDDIIDNDLFRRGQKTLNNIYGRKIAVLAGDAFYAK 125
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
AF ++++ + +A + ++ V + E+ Q ++N ++T++DY ++I+ KTA +A
Sbjct: 126 AFSILLKLPTNDAEQIITQVIEKMCVAEIEQ---AQNHEITKQDYFNIIEGKTASFMAAC 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
++ + + +AL++YG+NLG+ +Q++DD D +
Sbjct: 183 CKLGAKTVNAKEEEIEALENYGLNLGMLYQIIDDCTDGDSNATKNN 228
>gi|125978361|ref|XP_001353213.1| GA10416 [Drosophila pseudoobscura pseudoobscura]
gi|54641966|gb|EAL30715.1| GA10416 [Drosophila pseudoobscura pseudoobscura]
Length = 449
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/363 (11%), Positives = 93/363 (25%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 87 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 140
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + A
Sbjct: 141 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTEAGQDAATYD 200
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 201 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 260
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 261 YKPGTFQRPSLSVAVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLK 320
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKN 251
L + + GK++ ++ P
Sbjct: 321 LAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPTLPLDTTFSLVSAPVLFHLEHDPSL 380
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + + + K + AL T+ + A L+ P + +++L
Sbjct: 381 YAQLEQGKQSVDNIDYDKIHKAVLAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 440
Query: 312 EVV 314
++
Sbjct: 441 NII 443
>gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 766
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 109/316 (34%), Gaps = 22/316 (6%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + V +L+ + G+ RP + A +L + + L E +H + L+ DD+ D
Sbjct: 439 HQAVAAPVLHLLDNPGRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLHVSALVIDDIQD 498
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLL----------------SQAFCMVIETKSQEAL 130
+S RRG+ + ++G ++ G + + + A
Sbjct: 499 NSPTRRGRPSVHEIFGTAPAITAGTLGYYTFDALIQRVPQADDGTMLRIYRLYLRDLRAA 558
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
A + Q + + + + KT +L + EVS+++ G +
Sbjct: 559 HAGQALDLAGHHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRSTAEVSAILGGADETQ 618
Query: 191 RQALKSYGMNLGIAFQLVDDVL----DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
A+ +Y +GIA+Q+ DDV + + G +
Sbjct: 619 LDAICAYFEAVGIAYQITDDVFDLYGQCTPDEHRQGITTRSPAEDLHNGEVTYPVAHAIR 678
Query: 247 KREKNFWKSTIND-GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDS 304
+ + + + S +A ++ + AL A + D+L LP +
Sbjct: 679 LLDAADRQRLRDALRQCSDSGALQASDLLMRSGALDACMAEARELVDRTWDALAPLLPPT 738
Query: 305 SWKKSLMEVVDFCLQR 320
K + + + QR
Sbjct: 739 PHKAMVRALGWYAAQR 754
>gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603]
gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603]
Length = 294
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 52/306 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR RP L T ML A A+E IH +L+HDD+
Sbjct: 29 PLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMD 88
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136
LRRGK + + T++L GD L + AF + + + A +
Sbjct: 89 DDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGSLSPAGETQRVAMIQALAEASG 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
A + G+ L+ L EE A++ A + ++ L
Sbjct: 149 AQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGEKGRTILPHLDR 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y +G+AFQ+ DD+LD + +GK G D + K T P
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYP------------------- 249
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
++ L +A++ Q+A +L +P + + L E +
Sbjct: 250 ---------------ALL----GLEGAREKAHTLLQEALLALEAIPYN--TEHLEEFARY 288
Query: 317 CLQRLN 322
++R N
Sbjct: 289 VVERKN 294
>gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999]
Length = 294
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 50/303 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ ++Y + GKR+RP+L +L + L AIE IH +L+H +DD
Sbjct: 32 LLAAMEYALLGQGKRMRPLLISLVGDVLGVSKEKLAPLMVAIECIHAYSLVHDDLPDMDD 91
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--------SQEALEALSLVACT 139
LRRG + + T++LVGD L S AF + + + + A +
Sbjct: 92 DDLRRGMPTCHIQYTPGTAILVGDALQSLAFEHLAQHPVLSASEKVAVIQILAKASGYEG 151
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ G+ L + E A+L + V +L+ + + L ++
Sbjct: 152 MCGGQAIDLHFTNQDIDLETLTQLHRLKTGALLGACVDMVIALVPSLDVEHQALLHTFSR 211
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+LG+AFQ+ DD+LD + + +GK G D K T P
Sbjct: 212 SLGLAFQVQDDILDITSDSDTLGKPSGSDQDLNKSTFP---------------------- 249
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
++ L ++ +A S LP ++ + L E F ++
Sbjct: 250 ------------ALL----GLQASQEYLDRLYTQALQSSDQLPYNTAQ--LNEFAAFLVK 291
Query: 320 RLN 322
R +
Sbjct: 292 RNH 294
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 61/340 (17%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ ++ + V + + + ++ + + + Y + +GGKRLRP L LA A +
Sbjct: 2 ITDIKTYLHECAALVEKSLPEALPAEWNIPPQLRESMLYSLQAGGKRLRPALVLAAAEAV 61
Query: 58 EYRGDNHVLL---ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ ACAIE+IHT +L+HDD+ +D+ RRGK+ V+G ++L GD
Sbjct: 62 HGQAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDA 121
Query: 113 LLSQAFCMVIE---------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL+ AF ++ + + + +E L+++A + + +T + L
Sbjct: 122 LLTHAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELE 181
Query: 164 VIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
I KT+ L ++ I G +AL+ YG N+G+AFQ+ DD+LD G+ ++G
Sbjct: 182 YIHLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLG 241
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K D K T P ++ + +
Sbjct: 242 KKTNSDVEQQKVTYPYLI--------------------------------------GIDE 263
Query: 283 TEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQR 320
++ + ++AK ++ L L+ + D+ +QR
Sbjct: 264 SKAQVKRLTREAKAAILEAQL---DAPDKLLLIADYLVQR 300
>gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis]
Length = 379
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 71/350 (20%), Positives = 132/350 (37%), Gaps = 46/350 (13%)
Query: 15 VNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATALMLEYRG--- 61
+ S E++ ++ ++ + GGKR+RP L
Sbjct: 32 FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGN 103
D + A+E + L+HDD++D S RRG +G
Sbjct: 92 GADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGE 151
Query: 104 QTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++L+GD L+ A M+ + S + + G+ +S D T
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + V + KTA L + + + G + A +++G ++GIAFQL DD+L G+
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMR 275
+ GK G+D GK T+ +A R + + N +++ + ++
Sbjct: 272 PSVTGKPSGDDLIAGKRTVLFAMALARADAADPAAAELLRNGIGTQLTDNEVDTLRQVIT 331
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDS----SWKKSLMEVVDFCLQRL 321
+ A+ D E + + + A ++L S K L ++ +R
Sbjct: 332 DLGAVTDVETQIDTLVEAAANALDS---STATAESKARLTDMAIAATKRS 378
>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
Length = 294
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 53/304 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ + + Y + +GGKRLRP+L LA+ + D + A AIE IHT +L+H +DD
Sbjct: 33 LKESMLYSLNAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPAMDD 92
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-------TL 140
RRGK+ + T++L GD LL+ +F ++ + E + L+
Sbjct: 93 DDYRRGKLTNHKQFNEATAILAGDALLTYSFQLISSDDLLTSDEKVELIRILSEASGPAG 152
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
++ VT E+ + KT L A+ + + G ++ + L Y
Sbjct: 153 MVAGQILDMEAEKQAVTLEEMEEIHALKTGELIRFAIIAGAYLGGATDNQLKHLTDYAYY 212
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG+ FQ+ DD+LD G+ +++GK +G D N K T P +L
Sbjct: 213 LGLIFQVQDDILDITGDASKIGKPVGSDELNEKSTYPKLL-------------------- 252
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD--SLRCLPDSSWKKSLMEVVDFCL 318
L + Y +KA L DS L E+ +
Sbjct: 253 ------------------GLQGAIDQKNLYVEKAYKSLHLAGAEDS----LLAELTKYFS 290
Query: 319 QRLN 322
+R +
Sbjct: 291 ERDH 294
>gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
Length = 359
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 76/358 (21%), Positives = 129/358 (36%), Gaps = 37/358 (10%)
Query: 1 MKMLEDL------TLKDMEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTL 51
M + +L + + + + + + +L + GGKR+RPM
Sbjct: 1 MTNIPELADIPGAVREKLAIFLDQRREHVAEIGAPVSTAMSFLESFVLDGGKRVRPMYAW 60
Query: 52 ATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--- 105
A L + + A ++EFI L+HDD++D S RRGK
Sbjct: 61 AGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRES 120
Query: 106 -------------SVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELR 146
++LVGDF L A M ++ + + L L
Sbjct: 121 DFLGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRAREPWRGMRTEVLGGQLLD 180
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + A L + + IAG + + A + YG ++GIA+Q
Sbjct: 181 ISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGAREELISAFRGYGHDIGIAYQ 240
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISV 264
L DD L G+ GK G+D R GK T + LA QR +R+ + +
Sbjct: 241 LRDDQLGVFGDPAITGKPAGDDLREGKRTELLALALQRADERDPSAAATLRKFIGRTSDP 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++L + I+ ++ A + E R + + LR D ++L + R
Sbjct: 301 QDLLRLSQIIADSGAPDEIERRITALTESGLAHLRAANVDPQITETLEHLAIQATTRQ 358
>gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573]
gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573]
Length = 294
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 52/306 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR RP L T ML A A+E IH +L+HDD+
Sbjct: 29 PLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMD 88
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136
LRRGK + + T++L GD L + AF + + + A +
Sbjct: 89 DDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASG 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
A + G+ L+ L EE A++ A + ++ L
Sbjct: 149 AQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALSAGEKGRAILPHLDR 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y +G+AFQ+ DD+LD + +GK G D + K T P
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYP------------------- 249
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
++ L +A++ Q+A +L +P + + L E +
Sbjct: 250 ---------------ALL----GLEGAREKAHTLLQEALLALEAIPYN--TEHLEEFARY 288
Query: 317 CLQRLN 322
++R N
Sbjct: 289 VVERKN 294
>gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645]
Length = 293
Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 4 LEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + + + + V +++ I ++ E + + + Y I++GGKRLRP+L L T +
Sbjct: 1 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKEM 60
Query: 62 D-NHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+H +DD LRRGK V+G T++L GD LL+ AF
Sbjct: 61 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 120
Query: 119 CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
++ ++ + + L + + + +T E+ V + KT L
Sbjct: 121 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL 180
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 181 IEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 240
Query: 233 KPTLP 237
K T P
Sbjct: 241 KSTYP 245
>gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222]
gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222]
Length = 287
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/324 (21%), Positives = 122/324 (37%), Gaps = 54/324 (16%)
Query: 10 KDMEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+++V + + + D ++Y GGKR+R L + +A + R
Sbjct: 3 DRLDEVKTQVQAALDGAMAGLPEGELTDAMRYACI-GGKRIRAFLVMESARLFGLRDRES 61
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A A+E +H +L+H +DD LRRG + W T++L GD L S AF ++
Sbjct: 62 LPVAAAVEALHAYSLVHDDLPSMDDDDLRRGLPTVHVRWSEATAILAGDALQSLAFGLLT 121
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSK------NLDVTEEDYLHVIKSKTAVLFSAA 176
+ + L+LV+ R + + V D + + + + A +
Sbjct: 122 DAQIGAPEIRLALVSGFSEAVGGRGMVWGQALDIAAETAVEPLDLMAIKRLQQAKTGALI 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
++ A + L Y NLG+AFQ+ DDVLD G + GK G+D K T
Sbjct: 182 QFSATAGAVMAGQDTGPLAEYARNLGLAFQIHDDVLDVTGNEADTGKRTGKDGAANKATF 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+L L +A + + A+
Sbjct: 242 VSLL--------------------------------------GLEGARDKARTLVRNAET 263
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320
+L P +L ++ F ++R
Sbjct: 264 ALE--PYGEGAGNLRQLARFVIER 285
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68
+E V +L I ++ E + + ++Y + +GGKR+RP+L +T + + V +A
Sbjct: 8 LESVEMTMLTAISEQTNEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVA 67
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF
Sbjct: 68 AAVELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQ 120
>gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 351
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/280 (21%), Positives = 102/280 (36%), Gaps = 19/280 (6%)
Query: 42 GKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-- 98
GKRLR D V A ++E IH A ++HDD++DDSALR G+ A
Sbjct: 51 GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIA 110
Query: 99 ----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
+ +L+G + A +++ L
Sbjct: 111 LRGAVRRRPRSVAAARSLAMLVGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIA 170
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
GE ++ + T + L + +AG + + +YG+ LG
Sbjct: 171 GECLEILRTGAEPDTAASLKVIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLG 230
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
AFQL DD+L G+ GK +D +PT + ++ +++ +S + +
Sbjct: 231 EAFQLRDDLLGLFGDPGRTGKANADDVCGHRPTALLAETWRVAGDDDRDRLRSLLGRRDL 290
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ L +MR +A E + +A +L L
Sbjct: 291 DEDGLNAVRAVMRRLKAPGLVEGMISARVDEALAALHELD 330
>gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
Length = 288
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/329 (20%), Positives = 123/329 (37%), Gaps = 50/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M D ++ + + ++ I + Y +GGKRLR L L +A + E
Sbjct: 1 MFRKKLALDATRIQEQFDLVLDALGDLDITRAMAYAT-AGGKRLRGFLVLESARLHEIDL 59
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A IE +H +L+H +DD LRRG+ + W T+VL GD L + AF
Sbjct: 60 ARAIWPATGIEALHAYSLVHDDLPCMDDDDLRRGRPTVHVKWDEGTAVLAGDALQTLAFE 119
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVLF 173
+ + +A L + + L + LD+ T + + ++
Sbjct: 120 LCTRPEVGDAGVRAELALTLAQASGAQGMVLGQALDIAAETAATPLTLPEITRLQSGKTG 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + A + + L+ Y LG+AFQ+ DD+LD G+ ++ GK + +D + GK
Sbjct: 180 ALIEWSACAGARMAQADPDPLRQYARALGLAFQIADDILDVEGDADKAGKRLQKDAQAGK 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L L + RA +
Sbjct: 240 ATFVSLL--------------------------------------GLDAAKARAAELVDQ 261
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +L + ++L + F + R +
Sbjct: 262 ACVALDSY--GAQAETLKDAARFVIARDS 288
>gi|170062031|ref|XP_001866492.1| decaprenyl-diphosphate synthase subunit 2 [Culex quinquefasciatus]
gi|167880063|gb|EDS43446.1| decaprenyl-diphosphate synthase subunit 2 [Culex quinquefasciatus]
Length = 449
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/364 (14%), Positives = 102/364 (28%), Gaps = 57/364 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ K + + G ++ L +
Sbjct: 85 SLRWLLSDEIANVALHLRKLVGSNHPLLKTAKVLIYNGKNNMQAWG-----LIVLLVSKA 139
Query: 57 LEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA----AR 98
+ + + LA E I TA L+H +V+ L +
Sbjct: 140 VGHAPSVPDLEQDKSAGVLHSQRALAEITEMIRTAHLVHQGLVNLQPLANAGNELSGDSD 199
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLD 155
+++GN+ ++L GD+LL A + ++Q +E +S R + +
Sbjct: 200 MIFGNKIALLSGDYLLGNACLQLAGLRNQALIELISSSLRDMAESNFIGDRDVQNNPLPT 259
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG------------- 202
V S + + S LG
Sbjct: 260 APGGQPSAVHVSGDLGFGDLEDNTQPMSIKDVMGNPEKEWSLRHILGAGSLLGKSCQGAL 319
Query: 203 ----------IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L L + + T ++ A
Sbjct: 320 ILAGQAVELQKQGYLFGKHLSLAWQACIDLEPFSSPNLPPGTTFSLVSAPVLFHLEHDPS 379
Query: 253 WKSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
I G+ SV+++ K + + L T + A L LP S + +L
Sbjct: 380 LYEEIKKGQQSVDDIDYAKIHAEVIKGPGLDKTRALQKKHSLAAMTVLNELPPSDARTAL 439
Query: 311 MEVV 314
++
Sbjct: 440 QNII 443
>gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 313
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 26/260 (10%)
Query: 15 VNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + S + + +KY + +GGKRLRP+L LA + N +LL
Sbjct: 17 FENFLNSQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGS 76
Query: 70 AIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------- 118
++E IHT +L+HDD+ RRG + T++L GD L S AF
Sbjct: 77 SLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGD 136
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---------IKSK 168
+ + A + G++ L + + + K
Sbjct: 137 NEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLK 196
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L AAL + + + L YG +LG+ FQ+ DD+LD G +GK G+D
Sbjct: 197 TGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVEGTQESLGKTPGKD 256
Query: 229 FRNGKPTLPVILAFQRGTKR 248
R GK T P +L +R K
Sbjct: 257 QRTGKITYPALLGMERCKKM 276
>gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 313
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 26/260 (10%)
Query: 15 VNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ + S + + +KY + +GGKRLRP+L LA + N +LL
Sbjct: 17 FENFLNSQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGS 76
Query: 70 AIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------- 118
++E IHT +L+HDD+ RRG + T++L GD L S AF
Sbjct: 77 SLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGD 136
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---------IKSK 168
+ + A + G++ L + + + K
Sbjct: 137 NEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLK 196
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L AAL + + + L YG +LG+ FQ+ DD+LD G +GK G+D
Sbjct: 197 TGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVEGTQESLGKTPGKD 256
Query: 229 FRNGKPTLPVILAFQRGTKR 248
R GK T P +L +R K
Sbjct: 257 QRTGKITYPALLGMERCKKM 276
>gi|291446614|ref|ZP_06586004.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291349561|gb|EFE76465.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 359
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 19/307 (6%)
Query: 7 LTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNH 64
L +++ ++ D+++ L GGKR R A ++
Sbjct: 22 LFQDYFKRLRQEFDAPKLSRFTPRSFDLLEDLSLRGGKRQRVAFMYEAARLVTSEPVPGI 81
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------------- 107
A +IE + T L+HDD++DD+ RRG + + +
Sbjct: 82 DEAALSIELLQTHLLVHDDIIDDAPTRRGGTSTYYSYKEEFPEQPQTALGLALLAGDLAA 141
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ +L +A + ++ + + A + + + L + K+
Sbjct: 142 FLSLRVLLEADLPLSLRQALVETQVTAGAATFVGQMYDLERDLPALPTEEMLHEVSDYKA 201
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + L+ Y + GI+ Q+ DD L G+ GK
Sbjct: 202 SRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQMCDDYLSLFGDEKVTGKPATA 261
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D R+G+ T + E+ +S + S +++ I R + +
Sbjct: 262 DVRDGRRTYAIRAILAAADASERERVESILGRQDASADDIDTIREIARRHGVDQQLRSQM 321
Query: 288 YSYGQKA 294
+ Y ++A
Sbjct: 322 HRYAEEA 328
>gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 332
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 12/322 (3%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVL 66
+ + V +++ + S I + I + GK LR L L + +
Sbjct: 12 IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA AIE H ATL+HDDV+D++ LRR V+ N+ ++ GD+LLS A +
Sbjct: 72 LAAAIETFHLATLIHDDVIDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLATRGAQ 131
Query: 127 QEALEALS--------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
++ + + GEL QL N +T + YL IK KTA LF A +
Sbjct: 132 LLNIKDNWEDNGPLPYHIVERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAFLFGLACQ 191
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + + +A G+ LG+AFQL DD++DYR ++ GK +D +NG T P+
Sbjct: 192 LGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDYRLRADQSGKPRLQDVQNGIYTAPL 251
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
IL + + K + E L + +A TE Y K + +
Sbjct: 252 ILGMVQSETIKHLVDKHQSV--EWKEEELTLLHNHLLNTQAFEGTEALIEKYLVKIRQTS 309
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
LP + ++ + + L R
Sbjct: 310 GLLPLN-HQEGFLTFTEHILAR 330
>gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
Length = 294
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 52/306 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR RP L T ML A A+E IH +L+HDD+
Sbjct: 29 PLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMD 88
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136
LRRGK + + T++L GD L + AF + + + A +
Sbjct: 89 DDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASG 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
A + G+ L+ L EE A++ A + ++ L
Sbjct: 149 AQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGEKGRAILPHLDR 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y +G+AFQ+ DD+LD + +GK G D + K T P
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYP------------------- 249
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
++ L +A++ Q+A +L +P + + L E +
Sbjct: 250 ---------------ALL----GLEGAREKAHTLLQEALLALEAIPYN--TEHLEEFARY 288
Query: 317 CLQRLN 322
++R N
Sbjct: 289 VVERKN 294
>gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
Length = 304
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/328 (16%), Positives = 119/328 (36%), Gaps = 35/328 (10%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M L++ K++ + + SD ++ Y + +GGKRLRP+LTLA
Sbjct: 1 MTNLKNFQAIWRPKIDQQLQTDLIAISDDAEFAQMMCYAVLNGGKRLRPLLTLAVLSSFN 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115
N + LA A+E++H+ +L+HDD+ RRG+ + +G +++LVGD LL+
Sbjct: 61 VSVTPNLLKLATAVEWVHSYSLVHDDLPAMDNDLWRRGQPSVHAKFGESSAILVGDALLT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
AF +V E + + V++E + +I+ + +
Sbjct: 121 GAFQVVSEANA----------------------LAANVQKVSDEQVITIIRQLSRYAGAN 158
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAF-QLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
+ + + + +++ +Y L + ++ Y ++
Sbjct: 159 GMVIGQIHDMQNHGHQKSDVTYDWLLNDVYAPKTAALISYATDIGGKLSQEMASTLVHPK 218
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
T + F + + + E + ++ + + A
Sbjct: 219 TQYDLYQFGYDFGLAFQIQDDIDDFDQDNDEAVDSLPHLV----GMAAAKRTRNDLLADA 274
Query: 295 KDSLRCLPDSSW---KKSLMEVVDFCLQ 319
+ L + ++ L E +D +
Sbjct: 275 RQRLTNIAQREASFDRQLLDEFLDLIGE 302
>gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1]
gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1]
Length = 305
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLA 52
+ E L + + V L+ + V + +++ + +GGKRLRP L L
Sbjct: 6 IPTFESLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLVLE 65
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLH 81
+A + E +G + +A A+E +H +L+H
Sbjct: 66 SAALFEAQGMASLRVAAALECVHCYSLIH 94
>gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
ATCC 49725]
gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
ATCC 49725]
Length = 359
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/358 (19%), Positives = 115/358 (32%), Gaps = 37/358 (10%)
Query: 1 MKMLEDL------TLKDMEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTL 51
M + +L + + + + + +L + GGKR+RPM
Sbjct: 1 MTNIPELADIPGAVREKLAIFLDQRRDHVAEIGAPVSTAMSFLESFVLDGGKRVRPMYAW 60
Query: 52 ATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
A L + + A ++EFI L+HDD++D S RRGK
Sbjct: 61 AGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRES 120
Query: 109 V-----GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
F S A + A R +V L
Sbjct: 121 DFLGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRARDPWRGMRTEVLGGQLLD 180
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALK-----------------SYGMNLGIAFQ 206
+ A + ++ + L YG ++GIA+Q
Sbjct: 181 ISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGASDQLISAFRGYGHDIGIAYQ 240
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISV 264
L DD L G+ GK G+D R GK T + LA QR +R+ + +
Sbjct: 241 LRDDQLGVFGDPEITGKPAGDDLREGKRTELLALALQRADERDPSAAATLRKFIGRTSDT 300
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
++L + I+ ++ A + E R + + LR D ++L + R
Sbjct: 301 QDLLRLSQIIADSGAPDEIERRITALTESGLAHLRAANVDPQITETLEHLAIQATTRQ 358
>gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
Length = 294
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 113/306 (36%), Gaps = 52/306 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR RP L T ML A A+E IH +L+HDD+
Sbjct: 29 PLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMD 88
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136
LRRGK + + T++L GD L + AF + + + A +
Sbjct: 89 DDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASG 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
A + G+ L+ L EE A++ A + ++ L
Sbjct: 149 AQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGEKGRAILLHLDR 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y +G+AFQ+ DD+LD + +GK G D K T P
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYP------------------- 249
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
++ L +A++ Q+A +L +P + + L E +
Sbjct: 250 ---------------ALL----GLEGAREKAHTLLQEALLALEAIPYN--TEHLEEFARY 288
Query: 317 CLQRLN 322
++R N
Sbjct: 289 VVERKN 294
>gi|296809441|ref|XP_002845059.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
gi|238844542|gb|EEQ34204.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
Length = 319
Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 97/264 (36%), Gaps = 5/264 (1%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
GK +R + A L+ ++ ++ + +HTA+LL DDV D S LRRG A
Sbjct: 21 KPPGKDIRGQMIAAYNRWLQVPEESLAIVTKVVVMLHTASLLVDDVEDSSHLRRGAPVAH 80
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++G ++ +++ A + + + EA+ L G+ L L
Sbjct: 81 NIFGVPQTINSANYVYFLALEEIQKLNNPEAINIFIKELMNLHRGQGMDLYWRDTLTCPT 140
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
E+ + ++ + +++V +G+ FQ+ DD L+
Sbjct: 141 EEDYLEMVGNKTGGL---FRLAIKLMQTESNVPIDCVPLVDLMGLMFQVCDDYLNLSNPT 197
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
K + ED GK + PVI + + + + + E + A M+
Sbjct: 198 YSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLIN--ILKQKTNDNEVKQYAVRYMKSTG 255
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP 302
+ T A KA + L
Sbjct: 256 SFEYTRKVAIELRDKAFTLIDELE 279
>gi|310789778|gb|EFQ25311.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 742
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/286 (20%), Positives = 103/286 (36%), Gaps = 4/286 (1%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
+ + E++ KYL K +R + A L+ D + + ++H ++L+
Sbjct: 437 EDVKCRSELVLAPYKYLTSMPSKGIRELFIRALNWWLKVPDDKLACIQDVVSYLHQSSLM 496
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEALSLVAC 138
DD+ D S LRRG+ + V+G ++ +F+ QAF + EA++
Sbjct: 497 LDDIEDGSKLRRGQPSTHAVYGIGQTINSANFVFVQAFARMQSLGHGRAEAIDIFIDEVE 556
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L +G+ L + D ++ ++ + + +
Sbjct: 557 NLHKGQSYDLFWKDQVHCPSVDEYFMMIDNKTGGLFRLCVRLMEFFATGSTRGISSEFFV 616
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
L FQ+ DD + + K ED GK +LP+I Q R+
Sbjct: 617 KRLSRYFQIRDDYQNLMSDQYAKEKGFAEDLDEGKISLPLIYTLQSSPYRDAISRVFKRR 676
Query: 259 D--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
D G++ +E MR AL T S D L+ L
Sbjct: 677 DDGGEMGLEMKVFIIREMRNTGALDKTYDLLRSMQSDLMDELKRLE 722
>gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 794
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 52/320 (16%)
Query: 13 EKVNFLILKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLL 67
E++N + D+ + D Y + GGKRLRP+LT R ++ V L
Sbjct: 513 EQINSTLQIAKSEDIPPMKGTLIDAANYSLTGGGKRLRPILTWVMGVQQYGMRPESLVPL 572
Query: 68 ACAIEFIHTATLLHDDVVDDS-------ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
++E++HTA+L+ DD+ +V +L+ QA
Sbjct: 573 LRSLEYMHTASLIFDDLPSQDNAPTRRGRATLHEVHDSATAELTGLLLIQRATQEQASLA 632
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ +S AL S +K +T E + KT + F AAL +
Sbjct: 633 QFDPRSVLALIRYSSQKAEDLCAGQAMDLNAKGKPLTLEQLNAICFYKTGIAFEAALVMP 692
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++A LKS+ + GIAFQ+ DD+LD G+ N +GK +G+D N + +L
Sbjct: 693 AILAQAPEQEIGLLKSFAYHAGIAFQIKDDLLDVEGDANLLGKPVGQDADNNTSSFVTVL 752
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + + + A ++L+
Sbjct: 753 --------------------------------------GLEGAKREMWDHYCLALEALQK 774
Query: 301 LPDSSWKKSLMEVVDFCLQR 320
L S L ++++ + R
Sbjct: 775 L--SRKNTFLKHLLNYMIHR 792
>gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 254
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91
+ Y + +GGKR+RP+LT+A M + + A + E IHT +L+H +DD LR
Sbjct: 145 IHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLR 204
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
RG + +G ++L GD LLS++F
Sbjct: 205 RGMPTCHVKYGEDIAILAGDALLSKSFEHC 234
>gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida 3523]
Length = 293
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/283 (22%), Positives = 105/283 (37%), Gaps = 16/283 (5%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+KD E + + + + + Y FSGGKR+R A L + +
Sbjct: 6 IIKDFEIFAKNVFAQFDCVSKTLIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCDKV 65
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE IHT +L+HDD+ LRRGK + + T++L GD L S AF ++ +
Sbjct: 66 AFAIESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQDIN 125
Query: 126 S--------QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
A A + G+ + EE + + + +
Sbjct: 126 CSDIARLKKINKFFAQCCGADGMVGGQQLDIEGENKKLNLEELQILHTNKTAKMFRACIV 185
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
L + + L +G+ FQ+ DD+LD E+GK +D K T
Sbjct: 186 LPYILSQNQNDEIENLLVKLADLIGLCFQIKDDILDVTKTTIELGKTSAKDIHANKSTYV 245
Query: 238 VILAFQRGTKREKNFWKSTI------NDGKISVENLKKAFIIM 274
++ + K + + KIS L+K ++
Sbjct: 246 SLMGLEVANKYLLDKKNEITQIITKLKNNKISSNRLEKLIDLV 288
>gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 503
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 11/305 (3%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
IL+ + V+++ + YL + GK +R M+ A L + ++ + +HT
Sbjct: 190 AEILRCVS--VKILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHT 247
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+LL DDV D S LRRG A ++G ++ +++ A+ + + A +L
Sbjct: 248 ASLLMDDVEDGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDSSASNLW 307
Query: 137 ACTLA-----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
++ + ++ K + + ++A
Sbjct: 308 KLINEELLRLHRGQGMDLYWRDSLTCPTEEEYIQMVKNKTGGLFRIAIKLMMAMSPLQQI 367
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+GI FQ+ DD+L+ + K ED GK + P++ A + +
Sbjct: 368 PDYVPLVDLIGIIFQIRDDLLN-LSSDYTVNKGFCEDLTEGKFSFPIVHAIR--ADPSNH 424
Query: 252 FWKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ + A M+ + ++ T +A + L D+ +S+
Sbjct: 425 QLLNVLRQRPTDDGIKSYAVSYMKEKTKSFAYTRLVLGILEAQADKEVARLGDNPALRSI 484
Query: 311 MEVVD 315
++
Sbjct: 485 FSMMH 489
>gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
Length = 280
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 13 EKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ +L R+ +D D + Y + +GGKR+RPML + ACAI
Sbjct: 3 KEFEDYLLVRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPCACAI 62
Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
E IHT +L+HDD+ +D+ LRRGK + + T++L GD LL++AF
Sbjct: 63 EMIHTYSLVHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFE 112
>gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum
subterraneum]
Length = 312
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/314 (21%), Positives = 124/314 (39%), Gaps = 32/314 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
L + D+ + ++I + +I V+ GGKRLRP+L L L
Sbjct: 12 TLVETLRHDL---ETRLREKIEGRPDSFLIERAVR-----GGKRLRPILLLTVFKTLGGT 63
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ +A A+E H+A+L+HDD+VD +RRGKV+ G +++ G +++ A
Sbjct: 64 DYTKALDVAVALELAHSASLVHDDIVDFDKVRRGKVSLWYQIGAGKAIIQGHRIINLA-- 121
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
V + + +TE YL +I+ KTA LF AA +
Sbjct: 122 -FNIVLDIGEEMTRIFVEAWDRASKGILDEVVNKAALTERLYLLMIREKTASLFEAAAQA 180
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+++AG + Q ++ YG +G +QL DD+ + +G+ + +
Sbjct: 181 GAVLAGASPEMVQHMRRYGSEVGTVYQLADDLTENIKR-KNLGRMYFLTHEMRER--LIH 237
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L TK+ +++ ++ +R A D
Sbjct: 238 LLVATKTKQVSKLYRAVTPYTPQEEFMKRQIIERIRSA-------------VNLASD--D 282
Query: 300 CLPDSSWKKSLMEV 313
+P++ +K L E+
Sbjct: 283 RIPENPYKGLLKEL 296
>gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
Length = 306
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ + + ++Y+ GGKRLRP L L +A + G++ A AIE IH +L H
Sbjct: 35 ARPARLLEAMRYVALGGGKRLRPFLALESARLFGVCGESAARAAAAIEMIHCYSLAH 91
>gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
Length = 259
Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/297 (23%), Positives = 114/297 (38%), Gaps = 55/297 (18%)
Query: 41 GGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAA 97
GGKR+RP L ATA + + A A+E IH +L HDD +D+ LRRG+
Sbjct: 3 GGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTC 62
Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------------LVACTLAEGEL 145
+ +G T++L GD L S AF ++ E + + + G++
Sbjct: 63 HVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQV 122
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L +E A++ +A + + I + L+ YG +G+AF
Sbjct: 123 LDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAF 182
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD+LD +GK G+D + K T P ++
Sbjct: 183 QVQDDILDITSSTETLGKTAGKDEQVQKSTYPALM------------------------- 217
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A +A ++L +++ K L+E+ F L R N
Sbjct: 218 -------------GLEQAQIYAKELHDQAFEALAHFGENA--KELVEISQFLLARTN 259
>gi|326392941|ref|ZP_08214135.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325991017|gb|EGD49815.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 70
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + E++K+ ++EN + ++ A Y +KA D + L DS K+ L+E
Sbjct: 1 MIALLKKESYCEEDIKRIVEFVQENGGVDRSKMLAEKYTKKAFDKISMLKDSPPKQILIE 60
Query: 313 VVDFCLQR 320
V L R
Sbjct: 61 VTSKLLYR 68
>gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli]
Length = 375
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/306 (18%), Positives = 114/306 (37%), Gaps = 15/306 (4%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ +++ Y+ GK +R L A L+ ++ +++ + +HTA+LL DD
Sbjct: 70 SKNEKILMGPYDYMHQHPGKDVRTQLIQAFNSWLQVPPESLAIISKVVTMLHTASLLIDD 129
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V D+S LRRG A ++G ++ +++ A + + K+ A++ L G
Sbjct: 130 VEDNSVLRRGVPVAHNIFGTAQTINSANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRG 189
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L L ED + ++ + ++S + S +G+
Sbjct: 190 QGMDLFWRDTLTCPTEDEYLEMVGNKTGGL---FRLAVKLMQAESSTGKDCVSLVNVMGL 246
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD L+ K + ED GK + P+I + + + S +
Sbjct: 247 IFQICDDYLNLSNTTYTHNKGLCEDLTEGKFSFPIIHSIRS--NPGNHQLVSILKQKTQD 304
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS----------WKKSLMEV 313
E + A M+ + T +A + + + + L ++
Sbjct: 305 EEVKRYAVQYMQSTGSFTHTRQVVRDLRDRALSLIEAIDAAPLINGAGDGEMVRAVLHKI 364
Query: 314 VDFCLQ 319
VD L
Sbjct: 365 VDSTLS 370
>gi|167517607|ref|XP_001743144.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778243|gb|EDQ91858.1| predicted protein [Monosiga brevicollis MX1]
Length = 315
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/295 (19%), Positives = 117/295 (39%), Gaps = 18/295 (6%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + +Y+ GK +R L A L+ D ++ + +H A+LL DD+ D+S
Sbjct: 23 LEEPYRYVTQKPGKDIRSKLINAFNAWLKVPDDKLAIIKEVTKILHNASLLIDDIEDNSK 82
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG A ++G ++ +++ V++ +S A +A + L G+ +
Sbjct: 83 LRRGLPVAHAIFGIPQTINCANYMYFICMAKVMDLQSPAAAQAFTDQLIELHRGQGLDIF 142
Query: 150 LSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
TEE+Y ++ KT LF+ AL + L + + LK++ + Q+
Sbjct: 143 WRDTVQCPTEEEYKRMVLQKTGGLFALALRLMQLFSDDKRDFGPLLKTFSLYF----QIR 198
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + + K+ ED GK + P+I ++ ++ + + +
Sbjct: 199 DDYANLQSDEYAANKSFCEDITEGKFSFPIIHCIRQS--PTEHQLLNILKQRTDDRDLKL 256
Query: 269 KAFIIMRENRALVDTE--------YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
M + T + A+ + L + +L+ ++D
Sbjct: 257 HCLRCMERTGSFTYTHRFYTLRQVDVLNDLERTARAQIAELGGN---DTLVAILD 308
>gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
Length = 347
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 10/291 (3%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRG 93
+I GG R+RPML + A L + N L+ +E H+ +L+ DD+ D+S RRG
Sbjct: 53 IINRGGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112
Query: 94 KVAARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
+ A L++G S+ G+ + ++ ++Q+ L + + + +
Sbjct: 113 RSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENYFTTLSNLHLGQGIDI 172
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ + I S S L A + N+ +A K Y L +
Sbjct: 173 KFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKLYSTFLKLGVYFQII 232
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ GK G+D GK +LP+I Q K K + K+
Sbjct: 233 DDIKNIKNKINGKEFGDDLIEGKKSLPIIYFLQEKKFEPKIIAKFNQIKNAQTTTERKEI 292
Query: 271 F---IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFC 317
F ++ ++++ ++ A Y + K L P + +K L+++V+
Sbjct: 293 FKLTEMINSSKSIRNSTTIALKYLNEFKTELNLYPLKNRYKNILIDIVEQI 343
>gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246]
Length = 599
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 26/314 (8%)
Query: 31 PDVVKY-LIFSGGKRLRPMLTLATALMLEYRG-----------DNHVLLACAIEFIHTAT 78
+ + Y + GGKR RP +TLA L+ D+ A AIE H A+
Sbjct: 270 HEAIAYDFLARGGKRSRPFITLAAYDALKGAPATLADSGWELPDHVKRAAVAIEAFHKAS 329
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---------SQEA 129
L+HDD+ DD A R G +G T++ VGD+L+ + V +
Sbjct: 330 LVHDDIEDDDAYRYGAETLHRTYGVGTAINVGDYLIGVGYKCVSRDRKALGAEVAADVLD 389
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
A + + + +G +K+ +T D L + KT+ F AAL +AG +
Sbjct: 390 KLADAHIKLSEGQGAELLWREAKDKSLTTLDALKIYALKTSPAFEAALYTGVRLAGEATA 449
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ + + N+G+AFQ+++D+ D+ G+ + G+D +PTL + LA + T +
Sbjct: 450 YEKLIADFSRNVGVAFQILNDIKDWTGDEDNK-LVSGQDVLAARPTLLLALALEGSTPAQ 508
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRE----NRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ I + + N ++ +R + + + KA+ + +
Sbjct: 509 REELLHLIVQSRTTAANPEEIVARVRRLYFAAKVFEKADKLVDKFRAKAESLADEVQPTE 568
Query: 306 WKKSLMEVVDFCLQ 319
+++ L +VD L+
Sbjct: 569 FRELLYYLVDSVLE 582
>gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 341
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + GGKR P++ +A + AC
Sbjct: 58 ISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTAC 117
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD RRG+ + V+G ++L GD L F ++
Sbjct: 118 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPS 177
Query: 128 E 128
Sbjct: 178 H 178
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + GGKR P++ +A + AC
Sbjct: 58 ISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTAC 117
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD RRG+ + V+G ++L GD L F ++
Sbjct: 118 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPS 177
Query: 128 E 128
Sbjct: 178 H 178
>gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 279
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 110/273 (40%), Gaps = 10/273 (3%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ ++ + + ++ + + Y + SGGKRLRP L LA + AC
Sbjct: 2 IKDIDARLDAILEYYPKTSVVREAMTYSLMSGGKRLRPRLLLAMLEDFGCDYKLGLNPAC 61
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIET 124
A+E +HT +L+H +DD LRR K V+G ++L GD LL+ AF
Sbjct: 62 ALEMVHTYSLVHDDLPAMDDDDLRRFKPTNHKVFGEGVAILAGDALLTGAFTALSQSSLD 121
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L G + L + + D L + A +++
Sbjct: 122 SDVVGKCLEILARNAGNNGMILGQELDIDDHIDHIDDLVACYNLKTGCLFAGAFEMAVVI 181
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
++S ++ G+ LG+AFQ DD+L+ ++GK+ D K T+ +L ++
Sbjct: 182 AGKDSYQKLAHDLGLTLGVAFQFQDDLLEVTKTSEQIGKSNQSDADRDKTTVVSLLGVEQ 241
Query: 245 GT---KREKNFWKSTINDGKISVENLKKAFIIM 274
+ + K + I NLK+ M
Sbjct: 242 AHTLTESYFSNIKDLLKQMNIENGNLKQIIDEM 274
>gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 380
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 105/295 (35%), Gaps = 29/295 (9%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD-----NHVLLACAIEFIHTATLLHDDVVDDSALR 91
GGKR+RP+L L A+E + T L+HDDV+D S R
Sbjct: 65 FTLGGGKRMRPLLAWWGWLAGGGAPSGETARAARQACAAVELVQTCALVHDDVMDGSPTR 124
Query: 92 RGKVAARLVWGNQTSV----------------LVGDFLLSQAFCMVIETKSQEALEALSL 135
RG+ + + LVGD L A M+ E +
Sbjct: 125 RGRPSVHAAHALEHERDGHVGDSRRYGEALAVLVGDLALVWADDMLNEALPGVPEPVRAR 184
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIK------SKTAVLFSAALEVSSLIAGVQNS 189
E+ + + L + + +AG +
Sbjct: 185 AVWRDLRTEIMAGQFLDVRAQARRERSEEAALRVDLLKTASYSVERPLHLGAAMAGADPA 244
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
AL+ YG ++GIAFQL DD+L G+ + GK +GED R GK TL +++ + +R
Sbjct: 245 AVGALRGYGRDVGIAFQLRDDLLGVYGDSSRTGKPVGEDIREGKCTLLLVIGTRLARERG 304
Query: 250 KNFWKSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ ++ + E++ +A + A R ++ + L L
Sbjct: 305 DDAALRLLDRIGLPGEDVDPAEAADALDRLGARDLVGARCRELAERGRAHLEGLD 359
>gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
Length = 362
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 64/332 (19%), Positives = 111/332 (33%), Gaps = 36/332 (10%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY------RGDNHVLLACAIE 72
+ + S V ++ + + +GGKR+RP A + + A A+E
Sbjct: 35 LGDAVGSAVTLLEN----YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALE 90
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV-----GDFLLSQAFCMVIETKSQ 127
I L+HDD++D S RRG + F S A + +
Sbjct: 91 LIQACALIHDDIIDSSDTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAW 150
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-----------------SKTA 170
+ A ++ +V L +I A
Sbjct: 151 ADDMVRAAGLSHAALDRIQPAWRGMRTEVIGGQLLDIIHEASGDEDIATAQVVNRFKTAA 210
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + +AG + AL++YG ++G+AFQL DD L G+ GK G+D R
Sbjct: 211 YTIERPLHLGAALAGADAATIAALRAYGTDIGVAFQLRDDQLGVFGDPGVTGKPAGDDLR 270
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T+ + A Q ++ + + + + + + A E
Sbjct: 271 EGKRTVLIATALQLADAATADYIRGRLG-RVSDPDEIAELTAAIAATGAAERVEKLIGEL 329
Query: 291 GQKAKDSLR--CLPDSSWKKSLMEVVDFCLQR 320
+ LPD S ++L + R
Sbjct: 330 TASGLARIAGLGLPDGSE-EALRGLAMQATAR 360
>gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
Illinois]
gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
Illinois]
Length = 302
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 154/301 (51%), Gaps = 11/301 (3%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALML-EYR 60
L + + V ++ + + ++ I D K + S GKR+R +L+L + +
Sbjct: 9 LNASFSEKLRSVEEVLYDSMATFTKLRSIEDAKK--MLSSGKRIRALLSLLSFALCENSD 66
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
D + A IE IH ATL+HDDVVD++++RRGK + + GN+ SVL GDFLLS AF +
Sbjct: 67 TDVEIRAAATIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNRISVLTGDFLLSVAFEI 126
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++E ++ + LS A L+EGE+ QL ++ E + ++ + +A
Sbjct: 127 ILECENLSVVLLLSKTAKQLSEGEMLQLQSIG--EIVSESEYLEVIARKTAVLFSAAAEI 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ I + L+ G +G+AFQ++DDVLD GE E+GK++G DFR K TLP ++
Sbjct: 185 AAILTGKKEYVVILREIGFLIGMAFQIIDDVLD-YGESQEVGKSVGNDFRECKFTLPCVI 243
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA-KDSLR 299
A++ + + + +++++A M E AL A Y KA K +L
Sbjct: 244 AYRDARSKAAKEFWREVF--FTEEKDIQEARFFMYEVDALAKAMEVARDYLSKAEKKTLD 301
Query: 300 C 300
Sbjct: 302 I 302
>gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 317
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 18 LILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLL 67
++++ + + + + + + Y + SGGKRLRP+L L + + + +
Sbjct: 19 ILMELLPKEEGLEREVTEAMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAF 78
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
+E IH+ +L HDD+ R + + ++
Sbjct: 79 MAGMEMIHSFSLCHDDLPCMDGDRYRRGRKSTWYRYGEAM 118
>gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J]
gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J]
Length = 289
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 31/299 (10%)
Query: 10 KDMEKVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN 63
++K++ I K + S+ + + V Y I +GGKR+RP+L L L+ ++
Sbjct: 2 DKLKKIDQTIHAFYCEKAVISE--KLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTES 59
Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
H A A+E IHT +L+HDD+ +D+ RRG++ + T++L GD L AF M+
Sbjct: 60 HFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGML 119
Query: 122 IETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
ET + + + G ++ + ++ + + KT L +
Sbjct: 120 AETDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTGQLLAY 179
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
++ +A + ++ GM +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 180 PFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFEEIGKTPKKDVMAEKMT 239
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYGQK 293
P +L + E+L +A I+R+ + + + S ++
Sbjct: 240 YPHLLGLNESYQIL--------------DESLDQAEAILRKLSDEIAFAPQKILSLIER 284
>gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
12]
gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
12]
Length = 292
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIH 75
LI R S + ++Y + GG R+RP + L A AC AIE IH
Sbjct: 14 ALIRSRAGSCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPGLTDAACAAIELIH 73
Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+L+HDD+ D++ +RRGK W +VL GD L+ AF
Sbjct: 74 CGSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQ 120
>gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
Length = 294
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 50/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
ML++ + E ++ + + ++I D +KY + +GGKRLRP+L L T +L R
Sbjct: 1 MLKNYLKEKREIIDESVKNYLDDLKYPKVIADGMKYAVLNGGKRLRPILLLMTLKLLGER 60
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + A AIE IH+ +L+H +DD RRGK+ +G +L+GD LL+ AF
Sbjct: 61 EEKGIPAAVAIEMIHSYSLVHDDLPALDDDDYRRGKLTTHKKYGEAQGILIGDALLTHAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY--------LHVIKSKTA 170
++ + + + + ++ + + E + ++ KT
Sbjct: 121 NVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMIGGQMVDIESEGKSIDLPVLQYIHTHKTG 180
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
+ S +EV+ +IAG++ ++ L Y +G+AFQ+ DD+LD G+ ++GK +G D
Sbjct: 181 KMISLPVEVACIIAGIEGEKKEKLIEYSELIGLAFQIKDDILDIEGDFEKIGKPVGSDTE 240
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
K T P I + T+
Sbjct: 241 LEKSTYPSIF--------------------------------------GMEKTKEMLAEK 262
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ AK+ +R +S + +E+ D+ +R
Sbjct: 263 IEAAKNIIRSEFESDKGRLFIELADYIQER 292
>gi|156378051|ref|XP_001630958.1| predicted protein [Nematostella vectensis]
gi|156217989|gb|EDO38895.1| predicted protein [Nematostella vectensis]
Length = 393
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/337 (16%), Positives = 123/337 (36%), Gaps = 41/337 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + + + S ++ +Y + + R +L L A
Sbjct: 74 SLRCLLSDELSNIAMYMKRLVGSRHPLVKTARGFVYDGQYSMQT-----RGLLVLLVAKA 128
Query: 57 ----------------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ +A E IHTA L+H+ VVD +A+ +
Sbjct: 129 AAPCLPSNKVSMEHEAVSGIFPGQRQIAEITEMIHTAYLIHNGVVDLAAVPTKEFKDM-E 187
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+GN+ SVL GDFLL+ A + + + +S V L EG + S+ +T +
Sbjct: 188 FGNKMSVLTGDFLLANACTGLAALNDTQVVAMISTVISHLMEGRVM---SSEYNTLTLDY 244
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ ++ A L + + + + + +++ +G N+ A L D++ + +
Sbjct: 245 WKEIVFKSKASLLANSCQAALKLLSHSTELQEKAYEFGKNIAFAQHLKDELENLQSNQP- 303
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+ VIL+ ++ ++ + +K + A
Sbjct: 304 ---------AMTLNSASVILSLAEPQVQKMVKKVRENSNPIKNERLGRKIMEHVIAGDAP 354
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ Y Q A D++ P+S +++L+ ++
Sbjct: 355 RRMKTLLMEYSQGALDAVLYFPESEARQALLNIIRTV 391
>gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
Length = 269
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 65/325 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYR 60
K + L + K + + I + +KY L+ G KRLRP+L L T M
Sbjct: 4 KEIVKLINNSL--------KELSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNES 55
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A +IE IH +L+H + +DD RRGK+ +G +VLVGD LL+ +F
Sbjct: 56 ISEPMNYALSIELIHNYSLVHDDLECMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYSF 115
Query: 119 CM--VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ +A+ A +V + G +R L + +++E++ + + KT L A+
Sbjct: 116 EVLSESIKNEVDAMCANYIVKKSGCFGMIRGQLLDIDSEISEDNIIEIYDKKTCNLLKAS 175
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++ V + L++Y NLG+AFQ++DD++DY ++
Sbjct: 176 TVSAGILSKVDDETLLKLENYAFNLGMAFQIIDDLMDYENDIKI---------------- 219
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
K I + + + Y A Y QKA D
Sbjct: 220 -----------------------------EKKTYVTIFGKEKGI----YDANDYSQKAID 246
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321
++ + +S + L+E+ + L R
Sbjct: 247 CIKDIHNS---QPLIELTNKLLDRK 268
>gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
DM4]
gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
DM4]
Length = 288
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLL 67
++ ++ I ++ + ++Y +F GG R+RP L LA AL
Sbjct: 6 RIETVLDNAISHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPATSEAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE +H A+L+HDD DD+ +RR K + +G +VL GD L+ AF
Sbjct: 66 AAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFE 119
>gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 960
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 112/289 (38%), Gaps = 11/289 (3%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
YL GK +R L + L+ ++ ++ I +HTA+LL DD+ D S LRRG+
Sbjct: 678 YLESLPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTASLLIDDIQDQSLLRRGQP 737
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A ++G ++ G+++ A + + +S +A+ L G+ +L +L
Sbjct: 738 VAHSIFGTAQAMNSGNYVYFLALREIQKLQSPKAITIYVDSLIDLHRGQGMELFWRDSLM 797
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
E+ + + + +V+ LGI FQ+ DD L+ +
Sbjct: 798 CPTEEEYLDMVANKTGGLFCLAIQLMQ---AEATVKVDFVPLVRLLGIIFQICDDYLNLK 854
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
K + ED GK + P+I + + + + + + A M
Sbjct: 855 STAYTDNKGLCEDLTEGKFSFPIIHSIRA--NPGNRQLINILKQKPREDDIKRYALACME 912
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL-MEV-VDFCLQRLN 322
++ T +A +++ L K+ L + + L R++
Sbjct: 913 STKSFDYTRDVVKKLKTEALSTIQGL----EKQGLAENIGIRKILARMS 957
>gi|195162907|ref|XP_002022295.1| GL24462 [Drosophila persimilis]
gi|194104256|gb|EDW26299.1| GL24462 [Drosophila persimilis]
Length = 443
Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/357 (10%), Positives = 90/357 (25%), Gaps = 51/357 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 87 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 140
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSA---LRRGKVAAR 98
+ + LA E I + L+H+ +
Sbjct: 141 AAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSSTEAGQDAATYDDMSFGN 200
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+ L+G A E + Q + T
Sbjct: 201 KIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLPYKPGTF 260
Query: 159 EDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+ + + A + + ++ A G + + +L
Sbjct: 261 QRPSLSVAVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLKLAGQSE 320
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAF---------------QRGTKREKNFWKSTI 257
+ + GK++ ++ P + +
Sbjct: 321 ELQRHAYRFGKHLALAWQACLDAEPFQCPTLPLDTTFSLVSAPVLFHLEHDPSLYAQLEQ 380
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + K + AL T+ + A L+ P + +++L ++
Sbjct: 381 GKQSVDNIDYDKIHKAVLAGPALAKTKELQRKHTAAALAVLQHFPATDARQALENII 437
>gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101]
gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101]
Length = 301
Score = 59.6 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 48/300 (16%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDD 87
I + ++Y + +GGK LR L + +A + A AIE +H +L+HDD +D+
Sbjct: 43 IAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDN 101
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAE 142
LRRG+ + W T+VL GD L + AF + +T +A + +
Sbjct: 102 DDLRRGQPTVHVKWDEVTAVLAGDALQALAFELAAQTGCSDAGRVALVAGLAHASGVRGM 161
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ L ++ + + + ++ + + L+ Y +LG
Sbjct: 162 VGGQALDIAAESASVPLTLDQITTLQAGKTGALIEWAATAGPVMARDDPRPLQRYARDLG 221
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQ+ DD+LD G+ +GK +G+D GK T +L
Sbjct: 222 LAFQIADDILDIEGDAETVGKAVGKDAGAGKATFVSLL---------------------- 259
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + RA + + A ++L D + ++L + F + R +
Sbjct: 260 ----------------GLAPAKQRAQALIETACEALAVYGDDA--ETLRDAARFVIARKS 301
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 59.6 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + G KR P++ +A + AC
Sbjct: 55 ITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTAC 114
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD +RRGK + V+G+ ++L GD L AF ++
Sbjct: 115 ALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPP 174
>gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase
[Arabidopsis thaliana]
gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related
protein, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 59.6 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + G KR P++ +A + AC
Sbjct: 55 ITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTAC 114
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD +RRGK + V+G+ ++L GD L AF ++
Sbjct: 115 ALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPP 174
>gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 280
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 112/320 (35%), Gaps = 49/320 (15%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
M + + + D ++Y + +GGKR+RP + LA +A A
Sbjct: 1 MNNFETYLQHICDALQDSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAA 60
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+HDD+ LRRGK + + T++L GD LL+QAF +
Sbjct: 61 IEMIHTYSLIHDDLPAMDDDTLRRGKPTCHVQFDEATAILAGDALLTQAFLLGAMASEDA 120
Query: 129 ALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + + + L I V +
Sbjct: 121 MVNCAIVKALSRYAGADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAA 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
A + G +LG++FQ+ DD+LD V E+GKNI D +N K T +L
Sbjct: 181 YLTHHEEDIPAWEQIGSDLGLSFQIQDDILDVTSTVEELGKNINSDAQNNKRTYVSLL-- 238
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + A Y ++A+ L L
Sbjct: 239 ------------------------------------GIEEAQKEASFYYERAQQRLHELF 262
Query: 303 DSSWKKSLMEVVDFCLQRLN 322
D + +L + +R N
Sbjct: 263 DDAH--ALDAIFVALTKRKN 280
>gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39]
gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39]
Length = 294
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNNQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L+ L EE
Sbjct: 121 TILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P +L L + +A+
Sbjct: 241 QELNKSTYPALL--------------------------------------GLKGAQQKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 788
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 13 EKVNFLILKRICSDV------EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHV 65
E+V I + + E + + Y + +GGKRLRP++ +
Sbjct: 505 EEVQKRINNVLRIEDKDLLMGEPVREAANYSLAAGGKRLRPVIAWFVGVEAYGMEETALM 564
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
L ++E++HTA+L+ DD+ D++ RRGK A V+G + L G +L +A
Sbjct: 565 PLLRSLEYMHTASLIFDDLPAQDNAPSRRGKAAVHEVYGTAAAELSGLYLTQKAMEDQAS 624
Query: 124 TKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
S + + +K +T + + KT + F A++
Sbjct: 625 LTSSTPDAVLELIRYTARSTAEMCRGQAMDLEAKGKALTAGELDALCFYKTGIAFEASII 684
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ +++AG + LK + + GIAFQ+ DD+LD G+ +GK +G D RN K T
Sbjct: 685 MPAILAGAEQDEIDVLKKFARHAGIAFQIRDDLLDVEGDPMLLGKPVGTDRRNQKETYVS 744
Query: 239 ILAFQRGTKREKNFWK 254
L + +
Sbjct: 745 ALGKDGAKRSMWEHYC 760
>gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens AM1]
gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens AM1]
Length = 320
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ V ++ + + + + +++ + GGKRLRP L + TA ML D
Sbjct: 29 DTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLGGAEDAA 88
Query: 65 VLLACAIEFIHTATLLH 81
+ +E +H +L+H
Sbjct: 89 LAAGAGVELVHCYSLVH 105
>gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4]
gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens DM4]
Length = 320
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ V ++ + + + + +++ + GGKRLRP L + TA ML D
Sbjct: 29 DTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLGGAEDAA 88
Query: 65 VLLACAIEFIHTATLLH 81
+ +E +H +L+H
Sbjct: 89 LAAGAGVELVHCYSLVH 105
>gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 320
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 13 EKVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ V ++ + + + + +++ + GGKRLRP L + TA ML D
Sbjct: 29 DTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLGGAEDAA 88
Query: 65 VLLACAIEFIHTATLLH 81
+ +E +H +L+H
Sbjct: 89 LAAGAGVELVHCYSLVH 105
>gi|88813014|ref|ZP_01128257.1| Geranylgeranyl pyrophosphate synthase [Nitrococcus mobilis Nb-231]
gi|88789792|gb|EAR20916.1| Geranylgeranyl pyrophosphate synthase [Nitrococcus mobilis Nb-231]
Length = 68
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ + + A+ T A +A L L ++ +L+ +V F + R
Sbjct: 12 QIEAVQEAIEKTGAITYTYSLANEEADRAVAMLERLESGIYRDALVALVRFAISR 66
>gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[marine gamma proteobacterium HTCC2207]
gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[marine gamma proteobacterium HTCC2207]
Length = 339
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 111/285 (38%), Gaps = 9/285 (3%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ L L + ++ L + + + +Y + GK R L L + + L ++
Sbjct: 13 QSLGLNGLAELELLYKREMPDAQSTLAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDN 72
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ A A E +H A+L+HDD+ D S RRG+ + +G ++ +GD+++++AF +
Sbjct: 73 LHWAAACELLHNASLIHDDISDASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGARN 132
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV----- 179
L + +++ +D+ + K KTA L A ++
Sbjct: 133 ALYGGKLVTLLAQAMQETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAAIAA 192
Query: 180 --SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ N+ Q+L+ G+A+Q +D+ D + + +
Sbjct: 193 GLNAEQNEKLNAELQSLEKLVGYCGLAYQGRNDIDDIIPSSRR--SSDLDGRKPNLVVSL 250
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+ + ++ + + + +I++ N+++
Sbjct: 251 FAQQGPSADEFNLWYQSDDLSKLSQWQKRIASSDVILQANQSVDY 295
>gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca]
Length = 284
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 101/277 (36%), Gaps = 6/277 (2%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
Y + S GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG
Sbjct: 3 YSLIS-GKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFP 61
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A ++G + + +++ V+ +A++ + L +G+ + N
Sbjct: 62 VAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGLDIYWRDNYT 121
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
E+ + + + LK LG+ FQ+ DD +
Sbjct: 122 CPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLNTLGLFFQIRDDYANLH 178
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ K+ ED GK + P I A + ++ + +V+ K +
Sbjct: 179 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPES--TQVQNILRQRTENVDIKKYCVHYLE 236
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ T KA + + +L++
Sbjct: 237 NVGSFEYTRSTLKELESKAYKQIDARGGNPELVALIK 273
>gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 284
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 9/234 (3%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ +VN + + + + + ++Y + GKR RP+L A + + +CA+
Sbjct: 7 ITRVNAKLDQHLSAQGS-LAKAIRYSTLANGKRFRPILAYCVANIFNTNLNLVDSSSCAV 65
Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
EFIHT +L+HDD+ R + +G ++L GD L + AF +++ A
Sbjct: 66 EFIHTYSLIHDDLPAMDDDDIRHNQPVCHKRFGEAQAILAGDGLQALAFEVLVNDDLISA 125
Query: 130 LEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + + EG+ LS+ K A+L A + +
Sbjct: 126 DIKIELLKSLTHASFEMVEGQAIDLSIIAKQVNIATLETMHRKKTGALLSCAVNLGAIVS 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
N L ++ ++G+A+Q+ DDVLD +GKN D KPT P
Sbjct: 186 KMCNNKDSVILNTFSKDIGLAYQIQDDVLDIETPDALLGKNQYSDECKDKPTYP 239
>gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
Length = 284
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 63/318 (19%), Positives = 109/318 (34%), Gaps = 49/318 (15%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ +VN + K + + ++Y + GKR RP+LT + A + D +CAI
Sbjct: 7 ITRVNTKLEKYLPVQ-GYLTKAMRYSTLTNGKRFRPILTYSVANIFSTHLDLVDSSSCAI 65
Query: 72 EFIHTATLLH--------DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
EFIH +L+H DD+ + + F + ++
Sbjct: 66 EFIHAYSLIHDDLPAMDDDDIRHNQPTCHKLFGEAQAILVGDGLQTLAFKVLVNDNLIGS 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
E +++L+ + +AEG+ LS+ K A+L A + +
Sbjct: 126 DTKIELIKSLTHASFEMAEGQAIDLSIIAKQVNITTLETMHRKKTGALLNCAVNLGAIVS 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
N + L + ++G+A+Q+ DDVLD +GK D KPT P +L
Sbjct: 186 KNCNNKDQTILNIFSKDIGLAYQIQDDVLDIETPDELLGKKQYSDEYKNKPTYPSLL--- 242
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
L + +KA D + L
Sbjct: 243 -----------------------------------GLDKSRLVYKDLYEKAIDEIALL-- 265
Query: 304 SSWKKSLMEVVDFCLQRL 321
S L ++ +RL
Sbjct: 266 SVDAVELQQLTIKLQERL 283
>gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 329
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 107/287 (37%), Gaps = 19/287 (6%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
++ I +++ GKR+R L L + ++ + A AIE I A+L+HDD VD
Sbjct: 34 IKTIQQIIRD-----GKRVRGCLVCLINNALGGKTEDALPRAIAIECIQAASLIHDDYVD 88
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL- 145
+ +RR + A V G + +VL+GD + + A ++E +++ +A
Sbjct: 89 EDIIRRKRPATWTVEGPRRAVLLGDVIFATAIQSMVELGNEDGATVARAIATVANGAYQE 148
Query: 146 --RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
Q+ + + Y +I KT LF AA ++ ++ G + ++G G
Sbjct: 149 LSWQMDGGEANLLEAGIYDRIIYLKTGALFGAACQLGAIATGAPQETSASAYAFGTRTGE 208
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
A+Q+ DD+ D+ G + + G
Sbjct: 209 AYQIADDLQDFI--TLWEHPQEGLKKLSPLLPALNYFCHRTGLALPHYPPHRQKAWHDWC 266
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ M Q+A+ + LPD+ + K L
Sbjct: 267 QRIGEDFINCMEG---------ELNLRLQQAESYIESLPDNPYTKML 304
>gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
AM1]
gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
AM1]
Length = 288
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLL 67
++ ++ + ++ + ++Y +F GG R+RP L LA AL
Sbjct: 6 RIETVLDNAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPATSEAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE +H A+L+HDD DD+ +RR K + +G +VL GD L+ AF
Sbjct: 66 AAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFE 119
>gi|325118365|emb|CBZ53916.1| hypothetical protein NCLIV_036980 [Neospora caninum Liverpool]
Length = 465
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 18/311 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML------------TLAT 53
+D+E ++ +L + S + V +YL+ + GKR RP+L L+
Sbjct: 117 AFVREDIESLDLSLLSSVRSAYPEVSPVARYLLTAPGKRFRPVLLLLLRQALLNLPVLSR 176
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
A + D+ ++ + L V + + + + L+
Sbjct: 177 AE-PGSKADSPRSVSSLSPGSASPLLSRGSAVHTAESEARRKDGLELCMVHVAELIHTAR 235
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + L + + KTA L
Sbjct: 236 NGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDPRQNLENALRMYLTKTYH--KTASLI 293
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + +++ G+ + +G +G+AFQL DD LD+ +GK D R+G
Sbjct: 294 AESCACLAILMGLPSRWVSWSADFGACVGMAFQLYDDELDFTASSANLGKPTLSDLRSGV 353
Query: 234 PTLPVIL---AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
T P+++ + G + ++ + +++KA ++ A+ + A Y
Sbjct: 354 ITAPLLMAALEEETGGIPGERGARAILERRADGDGDVEKAINLIFAGDAMPRAQLLARLY 413
Query: 291 GQKAKDSLRCL 301
+A + L L
Sbjct: 414 VHRATELLEEL 424
>gi|323454203|gb|EGB10073.1| hypothetical protein AURANDRAFT_59945 [Aureococcus anophagefferens]
Length = 326
Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/286 (18%), Positives = 99/286 (34%), Gaps = 4/286 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + + Y+ + GK +R L A + L GD + + +H A+LL DD+ D
Sbjct: 8 DEALLEPFNYISENPGKNVRGSLIDAFNMWLGIPGDRVEAIKRIVSRLHNASLLVDDIED 67
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRGK A ++G +++ +++ A + EAL L G+ +
Sbjct: 68 GSQLRRGKPVAHAIFGVPSTLNTANYVYFIALEECHRLDNGEALAVFVEELLNLHRGQGQ 127
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + E + + + + L + FQ
Sbjct: 128 DILWRDSCRCPTEAEYTTMVLDKTGGLFRLAVGMMAAFSDRR--KGEFRKLVDLLALYFQ 185
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD+++ R + K+ ED GK + P++ A + + + +
Sbjct: 186 IRDDLVNLRSDDYMRSKSYCEDLTEGKFSFPILHAVHAAPGD--TRLLNILKQRTENPDV 243
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K A M + T + L + +LM+
Sbjct: 244 KKHAVEHMASLGSFAYTRTALAKLKADIGAEIALLGGHARLAALMD 289
>gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
Length = 227
Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 9 LKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + + N + K + + + +Y + GGKR+R +L LA ML +
Sbjct: 8 QEYLARANQALEKACETFLPEESEVCRAARYSLLGGGKRIRAVLVLAVCDMLNGSAEAAE 67
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A A+E +H +L+HDD +D+ LRRGK + +G T++L GD LL++AF
Sbjct: 68 QFAAAVEMLHCYSLIHDDLPCMDNDDLRRGKPSCHKAFGESTAMLAGDVLLTEAF 122
>gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
Length = 278
Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLA 68
M + + I + + + Y + GGKR+RPML TL + ++
Sbjct: 1 MPTIENRLKAYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESK--GVDPTPYIEAF 58
Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IHT +L+HDD+ LRRGK + + ++L GD LL+ +F +V + K
Sbjct: 59 LAVEMIHTYSLIHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQNKY 118
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
L+ + ++ ++ + + D+ ED + I+ + + +
Sbjct: 119 LSTLQKVEIIDIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMI 178
Query: 187 -----QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ ++ + G +G+ FQ+ DD+L+Y E GK+ +D RN
Sbjct: 179 AGVILSDHDIKSYEDLGYYIGLIFQIQDDILEYTLSPEEFGKSKSDDIRNKPTY 232
>gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 290
Score = 59.2 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVL 66
+E +N I + + E + + + Y + SGGKR+RP+L+L + D +
Sbjct: 13 IELINNSIYRSFTAADEYQKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILP 72
Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A AIE IHT +L+HDD+ +D+ LRRGK V+ ++L GD LL+ + ++
Sbjct: 73 FATAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAEVMSRE 132
Query: 125 KSQEA-----------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ ++ + + + + + ++ + + K KTA L
Sbjct: 133 LDKYDEMDELKRAIKAMKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLKTAALI 192
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AA+ ++IAG + + Y +GIA+Q+ DD+LD + + + N
Sbjct: 193 KAAIVSGAIIAGASDEEIATFEEYANCIGIAYQIRDDILDLEADSKKEKNTMVNFRSND 251
>gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 260
Score = 59.2 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + + + A AIEF
Sbjct: 13 EVNKLLPE--NSENKLIS-AMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69
Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
IH +L+HDD +D+S RRG+ + +G T+VL GD LL+ AF
Sbjct: 70 IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFE 117
>gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
Length = 616
Score = 59.2 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 25/313 (7%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALML--------------EYRGDNHVLLACAIEFIHT 76
+ + GGK RP TLA L D+ A AIE H
Sbjct: 282 EKLALDFLARGGKYSRPFTTLAVYDALTGGEGTSAGGAARVGEYSDSVKRTALAIETFHK 341
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+HDD+ DD A R G V +G T++ +GD+++ + +V +Q E +
Sbjct: 342 ASLVHDDIEDDDAYRYGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRI 401
Query: 137 ACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
LA+ +R + + D L + KT+ F AAL+ L++G +
Sbjct: 402 IDCLADAHMRLSEGQGAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTE 461
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+++ + ++G+AFQ+++D+ D+RG+ + + G D G+PT+ LA + +
Sbjct: 462 EDYSNSMRQFARHVGVAFQILNDLKDWRGDSDNK-LSAGGDVLGGRPTVLWALALENLNE 520
Query: 248 REKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ I+D S + + + E Y +A++ L
Sbjct: 521 ANRTELIQLISDDSQSPASRVAQVRQLYATAGVFDAAERLIDKYRSRAEEIADQLEPEEL 580
Query: 307 KKSLMEVVDFCLQ 319
++ + ++D L
Sbjct: 581 RRLMYYLIDTILD 593
>gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
Length = 294
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 72/334 (21%), Positives = 128/334 (38%), Gaps = 53/334 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L ++ ++++ + RI + + ++Y + GGKR RP L T ML
Sbjct: 2 IEALSSYQQRNSQQLDQWL-NRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IH +L+HDD+ LRRGK + + T++L GD L + AF
Sbjct: 61 LNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAF 120
Query: 119 CM----------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + + A + A + G+ L+ L EE
Sbjct: 121 TILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKT 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A++ A + ++ L Y +G+AFQ+ DD+LD + +GK G D
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+ K T P +L L + +A+
Sbjct: 241 QQLNKSTYPALL--------------------------------------GLKGAQEKAH 262
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ Q+A +L +P + + L E + ++R N
Sbjct: 263 TLLQEALLALEAIPYN--TEHLEEFARYVVERKN 294
>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
Length = 296
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 12 MEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLA 68
+ V IL + + + D + Y + +GGKR+RP+L L + D +A
Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++
Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAH 129
>gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
Length = 957
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 57/299 (19%), Positives = 117/299 (39%), Gaps = 11/299 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ E++ YL GK +R L + L+ + ++ + +HTA+LL DD+
Sbjct: 665 EEEILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTASLLIDDIQ 724
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG+ A ++G ++ G+++ A V + ++ +A+ L G+
Sbjct: 725 DQSILRRGQPVAHSIFGTAQAMNSGNYVYFLALREVQKLQNPKAISIYVGSLVDLHRGQG 784
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+L +L E+ + + + +V+ LGI F
Sbjct: 785 MELFWRDSLMCPTEEQYLDMVANKTGGLFCLAVQLMQ---AEATVQADFIPLVRLLGIIF 841
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ + K + ED GK + P+I + + + + +
Sbjct: 842 QICDDYLNLKSTAYADNKGLCEDLTEGKFSFPIIHSIRA--NPGNRQLINILKQKPREDD 899
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL-MEV-VDFCLQRLN 322
+ A M ++ T + +A D+++ L ++ L + + L R++
Sbjct: 900 IKRYALSYMESTKSFHYTRHVVKKLKTEALDTIQEL----ERQGLDENIGIRKILARMS 954
>gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis
HTCC2601]
gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601]
Length = 289
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 120/331 (36%), Gaps = 53/331 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M D V + +D+ ++ ++Y +GGK LR L L A + +
Sbjct: 1 MFRDSLEAGARAVAAHFDHVLSDAADLPVLH-AMRYAT-TGGKGLRGWLVLEGARLHDVA 58
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + ACAIE IH +L+H +DD LRRG W T+VL GD L + F
Sbjct: 59 PERALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQALGF 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAV 171
MV + + + + +LA + + + + +
Sbjct: 119 EMVADPRCHPDPLVRADLTLSLARAAGARGMVLGQALDMAAERADAPLDLQQITALQAGK 178
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + A + ++ L +Y LG+AFQ+ DD+LD G+ +GK +G+D
Sbjct: 179 TGALIAWSAEAGARLAHADLAPLTAYAERLGLAFQIADDILDVEGDAETVGKAVGKDAGR 238
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T +L L + RA S
Sbjct: 239 GKATFVSLL--------------------------------------GLEGAKARATSLV 260
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A D+L P +L E F + R N
Sbjct: 261 TEACDALS--PYGHRADALREAARFVISRRN 289
>gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Ralstonia
solanacearum UW551]
gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum IPO1609]
gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Ralstonia
solanacearum UW551]
gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum IPO1609]
Length = 299
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASIVARTESALERALPGESVAPQRLHAAMRYATLGAGKRVRPLLVHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E + ++CA+E IH +L+H
Sbjct: 61 EASPEALDRVSCAVEMIHAYSLVH 84
>gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2]
gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 308
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
E + +++ GGKRLRP L + +A + D V A AIE IH +L+H
Sbjct: 35 RPERLMAAMRHGALGGGKRLRPFLVIESAALFGIPADQAVTAATAIECIHCYSLVH 90
>gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582]
gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582]
Length = 300
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89
+ +++ GGKRLRP L AT M +N + A AIE IH +L+HDD+ +D+
Sbjct: 35 EAMRHGALLGGKRLRPFLVYATGEMFGVSLNNLDVPAAAIECIHAYSLIHDDLPAMDNDD 94
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
LRRG+ + +G ++L GD L + AF
Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFS 124
>gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae]
Length = 343
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 57/313 (18%), Positives = 124/313 (39%), Gaps = 9/313 (2%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
D ++VN + +++ Y+ GK +R +L L+ ++ ++
Sbjct: 39 DTKEVN--FDHWTSTKEKVVTGPYDYIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQV 96
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+ +HTA+LL DD+ D+S LRRGK A+ ++G ++ +++ A + K+
Sbjct: 97 VRMLHTASLLIDDIQDNSELRRGKPVAQNIFGTALTINSANYVYFLALEKLNSLKNPNIT 156
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + L G+ L L E+ + + + + ++S+
Sbjct: 157 DIFTEELLRLHRGQAMDLYWRDTLTCPTEEEYFEMVANMTGGL---FWLMYRMMNAESSM 213
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L LG+ FQ++DD + K GED GK + PVI + + +
Sbjct: 214 PIDLLPVVELLGVIFQVLDDYKNLCSREYGKLKGFGEDLTEGKFSFPVIHSIRSNPED-- 271
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KS 309
+ + A IM +L T++ + + ++ + + + K
Sbjct: 272 LQLLHVLQQKSSNEHVKLYAIEIMESTGSLEYTKHVVENIVSQIQEIIYSTDEGQGRGKG 331
Query: 310 LMEVVDFCLQRLN 322
+++++ + RL+
Sbjct: 332 ILDLLHK-ITRLS 343
>gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 296
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 22/287 (7%)
Query: 9 LKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML---EYRGD 62
+ ++K++ +I ++ + + I +GGKRLRP++ + EYR +
Sbjct: 3 KEKIKKIDSIIESFFYAEDGLNKKVITASNEAIKNGGKRLRPLIMFEIYRAVAGEEYREE 62
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
AIE IHT +L+HDD+ +D+ LRRGK + +G ++L GD L QAF +
Sbjct: 63 IIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCVQAFEI 122
Query: 121 VIETKSQEALEALSLVACT-------------LAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ + + + G+ + + +
Sbjct: 123 ISKKMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLRYTY-EL 181
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L A+ + ++AG + + LK G +G AFQ+ DD LD + E+GK
Sbjct: 182 KTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVADEKELGKPTHS 241
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
D +N K T I+ KR + K ++ F I+
Sbjct: 242 DEKNEKTTYVNIVGINESLKRVETLSSDAKKCLKEVRGDMDSIFEII 288
>gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
Length = 297
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 22/287 (7%)
Query: 9 LKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GD 62
+ K+ LI ++ E+ + I +GGKRLRP++ T + +
Sbjct: 4 KDSLSKIEKLIESFFYNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGDEYSEE 63
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
AIE IHT +L+HDD+ +D+ LRRGK + +G ++L GD L QAF +
Sbjct: 64 IIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSVQAFEI 123
Query: 121 VIETKSQEALEALSLVACTLAEG-------------ELRQLSLSKNLDVTEEDYLHVIKS 167
+ + + + + + S E
Sbjct: 124 ISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKYTYA-L 182
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KT L +A+ V ++AG + + LK G +G AFQ+ DD LD + E+GK
Sbjct: 183 KTGALLAASFVVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVADEKELGKPTHS 242
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
D +N K T I+ +R + ++ ++ I+
Sbjct: 243 DEKNLKITYVNIVGTDESLRRIVSLSENAKKCLSEVRGDMSSVVEII 289
>gi|108799219|ref|YP_639416.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119868335|ref|YP_938287.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108769638|gb|ABG08360.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119694424|gb|ABL91497.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 418
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 67/328 (20%), Positives = 120/328 (36%), Gaps = 28/328 (8%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHT 76
L+ I ++ + + + + SGGKRLRP + + + LA A+E +H
Sbjct: 81 LRSIDENLGTVAALCQSAVQSGGKRLRPRFAYWAWRVGAPADAAPQPLIRLAAALELLHA 140
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQT-----------------------SVLVGDFL 113
A L+HDDV+D S +RRG+ + R
Sbjct: 141 AILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHDT 200
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
A + +Q A + + G+L +L D + +++ KT+
Sbjct: 201 FDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAYT 260
Query: 174 SAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + Q L+ Y +G AFQL DD+ D G GK G+D R
Sbjct: 261 VERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDDLADLFGTTKTSGKRTGDDIRA 320
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GKPT + A++ +++ + + D + + ++ + A R
Sbjct: 321 GKPTELLGAAYELADDLDRSLLATIVGDATADQAAIAEVQTVVLQCGAADRVGRRIADLV 380
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
A+ ++ L S+ +L + D +
Sbjct: 381 ATARRAIADLSASADPTALAGLSDMLAE 408
>gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
Length = 296
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 56/327 (17%)
Query: 5 EDLTLKDMEKV-NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ K ++++ LK I + + + + Y + +GGKR+RP+L L +A + +
Sbjct: 13 KNYVEKCLKEIAEKHTLKAIAT---LGMESMNYSLLAGGKRIRPILCLQSADLYHISNEA 69
Query: 64 HVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A A+E IHT +L+H +DD LRRGK V+G ++L GD LL+ A+ ++
Sbjct: 70 ILPYASALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEAIAILAGDGLLNLAYEIM 129
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--------IKSKTAVLF 173
+ + +A+ ++ + + + ++KT L
Sbjct: 130 LNDLLHGYTDGKLKAVHYIAKAAGIHGMVAGQVLDLQMENQRCDADLLKKIHRNKTGELL 189
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A++ +L+ G + Y +LG+ FQ+ DD+LD G V MGKN G D +
Sbjct: 190 KASILAGALVGGASEEDCYYWEQYADHLGLVFQITDDMLDVIGNVELMGKNTGMDSKKNT 249
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
L + A
Sbjct: 250 YPQLF----------------------------------------GLEKSVELAKCNANS 269
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A L + ++ E+++ L+R
Sbjct: 270 ALCCLEKIEKDTY--FFEELINQLLER 294
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + GGKR P++ +A + AC
Sbjct: 315 ISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTAC 374
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD RRG+ + V+G ++L GD L F ++
Sbjct: 375 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPS 434
Query: 128 E 128
Sbjct: 435 H 435
>gi|126434877|ref|YP_001070568.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126234677|gb|ABN98077.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 418
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 67/328 (20%), Positives = 120/328 (36%), Gaps = 28/328 (8%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHT 76
L+ I ++ + + + + SGGKRLRP + + + LA A+E +H
Sbjct: 81 LRSIDENLGTVAALCQSAVQSGGKRLRPRFAYWAWRVGAPADAAPQPLIRLAAALELLHA 140
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQT-----------------------SVLVGDFL 113
A L+HDDV+D S +RRG+ + R
Sbjct: 141 AILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHDT 200
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
A + +Q A + + G+L +L D + +++ KT+
Sbjct: 201 FDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAYT 260
Query: 174 SAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + Q L+ Y +G AFQL DD+ D G GK G+D R
Sbjct: 261 VERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDDLADLFGTTKTSGKRTGDDIRA 320
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GKPT + A++ +++ + + D + + ++ + A R
Sbjct: 321 GKPTELLGAAYELADDLDRSLLATIVGDATADQAAIAEVQTVVLQCGAADRVGRRIADLV 380
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
A+ ++ L S+ +L + D +
Sbjct: 381 ATARRAIADLSASADPTALAGLSDMLAE 408
>gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium
KB13]
gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium
KB13]
Length = 303
Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
D+ V I K + ++ + +K+ S GK +R L LA+ +L D + +
Sbjct: 20 ADLHLVKKEIQKALQDKKTILNEWLKFQNRSKGKFIRAQLALASGELLNLPKDTVIKWSV 79
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A E IHTA+L+HDD+ D RRG +G ++ +GDF+++QAF + E ++
Sbjct: 80 ACELIHTASLIHDDICDQDEKRRGLTTIWKKYGVPAAICLGDFIIAQAFQKLSEIETGWH 139
Query: 130 L 130
Sbjct: 140 Q 140
>gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
Length = 288
Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLL 67
++ ++ + ++ + ++Y +F GG R+RP L LA AL
Sbjct: 6 RIETVLDNAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPAASEAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE +H A+L+HDD DD+ RR K + +G +VL GD L+ AF
Sbjct: 66 AAAIELLHCASLVHDDLPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAFE 119
>gi|303312145|ref|XP_003066084.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105746|gb|EER23939.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040065|gb|EFW21999.1| geranylgeranyl pyrophosphate synthetase [Coccidioides posadasii
str. Silveira]
Length = 467
Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 10/280 (3%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y + GKR P A L + ++ + +L+ DD+ D S LRR
Sbjct: 170 PYDYTMSLPGKRTIPKFIGALQDWLHVPLTSMKIIENIATDMVNVSLMLDDIQDGSELRR 229
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G AA +++G ++ ++L +A + K++E + L G+ L
Sbjct: 230 GFPAAHVIYGCSQTINSSTYILVKAVERLQRLKNEECRVVFYEESRNLCVGQGFDLYWRH 289
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
++ D + F + A + L +G +Q+ DD
Sbjct: 290 HVQCPSVDDYITMVDNKTGSFFRLATRLMVAAAPSSFGSAELFQLVSLMGRYYQIRDDYQ 349
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK----------I 262
+ + K +D GK +LP+I Q ++ + + I +
Sbjct: 350 NLASDEYAAKKGFCDDLSEGKFSLPLIHFLQHAPSQKADQIRGLIFHRHQGAGSPLKSTL 409
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
S+E + +++ +L + L L
Sbjct: 410 SIETKQWILSEIKKVGSLEYVHDILDDMHEAMSRMLDGLE 449
>gi|302661975|ref|XP_003022648.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
[Trichophyton verrucosum HKI 0517]
gi|291186605|gb|EFE42030.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
[Trichophyton verrucosum HKI 0517]
Length = 388
Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 93/276 (33%), Gaps = 11/276 (3%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH------DDVVD 86
Y + GK +R L A L+ ++ +E + DDV D
Sbjct: 72 PYSYTVNQPGKDIRGQLIAAYNRWLQVPEESLASAVGKLEQNEATLFANILPPSIDDVED 131
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRG A ++G ++ +++ QA + + KS EA+ L G+
Sbjct: 132 SSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGM 191
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
L L E+ + ++ + ++SV +G+ FQ
Sbjct: 192 DLYWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESSVPIDCVPLVDLMGLMFQ 248
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD L+ K + ED GK + PVI + + + + + E
Sbjct: 249 VCDDYLNLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLIN--ILKQKTNDNEV 306
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
K A M + T A KA + L
Sbjct: 307 KKYAVKYMESTGSFEYTRKVAIELRDKAFLLIEELE 342
>gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Ralstonia solanacearum CFBP2957]
gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Ralstonia solanacearum CFBP2957]
Length = 299
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASVVARTESALERALPGESVAPQRLHAAMRYATLGAGKRVRPLLVHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E + ++CA+E IH +L+H
Sbjct: 61 EASPEALDGVSCAVEMIHAYSLVH 84
>gi|148673065|gb|EDL05012.1| mCG2750, isoform CRA_a [Mus musculus]
Length = 253
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 100/273 (36%), Gaps = 26/273 (9%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLVWGNQTSVLVGDFLL 114
M+ LA E IHTA L+H +V+ S L+ + +GN+ ++L GDFLL
Sbjct: 1 MVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLL 60
Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKT 169
+ A + ++ + +E LS L G ++ S D+ +
Sbjct: 61 ANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSH 120
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + + + +A +V+ YG ++ ++ ++ D+ + + K +
Sbjct: 121 CALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKASDSKTFNLNS 180
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ ++ + + ++ + +
Sbjct: 181 AP-------------------VVLHQEFLGRDLWIKQIGELRETIKAGKGVTSAIDLCRY 221
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+G KA ++L P S + +L +V F + R +
Sbjct: 222 HGNKALEALESFPPSEARSALENIV-FAVTRFS 253
>gi|195441005|ref|XP_002068323.1| GK25396 [Drosophila willistoni]
gi|194164408|gb|EDW79309.1| GK25396 [Drosophila willistoni]
Length = 443
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/363 (12%), Positives = 97/363 (26%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 81 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 134
Query: 56 MLE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ LA E I + L+H+ VV+ A
Sbjct: 135 AAGHAASIPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQASTEAGQDVATYD 194
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 195 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 254
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 255 YKPGTFQRPSLNVGVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLK 314
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-------------GTKREKNFW 253
L + + GK++ ++ P +
Sbjct: 315 LAGQSEELQRHAYRFGKHLAMAWQACLDAEPFQCSTLPLDATFSLVSAPVLFHLEHDPSL 374
Query: 254 KSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + GK SVEN+ + + AL T+ + A L+ P + +++L
Sbjct: 375 YAQLEKGKQSVENIDYDQIHKAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALE 434
Query: 312 EVV 314
++
Sbjct: 435 NII 437
>gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
Length = 305
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+++ + +GGKRLRP L + TA ML D + +A A+E IH +L+H
Sbjct: 46 AMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVH 94
>gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum MolK2]
gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum MolK2]
Length = 299
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASIVARTESALERALPGESVAPQRLHAAMRYATLGAGKRVRPLLVHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E + ++CA+E IH +L+H
Sbjct: 61 EASPEALDGVSCAVEMIHAYSLVH 84
>gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
Synthase
gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
Synthase
Length = 301
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
Length = 321
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 9 LKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ +V + + +C++ + + ++Y GGKR R +L LAT + +
Sbjct: 27 QDGVRRVEQALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLATGALADTPAPMLD 86
Query: 66 LLACAIEFIHTATLLHDDVVDDSA 89
+ AIE +H TL+HDD+
Sbjct: 87 DVGAAIEMMHACTLVHDDLPAMDD 110
>gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378]
Length = 188
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L + ++ + K I + + + Y + +GGKR+RPML AT L
Sbjct: 1 MQDLTLFLDHYKKVLDESLFKEINMRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ A A+E IHT +L+HDD+ +
Sbjct: 61 IEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIY 105
>gi|238609989|ref|XP_002397611.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
gi|215472450|gb|EEB98541.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
Length = 121
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 25/69 (36%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ +V + + S + ++ KY K+LRP++ L + G N A
Sbjct: 1 LSRVRESLGHLLGSAHPSLDEIAKYYFLRPSKQLRPLIVLLFSQATNGLGKNWPAKLWAA 60
Query: 72 EFIHTATLL 80
E +
Sbjct: 61 ECQGAGGCM 69
>gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
Length = 292
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 70/329 (21%), Positives = 117/329 (35%), Gaps = 51/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
L + + V + + + + + ++Y GKRLR L T M +
Sbjct: 2 DLSRRVAEAADLVTVALDELLPRGEGPESRLTEAMRYAALGPGKRLRTFFALETGRMFDL 61
Query: 60 RGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ ACA+E IH +L+H +DD +RRG+ + T+VL GD L + A
Sbjct: 62 DDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDALQTAA 121
Query: 118 FCMVIETKSQEALEALSLVACTLAE------GELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + + + LA Q+ + + + KT
Sbjct: 122 FEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQRLKTGA 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + A E+ ++A + R AL ++ +LG+A+Q+VDD+LD G+ MGK +D
Sbjct: 182 LIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGDEAAMGKAARKDVEK 241
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK +L + R
Sbjct: 242 GKANFVTLL--------------------------------------GVDAARERLGVLA 263
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ K L L VDF L+R
Sbjct: 264 GQTKAHLDPF--GRRADFLRASVDFVLER 290
>gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
Length = 293
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 13/276 (4%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T +L
Sbjct: 190 ADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLL 249
Query: 241 AFQRGTKREKNFWKSTINDGKISVEN--LKKAFIIM 274
+ + +++ E +K I+
Sbjct: 250 GKDGAEDKLTYHRDAAVDELTQIDEQFNIKHLLEIV 285
>gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 322
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 100/285 (35%), Gaps = 10/285 (3%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S ++ + Y+ + GK +R L A LE D+ ++ + +H A+LL DDV
Sbjct: 18 SQENILMEPYIYISQNPGKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNASLLMDDV 77
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-------A 137
D+S LRRG A ++G ++ +++ AF +++ +S +
Sbjct: 78 EDNSELRRGLPVAHTIYGVPQTINAANYVYFLAFQELLQLRSGVMGKGKDKEVDLVAAVN 137
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
L + Q D L ++ + ++
Sbjct: 138 EELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKLMMAKSDSNVDYVPL 197
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+ + FQ+ DD ++ + + K ED GK + PV+ + + +
Sbjct: 198 VNLISVWFQIRDDYMNLQSPAYKSNKGFCEDLTEGKFSFPVVHGVR--ADTSNRQILNVL 255
Query: 258 NDGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDSLRCL 301
S++ + + + ++ T + + ++ L
Sbjct: 256 QKRTSSIDLKQHIVDYLSNHTKSFHYTRKVLTELEVQIMEEIKAL 300
>gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 425
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 77/318 (24%), Positives = 117/318 (36%), Gaps = 34/318 (10%)
Query: 13 EKVNFLILKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLA 68
E+V+ + + SD ++ + GGKR+RP L + L
Sbjct: 56 ERVD----EAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAADTTAALRLG 111
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDF 112
A+E I + L+HDDV+D S LRRGK A +G +VL GD
Sbjct: 112 VALELIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDL 171
Query: 113 LLSQAFCMVIE------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
L+ A V E + + ++ +A L + E+
Sbjct: 172 ALAWADDTVAETALSAVQRRRIGPLWRTMRTEMVAGQYLDLRGQVRGGSSVEQALRTACL 231
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
+ L + + +AG + AL+S G GIAFQL DD+L G+ GK G
Sbjct: 232 KSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSG 291
Query: 227 EDFRNGKPTLP----VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+D R GK T A G K+ G ++ E+L + ++ E A
Sbjct: 292 DDIREGKSTYLLPVARRWAEPAGNKQSLAVLGRFPGGGNLAKEDLPEVRGVLEETGARAH 351
Query: 283 TEYRAYSYGQKAKDSLRC 300
E +A A L
Sbjct: 352 VERKADPLRDHALGRLAQ 369
>gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021]
gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021]
gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
Length = 304
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 72/327 (22%), Positives = 118/327 (36%), Gaps = 58/327 (17%)
Query: 14 KVNFLILKRIC--------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
V L+ + + + +++ + +GGKRLRP L + +L + +
Sbjct: 18 AVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAESTALLGGDAEAAL 77
Query: 66 LLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A+E IH +L+H +DD +RRGK + + T++L GD LL+ AF +V
Sbjct: 78 RTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGDSLLTFAFDIVAA 137
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSA 175
++ + + + LA + + KT L
Sbjct: 138 PETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVLLQSMKTGALIRF 197
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IA R+ L+++G +G+AFQL DD+LD + +GK G+D GK T
Sbjct: 198 ACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTADAAIVGKATGKDAARGKGT 257
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
L + E R S +A+
Sbjct: 258 LVSLHGQPW--------------------------------------AERRLESLVAEAE 279
Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L P L E F R N
Sbjct: 280 GLLE--PYGPRSAILAETARFIANRRN 304
>gi|67902312|ref|XP_681412.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
gi|40739975|gb|EAA59165.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
gi|259480909|tpe|CBF73971.1| TPA: geranylgeranyl pyrophosphate synthetase AtmG, putative
(AFU_orthologue; AFUA_8G02400) [Aspergillus nidulans
FGSC A4]
Length = 355
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 92/283 (32%), Gaps = 20/283 (7%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ E+I V Y+ GK +R L A + + ++ A+ +H A+LL DD
Sbjct: 64 GKEEEIISAPVHYISTLPGKDIRGKLISAFNEWFQIPDEQLEIIKRAVGLLHVASLLIDD 123
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG A ++G ++ ++ QA V++ + E +
Sbjct: 124 IEDYSKLRRGFPVAHSIFGIPQTINSANYAYFQAQNEVLKLRRCEKALRIFTEELLRLHR 183
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
++ + ++ L + +
Sbjct: 184 GQGMDLYWRDSLTCPSEEEYLDMVANKTGGLFRLAIKLIQLESDVDEF------------ 231
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-----N 258
+ DD + + + K GED GK + P++ + + ++ S
Sbjct: 232 ---IRDDYQNLQSDQYAKNKGFGEDITEGKFSYPIVHSIRSSSRTGVGSDSSLQLLSILR 288
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
K I+ + + T + +A+D L L
Sbjct: 289 QKTEDEAVKKYTIQILEKTGSFEFTRQKLRDLTARARDMLTEL 331
>gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 288
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 54/332 (16%)
Query: 1 MKMLEDLTLKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M L D ++ +N +L + + + Y + +GGKR+RP+L L T L
Sbjct: 1 MNKLIDEVNNELSVAINKSVLD------TQLEESMLYSLNAGGKRIRPVLLLLTLDSLNT 54
Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++A
Sbjct: 55 EYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKA 114
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTA 170
F ++ + ++ + + + E + K+KT
Sbjct: 115 FELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTG 174
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + A+ ++ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D
Sbjct: 175 ALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLE 234
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
N K T ++ ++ A E + +
Sbjct: 235 NNKSTY----------------------------------VSLLGKDGA----EDKLTYH 256
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A D L + + K L+E+VD R +
Sbjct: 257 RDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH 288
>gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R]
gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R]
Length = 327
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/286 (21%), Positives = 103/286 (36%), Gaps = 6/286 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
SD + + + YLI GK +R + A L D ++ + +H A+LL DD
Sbjct: 31 QSDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGRIVGMLHNASLLVDD 90
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAE 142
V DDS LRRG A ++G + +++ QAF V S + + ++V L
Sbjct: 91 VEDDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEVSALQASCDKYDLHTIVIDELLN 150
Query: 143 GELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
Q D + ++ L V ++A SV
Sbjct: 151 LHRGQGLDLLWRDTLTCPSEQEYIAMVNNKTGGLFRLAVRLMMANATTSVGVDFIPLVNL 210
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+GI FQ+ DD + R + K ED GK + P++ T S +
Sbjct: 211 IGIYFQIRDDYCNLRSKNYAANKGYAEDLTEGKFSFPIVHGVN--TDPNDRSLLSILQKR 268
Query: 261 KISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ A + R+ T ++ +D L L ++
Sbjct: 269 PSTPTLKDHAVSFLENRTRSFDYTRDVLQKLERQVRDELARLGGNA 314
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 91/314 (28%), Gaps = 43/314 (13%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + G KR P++ +A + AC
Sbjct: 62 IAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTAC 121
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +HTA+L+HDD +DD RRG+ + ++G ++L GD L + ++
Sbjct: 122 ALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPT 181
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ + I AA + L G
Sbjct: 182 GL-----------------------VPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPS 218
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
K YG + G + + L
Sbjct: 219 FVEFAQEKKYG--------------EMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLY 264
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-SSW 306
+ + K + E + + + A +AK L
Sbjct: 265 QVIDDVLEAKAMNKENEEKRRNGKSYVSLYG-IEKAMEVAEELRTQAKKELDGFAKYGDS 323
Query: 307 KKSLMEVVDFCLQR 320
L VD+ R
Sbjct: 324 VMPLYSFVDYAADR 337
>gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
Length = 311
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 67/333 (20%)
Query: 16 NFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+++ + +D + + +++ GGKRLRP+L + +A + +
Sbjct: 20 EQRLIEAL-ADAPLEGERTRPSHLMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAIT 78
Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E +H +L+HDD+ LRRG+ + +G +T++L GD LL+ AF ++
Sbjct: 79 AAAALECVHCYSLIHDDLPAMDNDLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGE 138
Query: 125 KSQEALEAL---------------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ + + L + S ++E D + KT
Sbjct: 139 DAHPDAQVRIALVRLLARASGIGGMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKT 198
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A +E+ +L+ G R AL +YG LG+AFQ+ DD+LD G+ +GK++G+D
Sbjct: 199 GALLRAGVEMGALLGGADAEARAALAAYGTALGVAFQIADDILDIEGDAAALGKSVGKDA 258
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T + +
Sbjct: 259 QAGKAT--------------------------------------LVSALGMERARALLAD 280
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A +L L EV F R N
Sbjct: 281 LVAEAGGALAPFGAQGA--VLAEVARFVATRQN 311
>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 289
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 19/290 (6%)
Query: 7 LTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNH 64
+ ++++ + V E + V Y + +GGKR+RP+L L H
Sbjct: 1 MVASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAH 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVGDFLLS 115
+A +E IHT +L+HDD+ + + L L+
Sbjct: 61 YQVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
Q + + + + G++ ++ ++T E + +KT L +
Sbjct: 121 QVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEG-QNLTLEQLQAIHANKTGKLLTF 179
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ LIAG + V L+ G +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTTTFEEIGKTPQKDVLAEKST 239
Query: 236 LPVIL-------AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
P ++ + + N S E +K+ +R N
Sbjct: 240 YPALMGLEASKVFLEDSLNQAINELDQVAKQVPFSTEKIKEIIESLRING 289
>gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415]
gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415]
Length = 288
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 110/285 (38%), Gaps = 20/285 (7%)
Query: 12 MEKVNFLILKRI-CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68
+EK++ + + S V + + + Y + +GGKR+RP+L L T H +A
Sbjct: 4 LEKIDAALKEFYEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELTKAHYQVA 63
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFC 119
A+E IHT +L+HDD+ + + L L++Q
Sbjct: 64 AALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYGLIAQTDL 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + + + G++ + + +T + + KT L + +
Sbjct: 124 HPSIALALIADLSQASGSFGMVAGQMLDIEGEE-QTLTLDQVYTIHSHKTGKLLAFPFKA 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP-- 237
+ L+A +++ L+ G+ +G AFQ+ DD+LD E+GK +D K T P
Sbjct: 183 AGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDVTASFEELGKTPQKDVAAQKATYPSL 242
Query: 238 -----VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + D + E + K +R +
Sbjct: 243 LGLEQSYSILNDSLDKAGAIFHKLEVDRDFNPEKILKILERLRLH 287
>gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 289
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 13 EKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-HVL 66
+++ + + + ++ + ++Y +F GG R+RP L L+ A V
Sbjct: 5 QRIEMALDRAVAHAEAPGAPPLLAEALRYAVFPGGHRIRPRLCLSVARACGDDDPAGSVA 64
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIEF+H A+L+HDD DD+ +RR K + + +G +VL GD L+ AF
Sbjct: 65 AAAAIEFLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLAFE 119
>gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45]
gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45]
Length = 289
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/330 (22%), Positives = 115/330 (34%), Gaps = 51/330 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M D V I + + + + ++Y GGK LR L L A +
Sbjct: 1 MFRDSLATGASAVAAHFDHVIGALATLPVTEAMRYAT-VGGKGLRGWLVLEGARLHGVPQ 59
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ ACAIE IH +L+H +DD LRRG W T+VL GD L + F
Sbjct: 60 AQALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQALGFE 119
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAVL 172
+V + + + + +LA + + + + +
Sbjct: 120 LVADPRCHPDAGVRADLTLSLARAAGARGMVLGQALDMAAETADTPLTLDEITALQAGKT 179
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
+ + A + + L SY LG+AFQ+ DD+LD G+ +GK +G+D G
Sbjct: 180 GALITWSAEAGARLAQADPGPLTSYADRLGLAFQIADDILDVEGDAETVGKAVGKDAGRG 239
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T +L L + RA +
Sbjct: 240 KATFVSLL--------------------------------------GLDQAKTRAETLVT 261
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+A D+L P +L E F + R N
Sbjct: 262 EACDALS--PYGERADTLREAARFVISRRN 289
>gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
Length = 298
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 126/334 (37%), Gaps = 51/334 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + + K + S E I ++Y + +GGKRLRP L T +L
Sbjct: 3 SDFQVYLKEKTNFFETELKKELKELSYPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQ 62
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
V A IE IH+ +L+HDD+ D+ RRGK+ V+G ++L+GD LL+ A
Sbjct: 63 DIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYA 122
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK---------SK 168
F M+ E + + + E I K
Sbjct: 123 FYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLETLKYIHKHK 182
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L +E++ +IA V R L+ Y +G+AFQ+ DD+LD G ++GK +G D
Sbjct: 183 TGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEDLGKPVGSD 242
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K T P IL + +++
Sbjct: 243 DDLHKATYPSIL--------------------------------------GMEESKKILN 264
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
++AK + + K L+ + DF +R +
Sbjct: 265 ETVERAKKIIHNMFGEEKGKILISLADFIRERKS 298
>gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948]
gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765]
gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132]
gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754]
gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948]
gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765]
gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754]
gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01]
gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131]
gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189]
Length = 293
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 288
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 5 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 64
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 65 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 125 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 ADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 241 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 267 IDEQFNTKHLLEIVDLFYSRDH 288
>gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 536
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 81/363 (22%), Positives = 143/363 (39%), Gaps = 67/363 (18%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPM-----------L----- 49
D+E ++ +L + S + V +YL+ + GKR RP+ L
Sbjct: 132 AFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAPGKRFRPVLLLILRQALLSLNVTSR 191
Query: 50 -----------------------TLATALMLEYRGDNH------VLLACAIEFIHTATLL 80
L+ + + + E IHTA+L+
Sbjct: 192 SEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQTRRKDGLELCMVHVAELIHTASLM 251
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + +S V +L
Sbjct: 252 HDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESL 311
Query: 141 AEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVLFSAALEVSS 181
+GEL Q D+ E YL KTA L + + +
Sbjct: 312 VKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTASLIAESCACLA 371
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL- 240
++ G+ + +G +G+AFQL DD LD+ +GK D R+G T P+++
Sbjct: 372 ILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSGLVTAPLLMA 431
Query: 241 --AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ ++ + +++KA ++ + A+ ++ Y ++A + L
Sbjct: 432 ALEEEARGASAGGEARTILERRADREGDVEKAIKLIFASDAMPRSQLMGRLYVRRATELL 491
Query: 299 RCL 301
L
Sbjct: 492 EEL 494
>gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina
98AG31]
Length = 366
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 110/299 (36%), Gaps = 10/299 (3%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S+ +++ + YL GK +R M+ A L+ ++ + +HTA+LL DDV
Sbjct: 59 SNEQILLEPYTYLTNIPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLHTASLLMDDV 118
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC------MVIETKSQEALEALSLVAC 138
DDS LRRG ++G ++ +++ A+ + + + L +L
Sbjct: 119 EDDSDLRRGVPVTHKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDATTDLWSLVNDEL 178
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
++ + ++ + + +IA
Sbjct: 179 LQLHRGQGMDLYWRDSLTCPTEEEYLQMVNNKTGGLFRIAIKLMIALSPIPETPDYLPLV 238
Query: 199 MNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257
+GI FQ+ DD+L+ K ED GK + P++ + + + + + +
Sbjct: 239 NLVGIIFQIRDDLLNLSSVVGYTKNKGFCEDLTEGKFSFPIVHSIR--SDSTNHQLMNIL 296
Query: 258 NDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ A M+ ++L T ++A + + L + +S+ E++
Sbjct: 297 RQKPTDIGTKAFAVSYMKDRTKSLEYTRGVLICLEEQAIEEVTRLGGNPALESIFELMH 355
>gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 536
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 81/363 (22%), Positives = 143/363 (39%), Gaps = 67/363 (18%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPM-----------L----- 49
D+E ++ +L + S + V +YL+ + GKR RP+ L
Sbjct: 132 AFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAPGKRFRPVLLLILRQALLSLNVTSR 191
Query: 50 -----------------------TLATALMLEYRGDNH------VLLACAIEFIHTATLL 80
L+ + + + E IHTA+L+
Sbjct: 192 SEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQTRRKDGLELCMVHVAELIHTASLM 251
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + +S V +L
Sbjct: 252 HDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESL 311
Query: 141 AEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVLFSAALEVSS 181
+GEL Q D+ E YL KTA L + + +
Sbjct: 312 VKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTASLIAESCACLA 371
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL- 240
++ G+ + +G +G+AFQL DD LD+ +GK D R+G T P+++
Sbjct: 372 ILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSGLVTAPLLMA 431
Query: 241 --AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ ++ + +++KA ++ + A+ ++ Y ++A + L
Sbjct: 432 ALEEEARGASAGGEARTILERRADREGDVEKAIKLIFASDAMPRSQLMGRLYVRRATELL 491
Query: 299 RCL 301
L
Sbjct: 492 EEL 494
>gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus
N315]
gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu3]
gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781]
gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763]
gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719]
gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299]
gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115]
gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300]
gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224]
gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937]
gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117]
gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102]
gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819]
gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1]
gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796]
gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315]
gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781]
gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763]
gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719]
gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299]
gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115]
gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300]
gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224]
gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937]
gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102]
gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117]
gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus aureus 04-02981]
gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819]
gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796]
gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172]
gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193]
Length = 293
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + V A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
Length = 340
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 17/300 (5%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLI---FSGGK-----RL-RPMLTLATALMLEYRG---- 61
V + +++ S I + +GGK ++ R L A M++
Sbjct: 17 VEDRVRQQVDSLPPAIRGPACHHFGIREAGGKSPGMGKIARSRLCAELASMVDGPHVTIP 76
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ + A AIE IH L+HDD++D RRG+ A + +G ++L+GD LL+ A +
Sbjct: 77 RERAITAATAIEMIHNFGLIHDDIMDQDEERRGRKAVWVAYGTGMAILLGDILLATAVKI 136
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + L EG+L + N+ T E+ + + KTA LF A
Sbjct: 137 AASVGNTRIADIFNQAIGKLIEGQLLDM--GSNIGTTLEELWGIAEKKTASLFELAAMSI 194
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ +A V +A++S+ + G+AFQ ++D + + D +N + TLP +L
Sbjct: 195 AELACVTQRQGEAMESFSRHYGVAFQYMNDAASFFAGNSHD-PRALSDIKNRRATLPAVL 253
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q +D ++ + +R + + A+++L
Sbjct: 254 LVQNALPGSDALIAHFSDDQPLTGGAAYEIMRALRSDAVRDMARQAVLQELEMAQNALSA 313
>gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
gondii ME49]
gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
gondii ME49]
Length = 536
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 81/363 (22%), Positives = 143/363 (39%), Gaps = 67/363 (18%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPM-----------L----- 49
D+E ++ +L + S + V +YL+ + GKR RP+ L
Sbjct: 132 AFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAPGKRFRPVLLLILRQALLSLNVTSR 191
Query: 50 -----------------------TLATALMLEYRGDNH------VLLACAIEFIHTATLL 80
L+ + + + E IHTA+L+
Sbjct: 192 SEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQTRRKDGLELCMVHVAELIHTASLM 251
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + +S V +L
Sbjct: 252 HDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESL 311
Query: 141 AEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVLFSAALEVSS 181
+GEL Q D+ E YL KTA L + + +
Sbjct: 312 VKGELIQALSDSRGDLGERQAESTEPLREHLKRKSALRTYLTKTYHKTASLIAESCACLA 371
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL- 240
++ G+ + +G +G+AFQL DD LD+ +GK D R+G T P+++
Sbjct: 372 ILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSGLVTAPLLMA 431
Query: 241 --AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ ++ + +++KA ++ + A+ ++ Y ++A + L
Sbjct: 432 ALEEEARGASAGGEARTILERRADREGDVEKAIKLIFASDAMPRSQLMGRLYVRRATELL 491
Query: 299 RCL 301
L
Sbjct: 492 EEL 494
>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
Length = 289
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 19/290 (6%)
Query: 7 LTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNH 64
+ ++++ + V E + V Y + +GGKR+RP+L L H
Sbjct: 1 MVASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAH 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVGDFLLS 115
+A +E IHT +L+HDD+ + + L L+
Sbjct: 61 YQVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
Q + + + + G++ ++ ++T E + +KT L +
Sbjct: 121 QVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEG-QNLTLEQLQAIHANKTGKLLTF 179
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ LIAG + V L+ G +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKST 239
Query: 236 LPVIL-------AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
P ++ + + N S E +K+ +R N
Sbjct: 240 YPALMGLEASKVFLEDSLNQAINELDQVAKQVPFSTEKIKEIIESLRING 289
>gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase
Length = 343
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/313 (18%), Positives = 124/313 (39%), Gaps = 9/313 (2%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
D ++VN + +++ Y+ GK +R +L L+ ++ ++
Sbjct: 39 DTKEVN--FDHWTSTKEKVVTGPYDYIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQV 96
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+ +HTA+LL DD+ D+S LRRGK A+ ++G ++ +++ A + K+
Sbjct: 97 VRMLHTASLLIDDIQDNSELRRGKPVAQNIFGTALTINSANYVYFLALEKLNSLKNPNIT 156
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + L G+ L L E+ + + + + ++S+
Sbjct: 157 DIFTEELLRLHRGQAMDLYWRDTLTCPTEEEYFEMVANKTGGL---FRLMYRMMKAESSM 213
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L LG+ FQ+VDD + K GED GK + PVI + + +
Sbjct: 214 PIDLLPVVELLGVIFQVVDDYKNLCSREYGKLKGFGEDLTEGKFSFPVIHSIRSNPED-- 271
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KS 309
+ + A IM +L T++ + + ++ + + + K
Sbjct: 272 LQLLHVLQQKSSNEHVKLYAIEIMESTGSLEYTKHVVENIVSQIQEIIYSTDEGQGRGKG 331
Query: 310 LMEVVDFCLQRLN 322
+++++ + RL+
Sbjct: 332 ILDLLHK-ITRLS 343
>gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87]
gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87]
Length = 288
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+E+VN + + I + + + Y + +GGKR+RP+L L T ML + A
Sbjct: 5 IEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGLQSAL 64
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+H +DD RRGK+ V+G ++L GD LL++AF +V
Sbjct: 65 ALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDLI 124
Query: 128 EALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + ++ + S+N V + + K+KT L + A+ +
Sbjct: 125 EDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA V L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T +
Sbjct: 185 VDIAQVDQKTSHNLNEFSEHLGLMFQIKDDLLDVYGDEKKIGKAVGSDESNNKSTYVSLF 244
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
E + + +A L
Sbjct: 245 --------------------------------------GKEGAEDKLEYHKNQALKCLNN 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ L+++VD R +
Sbjct: 267 ISSQYQTSELIKIVDLFYNRDH 288
>gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 289
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 10 KDMEKVNFLILKR-ICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ ++N I + SDV + + + Y + +GGKR+RP++ L + H
Sbjct: 2 DKLNEINQAIRRYYAQSDVVSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIELTEGHF 61
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 62 DVAAALEMIHTGSLIH 77
>gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 288
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/329 (21%), Positives = 114/329 (34%), Gaps = 50/329 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
M + +D + + + + I + + GGKRLR L L +A + +
Sbjct: 1 MFHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTTE-GGKRLRGFLVLESARLHDVDE 59
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE +H +L+H +DD LRRG+ A + W T+VL GD L S AF
Sbjct: 60 ARAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFE 119
Query: 120 MVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLF 173
+ + A + A L Q + L I +
Sbjct: 120 LCTRPEVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTG 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ ++ A + + L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK
Sbjct: 180 ALIEWAAAAGAVLAGADPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGK 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L L + RA +
Sbjct: 240 ATFVSLL--------------------------------------GLDAAKARARDLVDQ 261
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L +L E F + R N
Sbjct: 262 GCAALDGY--GERAGTLKEAARFVIARDN 288
>gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
Length = 303
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + ++ + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASVVARTEVALERALPAETVSPQRLHAAMRYATLGAGKRVRPLLAHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + ++CA+E IH +L+H +DD LRRG+ + T++LVGD L +
Sbjct: 61 DASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGDALQT 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSK 168
QAF ++ E + L+ + ++ + +D+ +++ + + K
Sbjct: 121 QAFIVLAEQGAVRPATRAVLMGELARASGSQGMAGGQAIDLQSVGIALSQDELEAMHRMK 180
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A+L + +L A V + + + +Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 181 TGALLRASLRMGALCAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTADTATLGKTAGKD 240
Query: 229 FRNGKPTLP 237
N KPT
Sbjct: 241 EANDKPTYV 249
>gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057]
Length = 291
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVKAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED ++ +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S E +++ +R N
Sbjct: 257 QTLDEAVLILSDLEEKTEFSGEEIQQIIESLRMNG 291
>gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg]
gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg]
Length = 335
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/331 (13%), Positives = 96/331 (29%), Gaps = 16/331 (4%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+E+ + E ++ + + + I D + Y + +GGKR+RP++ L T L+
Sbjct: 6 NIEEKLHQKAETFAQMMTAYLPKEQGQQKTIFDALSYSLLAGGKRIRPIILLETYQALKE 65
Query: 60 RGD----NHVLLACAIEFI-HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ L E + DD+V ++ + + + + D
Sbjct: 66 QEKGGALRASQLDIINENADFSWFKTLDDIVTKFSVALEMIHTYSLVHDDLPAMDNDEYR 125
Query: 115 -----SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ A + + +T D +
Sbjct: 126 RGKLTTHAKYGEDMGILAGDALLNGAFELVAEAFANIKDIENSTDAITLYDRVSRAYQML 185
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ + + V+ + K + + + G N E
Sbjct: 186 SSRSGMYGMIGGQVVDVERTGSVLSKEELLFIYELKTGALLEASFLIGAILSGANQEELI 245
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
R K V LAFQ + I+ + + + + D++
Sbjct: 246 RFTKIAKKVGLAFQIQDDILDVTSTMEVLGKPINSDEKNQKTTYVTLYG-IEDSKKEVER 304
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++A + L+ L L E+V + + R
Sbjct: 305 LSKEAMEELKALK--LENSFLTELVSYLVNR 333
>gi|195011823|ref|XP_001983336.1| GH15641 [Drosophila grimshawi]
gi|193896818|gb|EDV95684.1| GH15641 [Drosophila grimshawi]
Length = 445
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/363 (12%), Positives = 99/363 (27%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 83 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 136
Query: 56 MLE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ LA E I + L+H+ VV+ +
Sbjct: 137 AAGHAASIPDAEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTDAGQDVNTYD 196
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 197 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 256
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + A + + ++ A G + + +
Sbjct: 257 FKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLK 316
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKP-------------TLPVILAFQRGTKREKNFW 253
L + + GK++ ++ T ++ A
Sbjct: 317 LAGQSEEMQRHAYRFGKHLALAWQACLDAESFQCPTLPLDVTFSLVSAPVLFHLEHDPNL 376
Query: 254 KSTINDGKISVE--NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + GK SVE + + + AL T+ + A + L+ P + +++L
Sbjct: 377 YALLEPGKKSVELIDYDRIHKAIVAGPALAKTKALQTKHTAAALNVLQHFPATDARQALE 436
Query: 312 EVV 314
++
Sbjct: 437 NII 439
>gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus capitis SK14]
gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus capitis SK14]
Length = 288
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+E+VN + + I + + + Y + +GGKR+RP+L L T ML A
Sbjct: 5 IEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGFQSAL 64
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+H +DD RRGK+ V+G ++L GD LL++AF +V
Sbjct: 65 ALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDLI 124
Query: 128 EALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + ++ + S+N V + + K+KT L + A+ +
Sbjct: 125 EDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
IA V L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 VDIAQVDQKTSHNLNEFSKHLGLMFQIKDDLLDVYGDEKKIGKAVGSDESNNKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ + A E + + +A + L
Sbjct: 241 ------------------------------VSLLGKEGA----EDKLEYHKNQALECLNN 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ L+++VD R +
Sbjct: 267 ISSQYQTSELIKIVDLFYNRDH 288
>gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2]
gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
Length = 293
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 288
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 5 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 64
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 65 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 125 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 241 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 267 IDEQFNTKHLLEIVDLFYSRDH 288
>gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087]
Length = 291
Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVKAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED ++ +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S E ++K +R N
Sbjct: 257 QTLDEAVLILSDLEEKTEFSGEEIQKIIESLRLNG 291
>gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424]
gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424]
Length = 286
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/329 (18%), Positives = 117/329 (35%), Gaps = 54/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + ++ + +N K I E++ + Y + + GK++RP+ L
Sbjct: 1 MNKFQVFIDENKDILNDFAKKYIEKTDMPELLKKSISYSLVNDGKKIRPLSFLYLLKYYG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ +A AIE +HT +L+HDD+ + R GK+ V+G +VL GD +L+
Sbjct: 61 EDFAEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTL 120
Query: 117 AFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
AF ++ + + + + + + + + + DYL + S
Sbjct: 121 AFEVLSNSNIKPDLKVKLISQFANYSGAMGMIAGQIYDIKQKEYEVNADYLRRMHSLKTG 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + + S+G LGIA+Q+ DD+LDY G+ +GK
Sbjct: 181 KLIELPLDFACQIAGKVEELSDINSFGKELGIAYQIKDDILDYYGDFENIGKLP------ 234
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
S E++ + E +
Sbjct: 235 -------------------------------SDEDMITYLSFY----GIEQCEELLEKHT 259
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + R L + L + ++ L+R
Sbjct: 260 TSAIEIARKLKNCE----LEDFSNYLLKR 284
>gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus]
Length = 310
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 12 MEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
M ++ + + ++ + +++ +F GG R+RP L +A A+
Sbjct: 4 MTRIEQALEAALVANEGAGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALAD 63
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A AIE IH A+L+HDD DD+ RRG+ + +G + +VL GD L+ AF +
Sbjct: 64 AAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGA 123
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ ++ E + + A + ++
Sbjct: 124 AGGRHPERMAHVLQTVARGVGTPLGIIAGQAWECEPRV-ALSDYQRAKTGALFAAATAAG 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + ++ G LG A+Q+ DDV D + ++GK +G D G+P+ +
Sbjct: 183 AQASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGKPVGRDVALGRPSAAIQHGLV 242
Query: 244 RGTKRE 249
+
Sbjct: 243 GAVEHF 248
>gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus]
Length = 310
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 12 MEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
M ++ + + ++ + +++ +F GG R+RP L +A A+
Sbjct: 4 MTRIEQALEAALVANEGAGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALAD 63
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A AIE IH A+L+HDD DD+ RRG+ + +G + +VL GD L+ AF +
Sbjct: 64 AAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGA 123
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ ++ ++ E + + A + ++
Sbjct: 124 AGGRHPERMAHVLQTVARGVGTPLGIIAGQAWECEPRV-ALSDYQRAKTGALFAAATAAG 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
A + ++ G LG A+Q+ DDV D + ++GK +G D G+P+ +
Sbjct: 183 AQASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGKPVGRDVALGRPSAAIQHGLV 242
Query: 244 RGTKRE 249
+
Sbjct: 243 GAVEHF 248
>gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis 3_1_12]
Length = 276
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
+ + + A AIE H TLLHDD++D + +RRGK VW + T++L GD
Sbjct: 1 MAYNLYKEDVTSVYDPATAIEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGD 60
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
++ A+ + S+ E + L + T + EG+ + DV EE+YL +I+ K
Sbjct: 61 AMMVLAYQYMASCSSEYLKEVMDLFSLTALEICEGQQMDMGFESRDDVKEEEYLEMIRLK 120
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TAVL +A+L++ +++ G + L +GM +G+AFQL DD+LD G+ GKNIG D
Sbjct: 121 TAVLLAASLKIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSAVFGKNIGGD 180
Query: 229 FRNGKPTLPVILAFQRGTKREKNF-WKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
K T +I A +R + + + + + E + + + E +
Sbjct: 181 ILCNKKTYMLIKALERADRNQLDELNRWLNATLFCAEEKISAVTELYNQIGIKAVCENKM 240
Query: 288 YSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQR 320
Y +A SL + +KS L +++ + R
Sbjct: 241 REYYTRAMTSLGAVSVIEDRKSELKKLMKHLMYR 274
>gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 296
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 43/294 (14%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDV 84
+ + + I + GK +RP L L A L + +L A ++E IHTA+LL DD+
Sbjct: 38 PDRLLKATYHYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIHTASLLQDDI 97
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+D +RRG ++G+ T++L D ++++A I + + + L + LA G+
Sbjct: 98 MDQQRIRRGVETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFELLNSSIKLAVGQ 157
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV-SSLIAGVQNSVRQALKSYGMNLGI 203
+ LS + T +DYL +I KTA L +++ V + + N V ++ G +GI
Sbjct: 158 SLESELSGRDNTTIDDYLKLIYYKTASLIESSMIVGAYSVNVKDNEVISRIRDIGRFVGI 217
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DDV+D + + G ++ ++ +
Sbjct: 218 AFQVRDDVID----------------------YLNMDSKNPGVNYDEINIVRIMSRDNGN 255
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+E+ A+ A D++R D+ ++++
Sbjct: 256 IED------------AISKARNLLNDMLDNAIDAIRKTMDNEI------LINYI 291
>gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122]
gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635]
gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122]
gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635]
Length = 293
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELMQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
Length = 294
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 71/313 (22%), Positives = 115/313 (36%), Gaps = 48/313 (15%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+I ++ +PD + Y GGK LR L + TA + A AIE IH
Sbjct: 23 QMIEAQLSDLSGPVPDAMIYA-ARGGKALRAFLAIETARLHGVPPQVAAHAAAAIECIHA 81
Query: 77 ATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-----MVIETKSQEA 129
+L+H +DD LRRG+ W T+VL GD L + AF + +
Sbjct: 82 YSLIHDDLPCMDDDDLRRGQPTVHKRWDEATAVLAGDALQALAFELLGRLDCADAAKLDL 141
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+L+ A + ++ +I + + + + + +
Sbjct: 142 TLSLAQAAGVRGMVGGQAADIAAETADVPLTLDQIIALQAGKTGALMSWAALVGPRMALA 201
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ AL+ YG LG+AFQ+ DDVLD G+ +GK +G+D GK T +L
Sbjct: 202 DQAALRLYGDCLGLAFQIADDVLDVTGDAALVGKALGKDAAAGKATFVSLL--------- 252
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
L + RA +A D+L D + ++
Sbjct: 253 -----------------------------GLDGAKRRAVDLVTQACDALSDYGDDA--ET 281
Query: 310 LMEVVDFCLQRLN 322
L + F R +
Sbjct: 282 LKDAARFVTARTH 294
>gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
Length = 294
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/306 (22%), Positives = 116/306 (37%), Gaps = 52/306 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + ++Y + GGKR RP L T ML + A A+E IH +L+HDD+
Sbjct: 29 PLIEAMRYGLLLGGKRARPYLVYITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMD 88
Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136
LRRGK + + T++L GD L + AF + + + A +
Sbjct: 89 DDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAMIQALAEASG 148
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
A + G+ L+ L EE A++ A + ++ L
Sbjct: 149 AQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDR 208
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y +G+AFQ+ DD+LD + +GK G D + K T P +L
Sbjct: 209 YADAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALL---------------- 252
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
L + +A++ Q+A +L +P + + L E +
Sbjct: 253 ----------------------GLKGAQEKAHTLLQEALLALEAIPYN--TEHLEEFARY 288
Query: 317 CLQRLN 322
++R N
Sbjct: 289 VVERKN 294
>gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
18224]
gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
18224]
Length = 396
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/308 (17%), Positives = 109/308 (35%), Gaps = 19/308 (6%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+I Y+ GK +R + A L+ + ++ + +H A+LL DDV
Sbjct: 88 KESIIMGPYDYISKQPGKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNASLLIDDVE 147
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + S A+E + L +G+
Sbjct: 148 DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTEELLNLHKGQG 207
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L E+ + ++ + ++ + LG+ F
Sbjct: 208 MDLFWRDTLTCPTEEEYLEMVDNKTGGL---FRLAVKLMQAESEAGKDCVPLVNILGLIF 264
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ + K + ED GK + P+I + + + + E
Sbjct: 265 QICDDYLNLSDKTYNKNKGLCEDLTEGKFSFPIIHSIRA--DPSNVQLINILKQRTKDEE 322
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP---------DSS-----WKKSLM 311
A M + T+ KA + + D ++ L
Sbjct: 323 VKLYAVNYMERTGSFAYTKKVVSQLRDKASKLIDEMDGISEGTEAVDGPRDGRYVREILA 382
Query: 312 EVVDFCLQ 319
++V+ L+
Sbjct: 383 KIVEMTLK 390
>gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti
R7A]
Length = 324
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 14 KVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V + + +C++ + + ++Y GGKR R +L LAT + + + A
Sbjct: 35 RVEQALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLATGALADTPAPMLDDVGAA 94
Query: 71 IEFIHTATLLHDDVVDDSA 89
IE +H TL+HDD+
Sbjct: 95 IEMMHACTLVHDDLPAMDD 113
>gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni]
gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma
mansoni]
Length = 338
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 107/299 (35%), Gaps = 8/299 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ +++ + Y+ + GK +R L A L+ +++ I+ +H A+L+ DD
Sbjct: 12 KTAEKVVMEPYSYICSTNGKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLIIDD 71
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRGK A ++G S+ ++ A + + E ++ + L G
Sbjct: 72 IEDGSHLRRGKPTAHCIFGVAPSINSANYAYFLALEKLSLLERPETVKIFTEQMLVLHRG 131
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + + E + + + + + + K +G+
Sbjct: 132 QGMDIFWRSSFKCPSESEYEAMVLCKTGGLFSLG---VRLMQLFSENQTDYKPLLDAIGL 188
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+Q+ DD + K ED GK + P++ A N + ++ +
Sbjct: 189 FYQIRDDYANLVDSSYHRKKTFAEDLTEGKFSYPIVRAINDYPDD--NQVMNILSQHTTN 246
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRL 321
M E AL T + ++ + ++ + + ++ D L R
Sbjct: 247 SSLKLYCVKHMLELGALEQTVLKLAKLEERCSQLIVKYGNNPLLSEVIQKLTD--LHRT 303
>gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
ATCC 6940]
gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
ATCC 6940]
Length = 363
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 68/350 (19%), Positives = 126/350 (36%), Gaps = 42/350 (12%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFS----------GGKRLRPMLT---LATALML 57
D+ + + + + + ++ + ++ + GGKR+RP A L
Sbjct: 14 DLAR--EKLSEFLAQRRPEVAEIGEPVVNATNFLESFVLDGGKRIRPTYAWAGFLGAHGL 71
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------- 105
A ++EFI L+HDD++D S RRG Q
Sbjct: 72 ESGEDAQAMATAASSLEFIQACALIHDDIIDSSDTRRGNPTVHRAVAAQHRAKGYHGDAD 131
Query: 106 ------SVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELRQLSLSKN 153
++LVGD L+ A M+ + + + + L +
Sbjct: 132 FFGQSVAILVGDLALAWAEDMLQGSGLSGAALHRARGPWSGMRTEVIGGQILDISLEAAG 191
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
+ A L + + +AG + ++ A + YG ++GIAFQL DD L
Sbjct: 192 SEDLALANSVNRYKTAAYTIERPLHLGAAVAGAEPALIDAFRGYGRDIGIAFQLRDDQLG 251
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAF 271
G+ GK G+D R GK T+ + LA Q ++ K+ + ++ +
Sbjct: 252 VFGDPAITGKPAGDDLREGKRTVLLSLALQHADAKDPAAAKTLRSLIGNSEDPADIARMA 311
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
I+ ++ A E + + + LR D+ ++L + R
Sbjct: 312 QIIEDSGAPALLEEQITALTESGLRHLREAQVDTDVTQTLEALAIKATAR 361
>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
Length = 289
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 19/290 (6%)
Query: 7 LTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNH 64
+ ++++ + V E + V Y + +GGKR+RP+L L H
Sbjct: 1 MVASKLQRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAH 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVGDFLLS 115
+A +E IHT +L+HDD+ + + L L+
Sbjct: 61 YQVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA 120
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
Q + + + + G++ ++ ++T E + +KT L +
Sbjct: 121 QVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEG-QNLTLEQLQAIHANKTGKLLTF 179
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ LIAG + V L+ G +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKST 239
Query: 236 LPVIL-------AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
P ++ + + N S E +K+ +R N
Sbjct: 240 YPALMGLEASKVFLEDSLNQAINELDQVAKQVPFSTEKIKEIIESLRING 289
>gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 305
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/308 (16%), Positives = 109/308 (35%), Gaps = 19/308 (6%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ ++N ++ + S +I V+Y++ + K +RP L +A++ + + + +A A+
Sbjct: 11 ITEINKILPE--DSQNRLIS-AVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAV 67
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IHT +L+HDD +D+S RRG+++ + T+VL GD LL+ AF ++
Sbjct: 68 ECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSN 127
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ A + A G + T + L
Sbjct: 128 KRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQL------- 180
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ G I + + G T A
Sbjct: 181 -CNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNL 239
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+++ + + + ++ ++ + E + ++A D+L L S
Sbjct: 240 GLIFQAKDDIRDYKQDEVNNLMSMLSKS----EIENYIDNLFKQALDNLGEL--SGDTNY 293
Query: 310 LMEVVDFC 317
L +++
Sbjct: 294 LYNLLNQV 301
>gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B]
gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str.
Eklund 17B]
Length = 289
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L+++ + ++ N+ I + S +++ + Y + GGKR+RP+L + T + +
Sbjct: 3 IDNLKNVIDEYLK--NYFINR--NSYNKVVYESAGYSVNIGGKRIRPILLILTYSLYKDN 58
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + +A AIE IHT +L+H +DD LRRGK V+G +VL GD LL++A
Sbjct: 59 IEKIMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAM 118
Score = 39.9 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 13/44 (29%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L E + L L S L E+ L RLN
Sbjct: 248 GLEKCEELCKMLTDECIKILDNL--SVDASLLKELTHNLLNRLN 289
>gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens
ATCC 23877]
Length = 347
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 21/332 (6%)
Query: 12 MEKVNFLILKRICSDVEMIPDV----VKYL-------------IFSGGKRLRPMLTLATA 54
++ V+ ++ + + VE +P +Y + GGK +RP L L +A
Sbjct: 16 LQWVDDVLSPALRAAVESLPAAESLVARYHRGWCEADGAPRASVSGGGKAVRPALALLSA 75
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + V A A+E +H TLLHDDV+D ALRR + AA ++G +VL GD LL
Sbjct: 76 VAVGADPAAAVPGAVAVELVHDFTLLHDDVIDGDALRRHQPAAWSLFGTPAAVLTGDALL 135
Query: 115 SQAFCMVIETKSQEALEALSLVAC---TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
A + + + A A+ + L EG+ ++ K DV+ DYL + KT
Sbjct: 136 VAALRALTQASPRRAGAAVQELVAALLELVEGQSHDVAFEKAHDVSVADYLTMAAGKTGA 195
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A + ++AG L+ +G +LG+AFQ DD+L G GK +G D
Sbjct: 196 LIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCADDILGIWGRSARSGKPVGADLAA 255
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K +LPV+ A + + + ++ ++ A +++ E E A
Sbjct: 256 RKKSLPVVAALAAPGPAAERLRELYRSPHPLAGGDIDLARLLVEEAGGRRAAEEEARRQM 315
Query: 292 QKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
A SL P + + L ++ +R +
Sbjct: 316 TVALRSLSLAQPTADAYRQLHDIAWAMTRRES 347
>gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
Length = 283
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 7/240 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ +L + + + + +++ ++Y IFS GK +RP L A A M +
Sbjct: 12 NISELMKHYSSLLIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNV 71
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + ++ A+E IH +L+HDD+ +RRG+ ++ + ++L GD LL+ AF
Sbjct: 72 DRTLPVSAAVEIIHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFE 131
Query: 120 MVIETKSQEALEALSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
++ + + A Q+ ++ + + ++ KTA FSA
Sbjct: 132 ILSTINESPLIRCRIIKTLAHAIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSA 191
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
E+ ++ N AL +YG+NLG AFQ+ DD+ D + ++ + ++ K
Sbjct: 192 ICELGGILGNASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSKNNILNIINNKDAKNY 251
>gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Ralstonia solanacearum PSI07]
gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Ralstonia solanacearum PSI07]
Length = 299
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASVVARTESALERALPGEPVAPQRLHAAMRYASLGAGKRVRPLLVHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E D ++CA+E IH +L+H
Sbjct: 61 EASPDALDGVSCAVEMIHAYSLVH 84
>gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 351
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 101/280 (36%), Gaps = 19/280 (6%)
Query: 42 GKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-- 98
GKRLR D V A ++E IH A ++HDD++DDSALR G+ A
Sbjct: 51 GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIA 110
Query: 99 ----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
+ +L+G + A +++ L
Sbjct: 111 LRGAVRRRPRSVAAARSLAMLVGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIA 170
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
GE ++ + T + L + +AG + + +YG+ LG
Sbjct: 171 GECLEILRTGAEPDTAASLKVIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLG 230
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
AFQL DD+L G+ GK +D +PT + ++ +++ +S + +
Sbjct: 231 EAFQLRDDLLGLFGDPGRTGKANADDVCGHRPTALLAETWRVAGDDDRDRLRSLLGRRDL 290
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ L +MR + E + +A +L L
Sbjct: 291 DEDGLNAVRAVMRRLKTPGLVEGMISARVDEALAALHELD 330
>gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60]
gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus CGS00]
Length = 293
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMNTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELMQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136]
Length = 589
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/328 (19%), Positives = 123/328 (37%), Gaps = 19/328 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L + + + + + + ++ + + G R RP LT+A+ L
Sbjct: 231 LNKLHEDVREWFTR--ESLDALLGKPHDRTEEIAREWLARAGNRWRPFLTVASYQALRED 288
Query: 61 GD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ + A A+E H A+L+HDD+ D+ A R G+ G ++ VGD L+
Sbjct: 289 PEGPLSDDLKKAAIAVECFHKASLVHDDIEDNDAQRYGEATLHAEHGMPVALNVGDLLIG 348
Query: 116 Q-----AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ A V L+ + L G+ +L + + + I
Sbjct: 349 EGYRLLADSNVRADYRTAMLKIAAEGQRELCRGQGAELLWNNHPVALSSTQVLEIFRSKT 408
Query: 171 VL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
F AL++ + ++G + V +AL Y LGIA+Q+ DD+ D +
Sbjct: 409 APAFEVALKIGAALSGRLDEVEEALHEYSEALGIAYQIHDDLDDLGDDSATDNTVAIRP- 467
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
++ + L +RG K+ + N + + A S
Sbjct: 468 -----SIVLALIRERGKGEIKDTMERLWNGELKESPDKATIRAWAESSTAHEKAMLLLES 522
Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
Y ++A SL+ + +++ K L V+
Sbjct: 523 YKEQAVRSLQGVDNANLKGLLRRVIGKI 550
>gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977]
gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus]
Length = 314
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 131/313 (41%), Gaps = 29/313 (9%)
Query: 38 IFSGGKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
+ GGKRLRP + D + + A+E +HT L+HDDV+D SA RRG
Sbjct: 1 MLRGGKRLRPAFAYWGWRAITDDPDPWNPEVLRVCAALELLHTCALIHDDVIDSSATRRG 60
Query: 94 KVAARLVWGNQT----------------SVLVGDFLLSQAFCMV-----IETKSQEALEA 132
+ + + ++L+GD L+ A MV A
Sbjct: 61 EPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVRARGV 120
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVR 191
S++ + G+ + + D + E L VI+ KTA L++ IAG +
Sbjct: 121 WSILRSEVLGGQYLDILSESSGDESVETALRVIRFKTAGYTVQRPLQLGVAIAGENAEIS 180
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ L G+++GIAFQL DDVL G+ GK G+D R+GK T+ + A + +R+
Sbjct: 181 RLLGDVGLDIGIAFQLRDDVLGVFGDPKVTGKPAGDDLRSGKRTVLLAEALRLARQRDSA 240
Query: 252 FWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKK 308
+ ++ + + + ++ + AL E R + +A D L +
Sbjct: 241 AEDLLHSWIGTPLTDQQVAEMCSLIVDLGALGAVESRIEEHTHRALDQLAGADIADDARA 300
Query: 309 SLMEVVDFCLQRL 321
+L ++V R
Sbjct: 301 ALSDLVRLVSNRS 313
>gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 269
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 19/237 (8%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDD 87
+ D +Y + +GGKR RP L L A L ++ D A +E+ HTA+L+ DD +D+
Sbjct: 7 LRDACEYALLNGGKRFRPALVLMIAKALGFQVD-VSQAALCVEYFHTASLIADDLPCMDN 65
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG---- 143
RR ++G TS+L L++ + + + A V
Sbjct: 66 DDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERLCVLAL 125
Query: 144 ------------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
Q +++ + VI+ KT LF + + + G
Sbjct: 126 ENATQNTGILGATGGQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGGGVLEKL 185
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+K + G+AFQ+ DD+ D + + + + +
Sbjct: 186 SLVKKCAGHFGMAFQIADDLGDMKQDSFHDHTMNFANVYGKPAATQLFHDEIHQFNQ 242
>gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
Length = 315
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 5 EDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L ++KV+ I + + D Y + +GGKR+RP +TL A L GD
Sbjct: 30 NSLLTAYVKKVDTAIENHLDLLGPPSPVRDACAYALSTGGKRVRPSITLMVADALGGMGD 89
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA 89
+ +IE+ HTA+L+ DD+
Sbjct: 90 VTLSAL-SIEYFHTASLVVDDMPSMDN 115
>gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
Length = 286
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/329 (17%), Positives = 115/329 (34%), Gaps = 54/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + +K+N + +++ + + Y + + GK++RP+ L
Sbjct: 1 MNNFKLFIETNKDKLNAFAKDYVEKLEMPDILKESITYSLVNDGKKIRPLSFLYLLKFYG 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ +A AIE +HT +L+HDD+ + R GK V+G +VL GD +L+
Sbjct: 61 IEYSKYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKYTNHKVYGQDVAVLTGDAMLTL 120
Query: 117 AFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
AF V ++ + + + + + + + DYL + S
Sbjct: 121 AFEVLSDADVKPDLKVRLIKQFANYSGAMGMIAGQIYDVKQKNYDVDADYLRKMHSLKTG 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + + +K +G LGIA+Q+ DD+LDY G+ ++GK
Sbjct: 181 RLIELPLDFACLVANKLEDYDDVKEFGQQLGIAYQIKDDILDYYGDFEKIGK---LPSDE 237
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
T + + E +
Sbjct: 238 DMITYLSFY--------------------------------------GIEECEELLKQHT 259
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + L ++ L + ++ L+R
Sbjct: 260 FNAITVAKRLNNN----LLEDFANYLLKR 284
>gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11]
gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46]
Length = 288
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 5 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 64
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 65 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 124
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 125 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 185 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 240
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 241 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELMQ 266
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 267 IDEQFNTKHLLEIVDLFYSRDH 288
>gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 294
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 89/310 (28%), Gaps = 33/310 (10%)
Query: 14 KVNF---LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N I++ + ++ +KY SGGKRLR L AT + +++ A
Sbjct: 13 RINKKLFEIIQELPFQDSVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALDVISAA 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H+ +L+HDD+ + + + +
Sbjct: 73 VELVHSYSLIHDDLP----------------------CIDNDYFRRGKISCHIKYGENFA 110
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
LA L ++ D + + ++ L +
Sbjct: 111 LLAGDALQGLAFNILSNSNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKIN 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
L+ + + + N K + ++ + Q K
Sbjct: 171 ISELEKINLYKTAFL-IRCSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLK 229
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
N K + + L ++ + ++A +L L + L
Sbjct: 230 NDIKKLESKRNKTKNTYPLLI-------GLKKSKIKIKELYKEAFFTLEILKKNFNVNIL 282
Query: 311 MEVVDFCLQR 320
+ F ++R
Sbjct: 283 KLLTQFIMKR 292
>gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus aureus subsp. aureus ST398]
Length = 293
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTKHELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELMQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 372
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 12/293 (4%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ ++YL+ GK +R L A L D ++ I+ +HTA+LL DD+ D
Sbjct: 75 EKIVSAPLEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLLIDDIQD 134
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRG A V+G ++ ++ + E A + L G+
Sbjct: 135 ASRLRRGHPVAHDVFGVAQTINAANYAYFLQQKRLNEINDPRAFHIFTQALLDLHIGQGM 194
Query: 147 QLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L + TE +Y ++ KT LF A+E+ + Q++ L LGI F
Sbjct: 195 DLYWRDALVCPTEAEYTRMVMYKTGGLFRLAVELMQI----QSTTTTDLSRLVGLLGIIF 250
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD ++ + + K + ED GK + PVI + + + + +
Sbjct: 251 QIRDDYMNLQSGIYAEKKGLMEDLTEGKFSYPVIHSIR--ADPDNTQLINILKQRSEDRA 308
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAK---DSLRCL--PDSSWKKSLMEV 313
+A M + ++A+ D L L P+ + L +
Sbjct: 309 VKVRAVQYMESTGSFQYCREVLSGLMEQARGHVDELETLLGPNQEIHRILDLL 361
>gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C]
gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C]
Length = 355
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 97/277 (35%), Gaps = 18/277 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSAL 90
D+V+ + GGKRLR +L A ++ G A +IE + T L+HDD++DD+ +
Sbjct: 44 DLVRDMSLRGGKRLRVVLLYEAAALVADDGLAGLDEAAISIELLQTHGLIHDDIIDDAPV 103
Query: 91 RRGKVAARLVWGNQTS-----------------VLVGDFLLSQAFCMVIETKSQEALEAL 133
RRG + + ++ + +L + + A+ A
Sbjct: 104 RRGGPSTYYAYRHEFPDQPDTALALALLAGDLAAFLSLRVLLTSGLPADRALAMAAVHAD 163
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ A + + + + KS + +
Sbjct: 164 TGAATMTGQMIDLERDFHPAPGIDFLHAVTEFKSTRYSVLAPLRMGLLAAGADHTPYDAE 223
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L+ Y LGIA Q+ DD LD G+ +GK +G D R+G+ + + E+
Sbjct: 224 LRRYATALGIANQIHDDWLDLFGDPAALGKPVGSDIRSGRRSYTLRALTAVCNDAERKLL 283
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
D E L + I R + A +
Sbjct: 284 DEASGDPDCDDETLDRIRRIARAHGVDRQLRAEADDH 320
>gi|45190369|ref|NP_984623.1| AEL238Cp [Ashbya gossypii ATCC 10895]
gi|74693865|sp|Q758K0|GGPPS_ASHGO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|44983265|gb|AAS52447.1| AEL238Cp [Ashbya gossypii ATCC 10895]
Length = 320
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 95/280 (33%), Gaps = 12/280 (4%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S E++ +L+ GK R L + +E +H A+LL DD
Sbjct: 16 ASQEELLRQPYNHLVTQPGKNFRNTLIRVFNGFYGLSERQVAAVTELVEMLHVASLLIDD 75
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ--------AFCMVIETKSQEALEALSL 135
+ D+SA RRG AA +V+G+ ++ +++ A
Sbjct: 76 IEDNSAWRRGVAAAHVVYGSPMTINTANYMYFVSMSLLGQLAAQRPAGPLQDLLKVFNEE 135
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
+ L +E DYL ++ KT LF + + + + L
Sbjct: 136 MMNLHRGQGLDIYWRDTFTVPSEHDYLRMVMHKTGGLFRLTVRIMEALREGPDGPGSTLV 195
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
LG+ +Q+ DD L+ K +D GK + P+I Q + +
Sbjct: 196 PLSNLLGVLYQVRDDYLNLTDSRMSENKGFADDITEGKFSYPIIHGLQYARVHDPAGYDF 255
Query: 256 TI---NDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYG 291
+ + ++ + + + +L T+ R
Sbjct: 256 LVSVLRQRTTDITTKRRVVRYLADVSGSLAYTKQRIIELA 295
>gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
Length = 289
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 10 KDMEKVNFLILKR-ICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ ++N I + SDV + + + Y + +GGKR+RP++ L + H
Sbjct: 2 DKLNEINQAIRRYYAQSDVVSPDLIEAILYSVEAGGKRIRPLIFLEILEGFGIELTEGHF 61
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 62 DVAAALEMIHTGSLIH 77
>gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
Length = 330
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 11/305 (3%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ ++++ GGK LR +LT +AL + +L +E L+HDD+ D
Sbjct: 24 DPLYQELLQDYPRRGGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDIED 83
Query: 87 DSALRRGKVAARLVWGNQ------TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
S RRG+ A + ++ + L + LE +V T
Sbjct: 84 GSEERRGRPALHRLHPMPLALNAGDALHGEMWGLLAEGVARGSLSPEVLLEFHQVVRRTA 143
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
L L + + + A ++A + N+ + G+
Sbjct: 144 YGQHLDLLWTLTGRLDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAGNTPHPLYEEAGLK 203
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG AFQ+VDDVL+ G+ + G+ + + + + + + +
Sbjct: 204 LGTAFQIVDDVLNLEGDEAYGKERAGDLYEGKRTLILIRFLEEATLEERQRAMALLRLPR 263
Query: 261 KIS-VENLKKAFIIMRENRALVDTEYRAYSYGQK----AKDSLRCLPDSSWKKSLMEVVD 315
+ E ++ + + + AL + A ++ L+ LP+ + L+ +++
Sbjct: 264 EAKPEEEVRWLWERLLASEALAWAKGVAQRLKEEGLGALLPLLKALPNQEAARVLVGLLE 323
Query: 316 FCLQR 320
++R
Sbjct: 324 ALVER 328
>gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88]
gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger]
Length = 389
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 102/270 (37%), Gaps = 5/270 (1%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
Y++ GK +R L A + L+ ++ ++ + +HTA+LL DDV D+S LRR
Sbjct: 94 PYDYMLQHPGKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTASLLIDDVEDNSILRR 153
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ A V + + A++ L G+ L
Sbjct: 154 GIPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRD 213
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L ED + ++ + ++S + S +G+ FQ+ DD L
Sbjct: 214 TLTCPSEDEYLEMVGNKTGGL---FRLAVKLMQAESSSGKDCVSLVNVMGLIFQICDDYL 270
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ K + ED GK + P+I + + + + S + E A
Sbjct: 271 NLSNTTYTKNKGLCEDLTEGKFSFPIIHSIR--SNPGNHQLLSILKQKTKDDEVKLYAVS 328
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
M + T KA ++ +
Sbjct: 329 YMESTGSFAHTRDVVRELRAKALTLIQAID 358
>gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
Length = 294
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y + GGKR+RP+L A +
Sbjct: 1 MTEFASWMRAQGARTEAALDQTLPNADTVPHTLHEAMRYAVLGGGKRVRPLLVHAAGEVT 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
+ ACA+E IH +L+H
Sbjct: 61 GASAEACDAAACAVEMIHAYSLVH 84
>gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 297
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 13 EKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V I + I + + D +Y + +GGKR RP L L A L + D A A
Sbjct: 12 AQVEAKIEQSIAALGAKSKVRDACEYALRNGGKRFRPALVLMVAKTLGKQAD-ASEAALA 70
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+EF HTA+L+ DD +D+ RR + V+G ++L L+++ + + +
Sbjct: 71 VEFFHTASLIADDLPCMDNDDERRNMPSLHKVFGEDIALLASYALIAEGYRYLAQNSETL 130
Query: 129 ALEALSLVACTLAEG 143
+ +S
Sbjct: 131 KQQQVSFSDRCDHLC 145
>gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
10500]
gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
10500]
Length = 392
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 110/308 (35%), Gaps = 19/308 (6%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+I Y+ GK +R + A L+ + ++ + +H A+LL DDV
Sbjct: 84 KESIIMGPYDYISKQPGKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNASLLIDDVE 143
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A V + S A++ + L +G+
Sbjct: 144 DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEELLNLHKGQG 203
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
L L E+ + ++ + ++ + +G+ F
Sbjct: 204 MDLFWRDTLTCPTEEEYLEMVDNKTGGL---FRLAVKLMQAESDTGRDCVPLVNVMGLIF 260
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ + K + ED GK + P+I + + + + E
Sbjct: 261 QICDDYLNLSDKTYSKNKGLCEDLTEGKFSFPIIHSIR--ADPSNVQLINILKQKTKDEE 318
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---------PDSS-----WKKSLM 311
A M + T+ +A + + D+ ++ L
Sbjct: 319 VKLYAVNYMESTGSFAHTKKVVAQLRDRALKLIDEMDGVHDQAEAEDAPREGRFVREILE 378
Query: 312 EVVDFCLQ 319
++V+ L+
Sbjct: 379 KIVELTLK 386
>gi|159040415|ref|YP_001539668.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157919250|gb|ABW00678.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 384
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/325 (18%), Positives = 110/325 (33%), Gaps = 40/325 (12%)
Query: 14 KVNFLILKRICSDVEMIPDV----------VKYLIFSGGKRLRPMLTLATAL--MLEYRG 61
V+ + + ++++ + + + + +GGKR+RP
Sbjct: 39 AVDDTLDDFLSAEMDTLTAIDQAVGGFAVTARDSVLAGGKRVRPTFAYWGWRGVAGGGEP 98
Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQ 104
+ A+E +H L+HDDV+D SA RRG+ A + +G
Sbjct: 99 LPPVLPALAALELLHAFALIHDDVMDSSATRRGRPTAHVAVAAQHAAAGRRGDPGKFGET 158
Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
++LVGD L A ++ A E L ++ V
Sbjct: 159 VAILVGDLCLVWADRLLARAALPPARLLEVRRCYDQMRVETIAGQYLDVLGESDPTNWSV 218
Query: 165 IKSKTAVLFSAALEVSSLI---------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
++ + A + + A YG+ +G AFQL DD+L
Sbjct: 219 DRALQVARYKTASYTVQWPLLFGARLAGVVAEPPLIAAYTRYGLAVGEAFQLCDDLLGVY 278
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ GK G+D R GKPT ++LA ++ + + ++
Sbjct: 279 GDPATTGKPAGDDLRTGKPTALLMLARTLADPAQRRALDQVGVGA--GDREVTRLADVVA 336
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRC 300
+ A+ E +A +L
Sbjct: 337 DTGAVAQVERMISDRVDEALAALDD 361
>gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
Length = 170
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V +I ++ + I + Y +GGKRLRP+L T + G
Sbjct: 11 KEVQNIIYTYAPAEEGFQKTIFTAMNYSFQAGGKRLRPLLMQETYRLFGGTGKVVEPFMA 70
Query: 70 AIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
AIE IHT +L+HDD+ D+ RRG+ + +V+G ++L GD LL+ AF
Sbjct: 71 AIEMIHTYSLIHDDLPALDNDEYRRGRKTSHVVFGEAMAILAGDALLNYAFETAC 125
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + G KR P++ +A + AC
Sbjct: 55 ITEINQKLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAFPTAC 114
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H A+L+HDD +DD +RRGK + V+G+ ++L GD L AF ++
Sbjct: 115 ALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPP 174
>gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
Length = 351
Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + K++ + +IL S E + +Y + +GGKR+RP+L L+T LML
Sbjct: 49 LDQVRQWQSKNLPNLLDIILTH-SSLPEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQT 107
Query: 61 GDN-------------HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQT 105
GD+ A+E IH+ +L+HDD+ LRRG+ +V+G
Sbjct: 108 GDHKNHKNNLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDV 167
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALS--------LVACTLAEGELRQLSLSKNLDVT 157
++L GD L S AF ++ E + + + +N ++
Sbjct: 168 ALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLS 227
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
++ + + KT L AA+ + ++ A VQ LK Y +G+AFQ+ DDVLD +
Sbjct: 228 QDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITAD 287
Query: 218 VNEMGKNIGEDFRNGKPTLP 237
+GK G D + K T
Sbjct: 288 TITLGKPAGSDEKLEKSTYV 307
>gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 349
Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 17/293 (5%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + + V+ + + + I V KY +G GK +RP L LA A
Sbjct: 17 ALLERTRDAVDPQLRAAVETLPGAIRRVAKYHFGWQDADGTPAAGRAGKAIRPALVLAAA 76
Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ D + A A+E H TLLHDDV+D+ RR + A V+G +V+ GD +
Sbjct: 77 RAVGGDPDAAMRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAVITGDAMF 136
Query: 115 SQAFCMVIETKSQEALE-----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
S A ++ + + + ++ + L DVT ++ L + +KT
Sbjct: 137 SLALRLLTDDPHPASPHAAGRLSTCVIELCAGQQADCGLEDRGPDDVTLDECLAMAMAKT 196
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L A + +L G +A+ +G G+AFQL+DD++ G+ GK +G D
Sbjct: 197 GALLGCACALGALYGGADERAVRAMDGFGREAGLAFQLIDDLIGIWGDTARTGKPVGADL 256
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
K +LPV+ A GT + ++ A +
Sbjct: 257 TAHKKSLPVVAALTSGTPAAAELAALYRGAMN-TPGEVRSAADAVERAGGRDW 308
>gi|299115991|emb|CBN75992.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 338
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 5/263 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I + Y+ GK +R L A + L+ + + + +H A+LL DD+ D+S
Sbjct: 23 IMEPFHYINQVPGKDVRGKLIDAFQIWLDIPAERIDAIKEVVGMLHNASLLVDDIEDNSK 82
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG A ++G +++ +++ QA + ALE L G+ R +
Sbjct: 83 LRRGVPVAHSIYGVASTINTANYVYFQALERTHALGNSRALETFVHEQLNLHRGQGRDIL 142
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ E+ + + ++ L + FQ+ D
Sbjct: 143 WRDSNRCPTEEEYESMVLDKTGGLFRLAVGLM---QAFSQDQRNYTPLLDQLALYFQIRD 199
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+++ GK+ ED GK + P+I + K + + + V+ K
Sbjct: 200 DLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCVR--AKPNDHRLLNILKQRTEDVDVKKH 257
Query: 270 AFIIMRENRALVDTEYRAYSYGQ 292
A + M++ + V T +R S +
Sbjct: 258 AVVWMKQAGSFVYTRHRLVSLKE 280
>gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133]
Length = 293
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVS 180
+ ++ + + LD+ E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELMQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293
>gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150]
Length = 291
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ +EK+ I S + +V+ Y + +GGKR+RP+L L + H
Sbjct: 4 NEKLEKIGLTIEDFYKSQQVSPDLTEVILYSVKAGGKRIRPLLLLGLIQAFGLELTEAHY 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ + + L LL++
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLAR 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + +L+ + + G++ + + ED + +KT L +
Sbjct: 124 AELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEG-QVIRLEDLKTIHANKTGKLLTYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ LIA V+ SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T
Sbjct: 183 FVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAADKSTY 242
Query: 237 PVILAFQRGTKREKNFWK-------STINDGKISVENLKKAFIIMRENR 278
P L + S E ++K +R N
Sbjct: 243 PAFLGLDGAKNFFNQTLDEAVDILKDLEEKTEFSSEEIQKIIESLRLNG 291
>gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
Length = 375
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 67/318 (21%), Positives = 116/318 (36%), Gaps = 36/318 (11%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGDNHVL 66
+ ++ +L ++ +V + GGKRLRP+ + +
Sbjct: 46 LAAMDESLL-------PVVDEVC--ALADGGKRLRPLFAYWGWRGVRGERPGESDAAVLR 96
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVG 110
A+EF+H + L+HDDV+D + RRG+ A + + + ++LVG
Sbjct: 97 AVAALEFVHASALVHDDVMDGALTRRGRPATHVGFAARHGDGELAGDGDTFGIGAAILVG 156
Query: 111 DFLLSQAFCMVIETK------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
D L + ++ + S+ ++ A L L + L +
Sbjct: 157 DLALVWSDELLRRSGISTAALSRARTVWDTMRTEVTAGQYLDLLRAAGGLPGAQGALTVA 216
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
L++ + IAG + + G+ LG AFQL DDVL G+ GK+
Sbjct: 217 RYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQLRDDVLGVFGDPTVTGKS 276
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
+D R GK TL V LA + + + + E +M A E
Sbjct: 277 ADDDLREGKQTLLVALAEEAADGAGRQLLGEALGNPLAGPEEFDALRSLMESTGARAQVE 336
Query: 285 YRAYSYGQKAKDSLRCLP 302
R A+ ++ P
Sbjct: 337 QRIAERTALARTAIAEAP 354
>gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 345
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 126/309 (40%), Gaps = 2/309 (0%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
V+ +LK SDV I + + L + G+RLRP+L L A + V A +E
Sbjct: 19 AAVDEGLLKATKSDVPFINEAARELTRTAGRRLRPLLVLLAARFGDPGAPGVVPAAVVVE 78
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
H AT HD V D++A+R G W N +VL+GDFL ++A ++ +A+
Sbjct: 79 LTHLATHYHDGVRDETAVRPGARGPDANWDNTVAVLIGDFLFARA-SHILADLGPQAVRL 137
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ G++ + + ++ E +L V+ +T L + + + +L++G S
Sbjct: 138 QAEAFRRQVTGQILETAGPRDGRDPVEHHLEVLAGRTGALTAVSGRLGALVSGADPSAVD 197
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-TKREKN 251
AL YG LG+A L D++ + + R G + R +
Sbjct: 198 ALARYGERLGMASHLADELATPTARRPTLPVLLLLAERVGAGAPERMDPEDRAGRADLAD 257
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ G +A +R + L A+ +L LPD + +L
Sbjct: 258 RELYELLTGPADRPGYAEAVARLRTHPVLDRAREETARQADAARAALSTLPDCPARAALE 317
Query: 312 EVVDFCLQR 320
+ + ++R
Sbjct: 318 SLCETVVRR 326
>gi|313606485|gb|EFR83335.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208]
Length = 97
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%)
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ E ++ ++ + + + A Y KA ++ LP +++ + +
Sbjct: 31 LSQKLDMTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPAGTYRDDMYRLTK 90
Query: 316 FCLQR 320
L R
Sbjct: 91 NILDR 95
>gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 373
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/324 (16%), Positives = 97/324 (29%), Gaps = 33/324 (10%)
Query: 2 KMLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++++ + + + I + D + L +GGKRLR +L
Sbjct: 18 DRFRAAVADALDRLLAEHRELARGIHPLTAPLVDAIADLT-AGGKRLRAVLAWLGWRAAG 76
Query: 59 YRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN------------- 103
+ A E A L+HDD++D S RRG + + +
Sbjct: 77 GEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRRGMPSVHRRFESLHREAGWRHAAEH 136
Query: 104 --------------QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
S +L+ + + L +
Sbjct: 137 FGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELARMRFGVMAGQYLDVVAEMAPA 196
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ V L + L+AG + + A + G+AFQ D
Sbjct: 197 ARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLPFGMAFQYRD 256
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+L G+ GK G+D R GK T+ + A + E + + D + + +
Sbjct: 257 DLLGVFGDPATTGKPAGDDLREGKQTVLIARAVELLAPDEAVALDADLGDPDLGADRVAH 316
Query: 270 AFIIMRENRALVDTEYRAYSYGQK 293
++ A E R +
Sbjct: 317 WQAVLEACGARQAVEERVAVLAHE 340
>gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO]
gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO]
Length = 276
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 6/241 (2%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+K+N + + I M+ + Y + S GKR+RP+L + + D A A+E
Sbjct: 8 KKLNEKMTRLIN-KSTMVEQAMAYSLLSAGKRIRPVLIKLICEDMGVQEDLIWNPAMAVE 66
Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
HTA+L+HDD+ LRRG+ + +V+GN ++L GD L+ AFC++ +T +
Sbjct: 67 LFHTASLIHDDLPQIDDSPLRRGRPSCHVVFGNDMAILAGDGLMLMAFCVLNQTPADPVS 126
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA---GVQ 187
+++ + + ++ +E ++ + A I +
Sbjct: 127 KSMLFDLFSKSTYDVLIGEAMDVEFTGKEKDINDVIEMYRKKTGALFSFCFAIGAILMKK 186
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L + G G+ FQ+VDD+ D G+ +GK G D GKPT+ I+ Q
Sbjct: 187 LEYLEKLINVGSTFGVWFQIVDDLKDVSGKDENVGKTTGRDKALGKPTVVNIMGIQEAKN 246
Query: 248 R 248
Sbjct: 247 F 247
>gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
Length = 344
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 14/294 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ + ++ R+ + D+++ GGK LR +LT+ +AL + + A A+E
Sbjct: 10 QALQERLIARLDHTDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLETATALE 69
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKS 126
L+HDD+ D S RRG+ A + ++ GD + ++ +
Sbjct: 70 LFQNWVLVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPP 129
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ LE +V T L L + + + AV ++A + + + V
Sbjct: 130 EVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAVYYTAVVPLRLGVLLV 189
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ A + G+ LG AFQ+VDDVL+ G + G+ + + + + +
Sbjct: 190 GKTPPAAYEEGGLRLGTAFQIVDDVLNLEGGEAYGKERTGDLYEGKRTLILLRFLEETPP 249
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ + + +RAL + A + L
Sbjct: 250 EE--------RAREAKPEAEVGWLLERLLASRALAWDKAEAKRLQAEGLALLEA 295
>gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
Length = 306
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 9/244 (3%)
Query: 14 KVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
++ + + + + +++ +F GG R+RP L +A A+ +
Sbjct: 6 RIEQALEAAVAAQEGAGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPELADAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE IH A+L+HDD DD+ RRG+ + +G + +VL GD L+ AF +
Sbjct: 66 ASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAG 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
++ ++ ++ E + + A + ++ A
Sbjct: 126 ARHPERMARVLQTVARGVGTPLGIIAGQAWECEPRV-ALSDYQRAKTGALFAAATAAGAQ 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ ++ G LG A+Q+ DDV D + ++GK +G D G+P+ +
Sbjct: 185 ASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGKPVGRDVALGRPSSAIQHGLVGA 244
Query: 246 TKRE 249
+
Sbjct: 245 VEHF 248
>gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata]
Length = 332
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 95/293 (32%), Gaps = 13/293 (4%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+EK+ LI SD I ++ + GK R L + L
Sbjct: 3 LEKLKTLIESPPAWSQSDENSINQPYNHIASNPGKNFRAKLIHLFNQFYLLDENIIQTLT 62
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--MVIETKS 126
+E +H ++L+ DD+ D+S LRRG VA+ +++G S+ +++ A + +
Sbjct: 63 QIVEILHNSSLIIDDIEDNSQLRRGVVASHMLYGVPMSINTANYMYFVAMDLLRNLSHDA 122
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLD-----VTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + + + L Q D V E+ +
Sbjct: 123 VTSNDLMKIFNEELLYLHRGQGLDIYWRDSLPKVVPTEEMYFNMVMNKTGGLFRLTLKIM 182
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+++L G LGI +Q+ DD L+ K +D GK + P+I
Sbjct: 183 ERLSEYWQGQKSLVPLGNLLGIIYQVRDDYLNLTDSSMIETKGFADDISEGKLSFPIIHG 242
Query: 242 FQRG--TKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYG 291
+ K A + + +++ T
Sbjct: 243 INYAKIHDPNNTLLLDILCLKTKDENLKKNAIRYLSDCSKSFEYTSSVLKKLT 295
>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
Length = 297
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 3 MLEDLTLKDMEKVNF---LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ + + + L+L + S +++ + + Y + +GGKR+RP+L L+
Sbjct: 6 EFQQFLTEQINILEARFPLLLNPLKS-PDILKESMLYSLNAGGKRIRPVLLLSVLHAAGK 64
Query: 60 RGDNHVLLACAIEFIHTATLLH 81
+ A A+E IHT +L+H
Sbjct: 65 PLEAGYRTAAALELIHTYSLIH 86
>gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Streptococcus pyogenes NZ131]
gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Streptococcus pyogenes NZ131]
Length = 221
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo]
gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str.
Manfredo]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
pyogenes MGAS10270]
gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10270]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
pyogenes MGAS2096]
gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS2096]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 293
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLH 81
+ + +Y + GGKR+RP L LA + + A A+E IHT +L+H
Sbjct: 34 PSRLVEATRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVH 91
>gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10750]
gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10750]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232]
gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232]
gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS]
gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
pyogenes MGAS5005]
gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes M1 GAS]
gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
pyogenes MGAS5005]
gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes SSI-1]
gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes SSI-1]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus
pyogenes M49 591]
Length = 290
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
multivorum AIU301]
gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
multivorum AIU301]
Length = 289
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 59/317 (18%), Positives = 109/317 (34%), Gaps = 51/317 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M ++E M + + +++ +F G R+RP L LA A
Sbjct: 4 MSLIESTLTTAM------LRAETGGGPPKLAAAMRHAVFPRGARVRPRLCLAVASACGAD 57
Query: 61 G-DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
D V A+EF+H A+L+HDD+ RRG+ + +G +VL GD L+ A
Sbjct: 58 RFDAAVAAGAALEFLHCASLVHDDLPCFDDAATRRGRPSVHAAFGAPIAVLAGDALIVLA 117
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
F + + + ++L + ++ +E++ + + + A +
Sbjct: 118 FQTLALGCAVQPGPVIALSGIVAEAVGMPGGIVAGQAWESEDEV-DLARYQRAKTSALFA 176
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ A ++ G NLG A+Q+ DD+ D G+ GK +G D +P+
Sbjct: 177 AAAMAGAASAGEDPLPWRALGDNLGDAYQIADDLCDAAGDAASCGKPVGRDAALHRPSAV 236
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ ++A S
Sbjct: 237 RRF--------------------------------------GIEGALDLLDEVAERAASS 258
Query: 298 LRCLPDSSWKKSLMEVV 314
+ PD SL ++
Sbjct: 259 I---PDCPGVASLRALI 272
>gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
Length = 291
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LI Q SV
Sbjct: 138 LSLASGSFGMVAGQVLDMQGEG-QAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S E ++K +R N
Sbjct: 257 QTLDEAVDILKDLEEKTEFSGEEIQKIIESLRLNG 291
>gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B]
gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B]
Length = 339
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 83/325 (25%), Positives = 137/325 (42%), Gaps = 15/325 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI----------FSGGKRLRPMLTLATALMLEYRGD 62
+ V+ + + I I V Y GGK +R L + +A
Sbjct: 15 DLVDRPLREAIDRLAPKIRRVAAYHFGWEEADGRPGNGGGKAVRSALAVLSAQAAGAPAA 74
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E +H +LLHDDV+D RR + A V+G ++L GD LL AF +++
Sbjct: 75 VGIPGAVAVELVHNFSLLHDDVMDGDEERRHRPTAWTVFGRSAALLAGDALLGLAFDVLL 134
Query: 123 E-TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ A L L G+ L LDV+ ++ + + +KTA L + A + +
Sbjct: 135 DAEHGDAAQRCLGSATQELIAGQFDDLDFETRLDVSLDECVSMAGAKTAALMACASSIGA 194
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+AG ++ AL +G +LG+AFQLVDD+L G GK +G D R K +LPV+ A
Sbjct: 195 RLAGADPALVNALDDFGRHLGLAFQLVDDLLGIWGAPEVTGKPVGADLRARKKSLPVVAA 254
Query: 242 FQRGTKREKNFWKSTINDGKISVEN---LKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
GT + + + + + A ++ A A +L
Sbjct: 255 MTSGTPAGEELRILYGGEKLHADADAHVVGLAAELVEAAGGRRWAMEEADRRLAAACAAL 314
Query: 299 RCLPDSS-WKKSLMEVVDFCLQRLN 322
+P K L+++ + R +
Sbjct: 315 DGVPVVPAAKTGLLDIARYVTSRDH 339
>gi|195125053|ref|XP_002006997.1| GI12688 [Drosophila mojavensis]
gi|193918606|gb|EDW17473.1| GI12688 [Drosophila mojavensis]
Length = 444
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/363 (11%), Positives = 97/363 (26%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 82 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 135
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ +
Sbjct: 136 AAGHAPSIPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSGTEAGQDTTTYD 195
Query: 102 GNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
L+G A E + Q +
Sbjct: 196 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVSELISSAVRDFSESEFIGERDEQNNPLP 255
Query: 153 NLDVTEEDYLHVI------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
T + + + + + ++ A G + + +
Sbjct: 256 FKPGTFQRPSLTVGVDFNEHDVMTPMPIGQVMGNPEQEWECRNILNAGSLLGKSCQASLK 315
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKP-------------TLPVILAFQRGTKREKNFW 253
L + GK++ ++ T ++ A
Sbjct: 316 LAGQSEQMQRHAYRFGKHLALAWQACLDAESFQSPTLPPDATFSLVSAPVLFHLEHDPSL 375
Query: 254 KSTINDGKISVE--NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
I GK SV+ + + + AL T+ + + A L+ P + +++L
Sbjct: 376 YKLIEPGKKSVDLVDYNQIHKEILAGPALAKTKELQRKHTEAALGVLQHFPATDARQALE 435
Query: 312 EVV 314
++
Sbjct: 436 NII 438
>gi|2281328|gb|AAC45506.1| GerCC [Lactococcus lactis subsp. cremoris MG1363]
Length = 92
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
K++ +V+ L+ + + + + +GGK LRP L + + + L
Sbjct: 14 LEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLAL 73
Query: 68 ACAIEFIHTATLLHDDVVD 86
A ++E +HTATL+HDDV+D
Sbjct: 74 AASVEMMHTATLVHDDVID 92
>gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653]
gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653]
Length = 468
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/313 (17%), Positives = 110/313 (35%), Gaps = 22/313 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + +L+ + G+ RP + A +L+ + + L E +H + L+ DD+ DDS
Sbjct: 138 VAAPLLHLLNNPGRSWRPYVAAAVLCLLDADPEPYRPLTAVTELLHLSALVIDDIQDDSP 197
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLL----------------SQAFCMVIETKSQEALEAL 133
RRG+ + V+G ++ G + + + A A
Sbjct: 198 TRRGRPSVHEVFGTAPAITAGTLGYYTFDALIQRVPQAAPETMLRIYRLYLRDLRAAHAG 257
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + S + ++ + KT +L + EVS+L+ G A
Sbjct: 258 QALDIAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRSTAEVSALLGGADERQLDA 317
Query: 194 LKSYGMNLGIAFQLVDDVLD----YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ Y +G A+Q+ DDV D + ++ G + + +
Sbjct: 318 ICRYFEAVGTAYQITDDVADLYGLVTAQEHQQGITTRSPAEDLRNGEVTYPVAHAVGLLD 377
Query: 250 KNFWKSTIND-GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWK 307
+ + S + A ++ + AL A S +A +L LP + K
Sbjct: 378 TTDRHHLRDALRQRSDTGARAASELLVRSGALEACMTEARSLVDEAWANLAPLLPPTPHK 437
Query: 308 KSLMEVVDFCLQR 320
+ + + QR
Sbjct: 438 AMVRALGWYAAQR 450
>gi|294942867|ref|XP_002783701.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
ATCC 50983]
gi|239896273|gb|EER15497.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
ATCC 50983]
Length = 223
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 10/134 (7%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGE----VNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+G++ G+ FQ+ DD+LD + +GK G D NG+ T P + A
Sbjct: 95 CYLFGVHFGLEFQIRDDMLDVEMDVEGSSGSLGKPKGTDLLNGQATAPFLFACDDDPSLL 154
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ G + + A ++ N AL + + KA L LPD ++
Sbjct: 155 S-----LVERGFKGEGDAEMALEALQRNGKALQRAKLLVGYHASKAIGCLLQLPDCDARQ 209
Query: 309 SLMEVVDFCLQRLN 322
+L+++ R +
Sbjct: 210 ALIDLTSSYAARTS 223
>gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
Length = 172
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 26/96 (27%), Gaps = 1/96 (1%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+++V + + + + ++Y + GGKRLRP+L LA +
Sbjct: 21 LDEVERALGNWVGDGAPAGLGEAMRYAVLDGGKRLRPLLVLAAFEAVHGEAVAAGAADGN 80
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
L +
Sbjct: 81 AALRAGMQAAALRAACAVELIHAYSLVHDDMPCMDN 116
>gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 289
Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 10 KDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ ++N I + + + + Y + +GGKR+RP++ L + H
Sbjct: 2 DKLNEINQAIRRYYAQSDAVSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIELTEGHF 61
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 62 DVAAALEMIHTGSLIH 77
>gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 290
Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 10 KDMEKVNFLILKR--ICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +++ I + S+ E + D + Y + SGGKR+RP++ L N H
Sbjct: 2 DKLARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSLQNAH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
LA A+E IHT +L+HDD+ +
Sbjct: 62 FDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQ 99
>gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 289
Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 13 EKVNFLILKRICSDVE-------MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-- 63
E++ +I + + +++ I + +KY + +GGKR+RP+L L + + N
Sbjct: 7 EELINIIDQNLYTNIPTTDDFQKKIYESMKYSLSTGGKRVRPILALVSYSIFNDDSKNFS 66
Query: 64 -HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E+IHT +L+HDD+ +D+ +RRGK V+ ++L GD LL+ A
Sbjct: 67 EIIPFAVALEYIHTYSLIHDDLPAMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAAE 125
>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
Length = 348
Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
+ + K++ + +IL S E + +Y + +GGKR+RP+L L+T L L
Sbjct: 49 LDQVRQWQSKNLPNLLDIILTH-SSLPEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKT 107
Query: 58 EYRGDN-------HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVL 108
++ D+ A+E IH+ +L+HDD+ LRRG+ +V+G ++L
Sbjct: 108 GHQTDDLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALL 167
Query: 109 VGDFLLSQAFCMVIETKSQEALEALS--------LVACTLAEGELRQLSLSKNLDVTEED 160
GD L S AF ++ E + + + +N ++++
Sbjct: 168 AGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDK 227
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ + KT L AA+ + ++ A VQ LK Y +G+AFQ+ DDVLD +
Sbjct: 228 LEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTIT 287
Query: 221 MGKNIGEDFRNGKPTLP 237
+GK G D + K T
Sbjct: 288 LGKPAGSDEKLEKSTYV 304
>gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521]
gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521]
gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 288
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 13 EKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ +N + + ++I D Y I GGKR+RP+L + + + N + +AC
Sbjct: 7 KDINDYLDNYFKNKGIYNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKNILPMAC 66
Query: 70 AIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
+IE IHT +L+H +DD LRRGK V+G +VL GD LL++A ++++ +
Sbjct: 67 SIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEAMILMMDYSLK 126
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVS 180
+L + + + +DV +++ ++ KT L A++
Sbjct: 127 NGGNSLKAAYEIASSAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALIRASIVGG 186
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+++AG S + L++YG LG+ FQ+ DD+LD G+ + +GKN D + K +
Sbjct: 187 AVLAGACESDVKILRTYGEKLGLVFQIKDDILDVVGDADVLGKNTHADEEHDKTNFISVY 246
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
L + ++ + L+
Sbjct: 247 --------------------------------------GLDKCRELCKTISEECVELLKT 268
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
L + + L+++ L R +
Sbjct: 269 L--TVDSQCLVDLTYDLLNRES 288
>gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43]
gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str.
Alaska E43]
Length = 289
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 1 MKMLEDLTLKDMEK--VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+ L++ + ++K +N S + + + Y + GGKR+RP L + T + +
Sbjct: 3 IDNLKNSIDEYLKKYFINR------NSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYK 56
Query: 59 YRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + +A AIE IHT +L+H +DD LRRGK V+G +VL GD LL++
Sbjct: 57 DNIEKIMPIAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNE 116
Query: 117 AF 118
A
Sbjct: 117 AM 118
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 13/44 (29%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L E + L L S L E+ L RLN
Sbjct: 248 GLEKCEELCKILTDECIQILDNL--SVDASLLKELTYNLLNRLN 289
>gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
DelRiverFos06H03]
Length = 304
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHDDVV 85
+ +++ +FSGG R+RP L +A A + A E +H A+L+HDD+
Sbjct: 24 PPRLVAAMRHAVFSGGARIRPQLCMAVATACGDNAPHLTDAAAVALELMHCASLVHDDMP 83
Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
D++ RRG + ++L GD L+ A+ ++++ Q+ ++L+ A
Sbjct: 84 AFDNADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLLQAGVQQPDRLVALMDNLTAGV 143
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
L ++ E + + + A + + + A + G LG
Sbjct: 144 GLPHGIVAGQAWECE-TSADLGQYQRAKTGALFVSATCAGALSCGVAPEPWAFLGQYLGE 202
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A+Q+ DD+ D + +GK G+D + +P+ L +
Sbjct: 203 AYQVADDIRDVIADAATLGKPAGQDTLHARPSSAQALGLTGAIAHFDH 250
>gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi]
Length = 292
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 29/280 (10%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALML---------------------EYRGDNHVLLACAI 71
+ KY+ GK LRP L A L + L
Sbjct: 2 IAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDNSSGAIRPFLRLGEIT 61
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A + +
Sbjct: 62 ELLHTATLVHDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGHSRVVL 121
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
+S LA GE+ Q+ +++ E+ S A ++ ++ L
Sbjct: 122 LMSTALEDLAAGEMMQMDGCFDIESYEQKSYCKTASLIANSLASTAVLAGLPNTAYEE-- 179
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+ RE+
Sbjct: 180 -AAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVL-----LAAREET 233
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ + + + + + + + A +
Sbjct: 234 RVYEAVRRRFKNPGDTEMCMEAVERHGCVAEALEHAGEHC 273
>gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
Length = 284
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 58/329 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+E++ + +N + + + + +++ D + Y + S GKR+R L L M +
Sbjct: 1 MIENILKEKRNLINKHLAGLLKTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ +A ++E +HT +L+HDD +D+ RRG + +G ++ GD LL+ A
Sbjct: 61 DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120
Query: 118 FCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + K + +N + ++ + K KT
Sbjct: 121 FQLISQAKFSAKDRCKLIEILSIAAGAEGMVAGQVHDIQIENRSIELDELKLLDKFKTGR 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ A ++++ + + S + L+ + +LG+ FQ+ DD+LDY+ + NE+ + +
Sbjct: 181 MIKAPVDMAIQLTHMSISDAEQLRKFAKHLGLLFQITDDILDYKEDNNEIKNTHKNTYVS 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
L + A
Sbjct: 241 LL---------------------------------------------GLEKAKLAAEETA 255
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA ++L + S+ L E+V + L R
Sbjct: 256 YKAIEALELMQVDSY--ILTELVLYILNR 282
>gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
Length = 307
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/330 (18%), Positives = 113/330 (34%), Gaps = 57/330 (17%)
Query: 9 LKDMEKVNFLI----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+ + + + + + + V+Y + GKRLR +L + GD
Sbjct: 19 SAERAAIQHALDGVCRRWLSALAPATAEAVRYALLGEGKRLRAILLIEAYRACGGTGDAA 78
Query: 65 VLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVW----------GNQTSVLVGDF 112
LA +IE +H +L+H +DD +RRG+ V +
Sbjct: 79 D-LAASIEVVHAYSLVHDDLPCMDDDDMRRGRPTVHKVHGVGVATAAGLAMVPLAARSAW 137
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
S+A + E + G ++ ++ E V + KT L
Sbjct: 138 HASKALGLSDVVAGDIVRELMEASGGGGMIGGQLLDLEAEGAPLSLESLERVHRLKTGAL 197
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
A++ + + A + R AL YG ++G+AFQ+ DDVLD +E+GK G D
Sbjct: 198 IRASVTLGARAALAPEARRHALDRYGASIGLAFQIADDVLDVTATTDELGKTAGRDLDLQ 257
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
K T P ++ + RA + +
Sbjct: 258 KSTYP----------------------------------ALL----GVEGAIQRAVALVE 279
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+L+ + L ++ F ++R +
Sbjct: 280 DGCAALQA--EGLLTPPLEQLARFIVERRS 307
>gi|328709466|ref|XP_001946662.2| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like
[Acyrthosiphon pisum]
Length = 429
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/366 (15%), Positives = 121/366 (33%), Gaps = 54/366 (14%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + + + S+ ++ V + + + G ++ L +
Sbjct: 69 SLRWLLSDEIANVALHLRRMVSSNHPLLKTVKGLLSNCQSNMQAWG-----LIVLLVSKA 123
Query: 57 LEYRG-------------DNHVLLACAIEFIHTATLLHDDVVD--DSALRRGKVAARLVW 101
+ + LA E I T+ L+H+ +++ L + + +
Sbjct: 124 AGHINVDSSADEDKSGVLRSQRALAEIAEMIRTSHLMHNGLINIYPEMLPKSVDHDDMSF 183
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
GN+ +L GD+LL+ +F + K+Q +E +S L+E E S+N +
Sbjct: 184 GNKIGLLSGDYLLANSFYELSMLKNQNLMELISSALRDLSEAEFVGRRDSQNNPLPSPFE 243
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL-------------------- 201
K +A L L+ S + G N+
Sbjct: 244 PLDRKLSSARLRFNPLQPSGKLRGGMPLTPALRDWTRRNVLSAGSLLGKSCQGALLLAGH 303
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS-----T 256
G Q + + E F +G P I +
Sbjct: 304 GERLQKQGFLFGKHLSLAWQAYLDLEPFLSGSPYSLGISFNLTSAPVMFHLEHDSSLFKE 363
Query: 257 INDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
I+ G SV+++ K ++ + + T+ + +KA + L +S + +L ++
Sbjct: 364 IDKGINSVQDVDYVKVHDVVIKGPGINYTKQLQKEHSKKAMEVLNVFEESDARTALSNII 423
Query: 315 DFCLQR 320
+ R
Sbjct: 424 -IAMDR 428
>gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
Length = 288
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDDVV 85
++ + ++Y +F GG R+RP L LA AL A AIE +H A+L+HDD+
Sbjct: 24 PPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPATSEAAAAAIELLHCASLVHDDLP 83
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+RR K + +G +VL GD L+ AF
Sbjct: 84 CFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAFE 119
>gi|294945067|ref|XP_002784549.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
gi|239897625|gb|EER16345.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
Length = 146
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 10/134 (7%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGE----VNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+G++ G+ FQ+ DD+LD + +GK G D NG+ T P + A
Sbjct: 18 CYLFGVHFGLEFQIRDDMLDVEMDVEGSSGSLGKPKGTDLLNGQATAPFLFACDDDPSLL 77
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ G + + A ++ N AL + + KA L LPD ++
Sbjct: 78 P-----LVERGFKGKGDAEMALEALQRNGKALQRAKLLVGYHASKAIGCLLQLPDCDARQ 132
Query: 309 SLMEVVDFCLQRLN 322
+L+++ R +
Sbjct: 133 ALIDLTSSYAARTS 146
>gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
Length = 362
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/319 (19%), Positives = 116/319 (36%), Gaps = 42/319 (13%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDN------HVLLACAIEFIHTATLLHDDVVDDSALRRG 93
SGGKRLRP LA + D+ + A ++E++ + L+HDD++D S RRG
Sbjct: 48 SGGKRLRPAFCLAGWRVATATPDDTPVPEAVAVAAGSLEWLQGSALVHDDLMDGSDTRRG 107
Query: 94 KVAARLVWGNQT--------------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ + + + + V L ++C + + +
Sbjct: 108 RPSVHRDFEQRHRREAMVGDPAGFGAATAVLMGDLMLSWCDEMLRSAGHRPGPFTGADGA 167
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---- 195
++ +V +L V+ +A + + +V + L
Sbjct: 168 ARLARAFEVLDVCKTEVVAGQFLDVVNQTRPESSAAEAMLVVRYKAAKYTVERPLHLGAT 227
Query: 196 -------------SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ + LG AFQL DDVL G+ GK G+D R GK TL V
Sbjct: 228 LGGGDQALMAGLSAVALPLGEAFQLRDDVLGVFGDPAVTGKPSGDDLREGKRTLLVARTA 287
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ G + + + + + + + + ++ + AL E+ A+ +L LP
Sbjct: 288 ELGGEPARAVLRDALG----TDDGVPRIRDLIASSGALASVEHEIDRLVVAARTALLELP 343
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ +L ++ R
Sbjct: 344 TG-GRSTLEPLLARATDRT 361
>gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III
euryarchaeote SAT1000-53-B3]
Length = 325
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/311 (18%), Positives = 105/311 (33%), Gaps = 15/311 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ L D + + + + I + + + +++ + GK+LRP+L + L
Sbjct: 15 ENLNDYYKEVRAEFQRHMKREISKESKDLAPLIEKGV-GDGKQLRPVLCRLVSDSLGGDA 73
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A+E IH TL+HDD +D RR A G +T+VLV D +++
Sbjct: 74 HLAFECGMALELIHCGTLIHDDWLDGDKFRREAPALWKELGPRTAVLVADLMIATGSLHG 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ + A T + + V + + +S
Sbjct: 134 AISLATGKSLARCARNLTEGAIADFTDKENYSESVYLHRIKKKTGALYSTAAELGALISP 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+G +GI +Q+ DD LD + K D G PTLPV
Sbjct: 194 RTDLALPMH-----KFGETVGIIYQITDDYLDLMNSLIT--KTPVGDLALGIPTLPVTRL 246
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + G + ++ K I + + ++ L +
Sbjct: 247 SRYSKYKPSIEKFI----GTGNASDIIKNVKISDAQGIFE---ELIAPWQEMSRKFLEEV 299
Query: 302 PDSSWKKSLME 312
PDSS K L +
Sbjct: 300 PDSSTKILLEQ 310
>gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 294
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 85/234 (36%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
+ + KV LI + + +V+ +GG R+R + L L V
Sbjct: 15 NELASLLTKVEALIDTLCTGEPGSLAGIVRNHFSAGGSRVRARIALQAGSALGLSQTICV 74
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA E +H A+L+HDD+ D +RR + L G ++ GD +LS A+ + +
Sbjct: 75 ALASGCELLHNASLVHDDLQDRDGMRRNAPSMWLAHGEAIAICAGDLMLSSAYAALAQAG 134
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ A + + L + + I + + A +LIA
Sbjct: 135 PKAASMITHVHLRVAHVISGQCEDLRLGGTCNDPEAYEQIAAAKSGPLLALPLELALIAA 194
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ + A IA+Q++DD+ D + N + T P
Sbjct: 195 GREPLLGAASRAATLFAIAYQMLDDLGDADRDAANGSLNAVAVYAAKGITNPRR 248
>gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 385
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 105/301 (34%), Gaps = 24/301 (7%)
Query: 43 KRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
KR+RP +T V ++ A+E +H L+HDDV+D+S RRG
Sbjct: 84 KRIRPTMTYLGWAACAGPDRTGERRQIVTVSAALELLHLFALVHDDVMDESDSRRGVPTV 143
Query: 98 RLVWGNQTSVL----------------VGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
G + + GD L++A M+ ET LV +
Sbjct: 144 HRQAGRRHAATGAVGDPELFGTSIAILAGDLALAEAEGMIAETPPATRRLWRHLVVELVV 203
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ + I LE+ ++IAG +S R AL +YG +L
Sbjct: 204 GQRQDLTGTAARRRDLPFAHSVAILKSGRYTVQRPLELGAVIAGAPDSTRLALSNYGQHL 263
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G AF L DDVL G+ GK G+D +GKPT+ + +A R +
Sbjct: 264 GEAFALRDDVLGVWGDPARTGKPAGDDLISGKPTVLLSIAVDRTRSPAARCALDRVGTPS 323
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQ 319
+L + N E + A +L P D L +
Sbjct: 324 FGRADLAVLLEELSTNGTRSSVERMIGQAAETALRALDD-PELDPDAVAELRRLARAIAW 382
Query: 320 R 320
R
Sbjct: 383 R 383
>gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica
HM-1:IMSS]
gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 314
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 60/315 (19%), Positives = 110/315 (34%), Gaps = 30/315 (9%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA---CAIEFIHTATLLHDDVVDDSAL 90
++ + GKRLRP+ L + + + + CA+E +H +TL HDD++D+ +
Sbjct: 1 MEKFVMGPGKRLRPLSLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDDIMDEDEM 60
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
RR + ++ + + ++ F + + + A+ + + L
Sbjct: 61 RRNAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLES 120
Query: 151 SKNLDVT---------------------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
N+ E+Y I KTA+ F + +AG
Sbjct: 121 GTNIAEMVLELFSVLNYGQILDMSGLNTVEEYNLNIIMKTAIFFKTTASIGLTLAGRSEH 180
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK----PTLPVILAFQRG 245
+ K +G + GIAFQ+ DD+LD ++ K + K T +
Sbjct: 181 DIELGKEWGEHFGIAFQMRDDLLDIDPLNGKLRKMGSDIKEGKKTAVVWTALKEGVLSKE 240
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304
K + E K I+R + + QKA D+L+ L
Sbjct: 241 EKEFVEGILKLNEKAFDNQEAFTKFLNILRGKPS-EVVRQEIKEHHQKALDALKQLQLKE 299
Query: 305 SWKKSLMEVVDFCLQ 319
L ++ D L
Sbjct: 300 DGFSYLKQITDLLLH 314
>gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
Length = 315
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++ + + + + E + D + + + GKRLRP+L + TA+ L + + C
Sbjct: 14 KRIEQRLGEVLPACLEGQEQLRDAIATSVLAPGKRLRPLLAVLTAIDLNGDVEAAIEGGC 73
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
AIE IHTA+L+ DD+ LRRG+ + +G T++L ++S+AF
Sbjct: 74 AIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVIAMISRAFE 125
>gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP
synthase in Mus musculus [Schistosoma japonicum]
Length = 335
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 110/298 (36%), Gaps = 8/298 (2%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ + Y + GK +R +L A L+ +++ I+ +H A+L+ DD+
Sbjct: 13 SEKVVMEPYNYTCSTNGKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE 72
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRGK AA V+G +S+ +++ A + + E+++ + L G+
Sbjct: 73 DGSYLRRGKPAAHCVFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQG 132
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ + E + + + + + K +G+ F
Sbjct: 133 MDIYWRSSFKCPSESEYEAMVLCKTGGLFGLG---VRLMQLFSKNQTDYKPLLDTIGLFF 189
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD + K ED GK + P++ A + + ++ +
Sbjct: 190 QIRDDYANLVDLSYHKKKMFAEDLTEGKFSYPIVRAINDFPDD--SQVMNILSQHTTNSS 247
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFCLQRLN 322
M E AL T + ++ + ++ + + ++ D L R +
Sbjct: 248 LKLHCVQHMLELGALEKTVLKLAKLEERCNQLIVEFGNNPLLSEVMHKLSD--LHRTS 303
>gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum]
Length = 343
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 102/289 (35%), Gaps = 9/289 (3%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
YL+ GK +R A L+ + ++ + +H A+LL DDV D S LRR
Sbjct: 63 PYNYLVSHPGKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLLVDDVEDRSNLRR 122
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ QA +++ + L + L G+ L
Sbjct: 123 GFPVAHSIFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELLNLHRGQGMDLFWRD 182
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
L ED + S + L + G+ FQ++DD L
Sbjct: 183 TLTTPTEDDYLEMVSNKTGGLFRLAVKLMQAESASDKDYVPLVNII---GLLFQILDDYL 239
Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272
+ + K ED GK + P+I A + + + + A
Sbjct: 240 NLQSNQYTKNKGFCEDLTEGKFSFPIIHAIRS--DPSNRQLLNILGQRTTDEDVKMYAVA 297
Query: 273 IMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
M+ + T + +KA +++ + L+ ++ + R
Sbjct: 298 YMKDQTGTFDYTRKVIHDLHKKALEAVEEHGGNP---LLVAILMKLVAR 343
>gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
manganoxydans SI85-9A1]
gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
manganoxydans SI85-9A1]
Length = 318
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 11 DMEKVNFLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ + I R+ V + ++ + + GKRLRPM+ TA L D
Sbjct: 12 EAAALIARIDARLAVLVPRALPGQTGLDLAIRESVLAPGKRLRPMMAALTAGDLGGDEDV 71
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V CA+E +H A+L+ DD+ +RRG+ AA + G +VL +LS A+ M
Sbjct: 72 AVDAGCAVEMVHAASLILDDLPCMDDATMRRGRPAAHVTHGEDVAVLSAIAILSGAYEM 130
>gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina]
Length = 288
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 14 KVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLL 67
++ + + S + + V++ +F GG R+RP L LA A +
Sbjct: 6 RIEQALAAALESVTTSACPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADAA 65
Query: 68 ACAIEFIHTATLLHDDVVDDSAL 90
+IE +H A+L+HDD+
Sbjct: 66 GASIELLHCASLVHDDLPCFDDS 88
>gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
18811]
gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
18811]
Length = 332
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 6/300 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-HVL 66
+ + + + + I ++ + + GK +RP LTL + + + + +
Sbjct: 16 LSEPLHAILTEMSASWHIGFDEIDRAIRSQLNA-GKLVRPALTLIFSQLSDQNYNKSAIS 74
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
L ++E +H ATL+HDDV+D+S LRRG + + +G T+V GD+LL+ F ++
Sbjct: 75 LGASVELLHLATLIHDDVIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLDSADK 134
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
A + + GEL Q NLD T Y IK KTA LF + + +
Sbjct: 135 PVANKLALTALQEILFGELVQKQNRYNLDTTFPTYFSQIKGKTAALFKLSATFGLVSSKT 194
Query: 187 QNSV-RQALKSYGMNLGIAFQLVDDVLDYR--GEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
N+ + G N+GI FQL+DD LD+ + +GK IG+D RNG T P++ A
Sbjct: 195 YNTELLDTVSKLGENIGITFQLLDDYLDFESIMDNLSLGKPIGQDIRNGIYTAPILFALA 254
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ +++ + +IS + ++ + A++ E Y + + LP+
Sbjct: 255 DS-EVQESVKSLLLKRDEISDSEMILLHDLIISSNAMIKLEALLTEYSESLVTLITALPN 313
>gi|193636675|ref|XP_001945782.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like
[Acyrthosiphon pisum]
Length = 424
Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/366 (13%), Positives = 110/366 (30%), Gaps = 67/366 (18%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ + + + G ++ L +
Sbjct: 66 SLRWLLSDEIANVALHLRKLVGSNHPLLKTAKGLLYNGRNNMQAWG-----LIVLLISKA 120
Query: 57 LE-------------YRGDNHVLLACAIEFIHTATLLHDDVVD--DSALRRGKVAARLVW 101
+ LA E I T+ L+H+ +V+ + + +
Sbjct: 121 AGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHNGLVNIYPGLYPEPVILNDMAF 180
Query: 102 GNQTSVLVGDFLLSQAF---------------------------------CMVIETKSQE 128
GN+ ++L GD+LLS + E
Sbjct: 181 GNKIALLSGDYLLSNSCAELASLRNQDLVELISSALRDLSEAEFVGRRDSQNNPLPSPFE 240
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L L E + L +D+ L + + + +AG
Sbjct: 241 PLNRHFNSKLPLNPLEPSDSLGNMPLTPALQDWTKRNVLSAGSLLGKSCQGTLALAGHGV 300
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+++ +G +L +A+Q D+ + G + PV+ +
Sbjct: 301 ELQKQGFLFGKHLSLAWQAYLDLEPF-----MSGSPYSLGISFNLTSAPVMFHLEHDPSL 355
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ K + + + I+ + + T+ + +KA + L +S +
Sbjct: 356 FEEIDKGVNSVQDVDYAKI---HSIVMKGPGIDYTKQLQKEHSRKAMEVLEVFEESDART 412
Query: 309 SLMEVV 314
+L ++
Sbjct: 413 ALSNII 418
>gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032]
gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032]
Length = 299
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ + + Y GGKRLRP L AT M A AIE IH +L+H
Sbjct: 30 SPLVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMH 83
>gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894]
gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC
BAA-894]
Length = 299
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ + + Y GGKRLRP L AT M A AIE IH +L+H
Sbjct: 30 SPLVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMH 83
>gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
DSM 5456]
gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
DSM 5456]
Length = 312
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDV-----VKYLIFSGGKRLRPMLTLATALM 56
K L L V+ I + I +P+ +Y+ GGKR R L L A
Sbjct: 16 KKLRSL-------VDDAIKQWI----ARLPEAHAVRVAEYI-ARGGKRFRGFLVLEIARS 63
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
L R ++ + A A+E IH ++L DD++D+ RRG+ AA + +G + +V+ L++
Sbjct: 64 LGGRIEDALDAAVAVELIHASSLALDDIIDEDVERRGQKAAWVEYGVKKTVMTVYLLVTF 123
Query: 117 AFC 119
A
Sbjct: 124 AHK 126
>gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D]
gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
Length = 303
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAQWMASVVARTESALDRALPPETVAPQRLHAAMRYATLGAGKRVRPLLAHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
+ ++CA+E IH +L+H
Sbjct: 61 DASPAALDGVSCAVEMIHAYSLVH 84
>gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029]
gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
pneumoniae AR39]
gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
TW-183]
gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029]
gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
pneumoniae AR39]
gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
TW-183]
gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN]
Length = 289
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 21/231 (9%)
Query: 15 VNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ I K + I V+Y + GGKRLRP L A L D + A A+
Sbjct: 12 IESAIEKALEGFGPIGHPIRSPVEYALQGGGKRLRPGLVCMMAQGLGLNHD-VMDSALAV 70
Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--------- 120
EF+HT+TL+ DD +D+ RRG+ + T++L L+ A+
Sbjct: 71 EFVHTSTLIADDLPCMDNDDERRGRPTVHKAFDEATALLASYALIPAAYSHLRLNAKKLK 130
Query: 121 ------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + ++ + Q + +E ++ KT LF
Sbjct: 131 EQGCDPREIDIAYNIIGDITDKNIGCSGVLGGQYDDMFFSNRGQEHVQSIMIKKTGSLFE 190
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
A L G + S+ N G+ FQ+ DD D + + ++G N
Sbjct: 191 IACISGWLFGGGDPQFAPIITSFSNNFGLLFQIKDDFSDLQKDSQQIGLNY 241
>gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 304
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ L K + ++ + + S +++ ++ +GGKRLRP L T +
Sbjct: 8 MRDLISKLQKSSNYIEIVLEQHLCTLSSKNKILVTAMR-SALTGGKRLRPFLIYQTGKLF 66
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ + A AIE IH +L+HDD+ + +
Sbjct: 67 GIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQ 111
>gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
Length = 293
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 94/280 (33%), Gaps = 25/280 (8%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ I + I V+Y + SGGKR+RPML A L G + + A AI
Sbjct: 14 IETGIENSLDEFGPKGFSIRAPVEYALTSGGKRIRPMLVCMMAKGLG-MGRDVLDSALAI 72
Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------- 122
EFIHT+TL+ DD+ RRG+ + +++L L+ A+ +
Sbjct: 73 EFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLK 132
Query: 123 --------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + ++ + Q + E +I KT LF
Sbjct: 133 SLGVDSKEVDCAYDIISDITDKNFGVHGVLGGQYEDMFFTNHGPEHVQSIINKKTGALFE 192
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A L G + + G+ FQ+ DD+LD + ++G N F
Sbjct: 193 IACVSGWLFGGGTPQCVPQVLEFSQTFGLLFQIKDDILDIHQDDQDVGLNYALLFGLD-- 250
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ + L++ M
Sbjct: 251 --AAKDLLNSSKDKCLTLIHHLKHYRLKDTSELERLVEYM 288
>gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A]
Length = 257
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQ 127
E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E +
Sbjct: 6 ELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECVAV 65
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
A+ L + L G+ L +VT +DYL + KTA L + +L+A
Sbjct: 66 RAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANAD 125
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A ++
Sbjct: 126 DATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSE 185
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
++ ++++A +++ + A Q A +L PD+
Sbjct: 186 AATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PDAVRS 242
Query: 308 KSLMEVVDFCLQR 320
L+ + +R
Sbjct: 243 PDLIALSQLICRR 255
>gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens]
Length = 1365
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
L A Y AK +L LP S K +L+ + DF Q
Sbjct: 1296 TGGLDRARRMARDYSDAAKAALGPLPASDEKAALLMMADFVAQ 1338
Score = 41.1 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 26/107 (24%)
Query: 6 DLTLKDMEKVNFLILKRIC--------------SDVEMIPDVVKYLIFSGGKR---LRPM 48
+ +D++ + I + ++ + + R RP
Sbjct: 1006 AIVGEDLKNMKQRIKALVERSLDGGGGSSSKSGGSHPLLQEAAREFFER---RERAFRPA 1062
Query: 49 LTLATALMLEYR------GDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ L A +E + LLA +E + TA ++HD V++D
Sbjct: 1063 VVLLVARAVEGTASGTTLPEKQCLLAEIVEMMCTAQVVHDSVLEDDE 1109
>gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b
[Homo sapiens]
Length = 306
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 7/194 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVFP 280
Query: 183 IAGVQNSVRQALKS 196
+
Sbjct: 281 RNECYDHATVQFAW 294
>gi|294997085|dbj|BAJ05823.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
Length = 412
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/290 (18%), Positives = 99/290 (34%), Gaps = 5/290 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ +Y+ GK R L A +L+ ++ A+ +H ++L
Sbjct: 122 RSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITTAVGMLHDSSL 181
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +F+ + + + + + +
Sbjct: 182 LVDDVQDSSELRRGFPVAHNIFGVPQTINSANFIYYAQLQELQKLGNPSIISVFADELVS 241
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L ED + L+ S
Sbjct: 242 LHRGQGMDLFWRDKLTCPTEDDYLEMVGNKTGGLFRLG--IKLMQAESPSSSLDCVPLVN 299
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ K + ED GK + PVI + + +
Sbjct: 300 LIGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVIHSIRANPANMQLINILKQKT 359
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
I VE +KA M + T +A+ L DS ++
Sbjct: 360 TDIQVE--RKAVSYMESTGSFEYTREVVSILIARARQMSSQL-DSVVAEA 406
>gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58]
gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58]
Length = 293
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 25/282 (8%)
Query: 14 KVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+ I + + + I V+Y + +GGKR+RP+L A + D + A A
Sbjct: 13 AIEAAIEESLDEFGESEKTIRAPVEYALKTGGKRIRPLLVCMLAHGIGKHCD-VMDSALA 71
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+EF HT+TL+ DD +D+ RRG+ V+G ++L L+ A+ + +
Sbjct: 72 VEFAHTSTLIADDLPCMDNDDERRGRPTVHKVFGEALALLASYALIPAAYSHFHKNAKKL 131
Query: 129 ALEALSLVACTLAEGEL---------------RQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
+ + A +A + Q + E ++ KT LF
Sbjct: 132 KKQGYNPQAIDVAYDIILEVTNRNIGCAGVLGGQYDDMFFSNKGREHVQSIMVKKTGALF 191
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A L G ++ + + + G+ FQ+ DD LDY + +G N F +
Sbjct: 192 EIASVSGWLFGGGSPNLLPQIIEFSRHFGLLFQIKDDFLDYEKDREHIGLNYIVLFGENE 251
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ + + ++ L+ MR
Sbjct: 252 ----ALKLLETSANTCLSILETLSKYDLKDHSELEALINFMR 289
>gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
Length = 294
Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/321 (16%), Positives = 99/321 (30%), Gaps = 50/321 (15%)
Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+D+ + I + + + + ++Y +GGK LR L + +A + A
Sbjct: 17 ARDLAQ--AQIEAALSAHKGPVAEAMRYAC-TGGKGLRGFLVIESARLHGIAPGMAAPAA 73
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-------VGDFLLSQAFCMV 121
AIE +H +L+HDD+ + + +
Sbjct: 74 GAIEALHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIGHLPC 133
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
+ +L+ A + L ++ + + + +
Sbjct: 134 SAEARLSLMTSLAGAAGVGGMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAM 193
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + AL Y +LG+AFQ+ DD+LD G+ +GK +G+D GK T +L
Sbjct: 194 AGPRMAGADATALGQYAKHLGLAFQIADDILDVEGDAETVGKAVGKDDAAGKATFVSLL- 252
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
L + RA A D+L
Sbjct: 253 -------------------------------------GLDGAKTRAAELVDMACDALSDY 275
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
+SL F + R +
Sbjct: 276 --GQEAQSLRAAAAFVIARDS 294
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + G KR P++ +A + AC
Sbjct: 44 ITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGGDRLAAFPTAC 103
Query: 70 AIEFIHTATLLHDDVVDDSA 89
A+E +H A+L+HDD+
Sbjct: 104 ALEMVHAASLIHDDLPCMDD 123
>gi|329904645|ref|ZP_08273892.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547880|gb|EGF32635.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 281
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L L M ++ + S + + + + SGG+R+R L L A L
Sbjct: 6 DSLSALVETRMAELARV------SLPSTLVGALSHHLDSGGQRVRARLALYAAQALHLSD 59
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
D+ V +A +E +H A+L+HDD+ D RRG +G ++ GD LLS A+ +
Sbjct: 60 DDAVTIAVTVELLHNASLIHDDLQDRDVQRRGCATLWSAFGENVAICAGDLLLSAAYGNL 119
Query: 122 IETKS 126
Sbjct: 120 CRFSD 124
>gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens]
Length = 306
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 7/194 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 101 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 160
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 161 SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 221 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVFP 280
Query: 183 IAGVQNSVRQALKS 196
+
Sbjct: 281 RNECYDHATVQFAW 294
>gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum]
Length = 209
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 26 DVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGD-------------NHVLLACA 70
+V + +Y G GKR RP + L A L +A
Sbjct: 1 EVPKLAAAAEYFFKFGVEGKRFRPTVLLLMATALNVHLPIPNSVPVSTELRARQQRIAEI 60
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
E IH A+LLHDDV+DD+ RRG + LV GN+ +VL GDFLLS+A + ++ E +
Sbjct: 61 TEMIHVASLLHDDVLDDADTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALASLRNTEVV 120
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
L+ V L GE Q++ + + E Y+ KTA L S + + +L+AG V
Sbjct: 121 SLLATVVEHLVTGETMQMTTTSEQRCSMEYYMQKTYYKTASLISNSCKAVALLAGQTTEV 180
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEV 218
YG NLG+AFQL+DDVLD+ G
Sbjct: 181 ATLAFEYGRNLGLAFQLIDDVLDFTGTS 208
>gi|189238015|ref|XP_970186.2| PREDICTED: similar to AGAP006016-PA [Tribolium castaneum]
Length = 401
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 58/350 (16%), Positives = 110/350 (31%), Gaps = 44/350 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR------PMLTLATALM 56
L + ++ V I K I ++ ++ K LI LR ++ L + +
Sbjct: 53 SLRWILNDEIANVATHIRKLIGTNHPLLKTA-KNLI------LRNEQPTWGLIVLLVSKL 105
Query: 57 LEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ ++A E I T+ L+H +++ + L +G
Sbjct: 106 AGLNSKFSELECDRTADILHSQRIIAEVTEMIRTSHLIHKGLINLEPHDKNFS--DLNFG 163
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT----E 158
N+ ++L GD+LLS +F V + K+ E +S LAE E L N +
Sbjct: 164 NKLALLSGDYLLSSSFNEVAKLKNFHVQETISSTLRDLAESEFIGLRNKHNEPIPSKPLP 223
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
I + V V + + L+ + R +
Sbjct: 224 VQENINIPLEFGVKPFKLEHVLGNMRAEWTLRNVLSGGSLLGKCCQCALILANHESRVQE 283
Query: 219 -----------NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
E FR K +L + + + N
Sbjct: 284 LGYSFGRNLALAWQAALEKELFREEKFSLVSAPVMLHLETDSSFYKEIEKGLSEDHEINY 343
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ I+ L T + ++A D+L P++ K +L+ +V+
Sbjct: 344 DQVRKIVLGGPGLEKTAQLQSEFTEEALDTLDKFPNNESKVALVNIVNSL 393
>gi|270008056|gb|EFA04504.1| hypothetical protein TcasGA2_TC014812 [Tribolium castaneum]
Length = 393
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 58/350 (16%), Positives = 110/350 (31%), Gaps = 44/350 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR------PMLTLATALM 56
L + ++ V I K I ++ ++ K LI LR ++ L + +
Sbjct: 53 SLRWILNDEIANVATHIRKLIGTNHPLLKTA-KNLI------LRNEQPTWGLIVLLVSKL 105
Query: 57 LEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ ++A E I T+ L+H +++ + L +G
Sbjct: 106 AGLNSKFSELECDRTADILHSQRIIAEVTEMIRTSHLIHKGLINLEPHDKNFS--DLNFG 163
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT----E 158
N+ ++L GD+LLS +F V + K+ E +S LAE E L N +
Sbjct: 164 NKLALLSGDYLLSSSFNEVAKLKNFHVQETISSTLRDLAESEFIGLRNKHNEPIPSKPLP 223
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
I + V V + + L+ + R +
Sbjct: 224 VQENINIPLEFGVKPFKLEHVLGNMRAEWTLRNVLSGGSLLGKCCQCALILANHESRVQE 283
Query: 219 -----------NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267
E FR K +L + + + N
Sbjct: 284 LGYSFGRNLALAWQAALEKELFREEKFSLVSAPVMLHLETDSSFYKEIEKGLSEDHEINY 343
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ I+ L T + ++A D+L P++ K +L+ +V+
Sbjct: 344 DQVRKIVLGGPGLEKTAQLQSEFTEEALDTLDKFPNNESKVALVNIVNSL 393
>gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405]
Length = 291
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQIKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LIA Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-------LAFQ 243
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P F
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ N + S ++K +R N
Sbjct: 257 QTLDEAVNILTDLEEKPEFSGGKIQKIIESLRLNG 291
>gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
Length = 329
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 63/293 (21%), Positives = 110/293 (37%), Gaps = 10/293 (3%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
++ GGK LR L + TA + +A A+E L+HDD+ DDS RRG
Sbjct: 34 LRDYPERGGKMLRGRLVVLTARAYGDDT-AALGVAAALELFQNWVLVHDDIEDDSDERRG 92
Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQLSLS 151
+ A + ++ GD L + + ++ E ++ + E LV T + L
Sbjct: 93 RPALHRLVPMPLALNAGDALHAAMWRLLAEAGARRKVLLEFAELVETTASGQHLDLSWTL 152
Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ D + + A ++A + A G+ LG+AFQ+VDDV
Sbjct: 153 EGRFDLTPDDYLEMVRRKAAYYTAVAPLRLGALVAGRMPDPAFARAGLELGVAFQIVDDV 212
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--KISVENLKK 269
L+ G+ GK D GK TL ++ E+ ++ + + +
Sbjct: 213 LNLEGDPAAYGKEAAGDLWEGKRTLILLDWLASAAPEERARAEALLRRPRAEKDPAEVAW 272
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLR----CLPDSS-WKKSLMEVVDFC 317
+ + A+ RA + A L LP +++L +
Sbjct: 273 LHERLLASGAVARARERARRMAEPALAELERAFAPLPGREAAREALDLLAALV 325
>gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Ralstonia solanacearum CMR15]
Length = 299
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAHWMASVVARTESALERALPGELVAPQRLHAAMRYATLGAGKRVRPLLAHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E + ++CA+E IH +L+H
Sbjct: 61 EASPEALDGVSCAVEMIHAYSLVH 84
>gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
Length = 289
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 9 LKDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNH 64
++ +N I + ++I + V Y + +GGKR+RP+L L + H
Sbjct: 2 KDKIKSINQAIKHYYAQTHVSQDLI-EAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAH 60
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+A ++E IHT +L+HDD+ +
Sbjct: 61 YQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNH 96
>gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000]
gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase)
protein [Ralstonia solanacearum GMI1000]
Length = 299
Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M + + + + + + + + ++Y GKR+RP+L A +
Sbjct: 1 MSDFAHWMASVVARTESALERALPGESVAPQRLHAAMRYATLGAGKRVRPLLAHAAGALG 60
Query: 58 EYRGDNHVLLACAIEFIHTATLLH 81
E + ++CA+E IH +L+H
Sbjct: 61 EASPEALDGVSCAVEMIHAYSLVH 84
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+N + + + I + ++Y + + G KR P++ +A + ACA+E
Sbjct: 54 INQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPTACALE 113
Query: 73 FIHTATLLHDDVVDDSA 89
+H A+L+HDD+
Sbjct: 114 MVHAASLIHDDLPCMDD 130
>gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea sp. MED297]
gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea sp. MED297]
Length = 293
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 56/334 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
LE + + + + V + + + Y + +GGKRLRP L A + ++
Sbjct: 2 TLETFLTETKSSLESALTQSFQQGVSDELTSAIHYSLLNGGKRLRPSLVRAASDLVRAPD 61
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF- 118
++ A A+E IH +L+H +DD LRRGK + T++L GD L S+AF
Sbjct: 62 GLWLIPAQALEMIHVYSLVHDDLPAMDDDDLRRGKPTCHRQFSEATAILAGDALQSEAFA 121
Query: 119 -------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + L A S A + G++ L+ + E A+
Sbjct: 122 LIAGAEALSPRQIRDMVRLLAQSAGARGMVGGQMIDLASEQKTLTLNELSDLHRLKTGAL 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + V + L YG +G+AFQ+ DD+LD G ++GK G D
Sbjct: 182 ISASLQLGALCHDSVDVEILARLARYGDAIGLAFQIADDILDVTGTTEKLGKPQGSDLAA 241
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T +L + A
Sbjct: 242 EKSTYVKLL--------------------------------------GVDGARSEALRQI 263
Query: 292 QKAKDSLRCLP---DSSWKKSLMEVVDFCLQRLN 322
AK+ L L DS L ++ D+ ++R +
Sbjct: 264 DCAKNELTALKLGHDS----MLWQLADYIIERDH 293
>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLACAI 71
++N + + + I + ++Y + + G KR P++ +A + ACA+
Sbjct: 64 EINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACAL 123
Query: 72 EFIHTATLLHDDVVDDSA 89
E +H A+L+HDD+
Sbjct: 124 EMVHAASLIHDDLPCMDD 141
>gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7]
gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7]
Length = 304
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 18/251 (7%)
Query: 8 TLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALM-------L 57
++ + ++ + + + E + + ++Y + GGKR+R L A
Sbjct: 12 LDDRVQHIEAVLDQVLPQETVVPESLHEAMRYAVLGGGKRVRAALVYAAGEAALQSGTPA 71
Query: 58 EYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ A A+E IH +L+HDD +DD LRRG+ + + T++L GD L
Sbjct: 72 SAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEATAMLAGDALQP 131
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD------VTEEDYLHVIKSKT 169
AF ++ AL + + G L + +++E + KT
Sbjct: 132 LAFELLGLMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALSKEQLQQMHSMKT 191
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
+ A++ + ++AG ++VRQ L+ Y +G+AFQ+VDD+LD + +GK G+D
Sbjct: 192 GAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTADTVTLGKTAGKDA 251
Query: 230 RNGKPTLPVIL 240
KPT I+
Sbjct: 252 AGNKPTYVSIM 262
>gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
Length = 659
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 28/315 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATAL-MLEYRG-------------DNHVLLACAIEFIHTAT 78
+ + GGK RP +TLA M+ G D A +IE H A+
Sbjct: 320 IALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKAS 379
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
L+HDD+ D A R G+ A +G T++ VGD+L+ + ++ + ++A + V
Sbjct: 380 LVHDDIEDGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAGTRVDL 439
Query: 139 TLAEGELRQ-----------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ +K+ +T D L + KT+ F AAL +AG
Sbjct: 440 LDSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDA 499
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+++ ++ + NLG+AFQ+++D+ D+ G+ + G D G+PTL LA Q
Sbjct: 500 SALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK-LTAGADVIGGRPTLLWALALQHLDD 558
Query: 248 REKNFWKSTINDGKI--SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+K + E L + + + + +A+ + + S
Sbjct: 559 EDKQTLLALAEPDCELSDRERLTTVRRLYEKANVFEMSLQLIDKHQARAEQVADEIENES 618
Query: 306 WKKSLMEVVDFCLQR 320
++ L +VD L+R
Sbjct: 619 LRRLLYFLVDTVLER 633
>gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 371
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 33/324 (10%)
Query: 2 KMLEDLTLKDMEKVNFL---ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
++++ + + + + D + L +GGKRLR +L
Sbjct: 16 DRFRAAVADALDRLLAEHRDLARDVHPLTAPLVDAIADLT-AGGKRLRAVLAWLGWRAAG 74
Query: 59 YRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN------------- 103
+ A E A L+HDD++D S RRG + + +
Sbjct: 75 GEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRRGMPSVHRRFESLHREAGWRHAAEH 134
Query: 104 --------------QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
S +L+ E + + L +
Sbjct: 135 FGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELERMRFGVMAGQYLDVVAEMAPA 194
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ V L + L+AG + + A + G+AFQ D
Sbjct: 195 ARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLPFGMAFQYRD 254
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+L G+ GK G+D R GK T+ + A + E + + D + + +
Sbjct: 255 DLLGVFGDPATTGKPAGDDLREGKQTVLIARAVELLAPDEAAALDADLGDPDLGADRVAH 314
Query: 270 AFIIMRENRALVDTEYRAYSYGQK 293
++ A E R + +
Sbjct: 315 WQGVLEACGARRAVEERVAALSHE 338
>gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 290
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLL 67
++ + + ++ + ++Y +F GG R+RP L LA A
Sbjct: 6 RIERALDVAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVARACGDDDPAASDAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A AIE +H A+L+HDD DD+ +RR K + + +G ++L GD L+ AF
Sbjct: 66 AAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIALLAGDALIVLAFE 119
>gi|297291452|ref|XP_002803898.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2
[Macaca mulatta]
Length = 297
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K ++ + + +G KA ++L P S + +L +V F + R +
Sbjct: 242 DYAKLRERIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 297
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 27/138 (19%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSRNSLQ-----LRGLVVLLISKA 122
Query: 57 LE---------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAF 118
+GN+ ++L GDFLL+ A
Sbjct: 183 FGNKIAILSGDFLLANAC 200
>gi|194383898|dbj|BAG59307.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K ++ + + +G KA ++L P S + +L +V F + R +
Sbjct: 242 DYAKLRERIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 297
>gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353]
Length = 291
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ D + +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGDLLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S ++K +R N
Sbjct: 257 QTLDEAVDILTDLEEKTEFSGGEIQKIIESLRLNG 291
>gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
Length = 348
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 63/335 (18%), Positives = 126/335 (37%), Gaps = 32/335 (9%)
Query: 11 DMEKVNFLILKRIC---------------------SDVEMIPDVVKYLIFSGGKRLRPML 49
+++K+ ++ K + +E + L+ GGKR RP+L
Sbjct: 8 ELQKIESVLQKNLPDAPGAGWNENIFGTLPGCVTEKHIEQLSSPCAALLKLGGKRWRPLL 67
Query: 50 TLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
A + + +EF+HTA+L+HDD+ D + RRG AA + WG T+
Sbjct: 68 LTLCAAAAAGTEESPEAAYEITPLVEFVHTASLIHDDIEDCADTRRGMPAAHITWGIDTA 127
Query: 107 VLVGDFLLSQAFCMVIETK-------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159
+ G +L A + + L A L L + + +
Sbjct: 128 INAGSWLYFTAAACLTNVPLPAERKLALYRLYAEELRRLHLGQAMDIAWHKDNTALPSVQ 187
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+Y +++ KT L + A + +L+ G + + ++G+ FQ++DDVL+
Sbjct: 188 EYEAMVRMKTGTLAALAAKAGTLVGGGTAEQESVMGNAAADIGVGFQILDDVLNLTTGNI 247
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ + + LA Q + I +++ ++ + A
Sbjct: 248 GKKRGDDIVEGKKSLPVLIHLAEQPQDFDTIMACFTQARKDGIESPAVERCVTMLTASGA 307
Query: 280 LVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEV 313
+ RA + ++A + L PDS+ + + +
Sbjct: 308 VAAAHTRARTLIRQACAKVTGLYPDSAAARKIDAL 342
>gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC413]
Length = 302
Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLL 67
+ + + + + + E + ++ + GKR+RP+L + A L YR + +
Sbjct: 20 LAIIEQRLDRLLPVESERDCVGLAMREGALAPGKRIRPVLLMLAAHDLGYRDELSGLLDF 79
Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD+ +DD+ LRRG+ +G ++L LLS+AF
Sbjct: 80 ACAVEMVHAASLILDDIPCMDDAELRRGRPTIHRQFGEPVAILAAVALLSRAF 132
>gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
proteobacterium]
Length = 295
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 9/244 (3%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ I + + ++Y + GG R+RP + ++ A A
Sbjct: 6 RIEAAISDAVNLGQTAPSPAKLASALRYAVSPGGARIRPTILMSVAAACGDDRPELTNAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A E IH A+L+HDD DD+ RRGK + + +VL GD L+ AF ++
Sbjct: 66 AAALECIHCASLVHDDLPCFDDAETRRGKPSLHRAYSEPLAVLAGDSLIVMAFQILTRHA 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S + A+ L+ + + + +E+ + A + + + + A
Sbjct: 126 SIDPQRAIGLMNILAEQTGMPNGICAGQGWESEQKIDLRAYHR-AKTGALFVAATQMGAI 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
G +G AFQ+ DD+ D E+GK G+D +G+P +
Sbjct: 185 AAGQDGAQWDELGSRIGEAFQVADDLRDALYNEAELGKPAGQDDLHGRPNAVAEYGIEGA 244
Query: 246 TKRE 249
Sbjct: 245 ISHM 248
>gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678]
gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059]
Length = 291
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LIAGV+ SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKTIHANKTGKLLTYPFVAAGLIAGVEQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S E ++K +R N
Sbjct: 257 QTLDEAVDILKDLEEKTEFSGEEIQKIIESLRLNG 291
>gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 355
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 68/348 (19%), Positives = 131/348 (37%), Gaps = 35/348 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
++ + +++ + + + ++ GGKR RP+L ++ L+
Sbjct: 13 DIDSAIEGALSRLDRRLGQH-GDGARALASAIRRAAE-GGKRFRPLLVVSAFDTLDGPDI 70
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV------------ 107
+A A E +HTA ++HDDV+D RRG + ++ +
Sbjct: 71 ARPALYQVAAAFELLHTAFVVHDDVIDHDVERRGMPNVGGEFRSRGTERGADAAGAALLG 130
Query: 108 ------------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
L++ A + L +++ E + ++S
Sbjct: 131 DAAGILAGDLLLHEAARLVAMAEIPTDLRRELLLLVEDAVLVSAAGELADVENAVSAGDI 190
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ FSA LE +++AG + VR AL+ +G LG+A+QLVDD++
Sbjct: 191 DADTILRTTHDKTAVYSFSAPLEAGAVLAGAEAPVRHALQRFGQRLGLAYQLVDDLIGAF 250
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G GK+ G D R K T ++LA + + ++ A +
Sbjct: 251 GSAATAGKDEGSDLREAKKTHLIVLAR---ESETWPEVSDALANAHTGPVAIRAAQTALS 307
Query: 276 ENRALVDTEYRAYSYGQKAKD--SLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A V E +A+ + LP+ + L+++VD +R+
Sbjct: 308 ASGARVRLEQLVRDTLDEARGIVAASTLPE-DCQAMLLDLVDAVQERV 354
>gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 338
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY----RGDNHVLL 67
++ V + + + I +LI +GGKR+RP++ LATAL L D V
Sbjct: 16 LQAVEEGLRRAATTTDPDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVRG 75
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H A+L HDDV+D+++ RRG +A +GN +V+ GDFLL++A + +
Sbjct: 76 AVAVELVHLASLYHDDVMDEASERRGVSSANARFGNLIAVVTGDFLLARAA-GIAARLGE 134
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
E AL+ + EG++ +++ + L T E YL I KTA L A + +++ G
Sbjct: 135 EVAAALADTLAAMCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAARIPAIVLGRD 194
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ AL + G LG+ FQL DDVLD ++GK +D G TLPVILA
Sbjct: 195 QAMLDALSAAGTALGMLFQLRDDVLDLVATREQLGKEPAQDLVEGIYTLPVILA---LHD 251
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ E A ++R + + T +
Sbjct: 252 PTVREALLDVLPRAADPEPRAVALSLVRRSDGIPGTLGQMRR 293
>gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160]
Length = 291
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ D + +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ + S ++K +R N
Sbjct: 257 HTLDEAVLILSDLEEKTEFSGGKIQKIIESLRLNG 291
>gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056]
Length = 291
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + LIA V+ V
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKTIHANKTGKLLMYPFVAAGLIAEVEYFV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S ++K +R N
Sbjct: 257 QTLDEAVDILTDLEEKTEFSGGEIQKIIESLRLNG 291
>gi|47097726|ref|ZP_00235227.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 1/2a F6854]
gi|47013897|gb|EAL04929.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 1/2a F6854]
Length = 116
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVK-YLIFSGGKRLRPMLTLATAL-MLE 58
+ L KD++ V + K + +L+ +GGKR+RPM +A
Sbjct: 3 LNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAAN 62
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ + AIE IH A+++HDDVVDD+ LRRG+ + GN ++ GDF
Sbjct: 63 ADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKCGNHIAMYTGDF 116
>gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355]
Length = 291
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ +EK+ I S + +V+ Y + +GGKR+RP+L L + H
Sbjct: 4 NEKLEKIGLTIEDFYKSQQVSPDLSEVILYSVQAGGKRIRPLLLLELIQAFGLELTEAHY 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ + + L LL++
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLAR 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + +L+ + + G++ + ++ ED ++ +KT L +
Sbjct: 124 AELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKNIHANKTGKLLTYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T
Sbjct: 183 FVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTY 242
Query: 237 PVILAFQRGTKREKNFWK-------STINDGKISVENLKKAFIIMRENR 278
P L K S ++K +R N
Sbjct: 243 PAFLGLDGAKNFFNQTLDEAVDILTDLEEKTKFSGGVIQKIIESLRLNG 291
>gi|315304982|ref|ZP_07875058.1| polyprenyl synthetase [Listeria ivanovii FSL F6-596]
gi|313626647|gb|EFR95704.1| polyprenyl synthetase [Listeria ivanovii FSL F6-596]
Length = 97
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 24/60 (40%)
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ ++ ++ + + A Y KA ++ LP ++++ + + L R
Sbjct: 36 DMTDAASEQVLALISKYNGVEQAFKLANKYTNKALREIKKLPATTYRDDMYRLTKSILDR 95
>gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi]
gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi]
Length = 334
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 60/292 (20%), Positives = 106/292 (36%), Gaps = 9/292 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-----HVLLACAIEFIHTATLLHD 82
+ I + + + GGK R +L + L R D +A +E + + L+ D
Sbjct: 35 DRIDKLFDHSVC-GGKYKRSILLVEAYKALGGRQDEERMKMVTNIAACLELLQSFFLIED 93
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEALSLVACTL 140
DV+D+ RRGK + G + + LL S + +A
Sbjct: 94 DVMDEGVNRRGKPCWHRLEGIGINGINDGLLLDCMVSYILRSNRVSADVRDAFDEARRVT 153
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
G++ D T + + + + KT+ + + Q + + +K
Sbjct: 154 ILGQILDGDTKSVEDCTWQRHQSITQHKTSHYTYFTPLQIAALLTAQPLIIEPVKRIAYL 213
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG FQ DD +D G+ + GK G D R K T A ++ T + + G
Sbjct: 214 LGYLFQSKDDYMDCFGDKSITGKV-GNDLREAKCTWVTCKAMEKLTHQPSFLTDFQEHFG 272
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
K S+ + +K I+ R D Y + +S+ P + L +
Sbjct: 273 KRSITSEQKLKDILTHLRVADDFHLFRERYAGEILNSIDHFPMIDLRPVLRQ 324
>gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
Length = 286
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 62/329 (18%), Positives = 124/329 (37%), Gaps = 54/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M E ++ +N + I + E++ + + Y + + GK++RP+ L
Sbjct: 1 MNSFEQFINENRNSLNIYAKEYIENLEIPELLKESIIYSLVNDGKKIRPLSFLYLLKFYN 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ +A AIE +HT +L+HDD+ + R GK V+G +VL GD +L+
Sbjct: 61 IDYKEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKPTNHRVYGQDIAVLTGDSMLTL 120
Query: 117 AFC-----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
AF + +T ++ + + + + + + + +YL ++ S
Sbjct: 121 AFEVLSKSNINDTLKVNLIQQFANYSGAMGMIAGQVYDVKQKNYQVDANYLKLMHSLKTG 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + S ++S+G LGIA+Q+ DD+LDY GE ++GK
Sbjct: 181 RLIELPLDFACKIARKESDLDYIRSFGKELGIAYQIKDDILDYYGEFEKIGKLP------ 234
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
S E++ + + + +
Sbjct: 235 -------------------------------SDEDMITYLSFY----GIDECKELLEKHT 259
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + R L ++ L + ++ L+R
Sbjct: 260 TNAIEISRELENN----LLEDFANYLLKR 284
>gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
Length = 289
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 13 EKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL- 66
++++ + + I + +I D ++Y +F GG R+RP L LA AL +
Sbjct: 5 KRIDRNLEQAITFATAGGNPSIICDALRYSVFPGGARIRPRLCLAVALAEGDEAPSASNA 64
Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A AIE +H A+L+HDD+ RRGK + +G T+VL GD L+ AF +
Sbjct: 65 AATAIELLHCASLVHDDLPCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAFETIARE 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L+ + ++ +E+ + + A S + ++ A
Sbjct: 125 CLATPDRIAPLIGVIGRAVGMPHGIIAGQAWESEKSIDLKVYHR-AKTSSLFIGSTTAGA 183
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ Q G LG AFQ+ DD+ D+ E+GK G+D + +P
Sbjct: 184 IAAGADPQNWYRLGEALGDAFQVADDLRDFASSPEEIGKPCGQDAAHDRPNAVH 237
>gi|26376318|dbj|BAB28153.2| unnamed protein product [Mus musculus]
gi|220941794|emb|CAX15883.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
Length = 280
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + D+ +Y GK RP++ + A +N
Sbjct: 95 RDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQA 154
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 155 SQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA 214
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + +
Sbjct: 215 RIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVCT 274
Query: 183 IA 184
Sbjct: 275 FC 276
>gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine
crenarchaeote HF4000_APKG10F15]
Length = 100
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 9 LKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++K+N ++ + ++ E + +KY + GGKR+RP++ L + + DN
Sbjct: 6 SAYIKKINNVLDSELELYTESEF-KEPLKYAL-GGGKRIRPIILLLASECVGEIDDNTFA 63
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
ACAIEF+HT +++HDD++D+ +RR K + +G
Sbjct: 64 AACAIEFLHTESVIHDDIIDNETIRRQKDPFHIKYGY 100
>gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens]
Length = 318
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 60/299 (20%), Positives = 104/299 (34%), Gaps = 61/299 (20%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+D++ + I K + ++ +Y GK R ++ + A +N +
Sbjct: 55 RDLKGLYEGIRKEPLISTTELKEISEYYFDVKGKAFRSIIVVLMARACNIHHNNSRHVQA 114
Query: 70 AI-------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ E IHTA+L+HDDV+D++ R+GK + +
Sbjct: 115 SQRATALIAEMIHTASLVHDDVIDNARSRKGKHTRSGLGSKENE---------------- 158
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
YL TA L + + + S+
Sbjct: 159 --------------------------------HERFAQYLEKTFKNTASLIANSCKAVSV 186
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ V + YG N+GIAFQL+DDV D+ N +GK D T PV+ A
Sbjct: 187 LGCPDPVVHEITYQYGKNVGIAFQLIDDVFDFTSCSN-IGKPTSADVNLRLATGPVLFAC 245
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
Q+ + + G ++ +A + ++ + T Y A Y +A L
Sbjct: 246 QQFPEMNAMIMRWFSLPG-----DVDRAPQYVLQSDGVKQTTYLAQQYCHEAIRESSKL 299
>gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1]
gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1]
Length = 264
Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 71/300 (23%), Positives = 111/300 (37%), Gaps = 51/300 (17%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91
+ Y GGKRLRP L AT ML + + A A+E IH +L+HDD+ LR
Sbjct: 1 MHYGALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----------CTLA 141
RG+ + +G T++L GD L + AF ++ + L+ +
Sbjct: 61 RGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMC 120
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L+ ++ A++ SA + L Y +
Sbjct: 121 GGQALDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAI 180
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD G+ +GK G D GK T P +L
Sbjct: 181 GLAFQVQDDILDVIGDTAVIGKRQGADQDLGKSTYPSLL--------------------- 219
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW-KKSLMEVVDFCLQR 320
L +A Q+A D+L L S+ +L + F ++R
Sbjct: 220 -----------------GLESARAKARDLYQEALDALELLAAHSYNTTALQALASFIIER 262
>gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens]
Length = 297
Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--- 66
+D++ + I K + + ++ +Y GK RP++ A +N
Sbjct: 108 RDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA 167
Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A +
Sbjct: 168 SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 227
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ + L+ V L GE QL +N + YL KTA L + + + L
Sbjct: 228 RIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVCL 287
Query: 183 I 183
Sbjct: 288 C 288
>gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219]
gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219]
Length = 276
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 15 VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+ + + + ++ ++Y + + GKR+RP + T + + ACA+E+
Sbjct: 2 FESYLQQSLSIYEDGVLKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEY 61
Query: 74 IHTATLLHDDVVDDSA 89
IHT +L+HDD+
Sbjct: 62 IHTYSLIHDDLPAMDD 77
>gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36]
gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis
SK36]
Length = 291
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LAEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S ++K +R N
Sbjct: 257 QTLDEAVDILTDLEEKTEFSGGEIQKIIESLRLNG 291
>gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
Length = 284
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/329 (18%), Positives = 126/329 (38%), Gaps = 58/329 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+E++ + +N + + + + +++ D + Y + S GKR+R L L M +
Sbjct: 1 MIENILKEKRNLINKHLAGLLKTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ +A ++E +HT +L+HDD +D+ RRG + +G ++ GD LL+ A
Sbjct: 61 DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120
Query: 118 FCMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ + K + +N + ++ + K KT
Sbjct: 121 FQLISQAKFSAEDRCKLIEILSIAAGAEGMVAGQVHDIQIENKSIELDELKLLDKFKTGR 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++++ + + S L+ + +LG+ FQ+ DD+LDY+ + NE+ + +
Sbjct: 181 MIKTPVDMAIQLTHMSISDADQLRKFAKHLGLLFQITDDILDYKEDNNEIKNTHKNTYVS 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
L + A
Sbjct: 241 LL---------------------------------------------GLEKAKLSAEETA 255
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA ++L + S+ L E+V + L R
Sbjct: 256 YKAIEALELMQVDSY--ILTELVLYILNR 282
>gi|218437764|ref|YP_002376093.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170492|gb|ACK69225.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 341
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 9/262 (3%)
Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
+A + + + L A+ + + DD+ D +
Sbjct: 45 VVAACKAVGGDPNQTIPLCAALLASAISIRILDDLQDQDKPNALHHVIGSASALNYADTF 104
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ ++ K+ + + + ++ + E D I+ KT
Sbjct: 105 KTLAFKIIGDLSLKNKADGSPLYQAFIDGYFTLLAGQERDIQGMSRTWE-DCWQTIEMKT 163
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
++ A + ++I Q K YG +LG+A Q+ +D+ D
Sbjct: 164 GYSYAMATALGAMIGTNHQEWIQICKIYGYHLGLAIQIFNDL------EGIWQPVGKSDL 217
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
GK TLP++ + + + I ++ I+ + A + A
Sbjct: 218 HRGKITLPLLYGLECSHPDREELLSIIEDHQIIVKS--QRIKEILDKIEAKNYLIWMALQ 275
Query: 290 YGQKAKDSLRCLPDSSWKKSLM 311
+ A ++ PD KK+L
Sbjct: 276 HRDCALQIIKVFPDEEGKKALE 297
>gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC404]
Length = 301
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLLA 68
+ + + + E + ++ + + GKR+RP+L + A L D+ + +A
Sbjct: 20 AALQRRLDELLPVGDERDRVSSAMREGVLAPGKRIRPLLLILAARDLGCDRDHPGLLDMA 79
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
CA+E +H ++L+ DD+ +D++ALRRG+ +G ++L LLS AF
Sbjct: 80 CAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAF 131
>gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681]
gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Paenibacillus polymyxa E681]
Length = 792
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 65/301 (21%), Positives = 112/301 (37%), Gaps = 48/301 (15%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + D Y + GKR+RP+LT V L ++E++HTA+L+ DD+
Sbjct: 530 EQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDASAIVPLLRSLEYMHTASLIFDDLPS 589
Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACT 139
RRG+ V + T+ L G +L+ +A A S
Sbjct: 590 QDNASTRRGRQTLHKVHNSATAELTGLYLIQKAIGEQSSLSQFNAETVLALIQYSAQKAE 649
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
SK +T E + KT V F A L + +++A + AL+ +
Sbjct: 650 DMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQAEEPEIAALQKFAY 709
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++GIAFQ+ DD+LD G++ +GK +G+D N IL + ++ +
Sbjct: 710 HMGIAFQIKDDLLDVEGDMLLLGKPVGQDSDNNNSNFVSILGLEGASQEMWEHYC----- 764
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
A ++L +P + L ++ + +
Sbjct: 765 ---------------------------------LAMEALEEIPRNIA--FLKHLIHYVVN 789
Query: 320 R 320
R
Sbjct: 790 R 790
>gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum]
gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 289
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTAT 78
+ ++ +++ +F GG RLRP LTLA A A AIE +H A+
Sbjct: 17 RADLPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDLPAAADAAAAAIELLHCAS 76
Query: 79 LLHDDVVDDSA 89
L+HDD+
Sbjct: 77 LVHDDLPCFDD 87
>gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
Length = 374
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/322 (18%), Positives = 106/322 (32%), Gaps = 41/322 (12%)
Query: 39 FSGGKRLRPMLTLAT-------ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
GGK +RP + L T A + + +A A E +H A L+HDDV+D R
Sbjct: 56 LRGGKLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDVIDGDLYR 115
Query: 92 RGKVAA--------------------------RLVWGNQTSVLVGDFLLSQAFCMVIETK 125
RGK+ ++ + A +
Sbjct: 116 RGKLNFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFARVDLPHPT 175
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
L+ L GE + LS + + ++ L + +
Sbjct: 176 RLRLLDLLDHTMNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLRAAAIL 235
Query: 186 V--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
Q + G +LG A+QL DD L GE E GK+ D R GK T + A
Sbjct: 236 AGLSEEDEQKVGVIGTHLGTAYQLQDDYLSTFGEAAEHGKDSFSDLREGKETTIIGFARA 295
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
R + N+ +++ ++ ++ + A + + + S+ L
Sbjct: 296 T---RYWKDIEVNFNNAELTTAQGEQIRDLLIQCGAEEYSRDTIRHHLDACRASIADLRS 352
Query: 304 SSWKKSLMEV---VDFCLQRLN 322
+ ++ + + VD R +
Sbjct: 353 NLNREVIDLLFAQVDQLDNRRS 374
>gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1]
gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058]
Length = 291
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ D + +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
+ S ++K +R N
Sbjct: 257 QTLDEAVLILSDLEEKTEFSGGKIQKIIESLRLNG 291
>gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis]
gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination
vector pL2-1]
gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector
pELR-1]
Length = 302
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLE--YRGDNHVLL 67
+ ++ + + + + E + ++ + GKR+RPML L TA L D + L
Sbjct: 20 LADIDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDL 79
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD+ LRRG+ +G ++L LLS+AF
Sbjct: 80 ACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAF 132
>gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
Length = 401
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/305 (21%), Positives = 106/305 (34%), Gaps = 28/305 (9%)
Query: 12 MEKVNFLILKRICSDVEMIPDV------------VKYLIFSGGKRLRPMLTLATALM--- 56
++ V I + E+ + + KRLRP+L +A +
Sbjct: 62 LQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGYHLTRG 121
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGD 111
A +E +HT L+HDDV D + LRRG A G +V+VGD
Sbjct: 122 GAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAALHHLLAPGRAGEDLAVVVGD 181
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVI 165
L ++A ++ + + A +A Q D
Sbjct: 182 HLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQALRVAH 241
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
F A L +++A ++ Q L+ G G+A+QL DDVL G+ GK
Sbjct: 242 LKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGDARMSGKAG 301
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDT 283
DF GK T PV+ A+ R + + + + L A ++ +
Sbjct: 302 DSDFSQGKRTFPVLAAYARASTEGRAELERLWALPAQEKDEAALGHARELVERWGGRLAC 361
Query: 284 EYRAY 288
E
Sbjct: 362 ERMVE 366
>gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
Length = 290
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 97/288 (33%), Gaps = 28/288 (9%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ I + I V+Y + SGGKR+RPML A L+ G + + A AI
Sbjct: 11 IETGIEDSLDEFGPKGFSIRAPVEYALTSGGKRIRPMLVCMIAKGLD-MGRDVLDSALAI 69
Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------- 122
EFIHT+TL+ DD+ RRG+ + +++L L+ A+ +
Sbjct: 70 EFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLK 129
Query: 123 --------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + ++ + Q + E +I KT LF
Sbjct: 130 SAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFE 189
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A L G ++ + G+ FQ+ DD+LD + ++G N F
Sbjct: 190 IACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQDDQDVGLNYALLFGVD-- 247
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+ + + G L+ +
Sbjct: 248 --AAKDLLKSSKDQCFSLINHLKQHGLKDTSELEMLIEYV---GIRDY 290
>gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1]
gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC]
Length = 293
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 97/288 (33%), Gaps = 28/288 (9%)
Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ I + I V+Y + SGGKR+RPML A L+ G + + A AI
Sbjct: 14 IETGIEDSLDEFGPKGFSIRAPVEYALTSGGKRIRPMLVCMIAKGLD-MGRDVLDSALAI 72
Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------- 122
EFIHT+TL+ DD+ RRG+ + +++L L+ A+ +
Sbjct: 73 EFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLK 132
Query: 123 --------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + ++ + Q + E +I KT LF
Sbjct: 133 SAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFE 192
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A L G ++ + G+ FQ+ DD+LD + ++G N F
Sbjct: 193 IACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQDDQDVGLNYALLFGVD-- 250
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+ + + G L+ +
Sbjct: 251 --AAKDLLKSSKDQCFSLINHLKQHGLKDTSELEMLIEYV---GIRDY 293
>gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 297
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 13/280 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
++ +K+ L+ + + D ++Y I GGK +R L A +
Sbjct: 9 LQENSQKIESLLNDLLSHQSSYLNDRLRSAIRYAIL-GGKNIRSFLVAECASLFGLSNPT 67
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ + AIE +H +L+HDD+ +RRGK L + T++L G+ LL+ AF ++
Sbjct: 68 VLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAGNSLLTYAFEII 127
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV------IKSKTAVLFSA 175
++Q S + +LA Q L + + + L + KT L
Sbjct: 128 CSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTIQEMKTGSLMRF 187
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A E ++IA + L+ YG NLGI FQLVDD+LD+ + K ++ +
Sbjct: 188 ACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEENCATIEKKSAKNATTKNNS 247
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
I + + + K I + + IM
Sbjct: 248 FVKIKGQEWIRQEIDQYNKKMIKILSSHGKKAQSLIDIMH 287
>gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49]
Length = 291
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQIKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LIA Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-------LAFQ 243
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P F
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
+ N + S ++K +R N
Sbjct: 257 QTLDEAVNILTDLEEKTEFSGGKIQKIIESLRLNG 291
>gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
Length = 325
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 106/312 (33%), Gaps = 15/312 (4%)
Query: 17 FLILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
IL R+ + E I + + + GK +R L A L L D ++A
Sbjct: 5 DNILDRLSREPEWSPEFESAILEPFTFTTSNPGKEIRGKLIDAFNLWLNVPDDKLQVIAK 64
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+ +H A+L+ DD+ DDS LRRG A ++G ++ +++ AF + ++
Sbjct: 65 IVNMLHAASLMVDDIEDDSQLRRGNPVAHKIYGIPQTINSANYVYFLAFQELFALRNGPT 124
Query: 130 LEALSLVACTLAEGELRQLSLS-----KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E ++ + ++ L + ++A
Sbjct: 125 PPRQDIDQMVTQELLSLHRGQGLEILWRDSLQCPTEEQYIDMVSNKTGGLLRLGIKLMMA 184
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ G+ FQ+ DD+++ + K ED GK + PV+
Sbjct: 185 CSTTNSDVDYTPLVSLFGVYFQIRDDLMNLQSPEYTSNKGFAEDLTEGKFSFPVVHGIH- 243
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPD 303
R + + + +R ++ T + + + L
Sbjct: 244 -ADRSNRQVLNVLQKRPPTPTLKIHTINYLRDRTKSFDYTLSVLKKLEAQLRQEIAKLGG 302
Query: 304 SSWKKSLMEVVD 315
+ + +++++
Sbjct: 303 NEKFERIIDLLH 314
>gi|59709781|gb|AAW88518.1| geranylgeranyl diphosphate synthase [Epichloe typhina]
Length = 464
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 94/277 (33%), Gaps = 5/277 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ Y+ GK R L + L+ D ++ A+ +H ++L
Sbjct: 167 RSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGMLHESSL 226
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +++ A + + + + +
Sbjct: 227 LVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPPIIAIFADELVN 286
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L ED + + + +++
Sbjct: 287 LHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGL---FRLGIKLMQAESAAAVDCVPLVN 343
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD ++ K + ED GK + P+I + + + +
Sbjct: 344 LIGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPIIHSIR--ANPGNMQLINILKQ 401
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
V+ + A M + T +A+
Sbjct: 402 KTSDVQVKRYAVAYMESMGSFEYTRSVISILIARARK 438
>gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 368
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 82/324 (25%), Positives = 136/324 (41%), Gaps = 17/324 (5%)
Query: 13 EKVNFLILKRICSDVEMIPD-VVKYLI-----------FSGGKRLRPMLTLATALMLEYR 60
++V + + + + + Y GGK LRP L L + +
Sbjct: 44 DQVEPALRAAVG-KLPLATQRITNYHFGWEDEDGTPTRADGGKALRPALALLASQAVGGT 102
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A A+E +H +LLHDDV+D RR + A V+G ++L GD LLS AF +
Sbjct: 103 TAAAVPAAVAVELVHNFSLLHDDVMDCDTTRRHRATAWTVFGLGPAILAGDALLSLAFDV 162
Query: 121 ---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
E + + + L L EG+L DVT + L + + KT L +
Sbjct: 163 LVSSGEPAADDGAKVLGQAVQELVEGQLADAHFEIRNDVTLSECLRMAQLKTGALLGCST 222
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ ++ G ++ L+ +G +LG+A+Q VDD+L G+ GK + D R K +LP
Sbjct: 223 ALGAMFGGGRSEQVDHLRLFGEDLGLAYQYVDDLLGIWGDPRVTGKPVHSDLRRRKKSLP 282
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
VI A GT + ++ L +A ++ E A ++ +A + A
Sbjct: 283 VIAALTSGTAAGQELAALYQGSRDLTDAELVRAAGLIDEAGAKAQSQAQADALLTAALGE 342
Query: 298 LRCLPDSS-WKKSLMEVVDFCLQR 320
LR + L + + +R
Sbjct: 343 LRSASGAVGAADDLERLARWATRR 366
>gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2]
gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2]
Length = 309
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 15/239 (6%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----------LEYRGDN 63
++ + + + + D + + + GGKRLRP+L + A + + R +
Sbjct: 26 RLKQRLGNMLGESPQRLKDAIGHAVIDGGKRLRPILVVLGASLDSTPGSLPDPNDPRLEQ 85
Query: 64 HVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
A AIE IH +L+HDD+ LRRGK V+ T++L GD L S AF ++
Sbjct: 86 LWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRVFDEATAILAGDALQSLAFSLL 145
Query: 122 IETKSQEALEALSLVACTLAEGELR---QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + L+ V+ Q +
Sbjct: 146 ADAPQTDVKTRLNWVSLLSTGANRMVFGQQLDLNPPAQIPALAELTRMHELKTGALLYAA 205
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ R AL+++ LG+AFQ+ DD+LD G ++GK G+D + K +
Sbjct: 206 LMMGANQSSAEDRAALEAFIRPLGLAFQIQDDILDATGTAEQLGKTPGKDAADHKYSYV 264
>gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC
3773]
Length = 299
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG 61
++ +D++++ + +++ Y + +GGKRLRP+LTLA + +
Sbjct: 14 KIDAQLAQDLKQI---------TTDAQFSEMMAYAVLNGGKRLRPLLTLAVISSFQQATT 64
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ LA A+E++H+ +L+HDD+ LRRG+ + +G ++LVGD LL+ AF
Sbjct: 65 PQALKLATAVEWVHSYSLVHDDLPAMDNDLLRRGQPSVHAKFGEAAAILVGDALLTGAFE 124
>gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis
AJ13355]
Length = 302
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLE--YRGDNHVLL 67
+ ++ + + + + E + ++ + GKR+RPML L TA L D + L
Sbjct: 20 LADIDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDL 79
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD+ LRRG+ +G ++L LLS+AF
Sbjct: 80 ACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAF 132
>gi|195374722|ref|XP_002046152.1| GJ12673 [Drosophila virilis]
gi|194153310|gb|EDW68494.1| GJ12673 [Drosophila virilis]
Length = 446
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/363 (14%), Positives = 113/363 (31%), Gaps = 57/363 (15%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S ++ K+L+++G G ++ L +
Sbjct: 84 SLRWLLSDEIANVALHLRKLVGSAHPLMKTA-KHLLYNGKNTMQAWG-----LIVLLVSK 137
Query: 56 MLEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
+ + LA E I + L+H+ VV+ + +
Sbjct: 138 AAGHAPSIPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSGTQAGQDVSTYD 197
Query: 102 GNQTS----VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
+L GD+LL + + ++QE +E +S +E E +N +
Sbjct: 198 DMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLP 257
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-----------LGIAFQ 206
+ S + + +V + + Q + N + +
Sbjct: 258 YKPGTFQRPSLSVAVDFNEHDVMTPMPIGQVLGNPEQEWECRNILNAGSLLGKSCQASLK 317
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKP-------------TLPVILAFQRGTKREKNFW 253
L + GK++ ++ T ++ A
Sbjct: 318 LAGQSEQMQRHAYRFGKHLALAWQACLDAEIFQCPTLPLDTTFSLVSAPVLFHLEHDPSL 377
Query: 254 KSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ I GK SVE + + + AL T+ + A L+ P + +++L
Sbjct: 378 YALIEPGKKSVELIDYVQIHKAVIAGPALAKTKELQCKHTAAALSVLQHFPATDARQALE 437
Query: 312 EVV 314
++
Sbjct: 438 NII 440
>gi|317506406|ref|ZP_07964211.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
BAA-974]
gi|316255286|gb|EFV14551.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
BAA-974]
Length = 130
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G +LGIAFQ VDDVL GE + GK G D R K +LP+ GT + +
Sbjct: 4 FGRHLGIAFQYVDDVLGIWGESAQTGKPRGSDVRARKLSLPIAYVLGLGTPAAETVSAAY 63
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLMEVV 314
+ +S + + E A A + A D L L + L +
Sbjct: 64 ASGELLSDRECGEVIAAVEEAGARSWAMAGAERHIAAALDCLDNLTSQPGPAAE-LQALA 122
Query: 315 DFCLQRLN 322
L+R +
Sbjct: 123 HLLLRRNH 130
>gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 285
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALM 56
M+ L++L +EK N + + S + D +KY +FSGGKR+RP+L+L T
Sbjct: 1 MRDLDNL----LEKFNNYLSSLLEYDNSPQHKVIDSMKYSLFSGGKRIRPLLSLITFCEF 56
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH 81
E D + A AIE IHT +L+H
Sbjct: 57 SEDSLDKILPFAAAIEMIHTYSLIH 81
>gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 86
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ ++ + R SD E + + +Y + GK LRP+L + +A + + + A +
Sbjct: 15 LARLLRDLESRWPSDGERVHRISRYALLPAGKLLRPLLLVESARAVGGGYEESLPAALGV 74
Query: 72 EFIHTATLLHDD 83
E++H +L+HDD
Sbjct: 75 EYLHAGSLVHDD 86
>gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 153
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 16 NFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + I + + ++Y GGKRLRP L AT M A A+E
Sbjct: 15 NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74
Query: 73 FIHTATLLH 81
IH +L+H
Sbjct: 75 CIHAYSLIH 83
>gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase
gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase
gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Fspp And Ipp
gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Fspp And Ipp
gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp (P21)
gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp (P21)
gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Product Ggpp (P21)
gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Product Ggpp (P21)
gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp
gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp
gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Pyrophosphate And Fpp
gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Pyrophosphate And Fpp
gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-91
gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-91
gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-261
gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-261
gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-629
gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-629
gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-364
gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-364
gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-675
gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-675
gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-210
gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-210
gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ggpp (Inhibitory Site)
gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ggpp (Inhibitory Site)
gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-749
gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-749
gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252 (P21)
gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252 (P21)
gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252
gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252
gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-Sc01
gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-Sc01
gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-28
gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-28
gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-23
gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-23
gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-806
gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-806
gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-742
gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-742
gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-715
gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-715
gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp And Bph-715
gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp And Bph-715
Length = 340
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 107/298 (35%), Gaps = 19/298 (6%)
Query: 14 KVNFLILKRICSDV-------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
K+ I + I +D +I +++ GK R L + ++ D +
Sbjct: 5 KMEAKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 64
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
++ +E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + +
Sbjct: 65 VSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTT 124
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEV 179
+E L + L + + ++ +
Sbjct: 125 KEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLR 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+ +L + LGI +Q+ DD L+ + K ED GK + P++
Sbjct: 185 LMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIV 244
Query: 240 LAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQ 292
A + + + I + K I+ + +L T+
Sbjct: 245 HALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVN 302
>gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408]
Length = 291
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 21/272 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ D + +KT L + + LI Q SV
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-------LAFQ 243
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P F
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGSKNFFN 256
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ + + S ++K +R
Sbjct: 257 QTLNEAVDILTDLEEKTEFSGGEIQKIIESLR 288
>gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
Length = 385
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/329 (22%), Positives = 117/329 (35%), Gaps = 37/329 (11%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ V++LI GG+R RP L T +L + L A+E HT +L+ DDV D SA
Sbjct: 54 LVAPVRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAALELAHTGSLVVDDVEDGSA 113
Query: 90 LRRGKVAARLVWGNQ---TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+RRG+ A +G + F +A + + S A E +L L +
Sbjct: 114 VRRGRPTAHAAFGTAVALNAGTAAYFAFDRAIDLTLPDDSDLAGELRALFLAALRAAHMG 173
Query: 147 QLSLSKNLDVTEEDYLH-------------VIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
Q + E L + K+ L +A +++L+ ++ A
Sbjct: 174 QALDLQGHHPELEHALTSGESAPVLHSVRLTHRLKSGTLVAAGFTMAALVTCAPPALVGA 233
Query: 194 LKSYGMNLGIAFQLVDDVLDYR--GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L +GM LG A+Q+ DD D K + ED R K TLP+ A R
Sbjct: 234 LTDFGMALGTAYQITDDTADLEGVTHDGRPTKTVAEDLRGAKVTLPLAHATARVPADRLM 293
Query: 252 FWKSTINDGKISVE-----------------NLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ DG + + +++ + A E A A
Sbjct: 294 ALWGRVRDGARADDGRAAGNGGDGRAATDGRAVEELRRALLSCGAAAVCEEEARLLVDGA 353
Query: 295 KDSLRCLPD--SSWKKSLMEVVDFCLQRL 321
LR L L E+ + R
Sbjct: 354 WHRLRPLLPHRHPATARLGELARRTVLRS 382
>gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
Length = 366
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/305 (21%), Positives = 106/305 (34%), Gaps = 28/305 (9%)
Query: 12 MEKVNFLILKRICSDVEMIPDV------------VKYLIFSGGKRLRPMLTLATALM--- 56
++ V I + E+ + + KRLRP+L +A +
Sbjct: 27 LQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGYHLTRG 86
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGD 111
A +E +HT L+HDDV D + LRRG A G +V+VGD
Sbjct: 87 GAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAALHHLLAPGRAGEDLAVVVGD 146
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVI 165
L ++A ++ + + A +A Q D
Sbjct: 147 HLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQALRVAH 206
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
F A L +++A ++ Q L+ G G+A+QL DDVL G+ GK
Sbjct: 207 LKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGDARMSGKAG 266
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDT 283
DF GK T PV+ A+ R + + + + L A ++ +
Sbjct: 267 DSDFSQGKRTFPVLAAYARASTEGRAELERLWALPAQEKDEAALGHARELVERWGGRLAC 326
Query: 284 EYRAY 288
E
Sbjct: 327 ERMVE 331
>gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
Length = 590
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/334 (20%), Positives = 118/334 (35%), Gaps = 19/334 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-- 58
+ L D +N + + + + + GKR RP LT+A L
Sbjct: 233 LSQLRDDIDFWFTPLN--LDSIMGPAEGETEKISRQWLGRAGKRWRPFLTVAAYQALRTT 290
Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD---- 111
D+ +A A+E H A+L+HDD+ D+ A R G+ G ++ VGD
Sbjct: 291 PGAPIPDDLRKVAVAVECFHKASLIHDDIEDNDAQRYGEPTLHEEHGIAVALNVGDLLIG 350
Query: 112 --FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+ L A E K A + + +T + L + + KT
Sbjct: 351 EGYRLLAACNASPEQKVAMLRIAAEGQRELCRGQGAELVWARQPQPLTSTEVLDIFRKKT 410
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A F AL++ ++ AG + L++Y LGIA+Q+ DD+ D
Sbjct: 411 APAFGVALQLGTVYAGQLEEHEEVLQAYSEALGIAYQIRDDLSDLGASGETNDIAGLRPS 470
Query: 230 ------RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
KR + + ++S + + E RA
Sbjct: 471 LLLAVAFERANLEASGADKSLAEKRAEQKLALEAHWRRLSTATPAEIEALYFELRADERC 530
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
SY ++A SLR + +++ K L V+
Sbjct: 531 RTLLESYKEEAIRSLRDVENANLKGLLRRVIGKI 564
>gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
Length = 795
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 15/288 (5%)
Query: 2 KMLEDLTLKDMEKVNFLIL----KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-LM 56
+ D+ ++VN + +++ + I + Y + GKRLRP++
Sbjct: 503 EEFSDIIETVRKQVNESLDIPKDEKVSLMEDFISNAANYSLRGDGKRLRPIMAWVMGVKE 562
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
+ + L ++E++HTA+L+ DD+ D++ +RRG+ V+ + L G FL
Sbjct: 563 YGLKESEMLPLLRSLEYMHTASLIFDDLPAQDNADIRRGRPTVHKVYNVAIAELTGLFLT 622
Query: 115 SQAFCMVIETKSQEALE-----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+A + + S +K +T E + KT
Sbjct: 623 QKAIEEQTFLQQFDLRNVLKLIRYSTETTADLCKGQTMDLEAKGKQLTLEQLNMMCFYKT 682
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
F AAL + +++A +ALK + + GIAFQ+ DD+LD GEV GKNIG+D
Sbjct: 683 GKGFEAALMMPAILAARDQVEMEALKKFSYHAGIAFQIKDDLLDVEGEVRLTGKNIGKDA 742
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTIN---DGKISVENLKKAFIIM 274
N T IL + K + + + K+S LK +
Sbjct: 743 ENNSSTFVSILGLEEAKKEMWQHYCFAMEILQEMKLSTTFLKHLLNYI 790
>gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47]
Length = 616
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 28/315 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATAL-MLEYRG-------------DNHVLLACAIEFIHTAT 78
+ + GGK RP +TLA M+ G D A +IE H A+
Sbjct: 277 IALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKAS 336
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
L+HDD+ D A R G+ A +G T++ VGD+L+ + ++ + ++A + V
Sbjct: 337 LVHDDIEDGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAETRVDL 396
Query: 139 TLAEGELRQ-----------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ +K+ +T D L + KT+ F AAL +AG
Sbjct: 397 LDSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDA 456
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+++ ++ + NLG+AFQ+++D+ D+ G+ + G D G+PTL LA Q
Sbjct: 457 SALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK-LTAGADVIGGRPTLLWALALQHLED 515
Query: 248 REKNFWKSTINDGKI--SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+K + E L + + + + +A+ + + S
Sbjct: 516 EDKKTLLALAEPDCELSDRERLTTVRRLYDKANVFEMSLQLIDKHQARAEQVADEIENES 575
Query: 306 WKKSLMEVVDFCLQR 320
++ L +VD L+R
Sbjct: 576 LRRLLYFLVDTVLER 590
>gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 377
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 72/351 (20%), Positives = 126/351 (35%), Gaps = 48/351 (13%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNH 64
D+ V+ R+ +DVE++ + + GGKRLRP L D
Sbjct: 33 ADVAAVDP----RLVADVELLVE----FVTDGGKRLRPQFLWCGWLAGGGAATGPDADAV 84
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTSVL 108
+ +A A+E + LLHDD++D S RRG+ + G ++L
Sbjct: 85 LQVAAALELLQACALLHDDIIDRSQRRRGRPSTHRAVAKRAADAGVAADPEHHGVSVAIL 144
Query: 109 VGDFLLSQAFCMV----------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+GD L+ + ++A L + + + +
Sbjct: 145 LGDLALAWCDDLFLAGALPLGAAHRAAPVWRAMRTEVLAGQLLDLAVTVSAEADPATQER 204
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ A L + + +AG + AL++YG ++G+AFQL DD+L G+
Sbjct: 205 DAMRVNRYKTAAYTIERPLHLGAALAGAAPATIAALRTYGTDIGVAFQLRDDLLGVFGDP 264
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--KISVENLKKAFIIMRE 276
GK G+D GK T+ + LA + + D + + +K I+
Sbjct: 265 AVTGKPAGDDLVEGKQTVLLALARAELGRAPDRVGELADLDAGVGRADADTEKLTAIIAG 324
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCL-PDS------SWKKSLMEVVDFCLQR 320
A+ E R +L + PD + L ++ R
Sbjct: 325 TGAVGAVERRIAELVGTGLAALSSIGPDGRSAVPDPVHERLADMAVAATAR 375
>gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
Length = 267
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 17 FLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
L++K++ S + +++ ++Y +F+ GK +RP L A+A + D + ++ A+
Sbjct: 6 SLLVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAV 65
Query: 72 EFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
E IH +L+HDD+ D+ +RRG+ ++ + ++L GD LL+ AF ++
Sbjct: 66 EIIHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDESPF 125
Query: 130 LEALSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + A Q+ ++ + D + KTA FS A E+ ++
Sbjct: 126 IRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
N AL +YG+NLG AFQ+ DD+ D +
Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQD 217
>gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3]
Length = 301
Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 106/295 (35%), Gaps = 15/295 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ LI + +I +++ GK R L + ++ D +++
Sbjct: 3 AKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQ 62
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + ++E
Sbjct: 63 IVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEP 122
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L + L + + ++ +
Sbjct: 123 LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLME 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +L + LGI +Q+ DD L+ + K ED GK + P++ A
Sbjct: 183 ALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHAL 242
Query: 243 QRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQ 292
+ + + I + K I+ + +L T+
Sbjct: 243 NFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVN 297
>gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103]
gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103]
Length = 311
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLE--YRGDNHVLL 67
+ ++ + + + + E + ++ + GKR+RPML L TA L D + L
Sbjct: 29 LADIDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDL 88
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD+ LRRG+ +G ++L LLS+AF
Sbjct: 89 ACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAF 141
>gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a]
Length = 335
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 106/295 (35%), Gaps = 15/295 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ LI + +I +++ GK R L + ++ D +++
Sbjct: 3 AKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQ 62
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + ++E
Sbjct: 63 IVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEP 122
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L + L + + ++ +
Sbjct: 123 LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLME 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +L + LGI +Q+ DD L+ + K ED GK + P++ A
Sbjct: 183 ALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKVSFPIVHAL 242
Query: 243 QRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQ 292
+ + + I + K I+ + +L T+
Sbjct: 243 NFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVN 297
>gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
bacterium EB0_41B09]
Length = 322
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/285 (17%), Positives = 105/285 (36%), Gaps = 12/285 (4%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++KV K + + + + + S GK LR L LAT +L ++ A
Sbjct: 18 LDKVKIDFAKSFEVNDQFLSAWLSHHGESQGKWLRARLALATGGLLGISSQTYINWAVVC 77
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH+A+LLHDD+ D LRRG+ + +G +V GD+L++++F + E
Sbjct: 78 ELIHSASLLHDDICDQDNLRRGQTSLWKEFGIPAAVCTGDYLIAESFRKITEIDQGWHQT 137
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + + + S ++ E + K + +L +
Sbjct: 138 ILLKLLSYSVKEIIFGQSKDISISPYEMTWDQYTKMA----TNKTAPFIALPMMGMFNCN 193
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ K+ L + ++ + ++ + + F + P + +++
Sbjct: 194 ECSKAECEGLQESSDILGLSYQWLNDLENLIGVDQDKFTDIYNNHPNGMLINILQDIDES 253
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
I D +E+L + A + + + AK+
Sbjct: 254 EKIEIIKDPSTLIEHLNEI--------AFKNQKNMIKNLLNDAKN 290
>gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
Length = 296
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 70/323 (21%), Positives = 128/323 (39%), Gaps = 47/323 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M++L + KV ++ ++ Y+ GK +RP L L A L
Sbjct: 10 MELLPMEVRSAINKVIQVLEGSFTGLWMPDNLLNATYHYIRNR-GKLIRPTLVLLMAYAL 68
Query: 58 EYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ +L A ++E IHTA+LL DD++D +RRG ++G T++L D +++
Sbjct: 69 GNGSGLERAILPAASVELIHTASLLQDDIMDQQRIRRGVKTPYSIYGPHTAMLASDLIIA 128
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A I + + + L + LA G+ + LS +VT +DYL +I KTA L +
Sbjct: 129 KAVEYAIRSGDNDIVFELLNSSIKLAIGQSFESELSSRANVTIDDYLRLIYYKTASLIES 188
Query: 176 ALEV-SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ V + + + V ++ G +GIAFQ+ DDV+D
Sbjct: 189 SMVVGAYSVNVKDDEVISKIRDVGRFVGIAFQVRDDVID--------------------- 227
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
I + G ++ ++ G V A+ A
Sbjct: 228 -YLNIDSGNPGANTDEINIVRIMSKGNGDVR------------GAIDKARGLLNEMLDNA 274
Query: 295 KDSLRCLPDSSWKKSLMEVVDFC 317
+R + ++ +V++
Sbjct: 275 VKVIREVVNNEV------LVNYI 291
>gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13]
Length = 335
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 106/295 (35%), Gaps = 15/295 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ LI + +I +++ GK R L + ++ D +++
Sbjct: 3 AKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQ 62
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + ++E
Sbjct: 63 IVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEP 122
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L + L + + ++ +
Sbjct: 123 LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLME 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +L + LGI +Q+ DD L+ + K ED GK + P++ A
Sbjct: 183 ALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMXSEKGFAEDITEGKLSFPIVHAL 242
Query: 243 QRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQ 292
+ + + I + K I+ + +L T+
Sbjct: 243 NFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVN 297
>gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 794
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 56/334 (16%)
Query: 5 EDLTLKDMEKVNFLILKRIC----SDVEM----IPDVVKYLIFSGGKRLRPMLTLATA-L 55
++ V I ++ SD + D Y + GKRLRP+LT
Sbjct: 501 KECFSNTFATVRDEINSQLQIKQPSDTPPMQVSLIDTANYTLEGDGKRLRPILTWVMGVN 560
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
V L ++E++HTA+L+ DD+ RRG+ V + T+ + G +L
Sbjct: 561 EYGLEPSAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHNSATAEITGLYL 620
Query: 114 LSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ +A + S +L S SK +T E + K
Sbjct: 621 IQKAIEEQSSLVGFDASSVVSLIQYSSKRAGEMCMGQAMDLDSKGKKLTLEQLNMICFYK 680
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + F A+L + +++A V + LK + + GIAFQ+ DD+LD +G++ +GK G+D
Sbjct: 681 TGIAFEASLVMPAILAQVNEAEIALLKKFAYHAGIAFQIKDDLLDVQGDLERLGKPTGQD 740
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
N I+ + A ++
Sbjct: 741 AENNTSNF----------------------------------VTILGQEGA---SQEMWE 763
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Y Q A ++L+ +P ++ L ++++ + R +
Sbjct: 764 HYCQ-AVEALQEMPRNTA--FLKHLLNYMVNRDS 794
>gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
SW2]
gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
SW2]
Length = 419
Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+V IL+ I + + +++ + GK LRP L +AT + L R ++ V A A
Sbjct: 220 ARVVDEILRLIPNKQPQRDLYSLMRDYVQREGKGLRPTLVIATCMALGGRFEDGVRAAAA 279
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+E H L+HDD+ D+S RRG + G +V GD + A M
Sbjct: 280 LEMFHNGFLVHDDIADESTHRRGLPTLHMSHGIGLAVNAGDGMHLFAVDM 329
>gi|226468294|emb|CAX69824.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
Length = 176
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ +G +LG+AFQL+DDVLD+ + ++GK G D + G T PV+ A QR +
Sbjct: 47 QRHIDDMYDFGKHLGMAFQLIDDVLDFVTDEAKLGKPSGADLQMGIATGPVLFAAQRYPE 106
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ DG + ++A +++++ + T A + Q A+ L DS +
Sbjct: 107 LNTILLRQFSLDG-----DTERALELVQQSDGVGQTRMLAEFHFQAAQRCLFQFRDSLSR 161
Query: 308 KSLMEVVDFCLQR 320
K+L+ V LQR
Sbjct: 162 KALLHVAANFLQR 174
>gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus]
gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|227044|prf||1613414G crtE gene
Length = 289
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/303 (19%), Positives = 114/303 (37%), Gaps = 27/303 (8%)
Query: 13 EKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++ ++K + + ++ + Y +F GG R+RP + ++ AL
Sbjct: 5 KRIESALVKALSPEALGESPPLLAAALPYGVFPGGARIRPTILVSVALACGDDCPAVTDA 64
Query: 68 ACAI-EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A E +H A+L+HDD+ D++ +RRGK + + +VL GD LL + F ++ +
Sbjct: 65 AAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEVLADV 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ AL L++ R + +E + A + + + + A
Sbjct: 125 GAVNPDRALKLISKLGQLSGARGGICAGQAWESESKVDLAAYHQ-AKTGALFIAATQMGA 183
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ GM +G AFQ+ DD+ D MGK G+D N +P + +
Sbjct: 184 IAAGYEAEPWFDLGMRIGSAFQIADDLKDALMSAEAMGKPAGQDIANERPNAVKTMGIEG 243
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K + + L A + Y K + +P S
Sbjct: 244 ARKHLQ--------------DVLAGAIASIPSCPGEAKLAQMVQLYAHK----IMDIPAS 285
Query: 305 SWK 307
+ +
Sbjct: 286 AER 288
>gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
Length = 319
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 66/330 (20%), Positives = 129/330 (39%), Gaps = 62/330 (18%)
Query: 12 MEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------- 61
++++ I + + + + Y + +GGKR+RP+L AT ++
Sbjct: 29 IDQLESDITAYLQACKLPSPLHEASLYAMTNGGKRVRPLLVAATFATVKTDNSLANPSHQ 88
Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
++ A+E +H +L+HDD+ LRRG+ + +G ++L GD L + A
Sbjct: 89 LSNDVRRAMMAVECLHGYSLVHDDLPCMDDDALRRGRPTTHIAYGEAAAMLAGDVLQTLA 148
Query: 118 FCMVIETKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F + T E E ++ +++ + + + KT
Sbjct: 149 FEALTHTYFGENSEFATPLSATFAPRARRMVMGQMLDLNGEHQQLSQTELEAIHRDKTGA 208
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A++ + ++ A +S RQAL S+ +G+AFQ+ DD+LD + ++GK G D +
Sbjct: 209 LIEASVLMGAICANATDSERQALSSFAQQIGLAFQVQDDILDVTADTEQLGKPAGSDEKL 268
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T +L + + A S
Sbjct: 269 DKSTYVKLL--------------------------------------GVEAAKTYAQSLF 290
Query: 292 QKAKDS-LRCLPDSSWKKSLMEVVDFCLQR 320
AK++ + D ++ L+++ D+ R
Sbjct: 291 DTAKNAVITEFGDDNY---LVDLADWLWAR 317
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/322 (17%), Positives = 110/322 (34%), Gaps = 57/322 (17%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+++ + K + I ++Y + + KR PM+ +A + + ACA
Sbjct: 89 KEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQQALPTACA 148
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E +HTA+L+HDD +DD +RRG+ + V+G +VL GD L F ++ + S
Sbjct: 149 LEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVSSTSDV 208
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---------IKSKTAVLFSAALEV 179
+ + V +A+ Q + + + K ++ +
Sbjct: 209 PPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERKFGIMAECSAVT 268
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+I G + + L++YG ++G+ +Q+ DD+L+ + G +
Sbjct: 269 GGIIGGATDEEVERLRNYGRSVGVLYQIADDILEEEALLEGNGVIRKNKTSYPRAY---- 324
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L A + AK L
Sbjct: 325 ---------------------------------------GLEKAREIAETLRSNAKMELS 345
Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321
L VD+ + R
Sbjct: 346 GFDRGKS-APLYSFVDYAIDRS 366
>gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides]
Length = 256
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 49/297 (16%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91
++Y + GGKRLR L L +A + + V A +IE +H +L+H +DD LR
Sbjct: 1 MRYAVQ-GGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLR 59
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
RG W T+VL GD L + AF ++ + A + LVA + L
Sbjct: 60 RGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAAVRIELVASLAKASGAEGMVLG 119
Query: 152 KNLDV------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ LD+ + + + + A + + R L+ Y LG+AF
Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILGQADRVPLRRYATALGLAF 179
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD+LD G+ + GK + +D GK T +L
Sbjct: 180 QIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLL------------------------- 214
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + RA + + A+ +L P +L+E F + R +
Sbjct: 215 -------------GLDGAKARARALVEDAEAALA--PYGPEAGTLIEAARFVISRES 256
>gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methylophilales bacterium HTCC2181]
gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methylophilales bacterium HTCC2181]
Length = 322
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 6/268 (2%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ V + + + + +K+ S GK +R L LAT +L + ++ A
Sbjct: 21 LDIVKREFSESLNVEGRHLSQWLKHHGESEGKWIRAKLALATGSLLGLSSETYIKWAVVC 80
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
E IH+A+LLHDDV D RRG++ +G ++ GD+L++++F + E
Sbjct: 81 ELIHSASLLHDDVCDKDLYRRGRLTVWKEFGIPAAICTGDYLIAESFKKITEISQGWHQT 140
Query: 132 ALSLVACTLAEGELRQLSLS---KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
L + + + + S+ ++ + +Y + KT L +
Sbjct: 141 ILLKLLSSSVKDIVFGQSVDVSVDSVLLDWANYQKIAIKKTGPLIMLPIMGMFKCKEFDG 200
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
ALK NLG+A+Q V+D+ ++ + + + + + Q K
Sbjct: 201 DECIALKEISENLGLAYQWVNDIENFV---GHGQEPLSDLIYGHPNAIIIKFLEQYSLKD 257
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRE 276
+ F + +S + K ++
Sbjct: 258 REKFRDIKVLRKALSNHDFKNTIDEIKN 285
>gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c]
gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName: Full=BET2 suppressor
protein 1; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces
cerevisiae]
gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae]
gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae]
gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae
YJM789]
gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291]
gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118]
gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c]
gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB]
gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 335
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 106/295 (35%), Gaps = 15/295 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ LI + +I +++ GK R L + ++ D +++
Sbjct: 3 AKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQ 62
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + ++E
Sbjct: 63 IVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEP 122
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L + L + + ++ +
Sbjct: 123 LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLME 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +L + LGI +Q+ DD L+ + K ED GK + P++ A
Sbjct: 183 ALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHAL 242
Query: 243 QRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQ 292
+ + + I + K I+ + +L T+
Sbjct: 243 NFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVN 297
>gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 222
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
KT + A + ++ QA++ +G +G+A+Q++DDVL +G + K
Sbjct: 65 HTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVLGVKGFEGNL-KE 123
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
GED R+GK T PV A + ++ S +N+ E +++A ++ + +
Sbjct: 124 AGEDIRDGKITYPVAKAMGKLELPQRERIWSILNERTSDREKIEEALSLINSANVIDECV 183
Query: 285 YRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A ++ + L PD+ K L + + ++R
Sbjct: 184 ADARQLVEEEWKVVDPLIPDTVSKVMLRALCFYIIRR 220
>gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
Length = 235
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
+ +E+V +IL + + +V+Y + + GK LR L L A M E + +
Sbjct: 12 IERGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123
A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ + + +
Sbjct: 71 YFAAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGL 130
Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + T+ GEL QL + ++T + YL I+ KTA LF A ++
Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
S + G G LG+AFQL DD++DY+ +V E GK
Sbjct: 191 GSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGKR 235
>gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 279
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 67/329 (20%), Positives = 134/329 (40%), Gaps = 66/329 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
K + + D + ++ + ++ D + + + Y S GKR+RP++ L T ML
Sbjct: 7 KEFDRILNTDKKIIDQAMKEKFVGDNP-LNEALVYASDS-GKRIRPIVFLETCRMLLGDK 64
Query: 61 -GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N + A ++E +H +L+HDD +D+ RRGK +G ++LVGD LLS A
Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124
Query: 118 FCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
F + + + + L+ + + + N + L V K+KT+ L
Sbjct: 125 FENILNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTSRL 184
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F AAL ++ L + + + L++Y LG+AFQL DD+LD
Sbjct: 185 FMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILDKY----------------- 227
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ + + ++ + + + +
Sbjct: 228 -----------------------------------DEIELNILSCLSMDEAKKLLLDFNE 252
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
KAK++++ ++ + + ++D+ +R+
Sbjct: 253 KAKENIKDFDNNDFH---IYLIDYLTERI 278
>gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115]
Length = 329
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVV 85
++++ GGK +R L LA+A D LA +E L+HDD+
Sbjct: 26 SEMLRDYPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQ 85
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DDS RRG+ A ++G ++ VGD L + + V A+E + AEG+
Sbjct: 86 DDSEERRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEGQH 145
Query: 146 RQLSLSKNLDVTEEDYLH-VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
LS ++ + + + + ++ + + A + G+ LG A
Sbjct: 146 LDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPASAFTNAGLALGSA 205
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK--I 262
FQ+ DDVL+ G+ + GK IG D GK TL V+ + ++ + + +
Sbjct: 206 FQIRDDVLNLLGDPLKYGKEIGGDLLEGKRTLIVLRWLAQAPAEQREVFLDQMRRDRAAK 265
Query: 263 SVENLKKAFIIMRENRAL 280
+ + + ++ +
Sbjct: 266 DPAVIAQIHRWLLDSGCV 283
>gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
Length = 299
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 6/211 (2%)
Query: 10 KDMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
K++ V LI+ + + + + + I + GK +RP+LTL T L +
Sbjct: 9 KEINDVLSLIINELGNLLNGVNMPPNLRESAMHYIHNKGKMIRPLLTLITTHTLGGNLMD 68
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
V A A+E +H ATLL DD++D +RRG +G + ++L D L+++A ++
Sbjct: 69 AVNPAIAVELVHVATLLQDDIIDGHLMRRGSETPFKRYGTEYTILASDLLIAKAIEYSLK 128
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+K++ L+ A LA G+ +L N V Y+ +I++KTA L SAA+ + +
Sbjct: 129 SKTRRITMELTSAALRLAIGQSYELEYKLNGKVDMNIYMRIIENKTASLISAAIVLGGYV 188
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
A ++ L+S G LG A+Q+ DD++DY
Sbjct: 189 ADADSNTINLLRSLGEKLGAAYQIRDDIIDY 219
>gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
Length = 345
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 87/259 (33%), Gaps = 2/259 (0%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I Y+ GK R L A + L+ D+ ++ I +H A+LL DD+ D+S
Sbjct: 55 IRGPYDYITSKPGKEFRTQLLSAFNVWLKVSPDSLQCISGVIRMLHNASLLVDDIQDNSR 114
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG+ A V+G ++ +F+ A + + + EA+ + + Q
Sbjct: 115 LRRGRPVAHSVFGVAQTINSANFVYFLALAELQKLP--HSKEAMEIFTAEMLSLHRGQGM 172
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
D + ++ + + + LG+ FQ+ D
Sbjct: 173 DLFWRDTLSCPSEDDYLEMVSNKTGGLFRLAIKLMQAECETKVDCMPLVNLLGLIFQITD 232
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D + K ED GK + PV+ + + G+ E +
Sbjct: 233 DYRNLASLDYTRKKGFCEDLTEGKFSFPVVHSIHAQPGNGELLHILAQKPGEFEYEIKQH 292
Query: 270 AFIIMRENRALVDTEYRAY 288
A M + T
Sbjct: 293 AVGYMENTGSFAYTRRAVE 311
>gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 162
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+ + ++Y GGKRLRP L AT M A A+E IH +L+H
Sbjct: 3 NTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIH 57
>gi|296198927|ref|XP_002747056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2
[Callithrix jacchus]
Length = 298
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ K ++ + + +G KA ++L P S + +L +V F + R +
Sbjct: 243 DYGKLRERIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRFS 298
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 27/138 (19%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ + + LR ++ L +
Sbjct: 68 SLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSQNSLQ-----LRGLVVLLISKA 122
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ + L+ +
Sbjct: 123 AGPSSGNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNINELQSSDGPLKDMQ 182
Query: 101 WGNQTSVLVGDFLLSQAF 118
+GN+ ++L GDFLL+ A
Sbjct: 183 FGNKIAILSGDFLLANAC 200
>gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli]
Length = 371
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 102/278 (36%), Gaps = 5/278 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ + YL+ GK +R L + + L+ + ++ I +HTA+LL DD+ D
Sbjct: 73 NKIVRGPLDYLLAIPGKDIRSKLIDSFNIWLQLPEEKLSIVKDIINLLHTASLLIDDIQD 132
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
S LRRGK A V+G ++ ++ + K A + +L + L
Sbjct: 133 ASRLRRGKPVAHDVYGVAQTINSANYAY---YLQQARLKEIGDPRAFEIFTRSLLDLHLG 189
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
Q D+ ++ + +Q+ LG+ FQ
Sbjct: 190 QGMDLYWRDMVVCPTEEEYTRMVMYKTGGLFNLALDLMRIQSRKNTDFSKLVELLGVIFQ 249
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD ++ + + K + ED GK + P+I + + + + +
Sbjct: 250 IRDDYMNLQSGLYAEKKGLMEDLTEGKFSYPIIHSIRASPESSELLD--ILKQRTEDEAV 307
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
+A IM + T +A+ ++ L S
Sbjct: 308 KIRAVKIMESTGSFQYTRETLSRLSAEARGYVKKLETS 345
>gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans]
Length = 302
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 12 MEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLE--YRGDNHVLL 67
+ ++ + + + + E + ++ + GKR+RPML L TA L + + +
Sbjct: 20 LADIDRRLEQLLPVEGERDFVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHEGLLDI 79
Query: 68 ACAIEFIHTATLLHDDVVDDSA 89
ACA+E +H A+L+ DD+
Sbjct: 80 ACAVEMVHAASLILDDMPCMDD 101
>gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans]
gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans]
Length = 307
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 10 KDMEKVNFLILKRIC------SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-- 61
+++E + I + +++ ++ + + GKR+RP+L L A L Y+G
Sbjct: 13 REIEVMRQSIDDHLAGLLPETDSQDIVSLAMREGVMAPGKRIRPLLMLLAARDLRYQGSM 72
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E HTA+L+ DD +D++ LRRG+ +G ++L LLS+AF
Sbjct: 73 PTLLDLACAVELTHTASLMLDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLLSKAF 131
>gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34]
gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus
gallolyticus UCN34]
Length = 289
Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 10 KDMEKVNFLILKR-ICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ ++N I + SDV + + + Y + +GGK +RP++ L + H
Sbjct: 2 DKLNEINQAIRRYYAQSDVVSPELIEAILYSVEAGGKLIRPLIFLEILEGFGIELTEGHF 61
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 62 DVAAALEMIHTGSLIH 77
>gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115]
Length = 341
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEY-----RGDNHVLLACAIEFIHTATLLHDDVV 85
++++ GGK +R L LA+A D LA +E L+HDD+
Sbjct: 38 SEMLRDYPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQ 97
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DDS RRG+ A ++G ++ VGD L + + V A+E + AEG+
Sbjct: 98 DDSEERRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEGQH 157
Query: 146 RQLSLSKNLDVTEEDYLH-VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
LS ++ + + + + ++ + + A + G+ LG A
Sbjct: 158 LDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPASAFTNAGLALGSA 217
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK--I 262
FQ+ DDVL+ G+ + GK IG D GK TL V+ + ++ + + +
Sbjct: 218 FQIRDDVLNLLGDPLKYGKEIGGDLLEGKRTLIVLRWLAQAPAEQREVFLDQMRRDRAAK 277
Query: 263 SVENLKKAFIIMRENRAL 280
+ + + ++ +
Sbjct: 278 DPAVIAQIHRWLLDSGCV 295
>gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
Length = 298
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 76/309 (24%), Positives = 121/309 (39%), Gaps = 49/309 (15%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S E I ++Y + +GGKRLRP L T +L V A +E IH+ +L+HDD+
Sbjct: 28 SYPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDL 87
Query: 85 V--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ RRGK+ V+G ++L+GD LL+ AF M+ E +
Sbjct: 88 PALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSEKNLNILSFEQITNIISKTS 147
Query: 143 GELRQLSLSKNLDVTEEDYLHVIK---------SKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + E I KT L +E++ +IA V R
Sbjct: 148 AYSGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLV 207
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL
Sbjct: 208 LEEYAELIGLAFQVKDDILDIEGTFEDLGKPVGSDDDLHKATYPSIL------------- 254
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ +++ ++AK + + K L+ +
Sbjct: 255 -------------------------GMEESKKILNETVERAKKIIHNMFGEEKGKILISL 289
Query: 314 VDFCLQRLN 322
DF +R +
Sbjct: 290 ADFIRERKS 298
>gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
DelRiverFos13D03]
Length = 293
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 5/240 (2%)
Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACA 70
++ + + D + + Y + GG R+RP + L+ A+ A A
Sbjct: 9 AATARVLARAMGGDAPAQLAQALHYAVTPGGARIRPTILLSVAMACGDDRPALSDAGAVA 68
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
+E IH A+L+HDD DD+ RRGK + +VL GD L+ AF ++ E +
Sbjct: 69 LEMIHCASLVHDDLPCFDDADTRRGKATVHKAFSEPLAVLTGDSLIVLAFDILAEAAGDD 128
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188
A AL ++ + + +E + + A + + + + A
Sbjct: 129 AKRALQMIRVLSRRTGMPDGICAGQGWESEAEVNLSAYHR-AKTGALFIAATQMGALAAG 187
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ + G +G AFQ+ DD+ D + +GK G+D +G+P Q +
Sbjct: 188 QDCEPWEELGARIGEAFQVADDLRDALYDAEALGKPAGQDEAHGRPNAVSAYGVQGAIRH 247
>gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From
Rhodobacter Capsulatus Sb1003
gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From
Rhodobacter Capsulatus Sb1003
Length = 298
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M + + + + V + I + D + Y GGKRLR L + +A +
Sbjct: 1 MSLFSERLKEIQDAVETAMAAAIGRLPAGDLRDAMAYAAQ-GGKRLRAFLAIESAAIHGI 59
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A A+E +H +L+HDD +D+ LRRG W + T+VL GD L + A
Sbjct: 60 SMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLA 119
Query: 118 FCMV 121
F +
Sbjct: 120 FELC 123
>gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori]
gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori]
Length = 382
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 99/326 (30%), Gaps = 36/326 (11%)
Query: 25 SDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGD-------NHVLLACAIEFI 74
S+V I D + + GGK R + T+ + +E L +E
Sbjct: 65 SEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 124
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
++ DD++D S++RRG + D LL + +
Sbjct: 125 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 184
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--------- 185
+ E R VT ++ ++
Sbjct: 185 KMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRYYTIIKYKAAYYTYNLPVSLGLL 244
Query: 186 ----VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
V + ++ + + +G FQ+ DD +D G+ + GK + L V
Sbjct: 245 LAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQAL 304
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA-----KD 296
+ + F + VE +K+ + + + Y + +KA
Sbjct: 305 QRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLH--------LPQIYKHQEKAMYDNIIR 356
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ +P + + +++D R +
Sbjct: 357 QIENIPIEAARVLFKKLLDITYNRQH 382
>gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
Length = 331
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALM-----LEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ GGK +R L L +A + + LA A+E L+HDD+V
Sbjct: 28 YAMLRDYPQRGGKGIRSELLLLSAQAHGLAEGGAGWERALWLAAALELFQNWVLIHDDIV 87
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DDS RRG A + G ++ GD L + + V + + AEG+
Sbjct: 88 DDSDERRGAPALHKLHGVPLALNAGDALHAYMWAAVQKAGLDAGFSEFLTMIHRTAEGQH 147
Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
+S ++ + + ++ + ++ G++LG A
Sbjct: 148 LDVSWVEHGEWNLQPADYLEMVRLKTGFYTIVTPLRLGALAAGQPPHPDFEAAGLSLGTA 207
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG--KI 262
FQ+ DDVL+ G+ + GK IG D GK TL V+ Q + ++ + +
Sbjct: 208 FQIRDDVLNLTGDPAKYGKEIGGDLLEGKRTLVVLHWLQHARETRRHIFLDQMRRPRTDK 267
Query: 263 SVENLKKAFIIMRENRAL 280
++ +R + +L
Sbjct: 268 DPAIIEDLLEWLRGSDSL 285
>gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 89/271 (32%), Gaps = 6/271 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ E + KY+ GK++R L L L + ++ +E +H A+L+ DD
Sbjct: 932 SKEEEELIAPFKYICSIPGKQIRVKL--GFNLWLNVDNEIVNAISEIVEMLHNASLMIDD 989
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG ++G T++ +++ A ++ + +A+ + +L +
Sbjct: 990 IEDSSELRRGMPVTHRIYGLPTTLNTANYIYFVALSKTVQLR---HRDAVKVFTESLLDL 1046
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
Q D + + + ++ + ++
Sbjct: 1047 HRGQGMEIYWRDAVICPTEAKYLDMVIKKTGGLFRLGVNMLQLFSTNKTDYNQLLNDMAT 1106
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-STINDGKI 262
FQ+ DD ++ ++ + +N +
Sbjct: 1107 YFQIRDDYMNLVAGEVRENFSLKGFAEDLTEGKFSFPIIHALQSNPENDQILKILRQRTN 1166
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
SVE K I+ +L T+ R K
Sbjct: 1167 SVELKKHCINILSNLGSLNYTKQRLNELSNK 1197
>gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
Length = 289
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 10 KDMEKVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN 63
+ + K+N I + S +I ++ Y + SGGKR+RP+ L + ++
Sbjct: 2 EKLTKINQTISHFYQKSNLVSQD-LIDSII-YSVDSGGKRIRPLFLLESLEAFNITLTED 59
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
H +A A+E +HT +L+HDD+ +
Sbjct: 60 HFKVAAALEMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQ 98
>gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM
16294]
gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM
16294]
Length = 283
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
M+ +L + + ++ ++ +GGKR RP L L ++
Sbjct: 1 MQNFEQFLLDNLPTSKSIHPTYESALQNMLEAGGKRFRPALLLGVVKAYNPLMLESARHA 60
Query: 68 ACAIEFIHTATLLHDDVVDDSAL 90
A A+EF+HT +L+HDD+
Sbjct: 61 ALAVEFLHTYSLIHDDLPAMDDS 83
>gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
Length = 306
Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 13 EKVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++ + +L I + + +++ GGKRLRP L T M +N A
Sbjct: 19 QRTDRTLLDFIAPLPFNDGDLVASMRHGALLGGKRLRPFLVYTTGQMFGIAQNNLDAPAA 78
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A+E IH +L+HDD+ +D+ LRRG+ + +G ++L GD L S AF
Sbjct: 79 AVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQSLAFS 130
>gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 308
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
K+ + + + D + + +++ + + KR+R +LTL A L R + + LACA
Sbjct: 13 AKIESRLAELVRLDGPLDPLQGSLRHSLLAPAKRVRAVLTLVAARELGGRESDALDLACA 72
Query: 71 IEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+E IHT++L+ DD +D++A RRG + V+G T++L L+++A+
Sbjct: 73 VEMIHTSSLILDDLPCMDNAATRRGIPSNHRVFGEATAILASIGLMNRAY 122
>gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 634
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 14 KVNFLILKRICSDVEMIP----------DVVKYLIFSGGKRLRPMLTLATAL-MLEYRGD 62
+V+ ++ + S ++ + + + GKRLRP D
Sbjct: 254 RVSAVLRRFAGSRGALLRGIDDDLIPFVRIATEFLLAEGKRLRPAFCYWGWRGAGGPDCD 313
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105
V A AIE +H L+HDDV+D S RRG+ AA +
Sbjct: 314 EIVTAAAAIELLHACALIHDDVMDASDTRRGRPAAHRRFSRVH 356
>gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
Length = 290
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 81/279 (29%), Gaps = 23/279 (8%)
Query: 15 VNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
++ I + S I V+Y + SGGKR+RPML + L D
Sbjct: 11 IDEAIKHSLEDFGSKGVSIRAPVEYALTSGGKRIRPMLVCMFSKGLGMNRDVLDSALAIE 70
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
+ + D D R ++ S L+ + L A I + +++
Sbjct: 71 FIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRSNAKKLKS 130
Query: 132 ALSLVACTLAEGELR----------------QLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ Q + E +I KT LF
Sbjct: 131 QGVDPREVDFAYDTISEITDKNFGVNGVLGGQYEDMFFKNEGPEYVQSIINKKTGALFEI 190
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A L G + + G+ FQ+ DD+LD + ++G N F T
Sbjct: 191 ACASGWLFGGGDPLCVPQILEFSKTFGLLFQMKDDILDIHQDDQDVGLNYALLFGLDAAT 250
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ + + + G L+ M
Sbjct: 251 ELLN----SSIDKSISLLNYLKHHGLKDSSELEMLIEYM 285
>gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
Length = 348
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/338 (14%), Positives = 105/338 (31%), Gaps = 34/338 (10%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALMLE 58
L L + +++ + + + + + GK+ R L +
Sbjct: 23 LLALLDESFAEIDSGL-------PPHLWERALLGPAREFLRRPGKQFRARLVEVCWRLAG 75
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ L +E +H +L+ DD+ D S+ RRG A ++G ++ G+++
Sbjct: 76 GDSAMPIELPLVVELLHAGSLIVDDIEDGSSTRRGGPALHHLYGTSIALNTGNWMYFWPL 135
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS--------KTA 170
++ A Q E + KT+
Sbjct: 136 TLIDRLDQSSERSAEMHRRTRQTLVLCHQGQALDLALKVTELEQSEVPHVVRATTRSKTS 195
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L S A + ++ AG ++ V A+ +G LG+ Q++DD+ +
Sbjct: 196 ALMSLAAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDLGSLASDSRRHKGREDLRLA 255
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISV----ENLKKAF-IIMRENRALVDTEY 285
+ ++ + S + L +A ++ +
Sbjct: 256 RPTWPWAWAAQSASAQVFAELQQRAVLVSRGDSDRAALDELARALCELVGDTG-----WA 310
Query: 286 RAYSYGQKAKDSL-RCLPDSSWKKSLM-EVVDFCLQRL 321
R ++ A L L S +L E+ L+R
Sbjct: 311 RVHTRLSLALAVLGDALGPSPELSALEDEIAR--LERS 346
>gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68]
Length = 235
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 8 TLKDMEKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
+ +E+V +IL + + +V+Y + + GK LR L L A M E + +
Sbjct: 12 IERGLEEVKSIILSEMMVLHPAVTSKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123
A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ + + +
Sbjct: 71 YFAAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGL 130
Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + T+ GEL QL + ++T + YL I+ KTA LF A ++
Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
S + G G LG+AFQL DD++DY+ +
Sbjct: 191 GSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLD 228
>gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 358
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 71/315 (22%), Positives = 114/315 (36%), Gaps = 40/315 (12%)
Query: 42 GKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GK +RP L + L A E +HTA L+HDDV+D LRRG+
Sbjct: 50 GKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDVIDRDTLRRGQP 109
Query: 96 AARLVWGNQTSVLV----------------------GDFLLSQAFCMVIETKSQEALEAL 133
A ++ A C ++ EA +
Sbjct: 110 AVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAADIARAAEAAAVV 169
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-----VLFSAALEVSSLIAGVQN 188
A A GEL + L + EE I + A L +L+AG
Sbjct: 170 FDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAPLRAGALLAGADP 229
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ +A+ G +LG A+Q++DDVL G+ E GK+ D R GK T+ R
Sbjct: 230 GLARAMGEAGADLGAAYQVIDDVLGVFGDPGETGKSADGDLREGKATVLT------AHGR 283
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWK 307
++ ++ G + +++ A + E A A +A++ + LP D + +
Sbjct: 284 RIPAVRALLDAGPATPADIEAARRALEEAGAREHALDVAAELTVRARERIAALPLDETVR 343
Query: 308 KSLMEVVDFCLQRLN 322
+ L R +
Sbjct: 344 AEFADACHAVLTRRS 358
>gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
Length = 300
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 118/276 (42%), Gaps = 16/276 (5%)
Query: 16 NFLILKR-ICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIE 72
K + + + + + Y + +GGKRLRP++ L + E + + A A+E
Sbjct: 14 ERKFDKHCLSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALE 73
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+IHT +L+HDD+ +D+ LRRG+ + + T++L GD LL+ AF ++ + +
Sbjct: 74 YIHTYSLIHDDLPAMDNDDLRRGQPTNHVQFDEATAILAGDALLTDAFALIAQEAKLKPR 133
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY-------LHVIKSKTAVLFSAALEVSSLI 183
+ L L+ + + D+ E+ ++ + KT LFS A + ++I
Sbjct: 134 QRLKLIELLSRSAGSTGMVAGQLFDIRAENQTLTIEALKNIHRLKTGRLFSYACQAGAII 193
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + + + + G+A+Q+ +D+ D + GK D K T P +L
Sbjct: 194 SDASDKELKLIDEFAQAFGLAYQIHNDLQDVLLDSQSTGKEEHGDESLHKATYPSLLGVD 253
Query: 244 RGT----KREKNFWKSTINDGKISVENLKKAFIIMR 275
+ + K + ++ + +
Sbjct: 254 GAKAALEAEIETMHQVIFRLTKETRKDFNRLIAFLE 289
>gi|294790967|ref|ZP_06756125.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Scardovia inopinata F0304]
gi|294458864|gb|EFG27217.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Scardovia inopinata F0304]
Length = 392
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/313 (17%), Positives = 95/313 (30%), Gaps = 38/313 (12%)
Query: 24 CSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTAT 78
S + V + + S GGKRLR L A A D + + LACA+E TA
Sbjct: 38 PSLPPYVDAVREQAVRSCQGGKRLRAQLLGAVAQACGLSADLMPSALDLACALEIFQTAA 97
Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138
L+HDD++DDS RRG +A N+T S+ L +
Sbjct: 98 LVHDDIIDDSDTRRGAPSAHRALANETGPEENLEKNSENNSEEKNHIGIGLGIMLGDILA 157
Query: 139 TLAEGELRQLSLSKNL---------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
TL+ + S D+ + I Q
Sbjct: 158 TLSVDVAHRSSRQFPQSYALLEAFLDMHRQVEKGQIMDLAMESLPLTDPDLIEDQAKQTY 217
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM------------------------GKNI 225
+ + + + GK +
Sbjct: 218 WWKTSSYTTIAPLRLALIACGYDPHTASSIAHQVGTPLGLAFQLNDDVIDIISLTSGKPL 277
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
G D GK T+ + + ++ +K + G+ + ++ +M+ A+ + +
Sbjct: 278 GGDIIEGKRTVLLADTLRSCSQEQKTLLLRIYSSGRPQPDAVQDVISLMQSCGAIDKSRH 337
Query: 286 RAYSYGQKAKDSL 298
R +AK L
Sbjct: 338 RIALLNHQAKSIL 350
>gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115]
Length = 291
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFDLELTEAHYQVASALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED + +KT L + + LIA V+ V
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKTIHANKTGKLLTYPFVAAGLIAEVEYFV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWKS-------TINDGKISVENLKKAFIIMRENR 278
+ S ++K +R N
Sbjct: 257 QTLDEAVDILTGLEEKTEFSGGEIQKIIESLRLNG 291
>gi|59709779|gb|AAW88517.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
gi|170674503|gb|ACB30137.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
Length = 465
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 5/277 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ Y+ GK R L + L+ D ++ A+ +H ++L
Sbjct: 168 RSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGMLHESSL 227
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +++ A V + + + +
Sbjct: 228 LVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPLIGIFADELVN 287
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L ED + + + +++
Sbjct: 288 LHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGL---FRLGIKLMQAESAAAVDCVPLVN 344
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD L+ K + ED GK + P+I + + + +
Sbjct: 345 LIGLIFQIRDDYLNLSSREYSDNKGLCEDLTEGKFSFPIIHSIR--ADPGNMQLINILKQ 402
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
V+ + A M + T +A+
Sbjct: 403 KTSDVQVKRYAVAYMESMGSFEYTRSVITILIARARK 439
>gi|59709773|gb|AAW88513.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
Length = 466
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 5/277 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
+++ Y+ GK R L + L+ D ++ A+ +H ++L
Sbjct: 169 RSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGMLHESSL 228
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A ++G ++ +++ A V + + + +
Sbjct: 229 LVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPLIGIFADELVN 288
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
L G+ L L ED + + + +++
Sbjct: 289 LHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGL---FRLGIKLMQAESAAAVDCVPLVN 345
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+G+ FQ+ DD L+ K + ED GK + P+I + + + +
Sbjct: 346 LIGLIFQIRDDYLNLSSREYSDNKGLCEDLTEGKFSFPIIHSIR--ADPGNMQLINILKQ 403
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
V+ + A M + T +A+
Sbjct: 404 KTSDVQVKRYAVAYMESMGSFEYTRSVITILIARARK 440
>gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH]
gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH]
Length = 281
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 15/276 (5%)
Query: 15 VNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACA 70
+ I K + S + ++ +GGKR RP L L+ E +N A A
Sbjct: 1 MEDFIKKNLIKAPSFHPYYEKALNEMLLAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYA 60
Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE IHT +L+HDD+ +D++ LRRG + + T++L GD L + AF ++ ++
Sbjct: 61 IELIHTYSLIHDDLPTMDNADLRRGHPTLHVTYDEITALLAGDALNTYAFEVLSKSPFSS 120
Query: 129 ALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ + +N + ++ + +KTA L +A+L++ ++
Sbjct: 121 DVKIELIKILSENAGAGGMVLGQAIDCYFENKKLNLDELKFLHLNKTAKLIAASLQMGAV 180
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I + +++ L ++G++LGI FQ+ DD+LD E GK G D K T +L
Sbjct: 181 IVNLDKKLQEKLYNFGIDLGILFQVQDDILDVTMSSEEAGKTTGVD--ENKNTFVTLLGL 238
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFI-IMREN 277
K + N+ E L+K I+ +
Sbjct: 239 DGALKEADVLAQRLKNEISGFDEKLRKELEPILEKY 274
>gi|320591510|gb|EFX03949.1| geranylgeranyl pyrophosphate synthetase [Grosmannia clavigera
kw1407]
Length = 328
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/291 (19%), Positives = 103/291 (35%), Gaps = 5/291 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+I +YL GK R + A LE D+ ++ + +HTA+LL DDV D S
Sbjct: 40 IIRGPYEYLNGVRGKEFRTQIINAFDGWLEVPVDSLAVITRVVGMLHTASLLVDDVEDSS 99
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
+LRRG A ++G ++ +++ A V + +S + A+ L Q
Sbjct: 100 SLRRGLPVAHNIFGVPQAINSANYMYFVALQEVQKLRSHQRALAIFS--EELVSLHRGQG 157
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
D A + + ++ LG+ FQ+
Sbjct: 158 MDLFWRDTLTCPTEDDYLEMVANKTGGLFRLGIKLMQAESRSLVDCVPLVNILGLIFQIQ 217
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD + + K + ED GK + PVI + + + + E +
Sbjct: 218 DDYRNLVASEYTLNKGLCEDLSEGKFSFPVIHSIRS--DPADLQLLNILRLKTNDDEVKR 275
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCL 318
A M + T +A+ L + + +++ E++D +
Sbjct: 276 YAVNHMDRTGSFAYTRDVLAVLTTRARAMADALDEGMGRSRAIHEILDRLV 326
>gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1]
gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1]
Length = 290
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 119/303 (39%), Gaps = 33/303 (10%)
Query: 12 MEKVNFLILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
+EK++ I + + + Y + GGKR+RP + L D H
Sbjct: 4 IEKIDEAIHRHYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYD 63
Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----- 119
+A A+E IHT +L+HDD+ +D+ RRG++ + T+VL GD L F
Sbjct: 64 VAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKA 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ +E LS+ A + + L + V D L +I A
Sbjct: 124 GFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFX 183
Query: 180 SSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ I A V+ L G+ +G AFQ+ DD+LD E+GK +D K T P
Sbjct: 184 AAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPN 243
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L +I + LKKA I + E +A +K D +
Sbjct: 244 LLG--------------LDKSQEILDDTLKKAQAIFQNL------EKKANFNARKIIDII 283
Query: 299 RCL 301
L
Sbjct: 284 EGL 286
>gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein
[Desulfitobacterium hafniense DCB-2]
gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfitobacterium hafniense DCB-2]
Length = 318
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 97/304 (31%), Gaps = 15/304 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR-PMLTLATALMLEYRGDNHVLLACAI 71
++ LI + +D G+ R LT + ++ + A +
Sbjct: 24 AEMERLIRLSLNADSPT------------GELFRWAHLTRMSCECAGGDPEDALPGAIGM 71
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EF A + DDV D ++ + + +E
Sbjct: 72 EFFALALDIFDDVQDQDNENMPWRQLPDAQAINLAICLLMLSDEAISAIPDNRLFREVAA 131
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + G+ R+ V+ E Y + K L + A ++ +++ G + V
Sbjct: 132 TLHRTGICASNGQFREFIYDDRQQVSFEQYFEMAGQKAGSLTACACKIGAILGGAEEPVI 191
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L+ +G+NLGI Q+ +D+ D + + L L + + ++
Sbjct: 192 HGLEQFGINLGILNQIRNDLND-FLDFFRKSDFVNNKKTLPYVYLLNTLKAEAAERFKEL 250
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
+ + E Y QKA++ L +P K+++
Sbjct: 251 TQGHGEGAYGFGDREREYVRQLAAEEGVAPYCTVMFEIYCQKAREILEGIPVPEKNKENM 310
Query: 311 MEVV 314
E+V
Sbjct: 311 KELV 314
>gi|15806412|ref|NP_295118.1| geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
gi|6459152|gb|AAF10966.1|AE001985_3 geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
Length = 329
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 108/279 (38%), Gaps = 9/279 (3%)
Query: 12 MEKVNFLI-LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHV 65
+ +V L+ ++ +++ GGK +R L LA+A ++ +
Sbjct: 6 LARVLSLLPETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSESDTGWESAL 65
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
LA A+E L+HDD+ DDS RRG+ A + G ++ VGD L + + V +
Sbjct: 66 WLAAALELFQNWVLVHDDIEDDSEERRGRPALHHLCGMPVALNVGDALHAYMWAAVGKAN 125
Query: 126 SQEALEALSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A E + AEG+ L+ + ++ + +
Sbjct: 126 VPGAFEEFLQMVYRTAEGQHLDLAWVEGREWGLRPADYLQMVGLKTAHYTVIVPLRLGAL 185
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ + A G+ LG AFQ+ DDVL+ G+ + GK IG D GK TL V+
Sbjct: 186 AAGMAPQDAFTPAGLALGTAFQIRDDVLNLAGDPVKYGKEIGGDLLEGKRTLIVLDWLTT 245
Query: 245 GTKREKNFWKSTINDG--KISVENLKKAFIIMRENRALV 281
K + + + + + E+ ++
Sbjct: 246 APDDRKAIFLDQMRRHRADKDPAVIDEIHRWLLESGSVE 284
>gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R]
gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316]
gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909]
gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B]
gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515]
gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae
2603V/R]
gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909]
gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515]
gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B]
gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 120/303 (39%), Gaps = 33/303 (10%)
Query: 12 MEKVNFLILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
+EK++ I + + + Y + GGKR+RP + L D H
Sbjct: 4 IEKIDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYD 63
Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----- 119
+A A+E IHT +L+HDD+ +D+ RRG++ + T+VL GD L F
Sbjct: 64 VAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKA 123
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ +E LS+ A + + L + V D L +I A V
Sbjct: 124 GFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFV 183
Query: 180 SSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++ I A V+ L G+ +G AFQ+ DD+LD E+GK +D K T P
Sbjct: 184 AAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPN 243
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+L +I + LKKA I + E +A +K D +
Sbjct: 244 LLG--------------LDKSQEILDDTLKKAQAIFQNL------EKKANFNARKIIDII 283
Query: 299 RCL 301
L
Sbjct: 284 EGL 286
>gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
23877]
Length = 357
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 99/282 (35%), Gaps = 19/282 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90
++++ L GGKR+R +L A ++ + D A +IE + T L+HDD++DDSA
Sbjct: 45 ELLRDLSLRGGKRMRVVLLHEAARLVRDEPVDGLDAAALSIELLQTHGLVHDDLIDDSAT 104
Query: 91 RRGKVAARLVWGNQTSVL-----------------VGDFLLSQAFCMVIETKSQEALEAL 133
RRG + + + +L A V ++ ++
Sbjct: 105 RRGGPTTYHAYRERFPRHPQAALGLTVLAGDLALALSLRVLLDAELPVEVRQAMVEVQTR 164
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSSLIAGVQNSVRQ 192
+ + + + + + + + A L + +
Sbjct: 165 AATDTFVGQIADLERDFAPAVPDDDVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEE 224
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L+ Y +GI Q+ DD LD G+ MGK G D R G+ + V + E+
Sbjct: 225 ELRRYARLVGICGQMRDDYLDLFGDAAAMGKPTGTDLREGRRSYTVARLLSAVSGAERVL 284
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
+ + D + E + I Y ++A
Sbjct: 285 VEGALGDRACTPETVAAVREIGERRGVASRMRADMRRYAEQA 326
>gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 388
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 70/367 (19%), Positives = 122/367 (33%), Gaps = 59/367 (16%)
Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++V I I + + + + K LRP L +A A L + A A
Sbjct: 20 DEVLEHIEAAIGAQPALEDLRAPLLDYPLRAAKGLRPALCVAAARALGASRSAALPSAAA 79
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E +H A L+HDDV D+S RRG+ + +G T++ +GD +L+ A +++ L
Sbjct: 80 LELLHNAFLIHDDVEDESLARRGEPTLQRRYGQATAMNMGDAMLALALGPLLDNTGVIGL 139
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
V + E + + S A + A + + V
Sbjct: 140 GPALEVLDLVRETVVVTAAGQARELEWIRQGRWDFGSDYAAAYEALVVAKTAHYSFITPV 199
Query: 191 -------------RQALKSYGMNLGIAFQLVDD--VLDYRGEVNEMGKNIGEDFRNGKPT 235
R L +Y ++G+AFQ+ DD L GE GK D GK T
Sbjct: 200 VVGATIAEVRGDARAQLAAYARHVGVAFQITDDLLNLRAAGEPGAYGKESAGDLWEGKRT 259
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKA--FIIMRENR--------------- 278
L ++ A E++ + + + L +A +
Sbjct: 260 LILLHALHAAGAAERDEALAILARPRPDPAALARAELIAELHAAGHLDAVARARLLGEGG 319
Query: 279 ---------------------ALVDTEYRAYSYGQKAKDSLRCLPD----SSWKKSLMEV 313
L A ++G++A L L + L +
Sbjct: 320 DTRFKTEAEVAALMAVIEARGGLEFAAEVARAHGEQALALLGALEPWLEAGEGRDLLAAL 379
Query: 314 VDFCLQR 320
+ ++R
Sbjct: 380 PRYVIER 386
>gi|195333389|ref|XP_002033374.1| GM20447 [Drosophila sechellia]
gi|194125344|gb|EDW47387.1| GM20447 [Drosophila sechellia]
Length = 419
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 27/276 (9%)
Query: 42 GKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +LT+ T + L +E + + ++ DDV+D+S RRG+
Sbjct: 125 GKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQ 184
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLVACTLAEGELRQ 147
V + + ++ A +++ + T L Q
Sbjct: 185 PCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQ 244
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
L+ ++ + + I +S L + + + K+ + +G
Sbjct: 245 LNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHMAGYKDAEAFRQSKTILLEMGNF 304
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G GK + N L V+ + ++++ GK
Sbjct: 305 FQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCY---GKEEP 361
Query: 265 ENLKKAFIIMRENR-----AL--VDTEYRAYSYGQK 293
+++ + +E A+ ++ ++ Q+
Sbjct: 362 AKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQ 397
>gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium
MedeBAC82F10]
Length = 299
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+K + +L I S + I + Y + +GGKR+RP L ++ + A
Sbjct: 17 KKFDQTLLSHISKQASVDKRIKQSMVYFVKTGGKRIRPFLITTMGSLIGIKSQILNDFAL 76
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E +H +L+HDD+ +D+ RRGK+ + T+VL GD + ++++KS
Sbjct: 77 AVECVHLHSLIHDDLPAMDNDDYRRGKLTVHKKFDEATAVLAGDMFQVLSVKTLVDSKSL 136
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTE------EDYLHVIKSKTAVLFSAALEVSS 181
A + + + L L ++LD+ +D + KT LFS +
Sbjct: 137 SANQKVEAIQMLSKANGLEGLIAGQSLDIYMKKKSSVKDIETMYLLKTGALFSLCFNLLL 196
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
+ + + LK G +G FQ+ DD+LD G+ ++GK I +D +
Sbjct: 197 TVKKLNAQKAKDLKIIGDTIGKIFQVTDDMLDRWGDEKKVGKKINKDSKKANIAYKFNHQ 256
Query: 242 FQRGTKREKNFWKSTINDGKISVENL 267
+ +
Sbjct: 257 HCLKYLHQIQNKNYQSLKKFFTNNQK 282
>gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NN2025]
gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NN2025]
Length = 289
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
++ +N I + + + V Y + +GGKR+RP+L L + H
Sbjct: 2 KDKIKYINQAIKHYYAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAHY 61
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+A ++E IHT +L+HDD+ +
Sbjct: 62 QVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNH 96
>gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii]
Length = 303
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLL 67
+ ++ + + + E + ++ + GKR+RPML L TA L + + L
Sbjct: 20 LADIDSRLDQLLPVQGERDCVGAAMREGTLAPGKRIRPMLLLLTARDLGCAISHGGLLDL 79
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD +DD+ +RRG+ +G ++L LLS+AF
Sbjct: 80 ACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSKAF 132
>gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330]
Length = 291
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 21/275 (7%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATL 79
+++ SD + +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L
Sbjct: 21 QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSL 77
Query: 80 LHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+HDD+ + + L LL++A +
Sbjct: 78 IHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVKVDLISE 137
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+L+ + + G++ + ++ ED ++ +KT L + + LIA + V
Sbjct: 138 LSLAAGSFGMVAGQVLDMQGEG-QAISLEDLKNIHANKTGKLLTYPFVAAGLIAEAEQPV 196
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L+ G LG+AFQ+ DD+LD ++GK +D K T P L
Sbjct: 197 QDKLRRIGELLGLAFQVRDDILDVTASFEKLGKTPRKDLAAAKSTYPAFLGLDGAKNFFN 256
Query: 251 NFWK-------STINDGKISVENLKKAFIIMRENR 278
S ++K +R N
Sbjct: 257 QTLDEAVVILSDLEEKTVFSGGKIQKIIESLRLNG 291
>gi|119181731|ref|XP_001242054.1| hypothetical protein CIMG_05950 [Coccidioides immitis RS]
Length = 404
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 25/308 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA---------TLLHDD 83
+Y++ GK +R L A L+ ++ ++ + +HTA DD
Sbjct: 96 PYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSPVLMCSVDD 155
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V D S LRRG A ++G ++ +++ A + + ++ +A+ + L G
Sbjct: 156 VEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRG 215
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L L E+ + ++ + ++ V +G+
Sbjct: 216 QGMDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESEVSVDCIPLVNLMGL 272
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD L+ K + ED GK + P+I + + + +
Sbjct: 273 IFQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPIIHSIRSQPDN--LQLINILKQKTKD 330
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-------DSSWKKSLM---EV 313
E + A M + T A + L D K+ E+
Sbjct: 331 DEVKRYAINYMESTGSFAYTRKVVSQLRDNALVVIDELETTLEQAQDGQSSKA-EGSGEM 389
Query: 314 VDFCLQRL 321
V L R+
Sbjct: 390 VRSILNRI 397
>gi|321466396|gb|EFX77392.1| hypothetical protein DAPPUDRAFT_305827 [Daphnia pulex]
Length = 298
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 98/292 (33%), Gaps = 19/292 (6%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S E++ YL+ GK++R L+LA L + ++ ++ +H A+
Sbjct: 21 RSQDEILLQPFTYLLQVQGKQIRVKLSLAFDYWLHINPEKLNIINDVVQMLHNAS----- 75
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
L RG A ++G +++ +++ V+ +A E L G
Sbjct: 76 ------LLRGIPVAHSIYGVASTINSANYVYFLGLEKVLGLNHPQATEVFCEQLLELHRG 129
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ ++ + E+ ++ + + L + G+
Sbjct: 130 QGMEIYWRDSYVCPTEEEYRLMIVRKTGGLFGLAVRLMQLFSTTTIDMNPLMAIL---GL 186
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD + + K+ ED GK + PVI A + + +
Sbjct: 187 YFQIRDDYANLNLKEYAENKSFCEDLTEGKFSFPVIHAIRSRPDD--QQIINILRQRTKD 244
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ + ++ + + T A+ + L + L V+D
Sbjct: 245 MDVKRYCVSLLEKFGSFEYTRQTLIQLDLDARREIEKLGGNP---ILERVLD 293
>gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 349
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R L + A G + VL A A+E IHT +L+HDD++D RR + +
Sbjct: 60 GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 119
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + E A+ +A L + Q +
Sbjct: 120 GTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWTGP 179
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + KT L A + +++AG S +AL G ++G+AFQ VDD+L
Sbjct: 180 GAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLG 239
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A + + G + ++A +
Sbjct: 240 IWGDPQVTGKPVHSDLRRLKKTYPVLAALSADHPAARRLDALLASAGPLDDPAARRAAEL 299
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ E T A+ + A+ L +P S ++ L+ ++ + + R
Sbjct: 300 IDEAGGRRATVAEAHEHLAAARACLDRVPLARSARRDLLTLIPYLVDRT 348
>gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 285
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 110/277 (39%), Gaps = 16/277 (5%)
Query: 13 EKVNFLILKRICSDVEMI------PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++ + + + E + ++ Y +GGKRLRP L + + + ++
Sbjct: 13 KEFDKFLRDHL----ERLMVCSSFSSIINYTPLTGGKRLRPYLIALFSQAIGLPSELYMK 68
Query: 67 LACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--MVI 122
L A+E H+ +L+HDD+ D+ RRGK + + +++L GDFL+ +
Sbjct: 69 LGVAVELFHSGSLIHDDLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLYPVKVLQEL 128
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
++ T + + ++ I S
Sbjct: 129 TINEHLKFLLINEWIRTALSIIEGEYLDVTYEPSSNTKDVNRIHRLKTAELFGFCFSSPF 188
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I + + +K G+ G FQ++DD+ D + +GK G+D + +P++ ++
Sbjct: 189 ICADRMEEAKKMKETGLRFGHIFQVLDDIKDKLQPIEILGKTPGKDEKLNRPSILRFMSP 248
Query: 243 QRGTKREKNFWKSTINDGKISV--ENLKKAFIIMREN 277
+ + +K+ + + + E LKK + ++ +
Sbjct: 249 EEALNTSEKDFKTLLENIEYPEVCEGLKKLWKLIVKA 285
>gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51]
gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 319
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 97/304 (31%), Gaps = 15/304 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR-PMLTLATALMLEYRGDNHVLLACAI 71
++ LI + +D G+ R LT + ++ + A +
Sbjct: 25 AEMERLIRLSLNADSPT------------GELFRWAHLTRMSCECAGGDPEDALPGAIGM 72
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131
EF A + DDV D ++ + + +E
Sbjct: 73 EFFALALDIFDDVQDQDNENMPWRQLPDAQAINLAICLLMLSDEAISAIPDNRLFREVAA 132
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L + G+ R+ V+ E Y + K L + A ++ +++ G + V
Sbjct: 133 TLHRTGICASNGQFREFIYDDRQQVSFEQYFEMAGQKAGSLTACACKIGAILGGAEEPVI 192
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
L+ +G+NLGI Q+ +D+ D + + L L + + ++
Sbjct: 193 HGLEQFGINLGILNQIRNDLND-FLDFFRKSDFVNNKKTLPYVYLLNTLKAEAAERFKEL 251
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSL 310
+ + E Y QKA++ L +P K+++
Sbjct: 252 TQGHGEGAYGFGDREREYVRQLAAEEGVAPYCTVMFEIYCQKAREILEGIPVPEKNKENM 311
Query: 311 MEVV 314
E+V
Sbjct: 312 KELV 315
>gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72]
Length = 291
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 18/266 (6%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ +V+ Y + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 27 LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMD 86
Query: 89 ALRRGKVAARLVWG---------NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ + L LL+++ +L+ +
Sbjct: 87 DDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARSELPSQVKVDLIYELSLAAGSFG 146
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ G++ + ++ ED ++ +KT L + + LIA V+ SV+ L+ G
Sbjct: 147 MVAGQVLDMQGEG-QAISLEDLKNIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIGE 205
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK----- 254
LG+AFQ+ DD+LD E+GK +D K T P L
Sbjct: 206 LLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYPAFLGLDGAKNFFNQTLDEAVDI 265
Query: 255 --STINDGKISVENLKKAFIIMRENR 278
+ S E +++ +R N
Sbjct: 266 LKDLEEKTEFSGEEIQQIIESLRLNG 291
>gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 274
Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 8/276 (2%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
+ L + + V A A+E +H +LLHDDV+D RR + ++G ++L
Sbjct: 1 MVLLSCEAAGGDPADAVPAAVAVELLHNFSLLHDDVMDGDLTRRHRPTVWSLFGTSNAIL 60
Query: 109 VGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
GD +L A ++ T S+ A++ L EG+ +S S+ +DV + + +
Sbjct: 61 AGDAILGLAPRILSATGSEHALTAIDWFGKCVVKLCEGQAADISFSERVDVGIDACVAMA 120
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
++KT L + + L AG + AL+ +G +G+AFQLVDD+L G+ GK +
Sbjct: 121 RAKTGELLGTSCALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGDPAVTGKPV 180
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285
D + K +LPV A GT+ + + + + ++ E
Sbjct: 181 RSDLVDRKKSLPVTAALGSGTQAGRRLAELFHQE----ESDAGLLAELVEEAGGRDWAMQ 236
Query: 286 RAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320
A +AK L D L+ + +R
Sbjct: 237 TAEQAFARAKQWLEQAGLDKVAGGELLALAALTCRR 272
>gi|115675636|ref|XP_781061.2| PREDICTED: similar to geranylgeranyl diphosphate synthase1
[Strongylocentrotus purpuratus]
gi|115959556|ref|XP_001186881.1| PREDICTED: similar to geranylgeranyl diphosphate synthase1
[Strongylocentrotus purpuratus]
Length = 427
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 31/310 (10%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH------------- 75
++ + Y++ GK++R L+ A ++ DN + I
Sbjct: 27 ILMEPYNYILQVPGKQVRTKLSRAFNCWMDIPEDNIKKIRKLIYLFIFEKLSILSTYIEV 86
Query: 76 -TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+ DD+ D S LRRG A ++G ++ +++ V++ +A++ +
Sbjct: 87 LHYSYRIDDIEDSSKLRRGIPVAHSIYGIAQTINSANYMYFLGLKEVMQFDHPDAMKIFT 146
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
L +G+ + + E+ + K + S + L
Sbjct: 147 EQLVLLHQGQGMDIYWRDSYTCPTEEEYKEMVIKKTGGLFGLAVRLMQLFSANKSDFKPL 206
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
G+ FQ+ DD + + K+ ED GK + P+I + +
Sbjct: 207 SDIL---GLYFQIRDDYANLCSKQYTENKSYCEDLTEGKFSFPLIHGIRSQPEN--TQVM 261
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEY---------RAYSYGQKAKDSLRCLPDSS 305
S + ++ K ++ + + T A + KA+ SL
Sbjct: 262 SILRQRTEDMDVKKYCVDLLEKFGSFEYTRKVLFDLEKQIEAKPFTLKAEISLDW---RD 318
Query: 306 WKKSLMEVVD 315
K L +V
Sbjct: 319 MKDFLRSLVK 328
>gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes FSL J1-208]
Length = 98
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91
+ Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ R
Sbjct: 1 MLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFC 119
RGK V+G+ T++L GD LL+ AF
Sbjct: 61 RGKYTNHKVFGDATAILAGDALLTLAFS 88
>gi|330919993|ref|XP_003298844.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
gi|311327775|gb|EFQ93059.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 105/303 (34%), Gaps = 13/303 (4%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S ++ YL GK +R A L L+ + ++ + +HTA+LL DDV
Sbjct: 121 SKERILLGPYDYLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVVGMLHTASLLVDDV 180
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ +++ +A +++ + + +E + L G+
Sbjct: 181 EDSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMNNPKLIEIFTEELLNLHRGQ 240
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L +L E + ++ + ++ +G+
Sbjct: 241 GMDLYWRDSLTCPSEADYLEMVGNKTGGL---FRLAIKLMQAESETDVDCAPLVSTIGLL 297
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNG-KPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ++DD L+ + K + PVI A + + +
Sbjct: 298 FQILDDHLNLSPTSGYTTLKGLCEDLTEGKFSFPVIHAIR--ADPSNQILMNILKQKTTD 355
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-----PDS-SWKKSLME-VVDF 316
E + A M + + K ++ + + P+ ++L +
Sbjct: 356 EEVKRYALRYMESKGSFEYSRRVIEELRGKTEEHVSGIEVLLGPEGREGAEALRAMLARL 415
Query: 317 CLQ 319
L+
Sbjct: 416 VLK 418
>gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 363
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 108/311 (34%), Gaps = 20/311 (6%)
Query: 4 LEDLTLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61
L + + ++ + +++ L GGKR+R +L A ++
Sbjct: 22 FNALFEEYFDTLDRTLDAPSFSRYAPECVQLLRELSMRGGKRMRVVLLHEAAGLVSAEPA 81
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-------------- 107
+ A +IE +HT L+HDD++DDS RRG + + +
Sbjct: 82 EGLDAAALSIELLHTHGLVHDDLIDDSPTRRGGPSTYYAYRERFPRLPQAALGLTVLAGD 141
Query: 108 ---LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164
+ +L +A V ++ + + + + + + + + +
Sbjct: 142 LALGLSLRVLLEARLPVALRQAMAEAQTRAAADTFVGQIVDLERDFTGAVPGEDVLHSVA 201
Query: 165 IKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223
A + + L AG Q Q L+ Y +GI Q+ DD LD G+ GK
Sbjct: 202 DFKSARYSVLAPMRLGLLAAGGQPEAFDQELRRYARLVGICGQMRDDYLDLYGDAEVTGK 261
Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283
G D R+G+ + V E+ +S + D + E + I +
Sbjct: 262 PTGTDLRDGRRSYTVSALLSVTEGAERAVVESALGDPACTPEVIDAVREIGERHGVADTA 321
Query: 284 EYRAYSYGQKA 294
++A
Sbjct: 322 RAEMRRRAEEA 332
>gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13]
gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13]
Length = 306
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIP-------DVVKYLIFSGGKRLRPMLTL 51
M + + + ++ + + + +P +++ GGKRLRP L
Sbjct: 1 MSEIVQQAAFSEQLQAFRQRADRALLDFIAPLPFNEGNMVAAMRHGALLGGKRLRPFLVY 60
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLH 81
T M +N + A A+E IH +L+H
Sbjct: 61 TTGQMFGVSLNNLDVPAAAVECIHAYSLIH 90
>gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 289
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 14 KVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLL 67
++ + I + + + V++ +F GG R+RP L LA A
Sbjct: 6 RIEQALAAAIDTVAVPGCPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDYAAADAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
AIE +H A+L+HDD DDS LRRG + +G +VL GD L+ AF
Sbjct: 66 GVAIELLHCASLVHDDLPCFDDSPLRRGVPSVHRAFGEPLAVLAGDALIILAFEH 120
>gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8]
Length = 328
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 24/260 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + + K+ LIL + S E + +Y + +GGKR+RP+L L+T LML
Sbjct: 24 LDQVRQWQTEHLPKLLDLILTQ-ASLPEPLNAACRYAMSNGGKRVRPLLALSTFLMLIQT 82
Query: 61 GDN-------------HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQT 105
GD+ A+E IH+ +L+HDD+ LRRG+ +V+G
Sbjct: 83 GDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDI 142
Query: 106 SVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVACTLAEGELRQLSLSKNLDVT 157
++L GD L S AF ++ E + L + +N +T
Sbjct: 143 ALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDIKGENQVLT 202
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+++ + + KT L A++ + ++ AG Q + LK Y +G+AFQ+ DDVLD +
Sbjct: 203 QDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQDDVLDITTD 262
Query: 218 VNEMGKNIGEDFRNGKPTLP 237
+GK G D + K T
Sbjct: 263 TITLGKPAGSDEKLEKSTYV 282
>gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068]
gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068]
Length = 673
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 64/318 (20%), Positives = 128/318 (40%), Gaps = 32/318 (10%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEY------------------RGDNHVLLACAIEFI 74
+ + GGK RP +T+A L D A +IE
Sbjct: 331 IAYDFLAKGGKYSRPFITMAVHDALTGGHGTLPKMPAGGGEVQLDIPDTVKRAALSIETF 390
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H A+L+HDD+ DD A R G+ +G T++ VGD+L+ + +V + + +
Sbjct: 391 HKASLVHDDIEDDDAFRYGEETVHRRFGTPTAINVGDYLIGMGYRLVSKQSRAMGPDTAA 450
Query: 135 LVACTLAEGELRQ---------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ LA+ +R +++ ++ D L + KT+ F AAL + +AG
Sbjct: 451 DILDILADAHIRLSEGQGAELLWRDARDKRLSPLDALKIYALKTSPAFEAALLSGARLAG 510
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ L+ + NLG+AFQ+++D+ D++G+ + G+ T+ LA +
Sbjct: 511 DVTQYLEPLRQFARNLGVAFQILNDLGDWQGDSHNKMSAGGDTLAGRP-TVLWALALESL 569
Query: 246 TKREKNFWKSTINDGKISV----ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+++ + + S L + + +E + Q+A+ +
Sbjct: 570 APEKQSELLQLVTEHADSQMHPQARLARVRQLYQEAGVFEKASRLIEKHQQRAESIADKI 629
Query: 302 PDSSWKKSLMEVVDFCLQ 319
++ + ++D L+
Sbjct: 630 EPEELRRLMYYLIDSVLE 647
>gi|3395483|emb|CAA08919.1| dimethylallyltransferase [Drosophila melanogaster]
Length = 380
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 27/276 (9%)
Query: 42 GKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +LT+ T + L +E + + ++ DDV+D+S RRG+
Sbjct: 86 GKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQ 145
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLVACTLAEGELRQ 147
V + + ++ A +++ + T L Q
Sbjct: 146 PCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQ 205
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
L+ ++ + + I +S L + + + K+ + +G
Sbjct: 206 LNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTILLEMGNF 265
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G GK + N L V+ + ++++ GK
Sbjct: 266 FQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCY---GKEEP 322
Query: 265 ENLKKAFIIMRENR-----AL--VDTEYRAYSYGQK 293
+++ + +E A+ ++ ++ Q+
Sbjct: 323 AKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQ 358
>gi|320034476|gb|EFW16420.1| geranylgeranyl diphosphate synthase [Coccidioides posadasii str.
Silveira]
Length = 404
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 25/308 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA---------TLLHDD 83
+Y++ GK +R L A L+ ++ ++ + +HTA DD
Sbjct: 96 PYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSPVLICSVDD 155
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V D S LRRG A ++G ++ +++ A + + ++ +A+ + L G
Sbjct: 156 VEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRG 215
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L L E+ + ++ + ++ V +G+
Sbjct: 216 QGMDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESEVSVDCIPLVNLMGL 272
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD L+ K + ED GK + P+I + + + +
Sbjct: 273 IFQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPIIHSIRSQPDN--LQLINILKQKTKD 330
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-------DSSWKKSLM---EV 313
E + A M + T A + L D K+ E+
Sbjct: 331 DEVKRYAINYMESTGSFAYTRKVVSQLRDNALMVIDELETTLEQAQDGQSSKA-EGSGEM 389
Query: 314 VDFCLQRL 321
V L R+
Sbjct: 390 VRSILNRI 397
>gi|303318701|ref|XP_003069350.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109036|gb|EER27205.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 404
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 25/308 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA---------TLLHDD 83
+Y++ GK +R L A L+ ++ ++ + +HTA DD
Sbjct: 96 PYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSAVLICSVDD 155
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V D S LRRG A ++G ++ +++ A + + ++ +A+ + L G
Sbjct: 156 VEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRG 215
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L L E+ + ++ + ++ V +G+
Sbjct: 216 QGMDLFWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESEVSVDCIPLVNLMGL 272
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ+ DD L+ K + ED GK + P+I + + + +
Sbjct: 273 IFQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPIIHSIRSQPDN--LQLINILKQKTKD 330
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-------DSSWKKSLM---EV 313
E + A M + T A + L D K+ E+
Sbjct: 331 DEVKRYAINYMESTGSFAYTRKVVSQLRDNALMVIDELETTLEQAQDGQSSKA-EGSGEM 389
Query: 314 VDFCLQRL 321
V L R+
Sbjct: 390 VRSILNRI 397
>gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
Length = 328
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + I + ++Y +GGK LRP+L +A A +
Sbjct: 54 VTAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCVGGP 91
>gi|240272920|gb|EER36445.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H143]
Length = 392
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 100/278 (35%), Gaps = 15/278 (5%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ Y++ GK LR A L ++ + + +HTA+LL DDV
Sbjct: 91 KEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE 150
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG A ++GN + + L + L EG +
Sbjct: 151 DSSTLRRGVPVAHNIFGNGSDDKFCELL---------PRSGRGTETQKPECDKHLREGIV 201
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ TEEDYL ++ +KT LF A+++ ++ + +G+ F
Sbjct: 202 KPAPRDTLTCPTEEDYLEMVGNKTGGLFRLAIKL----MQAESDTGIDCVTLVNLMGLIF 257
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+ DD L+ K ED GK + P+I + + + + E
Sbjct: 258 QICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLIN--ILKQKTTDEE 315
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ A M + T KA + L +
Sbjct: 316 VKRYAVNYMESTGSFAYTRKTVMQLRDKALTLIDELEN 353
>gi|17137582|ref|NP_477380.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
gi|4689332|gb|AAD27853.1|AF132554_1 GM06581p [Drosophila melanogaster]
gi|7303618|gb|AAF58670.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
gi|17946048|gb|AAL49067.1| RE52884p [Drosophila melanogaster]
gi|220942720|gb|ACL83903.1| Fpps-PA [synthetic construct]
gi|220952876|gb|ACL88981.1| Fpps-PA [synthetic construct]
Length = 419
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 28/287 (9%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDD 83
V++Y + GK+ R +LT+ T + L +E + + ++ DD
Sbjct: 115 AQVLQYNVPR-GKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISDD 173
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLV 136
V+D+S RRG+ V + + ++ A +++ +
Sbjct: 174 VMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEIT 233
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQA 193
T L QL+ ++ + + I +S L + + +
Sbjct: 234 YITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 293
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
K+ + +G FQ+ DD LD G GK + N L V+ + ++++
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353
Query: 254 KSTINDGKISVENLKKAFIIMRENR-----AL--VDTEYRAYSYGQK 293
GK +++ + +E A+ ++ ++ Q+
Sbjct: 354 DCY---GKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQ 397
>gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505]
gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505]
Length = 364
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G ++GIAFQL DD L G GK G+D R GK T+ + L + R + S
Sbjct: 234 FGEDVGIAFQLRDDELGVFGSPQATGKPAGDDLREGKRTVLLALTWGRCDDAGRRLLGSV 293
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD-----SSWKKSLM 311
+ + + + E + + ++ + A E ++ + +L L D ++ + L
Sbjct: 294 LANPEATEEQIGEVAALIEDCGARAAHEEIIAAHREAGSRALERLGDEGVVSTASLEDLA 353
Query: 312 EVVDFCLQRLN 322
+ D R++
Sbjct: 354 VLADLLTHRVS 364
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIE 72
+ + + + + SGGKR+R +L +L + V L A+E
Sbjct: 9 EDLGQAAPELLEAAG-SVLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALE 67
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+ L+HDD++D + RRG AA V+
Sbjct: 68 LYQASALVHDDLMDGADTRRGLPAAHRVFARDHE 101
>gi|3915686|sp|P08836|FPPS_CHICK RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
Length = 367
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFI 74
+ V + +V++Y GGK R + +A L G + + IE
Sbjct: 51 EVGDAVARLKEVLQYN-APGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 109
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
L+ DD++D S RRG++ G + FLL + V++ ++ +
Sbjct: 110 QAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVH 169
Query: 135 LVACTLAEGELRQLSLS-------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L +L + + K+ +
Sbjct: 170 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMY 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + K+ + +G FQ+ DD LD G+ GK + N L V
Sbjct: 230 MVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD-SLRC 300
+ ++ + + V +K+ + + A E +Y Q+ +
Sbjct: 290 QRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNR 349
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K+ + + +R
Sbjct: 350 LP----KEIFLGLAQKIYKRQ 366
>gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 339
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 100/277 (36%), Gaps = 20/277 (7%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A +
Sbjct: 51 GKRIRGCLVFLMNQTQEGKPEDSLPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTIE 110
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED- 160
G + +VL+GD + + A + E ++ +A +K
Sbjct: 111 GPRRAVLLGDIMFATAIQSMAELSKEDGATVAHAIATVANGAYQELFWQTKTGKSRAHKL 170
Query: 161 -----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY- 214
Y H+I KT LF AA ++ ++ AG V ++G G A+Q+ DD+ D+
Sbjct: 171 LEKDLYEHIIYLKTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAYQIADDLEDFI 230
Query: 215 -RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
+ + + K+ + + +
Sbjct: 231 AWWRQPQENPEKLSPLLPALSYFCRQTGLTLPQQPASYWQKTLQHWCQRTGYKFIHCME- 289
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
++A+ + PD+ + + L
Sbjct: 290 -----------QEINLRLKQAESYIEFFPDNPYTQIL 315
>gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
marginale str. St. Maries]
gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Florida]
gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
marginale str. St. Maries]
gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Florida]
Length = 291
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L K++ +V + ++ + + + Y+I + GK +R L +A +
Sbjct: 17 VEDFASLVQKELAQV---VHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVFGVS 73
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + L+ AIE +H +L+HDD+ RRGK + + +G +VL G+ LL+ F
Sbjct: 74 TERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLTLTF 133
Query: 119 CMVIETKSQEALEALSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-F 173
++ A+ + AC Q+ + T + + I F
Sbjct: 134 ELLSTMNEGCAVRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELKTARLF 193
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
SAA E +++ G R AL YG LG AFQ DD+ D +
Sbjct: 194 SAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWEDGERC 241
>gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 237
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 4 LEDLTLKDMEKVNFLILKRI--------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
L ++ ++++ ++ + + + ++Y + GGK++R L A
Sbjct: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113
+ + + AIE IH +L+HDD+ +RRGK + + T+++ G+ L
Sbjct: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGE------LRQLSLSKNLDVTEEDYLHVIKS 167
L+ AF ++ K+Q S + +L Q+ ++ + E + K
Sbjct: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
KT L A E +++A + ++ L+ +G NLGI FQL DD+LD +
Sbjct: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
>gi|157831115|pdb|1FPS|A Chain A, Crystal Structure Of Recombinant Farnesyl Diphosphate
Synthase At 2.6 Angstroms Resolution
Length = 348
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFI 74
+ V + +V++Y GGK R + +A L G + + IE
Sbjct: 32 EVGDAVARLKEVLQYN-APGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 90
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
L+ DD++D S RRG++ G + FLL + V++ ++ +
Sbjct: 91 QAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVH 150
Query: 135 LVACTLAEGELRQLSLS-------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L +L + + K+ +
Sbjct: 151 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMY 210
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + K+ + +G FQ+ DD LD G+ GK + N L V
Sbjct: 211 MVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCL 270
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD-SLRC 300
+ ++ + + V +K+ + + A E +Y Q+ +
Sbjct: 271 QRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNR 330
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K+ + + +R
Sbjct: 331 LP----KEIFLGLAQKIYKRQ 347
>gi|297519902|ref|ZP_06938288.1| octaprenyl diphosphate synthase [Escherichia coli OP50]
Length = 44
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGG 42
++ + +LT +DM VN IL+++ SDV++I + Y++ GG
Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG 44
>gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018]
gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018]
Length = 286
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 59/309 (19%), Positives = 106/309 (34%), Gaps = 54/309 (17%)
Query: 9 LKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNH 64
+ +LK + + D + ++ +GGKR RPML L+ + N
Sbjct: 2 KDLLNSFEDYLLKNLPISKTFHPHFEDALADMLKAGGKRFRPMLLLSVVKSNKSLLVPNA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSV-------LVGDFLLS 115
+ +A +EF+HT +L+HDD+ LRRG + T++ L++
Sbjct: 62 MSVALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
A A + + G+ K + I KTA L +A
Sbjct: 122 NASLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHI-HKTARLIAA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+L++ ++I+ ++ L ++G++LG+ FQ+ DD++D E GK D
Sbjct: 181 SLKMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGKTTQNDGFKNSFV 240
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
+ L + A K
Sbjct: 241 NLL----------------------------------------GLDGAKKSADDLALKCI 260
Query: 296 DSLRCLPDS 304
DSL ++
Sbjct: 261 DSLNTFEEN 269
>gi|326916125|ref|XP_003204361.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like, partial
[Meleagris gallopavo]
Length = 165
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 54/159 (33%), Gaps = 7/159 (4%)
Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ + + L + + + + +A ++ YG ++ ++ +L D+ + E +
Sbjct: 11 TWKEQVFLSHSALLAKSCQAAMELAKHSAEIQDMAFRYGKHMSMSHKLHSDLQPFVKESS 70
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ Q R+ + GK ++ + KK ++ +
Sbjct: 71 SDATAFSLNCAPAV-------LHQEFLGRDAWIKQIREAQGKGNLMDYKKLQEAIKAGKG 123
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ +G +A +L P S + +L +V
Sbjct: 124 VTSAIDLCRCHGNRALAALESFPPSEARAALANIVHAVT 162
>gi|300766618|ref|ZP_07076535.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300495718|gb|EFK30869.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 167
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 1 MKML---EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ + E L K++ + + + D I D V L+ +GGK LRP +
Sbjct: 43 MQTIWQPESLVAKELAALKPYLATNVKIDNAAINDRVHDLLAAGGKFLRPGFFYLFSQFG 102
Query: 58 -EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
++ A A+E +H ATL+HDDV+D+S RR +G +
Sbjct: 103 PDHNTARLRAGAAAMELLHVATLIHDDVIDESPERRHVTTIHQDYGQRLLSNCS 156
>gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
27064]
gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
27064]
Length = 362
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 96/284 (33%), Gaps = 18/284 (6%)
Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90
++++ GGKRLR L A ++ + A ++E +HT L+HDD+VDD+ L
Sbjct: 51 ELLRDQSLRGGKRLRVALLHEAARLVTDAEVPGLDEAALSVELLHTHGLVHDDIVDDAPL 110
Query: 91 RRGKVAARLVWGNQTSVLVGD-----------------FLLSQAFCMVIETKSQEALEAL 133
RRG + + + +L +A + +
Sbjct: 111 RRGAPSVYYAYRAEFPGQERTAVGLAVLAGDLAAFLSVQVLLEAPLPDGLRLALAQEQTR 170
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ L + + + + KS + +
Sbjct: 171 ASAETVLGQFLDLERDVPPLPGDDFLHTVTEFKSARYSILAPLRLGLLAAGEDPEPYAGE 230
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L+ Y + +GI Q+ DD LD G+ GK +G D R+G+ T V ++
Sbjct: 231 LRRYAVLVGIYEQMRDDYLDLFGDPAVTGKPVGTDLRDGRRTYAVNALLAGVDGADRKRV 290
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+S + D + + + R Y ++A D
Sbjct: 291 ESALGDPGCDDATIAEIGALARRAGVDERLRATMLRYAREASDE 334
>gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Mississippi]
gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Puerto Rico]
gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Virginia]
Length = 286
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L K++ +V + ++ + + + Y+I + GK +R L +A +
Sbjct: 12 VEDFASLVQKELAQV---VHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVFGVS 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + L+ AIE +H +L+HDD+ RRGK + + +G +VL G+ LL+ F
Sbjct: 69 TERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLTLTF 128
Query: 119 CMVIETKSQEALEALSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-F 173
++ A+ + AC Q+ + T + + I F
Sbjct: 129 ELLSTMNEGCAVRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELKTARLF 188
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
SAA E +++ G R AL YG LG AFQ DD+ D +
Sbjct: 189 SAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWEDGERC 236
>gi|195476038|ref|XP_002090289.1| GE13024 [Drosophila yakuba]
gi|194176390|gb|EDW90001.1| GE13024 [Drosophila yakuba]
Length = 419
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 28/287 (9%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDD 83
V++Y + GK+ R +LT+ T + L +E + + ++ DD
Sbjct: 115 AQVLQYNVPR-GKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQSFFIISDD 173
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLV 136
V+D+S RRG+ V + + ++ A +++ +
Sbjct: 174 VMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEIT 233
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQA 193
T L QL+ ++ + + I +S L + + +
Sbjct: 234 YITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGFKDAEAFRQ 293
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
K+ + +G FQ+ DD LD G GK + N L V+ + ++++
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353
Query: 254 KSTINDGKISVENLKKAFIIMRENR-----AL--VDTEYRAYSYGQK 293
GK +++ + +E A+ ++ ++ Q+
Sbjct: 354 DCY---GKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQ 397
>gi|115753941|ref|XP_001195950.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
gi|115932639|ref|XP_001187762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 165
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------DNHVLLACAIEFI 74
+C + +V +Y GK RPM+ L + + D+ +A E I
Sbjct: 1 ELCGSCPELTEVAQYYFDGKGKSFRPMIVLLMSRVCNLHNSLTESIKDSQKKIAMITEMI 60
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
HTA+L+HDDV+D + RRGK + ++G + S+L GDF+LS + + + + LS
Sbjct: 61 HTASLMHDDVIDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALARIGDPDVVIVLS 120
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
V L +GE QL N + YL KTA L + +
Sbjct: 121 TVIEDLVKGEFMQLGSKDNENERFSHYLMKTYKKTASLMAHSC 163
>gi|157167321|ref|XP_001660254.1| candidate tumor suppressor protein [Aedes aegypti]
gi|108882899|gb|EAT47124.1| candidate tumor suppressor protein [Aedes aegypti]
Length = 463
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/368 (13%), Positives = 106/368 (28%), Gaps = 62/368 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ K LI + G ++ L + +
Sbjct: 96 SLRWLLSDEIANVALHLRKLVGSNHPLLRTA-KTLIYNDKNQQAWG-----LIVLLVSKV 149
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA----AR 98
+ LA E I T+ L+H +++ ++ +
Sbjct: 150 AGHADTIPEMEQDKSAGVLHSQRALAEVTEMIRTSHLIHQGMINLQSMDNAGNDLSGDSE 209
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+++GN+ ++L GD+LL+ A + ++Q+ +S LAE +N +
Sbjct: 210 MIFGNKMALLGGDYLLANASQQIASFRNQDLNMLISSAYRDLAESNFIGDRDEQNCPLPS 269
Query: 159 E-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ + + + S LG L
Sbjct: 270 KPVSTVAGKSSPDCSLEELGFGDLEDNTQPMSMESAMGNPEKEWSLRHVLGGGSLLGKSC 329
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----------------------- 248
+ + + + G+ A
Sbjct: 330 QGALMLAGQPEELQKQGYLFGRHLSLAWQACIDLQPFLHSTLPQGSQFSLVSAPVLFHLE 389
Query: 249 EKNFWKSTINDGKISVENLKK--AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ I G ISV+ + + L T++ + A L LP S
Sbjct: 390 YDPSIYAEIEKGSISVDAIDYRNLHQAIGTGPGLERTKHLMRKHSLAAMQVLDRLPPSDA 449
Query: 307 KKSLMEVV 314
+ +L ++
Sbjct: 450 RTALQNII 457
>gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 289
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 1 MKMLEDL--TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--M 56
MK LE+L + +++ + + I + +KY +FSGGKR+RP+L + T
Sbjct: 1 MKNLEELNTIIGELDSYLSNTFTYVDDSLAKIYESMKYSLFSGGKRIRPLLCMITYNELA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D + A +E IHT +L+H +DD LRR K V+ ++L GD LL
Sbjct: 61 ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120
Query: 115 SQAFCMVIETK 125
+ + ++ +
Sbjct: 121 NMSMEVISKYM 131
>gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
Length = 421
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ YG NLG+AFQ++DD+LD + ++GK DF++GK TLP I + K ++
Sbjct: 296 HKLYYDYGFNLGMAFQIIDDILDITQDSTKLGKPALSDFKSGKTTLPYIYLYHALPKEKQ 355
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ KS ++ ++ +K ++ ++ L +A YG KA L + + L
Sbjct: 356 VWLKSLFKQ-DLNAKDAQKLKDLLLDSP-LQKAREKALEYGNKALHIASMLNN----QKL 409
Query: 311 MEVVDFCLQR 320
++ ++R
Sbjct: 410 YAIIQAMIER 419
Score = 41.1 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 11 DMEKVNFL---ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++++ L ++ I SD + + K+L GK LR L L+ D L
Sbjct: 2 ELDRIAKLATEMIADINSDEAL--TLYKHL--ESGKMLRSKLVLSV-----VDSDEAYRL 52
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
IE I +A+LLHDDV+D S LRRGK + +GN+ ++++GD L S+AF
Sbjct: 53 CAVIELIQSASLLHDDVIDSSDLRRGKPSLNAQFGNKNAIMLGDILYSRAF 103
>gi|170062029|ref|XP_001866491.1| candidate tumor suppressor protein [Culex quinquefasciatus]
gi|167880062|gb|EDS43445.1| candidate tumor suppressor protein [Culex quinquefasciatus]
Length = 437
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/376 (12%), Positives = 114/376 (30%), Gaps = 79/376 (21%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ K L+ + G ++ L +
Sbjct: 71 SLRWLLSDEIANVALHLRKLVGSNHPLLKTA-KTLVYNDKNQQAWG-----LIVLLVSKA 124
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA----AR 98
+ LA E I T+ L+H +++ ++ +
Sbjct: 125 AGHAASIPEMDQDKSAGVLHSQRALAEVTEMIRTSHLIHQGIINLQSMDNAGNDLSGDSE 184
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------------------------ 128
+++GN+ ++L GD+LL+ A V ++Q+
Sbjct: 185 MIFGNKMALLGGDYLLANASQQVANLRNQDLNLLISSAYRDLAESNFIGDRDEQNNPLPS 244
Query: 129 ----------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
L + E + + + + L E+++ L + +
Sbjct: 245 KPSTAVSTLSPDCRLDELDFGDLEDNTQSMDVERALGHPEKEWSLRHVLGGGSLLGKSCQ 304
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ ++AG +++ +G +L +A+Q D+ + G + +L
Sbjct: 305 GALMLAGRSEEMQKQGYLFGRHLSLAWQACIDLQPFLLSNLPQGS---------QFSLVS 355
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + I + + L T+ + A L
Sbjct: 356 APVLFHLEYDPSIYAEIEKGRNSIEEIDYSSLHKAIGTGPGLERTKNLMKKHSHAAMAVL 415
Query: 299 RCLPDSSWKKSLMEVV 314
L S + +L ++
Sbjct: 416 DRLEPSDARTALQNII 431
>gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
Length = 711
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/299 (16%), Positives = 104/299 (34%), Gaps = 12/299 (4%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E+I ++Y+ K R L + L+ + I +H ++L+ DD+ D
Sbjct: 410 EEVIQAPIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSLILDDIED 469
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A +V+G ++ +L QA + ++E ++ L L G+
Sbjct: 470 NSRLRRGFPATHVVYGAGPAINSATYLYVQAVAAINSLDNREMMDVLLRQLQNLFLGQSL 529
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
L + N D + + + A L +++ R A ++ G+
Sbjct: 530 DLHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIAASNVNSPEKTRAAFAAFSHLSGL 589
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
+Q+ DD L+ K ED K + ++ + +
Sbjct: 590 YYQVRDDYLNITSAEYADKKGFAEDLDEQKFSYMLVHLARARPDMMVQVEGVFRSMRDGK 649
Query: 264 ---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL------PDSSWKKSLMEV 313
E+ + ++R + + T + + L P+ S + + +
Sbjct: 650 AEVAESKRYLVGLLRASGTVDATRKLLLGWQDAIVREIDALQAHFGAPNPSLRLLMESL 708
>gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 338
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 14/298 (4%)
Query: 18 LILKRICSDVEMIPDVVKYL---IFS--------GGKRLRPMLTLATALMLEYRGDNHVL 66
+ + + + VV+Y + + GGK +RP L L +A + +
Sbjct: 19 ALRQTVARLHPRLRHVVEYHRGWVDADGNPQPGGGGKLVRPALALLSAEAAGAPAEVGLP 78
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A A+E +H +LLHDD++D RR + A V+G ++L GD LL A +++E +
Sbjct: 79 AAVAVELVHDFSLLHDDLMDGDTERRHRPTAWTVFGADGAILAGDALLGLATQVLLEVEG 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS---LI 183
+ +A ++ + + Q ++ + + + +S ++
Sbjct: 139 EPGRKAAVILGAGVQDLVRGQAEDLLFESRSDVTVAETLHMEDGKTGALLACAASLGAVL 198
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AG V L +G LG AFQL+DD+L G+ GK + D ++ K ++PV++A +
Sbjct: 199 AGAPKEVVDGLAEFGSRLGTAFQLIDDLLGIWGDPAVTGKPVLSDLQSRKKSVPVVVALE 258
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
G + +++G E+L++ ++ T A + A LR L
Sbjct: 259 AGGPDAEELRAFLVSEGDRPTEDLERIAALVERAGGRDWTTAEADRQLKTAGAVLRSL 316
>gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b]
gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 301
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 13 EKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--HVLLA 68
+++ + + + + + ++ + GKR+RP+L L A + + LA
Sbjct: 20 QRLQSHLEQLLPCGQQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDMGCDSQQPGLLDLA 79
Query: 69 CAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
CA+E +H A+L+ DD+ +RRG+ +G ++L LLS+AF
Sbjct: 80 CAVEMVHAASLILDDIPSMDNAQMRRGRPTVHREFGANVAILAAIALLSRAFE 132
>gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
Length = 293
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 50/331 (15%)
Query: 4 LEDLTLKDM-EKVNFLILKRI-CSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ +L+ D+ +VN ++ I S + + ++Y I +GGKR+RP+L L T ML
Sbjct: 1 MTNLSKNDLISQVNQVLDDLIPQSKLGTNLEKSMQYSINAGGKRVRPLLLLLTLDMLNKD 60
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E IHT +L+H +DD RRGK+ V+G +VL GD LL++AF
Sbjct: 61 YQLGLATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEWKAVLAGDALLTKAF 120
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAV 171
++ + + L+ + S+ V + ++KT
Sbjct: 121 DVISNDTQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQSETQAVDISTLEQIHRAKTGA 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L + A+ ++ IA V V + L + +LG+ FQ+ DD+LD GE +++GK IG D N
Sbjct: 181 LLTFAVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDDLLDVYGEESKLGKKIGSDIDN 240
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
K T ++ ++ A E + +
Sbjct: 241 HKSTY----------------------------------VSLLGKDGA----EEKLAIHK 262
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A + L L + L ++V+ R +
Sbjct: 263 NAALNELEQLKEDYDISQLKDIVELFYTRDH 293
>gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13]
gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13]
Length = 290
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 10/234 (4%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+ N + +I + ++ +KY I +GGKR+R L + +L +IE
Sbjct: 12 SEFNKFLSLQIPNSNDINHKAIKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGASIE 71
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH +L+H +DD LRRGK+ + ++LVGD L S AF ++ K +
Sbjct: 72 MIHAYSLVHDDLPCMDDDDLRRGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKIDP 131
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYL--------HVIKSKTAVLFSAALEVSSL 182
E LA + + + + ++KT +L S + + S+
Sbjct: 132 ELKLECINLLASSIGSKGMVLGQSLDMIYEKKKPTKKIIEKIHRNKTGMLISTCILIPSI 191
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
I+ +NS + LK NLG+ +Q+VDD LD +V ++GKN G+D + K T
Sbjct: 192 ISRQRNSTHKNLKILSENLGLLYQMVDDYLDATSDVEKLGKNPGKDHQREKVTY 245
>gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 289
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 4/212 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDD-- 83
+ ++Y IF GG R+RP L LA + + A AIE +H A+L HDD
Sbjct: 24 PPRLAAAIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLP 83
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
DD+ RRGK + +G +VL GD ++ AF + LV
Sbjct: 84 CFDDAPTRRGKPSVHAAFGEALAVLAGDAMIVMAFEAIARAFMDRPHLLPPLVQTIARAA 143
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + +E + + A S + + A + + G LG
Sbjct: 144 GMPSGIAAGQGYESEPQLARS-QYQRAKTGSLFVAATVAGALAAGADGAPWRMLGEGLGE 202
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A+Q+ DD+ D +GK +G D G+P+
Sbjct: 203 AYQIADDIRDVASSPEAIGKPVGRDAALGRPS 234
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDNHVLLAC 69
+ ++N + + I I + ++Y + + KR P++ +A + AC
Sbjct: 22 ISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPTAC 81
Query: 70 AIEFIHTATLLHDDVVDDSA 89
A+E +H A+L+HDD+
Sbjct: 82 ALEMVHAASLIHDDLPCMDD 101
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 12/43 (27%), Gaps = 1/43 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPD-SSWKKSLMEVVDFCLQR 320
+ A KAK L + L VD+ R
Sbjct: 256 GVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADR 298
>gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter hominis ATCC BAA-381]
gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter hominis ATCC BAA-381]
Length = 284
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 105/279 (37%), Gaps = 17/279 (6%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLL 67
+E + + + S + + Y++F+GGK R L L M + + +
Sbjct: 7 LENFENYLRENPIKAPSFHPYFEEALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPI 66
Query: 68 ACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSV-------LVGDFLLSQAF 118
A AIE IHT +L+HDD+ D++ RRG + +++ + +S+A
Sbjct: 67 ALAIEMIHTYSLIHDDLPSVDNADFRRGIATIHKKYDEVSAILVGDALNTEAFYRISRAD 126
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + + + G+ K + + + KT L A+L
Sbjct: 127 LNDNIKIKCVEILSKNAGSAGMVLGQAIDCFFEK-KQLEISQVEFLHRLKTGALIGASLA 185
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + I+ + + G+ LG+AFQ+ DD++D GK +G D T +
Sbjct: 186 LGATISEIPKEKTDKIYEIGLKLGLAFQINDDLIDATSSDKIAGKPVGHDEFKNSFTNII 245
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + K + + K ++ +
Sbjct: 246 GIENSKLYKNRLIAEIL---NENFEPKLKKMVENLIEKY 281
>gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus]
gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus]
gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus]
Length = 236
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 3/215 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
DD + + K+ ED GK + P I A
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW 222
>gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277]
gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277]
Length = 388
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 12/238 (5%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
+ + + + S + + Y + SGGK R ML + R + +
Sbjct: 110 LAEFKAFLNAHLPSSPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHV 169
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A E +H+ +L+HDD+ LRRG+ + + + T++L GD L + AF + +
Sbjct: 170 ALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIAKAP 229
Query: 126 SQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + G +N + E+ + KTA L +A+L+
Sbjct: 230 LDADVRIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQA 289
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++AG+ + + G++LG+AFQ+ DD++D GK D T
Sbjct: 290 GCVVAGLDEAEAARIYDIGLDLGLAFQIADDIIDATQSAETAGKPTHNDGAKNSFTNL 347
>gi|119872063|ref|YP_930070.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
gi|119673471|gb|ABL87727.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
Length = 262
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLL 67
+E+V L+ S + DV++Y I + GK LRP+L L + L+ + +
Sbjct: 11 LEQVRELLQNVGKSVEPRSLRDVIRYYIETPGKLLRPILLLTFSYSLDRKSIFETKIIQA 70
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A +E +H +LL DDV+D RRG R ++G+ S++ D++++++
Sbjct: 71 AAIVELLHIVSLLQDDVMDKHDERRGVKTPRALYGDGRSIVASDWIIAES 120
>gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 349
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R L + A G + VL A A+E IHT +L+HDD++D RR + +
Sbjct: 60 GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 119
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKN 153
G +VL GD L + A + E A+ +A L + Q +
Sbjct: 120 GTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWTGP 179
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
V +Y + KT L A + +++AG S +AL G ++G+AFQ VDD+L
Sbjct: 180 GAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLG 239
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
G+ GK + D R K T PV+ A + + G + ++A +
Sbjct: 240 IWGDPQVTGKPVHSDLRRLKKTYPVLAALSADHPAARRLDALLSSAGPLDNPAARRAAEL 299
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321
+ E T A+ + A+ L +P S ++ L+ ++ + + R
Sbjct: 300 IDEAGGRRATVAEAHEHLAAARACLDRVPLARSARRDLLTLIPYLVDRT 348
>gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
Length = 295
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 9/233 (3%)
Query: 13 EKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ I I + + Y + GG R+RP + L+ A
Sbjct: 5 ARIETAIQSAIAGGQTAPSPGKLASALHYAVTPGGARIRPTILLSVASACGDDMPKLADA 64
Query: 68 ACAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A E IH A+L+HDD DD+ RRGK A +G +VL GD L+ AF ++ ++
Sbjct: 65 AAAALELIHCASLVHDDLPCFDDADTRRGKPAVHRAFGEPLAVLTGDSLIVMAFTVLTQS 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A+ L+ + + +E+ + A + + + + A
Sbjct: 125 AHLHPTRAIELMKVLAERTGMPNGICAGQGWESEDQIDLSAYHR-AKTGALFIAATQMGA 183
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
G +G AFQ+ DD+ D + +GK +G+D +G+P
Sbjct: 184 IAAGQDGAPWDELGARIGEAFQVADDLRDALYDQATLGKPVGQDDLHGRPNAV 236
>gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
bacterium GD 1]
gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
bacterium GD 1]
Length = 282
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 95/322 (29%), Gaps = 56/322 (17%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTL---ATALMLEYRGDNHV 65
M+ +L+ + + ++ ++ +GGKR RP L L A L G H
Sbjct: 1 MQNFETFLLENLPTSKSIHPTYEKALQQMLIAGGKRFRPALLLGVVAAYNSLMLDGARH- 59
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-------VGDFLLSQAF 118
A A+E +HT +L+HDD+ + L +
Sbjct: 60 -AAYAVELLHTYSLIHDDLPAMDDSPLRRGEPTLHVLYDEVTAILVGDALNTYSFEVLSN 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + ++ L+ + + + ++ + AA
Sbjct: 119 APFSDYTRVKLIQELAKNGGLNGMVLGQAIDCYFENKPLNVADIKILHTNKTAKLIAASL 178
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
I Q + L ++G+ LG+ FQ+ DD+LD E GK
Sbjct: 179 KMGAIIVGQEELGDKLYAFGIKLGLLFQIQDDILDVTQSSEEAGKLTN------------ 226
Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ E+ I+ L A + + L
Sbjct: 227 ------------------------NDEDKNSFVTIL----GLDVAMSEANALADELTHEL 258
Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320
++ K L ++ + R
Sbjct: 259 NSFDEN-LKNELSPLLTKYINR 279
>gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
Length = 177
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVL 66
D+ L+ K + + + + +I SGGK LRP L +A + + V
Sbjct: 13 LQADLSASLQLMEKSLKLKNKEVEQAILSMIHSGGKLLRPAYQLLFSAYGSDKDREKAVA 72
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
LA +IE +HTA+L+HDD+VD + RR R +GN +V GD+L F ++ + S
Sbjct: 73 LAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYAS 132
Query: 127 QEALEALS 134
++
Sbjct: 133 SMKSLQMN 140
>gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 286
Score = 52.6 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 96/302 (31%), Gaps = 52/302 (17%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + +++ SGGKRLR L A + + A AIE +H +L+HDD+
Sbjct: 28 VGEAMRHAT-SGGKRLRAFLVCEGAALHGVAPGPALDAAAAIEAMHAYSLVHDDLPAMDD 86
Query: 90 LRRGKVAARLVWGNQTS---------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
+ + + + LLS A + A A + +
Sbjct: 87 DDLRRGQPTVHVKWNEATAILVGDALQSLAFDLLSHAALPADRVVTLTAGMARAAGGMGM 146
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
G+ ++ + + + + + + ++ + +Y
Sbjct: 147 VHGQALDIAAE--TAPEPLSLPQITELQARKTGALIEWSAQAGPIMADADPGPMGAYARA 204
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG+AFQ+ DD+LD G+ E GK + +D GK T ++
Sbjct: 205 LGLAFQIADDILDVEGDEAETGKRLRKDTAAGKATFVSLM-------------------- 244
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + A + A ++L L E F + R
Sbjct: 245 ------------------GLDGAKAEAGRLVETACEALSVY--GERADGLREAARFVISR 284
Query: 321 LN 322
+
Sbjct: 285 QS 286
>gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 518
Score = 52.6 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 111/282 (39%), Gaps = 17/282 (6%)
Query: 42 GKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
GKR RP L AT L L D+ A A+E H A+L+HDD+ D+ R GK
Sbjct: 250 GKRWRPYLLAATYLALTGGAEVPDDVQRAAIAVECFHKASLVHDDIQDNDKERYGKPTIN 309
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++G ++ VGD LL + + ++ ++ + L +G+ +L S +
Sbjct: 310 ALYGVPIAINVGDILLGEGYRLLSLCDARALTAVAADAHIALCKGQGMELEWSVSPRPLT 369
Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
D++ I V F +L + + AG +R+ Y LGIA+QL+DD+ D++ +
Sbjct: 370 LDWVLEIFCNKTVPAFEVSLVLGLICAGDDEVLRRIFHQYSRALGIAYQLLDDIEDFKDD 429
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ + + + + ++R
Sbjct: 430 RPVALRPSAVLAVLCEQNPEPVFTRSLLECENLKAFLGRSENKP-----------LLRTT 478
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
L A +Y Q A +L + + K+ L V + L+
Sbjct: 479 --LERVGQMADTYHQAALTALHEIKNVELKRLLFRVTERILK 518
>gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 361
Score = 52.6 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 57/291 (19%), Positives = 101/291 (34%), Gaps = 30/291 (10%)
Query: 41 GGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GGKRLRP+L + + A+E +HTA ++HDDV+D +RRG++
Sbjct: 57 GGKRLRPLLLTGVYDQLGGTDTALAATIGAAVELLHTAFVVHDDVIDHDVVRRGRLNVSG 116
Query: 100 VWGNQT------------------------SVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+ + ++ L++ + + L ++
Sbjct: 117 TFAQRARAEGADDERAENLGAAAGILAGDLALTGAHRLVAFSDAPASTRRDLVHLFDHAV 176
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
E + SL + F L+ +++AG + L
Sbjct: 177 YVTAAGELSDVRYSLDLAPVGLADIVAMAAHKTAVYSFELPLQAGAVLAGADPRTVEWLS 236
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G +G AFQL+DD+ G+ GK++ D R GK T + A Q
Sbjct: 237 HVGRLVGTAFQLLDDIDGVFGDEQTTGKSVLTDLREGKLTPLMAHARQT---DAWPTISR 293
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDS 304
+ D ++ E + + E + E A + A+ LP+
Sbjct: 294 FVGDASLTHEGVDAVRQALEEAGSRSFIEDFAAEHLASARRLADEISLPEG 344
>gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
7454]
gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
7454]
Length = 279
Score = 52.6 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 67/329 (20%), Positives = 132/329 (40%), Gaps = 66/329 (20%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
K + + D + ++ + ++ D + + + Y S GKR+RP++ L T ML
Sbjct: 7 KEFDRILNTDKKIIDQAMKEKFVDDNP-LNEALIYASDS-GKRIRPIVFLETCRMLLGDK 64
Query: 61 -GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N + A ++E +H +L+HDD +D+ RRGK +G ++LVGD LLS A
Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124
Query: 118 FCM-----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172
F + + + + L+ + + + N + L V K+KT+ L
Sbjct: 125 FENILNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTSRL 184
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
F AAL ++ L + + L++Y LG+AFQL DD+LD
Sbjct: 185 FMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILDKY----------------- 227
Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ + + ++ + + +
Sbjct: 228 -----------------------------------DEIELNILSCISMDEAKKLLLDFNG 252
Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
KAK++++ ++ + + ++D+ +R+
Sbjct: 253 KAKENIKDFDNNDFH---IYLIDYLTERI 278
>gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106]
Length = 293
Score = 52.6 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L +E++ + + + + + S GKR R ML L A D V
Sbjct: 12 LLQTRLEEIAQGF----GAVSQPLGAAMSHGALSSGKRFRGMLMLLAAEASGGVCDTIVD 67
Query: 67 LACAIEFIHTATLLHDDVVDDSA 89
ACA+E +H A+L+ DD+
Sbjct: 68 AACAVEMVHAASLIFDDLPCMDD 90
>gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
Length = 289
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 1 MKMLEDL--TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--M 56
MK LE+L + +++ + + I + +KY +FSGGKR+RP+L + T
Sbjct: 1 MKNLEELNTIIGELDSYLSNTFTYVDESLAKIYESMKYSLFSGGKRIRPLLCMITYNELA 60
Query: 57 LEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D + A +E IHT +L+H +DD LRR K V+ ++L GD LL
Sbjct: 61 ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120
Query: 115 SQAFCMVIETK 125
+ + ++ +
Sbjct: 121 NMSMEVISKYM 131
>gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7]
Length = 303
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHPHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+ +G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium
BAC13K9BAC]
Length = 274
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 5/224 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ ++ N + + + V+ Y + +GGKRLRP++ A L
Sbjct: 2 EINKYIKNEITSFNNDLDIFLNKYKTNTKLYKVMCYSMKNGGKRLRPIIIKEVAKSLSLN 61
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + AIE +H+ +L+H +DD RRG+++ + ++L G+ LL+ AF
Sbjct: 62 KNQFLKSMIAIELVHSYSLIHDDLPCMDDDDYRRGRLSTHKKYDEAQAILAGNSLLTMAF 121
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAAL 177
++ + + +E LSL++ + L + + I + LF L
Sbjct: 122 NLLAQDSNPSLVELLSLLSGHEGLAGGQSLDVDTTEKKLNFKIIKKIHEQKTAKLFEFCL 181
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
+I+ + YG +G FQ++DDV DY + NE
Sbjct: 182 AAPFIISNKSQKEINMSRKYGKIIGTVFQIIDDVHDYENKDNEY 225
>gi|157834060|pdb|1UBX|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
Length = 367
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFI 74
+ V + +V++Y GGK R + +A L G + + IE
Sbjct: 51 EVGDAVARLKEVLQYN-APGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 109
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
A+L+ DD++D S RRG++ G + FLL + V++ ++ +
Sbjct: 110 QAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVH 169
Query: 135 LVACTLAEGELRQLSLS-------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L +L + + K+ +
Sbjct: 170 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMY 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + K+ + +G FQ+ DD LD G+ GK + N L V
Sbjct: 230 MVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD-SLRC 300
+ ++ + + V +K+ + + A E +Y Q+ +
Sbjct: 290 QRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNR 349
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K+ + + +R
Sbjct: 350 LP----KEIFLGLAQKIYKRQ 366
>gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462]
Length = 252
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 9/252 (3%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91
+ Y + +GGKRLRP+L L+ M + + A A+EF+HT +L+HDD+ +D+ LR
Sbjct: 1 MAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151
RG+ +G ++L GD LL+ AF ++ + ++ + ++A + +
Sbjct: 61 RGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPEKGAALVQILAEAAGSSGMVAGQVL 120
Query: 152 KNLDVTEEDY----LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
+ + ++KT L A + + SL + + + AL + G+ FQ+
Sbjct: 121 DMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQI 180
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV---ILAFQRGTKREKNFWKSTINDGKISV 264
DD+ D E+GK +D K T P + ++ + + +N +
Sbjct: 181 KDDINDVTKTTAELGKTADKDVAEHKNTFPELLGLAGAKQALATQFQQATAALNSLTVDA 240
Query: 265 ENLKKAFIIMRE 276
+LK +++
Sbjct: 241 ADLKSILAVLQA 252
>gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
Length = 298
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 78/309 (25%), Positives = 122/309 (39%), Gaps = 49/309 (15%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S E I ++Y + +GGKRLRP L T +L V A IE IH+ +L+HDD+
Sbjct: 28 SYPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDL 87
Query: 85 V--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ RRGK+ V+G ++L+GD LL+ AF M+ + +
Sbjct: 88 PALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSQKNLNLLSFEQITNIISKTS 147
Query: 143 GELRQLSLSKNLDVTEEDYLHVIK---------SKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + E I KT L +E++ +IAGV R
Sbjct: 148 AYAGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLV 207
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
L+ Y +G+AFQ+ DD+LD G E+GK +G D K T P IL
Sbjct: 208 LEEYAELIGLAFQVKDDILDIEGTFEELGKPVGSDDDLHKATYPSIL------------- 254
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+ +++ ++AK + + K L+ +
Sbjct: 255 -------------------------GMKESKKILNETVERAKKIIHNMFGEEKGKILISL 289
Query: 314 VDFCLQRLN 322
DF +R +
Sbjct: 290 ADFIRERKS 298
>gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5]
gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5]
Length = 302
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 12 MEKVNFLIL-----------KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + I R+ I + Y +F GGK LR L+L A M +
Sbjct: 4 LASIEDRIAYLGGLLTRYSGDRVKELFPEIVEEASYALF-GGKMLRGTLSLLVASMFTAQ 62
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + +A A+E +H A+L+HDD+ D S RRG+ + +G + ++ V L+ A
Sbjct: 63 VEKVLPIALAVELMHAASLVHDDIADASPTRRGRPSFWSKYGLEDAITVPHVLMPVA 119
>gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251]
Length = 282
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 54/321 (16%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
M+ +L + + + V+ ++ +GGKR RP L L
Sbjct: 1 MQNFENFLLNHLPASKSIHPTYEEAVQKMLIAGGKRFRPALLLGVVNAYNPLMIGGAYHA 60
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE +HT +L+HDD+ LRRG+ +++ T++L GD L + AF ++
Sbjct: 61 AYAIELLHTYSLIHDDLPAMDNSPLRRGEPTLHVLFDEVTAILAGDALNTYAFEVLSNAP 120
Query: 126 SQEALEALSLVACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + G + V D + ++ + AA
Sbjct: 121 FSDFTRVELIRELATNGGLNGMVLGQAIDCYFENRVLSIDDVKILHTNKTAKLIAASLKM 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
I + + + L +G+ LG+ FQ+ DD+LD E GK
Sbjct: 181 GAIIVGEEKLAETLYDFGIKLGLLFQIQDDILDVTQSSQEAGKLTN-------------- 226
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+ EN I+ L + A S +
Sbjct: 227 ----------------------NDENKNSFVTIL----GLDEAFLEAESLANTLLKEIDG 260
Query: 301 LPDSSWKKSL-MEVVDFCLQR 320
D K L +V + + R
Sbjct: 261 F-DEKLKSELSKLLVHY-INR 279
>gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 384
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 88/270 (32%), Gaps = 2/270 (0%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+D + + Y+ K +R A LE + + I +H ++L+ DD+
Sbjct: 86 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 145
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D+S RRG A ++G ++ ++ AF + + +S A+ L G+
Sbjct: 146 EDNSVPRRGSPTAHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQ 205
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L N V D + + + + LG
Sbjct: 206 GLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDARRFVTLLGRY 265
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKI 262
FQ+ DD + K ED GK + P+I + + G++
Sbjct: 266 FQIRDDYQNLTSAEYTSQKGFWEDLDEGKSSWPLIDCLTGSDPEQTMIKGILQHKGVGEM 325
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ + MR+ AL T +
Sbjct: 326 PMAMKRLILGKMRKGGALDSTFLLLQDMQE 355
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group]
Length = 349
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ V + + I ++Y + G G KR P+L +A +L +
Sbjct: 57 IADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAA 116
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E +H A+L+HDD D + RRG+ + +G +VL GD L A+ VI
Sbjct: 117 LPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVI 176
Query: 123 ETKSQEALEAL 133
Sbjct: 177 AHTPSPDPVPH 187
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ V + + I ++Y + G G KR P+L +A +L +
Sbjct: 52 IADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAA 111
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E +H A+L+HDD D + RRG+ + +G +VL GD L A+ VI
Sbjct: 112 LPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVI 171
Query: 123 ETKSQEALEAL 133
Sbjct: 172 AHTPSPDPVPH 182
>gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae]
Length = 362
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 88/270 (32%), Gaps = 2/270 (0%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+D + + Y+ K +R A LE + + I +H ++L+ DD+
Sbjct: 64 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 123
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D+S RRG A ++G ++ ++ AF + + +S A+ L G+
Sbjct: 124 EDNSVPRRGSPTAHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQ 183
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L N V D + + + + LG
Sbjct: 184 GLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDARRFVTLLGRY 243
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKI 262
FQ+ DD + K ED GK + P+I + + G++
Sbjct: 244 FQIRDDYQNLTSAEYTSQKGFWEDLDEGKSSWPLIDCLTGSDPEQTMIKGILQHKGVGEM 303
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ + MR+ AL T +
Sbjct: 304 PMAMKRLILGKMRKGGALDSTFLLLQDMQE 333
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ V + + I ++Y + G G KR P+L +A +L +
Sbjct: 50 IADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAA 109
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ A A+E +H A+L+HDD D + RRG+ + +G +VL GD L A+ VI
Sbjct: 110 LPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVI 169
Query: 123 ETKSQEALEAL 133
Sbjct: 170 AHTPSPDPVPH 180
>gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
Length = 284
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67
M++ + + + S + + + ++ +GGKR RPML L+ E D+ + +
Sbjct: 1 MQRFETYLSENLPEVTSFHPVYEEALGAMLQAGGKRFRPMLLLSIVDTYEPMLYDSALPV 60
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A A+E HT +L+HDD+ LRRG + T++L GD L S AF
Sbjct: 61 ALALEMFHTYSLIHDDLPAMDDADLRRGHQTLHKRFDEVTAILAGDALNSDAF 113
>gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii]
gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
Length = 301
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 11 DMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--D 62
+++ + + R+ + +++ ++ + GKR+RP+L + A L
Sbjct: 14 ELQALRDALQTRLDELLPPGQERDLVCAAMREGALTPGKRVRPLLLILAARDLGCDASQP 73
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E +H A+L+ DD+ +D++ LRRGK +G ++L LLS+AF
Sbjct: 74 ALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALLSRAF 131
>gi|157834058|pdb|1UBV|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
gi|157834059|pdb|1UBW|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
gi|157834061|pdb|1UBY|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
Length = 367
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/321 (16%), Positives = 106/321 (33%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFI 74
+ V + +V++Y GGK R + +A L G + + IE
Sbjct: 51 EVGDAVARLKEVLQYN-APGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 109
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
A+L+ DD++D S RRG++ G + FLL + V++ ++ +
Sbjct: 110 QAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVH 169
Query: 135 LVACTLAEGELRQLSLS-------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L +L + + K+ +
Sbjct: 170 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMY 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + K+ + +G FQ+ DD LD G+ G + N L V
Sbjct: 230 MVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGAVGTDIQDNKCSWLVVQCL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD-SLRC 300
+ ++ + + V +K+ + + A E +Y Q+ +
Sbjct: 290 QRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNR 349
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K+ + + +R
Sbjct: 350 LP----KEIFLGLAQKIYKRQ 366
>gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 442
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/368 (18%), Positives = 128/368 (34%), Gaps = 49/368 (13%)
Query: 1 MKMLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ L+ + + +L+ + ++ + + ++ + + GKRLR
Sbjct: 78 LDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLR-AVVARGKRLRAAFCYWGWRAA 136
Query: 58 E-YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR------------------ 98
D+ V A A+E +H A ++HDD++D SA+R G A
Sbjct: 137 GRDDTDDIVRAAAAMELVHAAAVVHDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAARSA 196
Query: 99 ---------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
T + L++A + + V T
Sbjct: 197 AGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRTGPSV 256
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
V + L +++ KTA L + +L+ G ++ +YG+ LG
Sbjct: 257 LDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYGVPLG 316
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGK 261
AFQL DD+L GE + GK+ +D KPT+ + L QR + E+ ++ ++
Sbjct: 317 EAFQLRDDLLGVFGEPDTTGKSNLDDITGAKPTVLLALMRQRASDAERQELRALLDPRPD 376
Query: 262 ISVENLKKAFIIMRENRALVDTEYRA-------YSYGQKAKDSLRCLPDSSWKKSLMEVV 314
L + I A + E A + LP + ++L +
Sbjct: 377 AVPGRLARFREIAVRTGAREEVERLIATRAETAARAVDTAHRT-GLLPAHAA-EALHTLA 434
Query: 315 DFCLQRLN 322
L R +
Sbjct: 435 RRSLARSH 442
>gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 439
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/368 (18%), Positives = 128/368 (34%), Gaps = 49/368 (13%)
Query: 1 MKMLEDLTLKDMEKV---NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ L+ + + +L+ + ++ + + ++ + + GKRLR
Sbjct: 75 LDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLR-AVVARGKRLRAAFCYWGWRAA 133
Query: 58 E-YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR------------------ 98
D+ V A A+E +H A ++HDD++D SA+R G A
Sbjct: 134 GRDDTDDIVRAAAAMELVHAAAVVHDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAARSA 193
Query: 99 ---------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
T + L++A + + V T
Sbjct: 194 AGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRTGPSV 253
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
V + L +++ KTA L + +L+ G ++ +YG+ LG
Sbjct: 254 LDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYGVPLG 313
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGK 261
AFQL DD+L GE + GK+ +D KPT+ + L QR + E+ ++ ++
Sbjct: 314 EAFQLRDDLLGVFGEPDTTGKSNLDDITGAKPTVLLALMRQRASDAERQELRALLDPRPD 373
Query: 262 ISVENLKKAFIIMRENRALVDTEYRA-------YSYGQKAKDSLRCLPDSSWKKSLMEVV 314
L + I A + E A + LP + ++L +
Sbjct: 374 AVPGRLARFREIAVRTGAREEVERLIATRAETAARAVDTAHRT-GLLPAHAA-EALHTLA 431
Query: 315 DFCLQRLN 322
L R +
Sbjct: 432 RRSLARSH 439
>gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1]
gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax]
Length = 522
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 76/386 (19%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY------- 59
L ++ ++ I I +D + + + Y+ GK+ R +L++ +L Y
Sbjct: 140 LCENKIKNIDDHIYNIIKTDYNNLDEFITYIYLYQGKKFRVILSILLKNILSYVDNVSSK 199
Query: 60 ---------------------------------------------RGDNHVLLACAIEFI 74
G+N + A E I
Sbjct: 200 NNFKFRNIQRNYSKSVKIAKSANNIISKKKLAIMNSANNNIYEKKIGENQYKIIAASEII 259
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H +LLHDDV+DDS RRG A +GN+ S+L GDFLL++A + T + +
Sbjct: 260 HMGSLLHDDVIDDSNNRRGAPALHKKYGNKISILSGDFLLARASSVFAGTGCPQICRRFA 319
Query: 135 LVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
V +L +GEL Q +L N + Y KTA LFS ++++ V +
Sbjct: 320 YVVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLFACIAILSFKNEKVIEL 379
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ G+++G+AFQL DD LDY+ + K I D N T P + ++ +
Sbjct: 380 CFNLGLHIGMAFQLYDDYLDYKPD-KNTNKPILNDLNNSIKTAPFLFSYNYNPDAVLS-- 436
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL------------ 301
IN +S ++ + + +L E + + ++A D L +
Sbjct: 437 --LINKKTLSDTDISNILLYIHRTNSLKKNELCSLLHIKRAADILVSIISYCRTAKNAEK 494
Query: 302 ------PDSSWKKSLMEVVDFCLQRL 321
+ +++L+ ++ L R
Sbjct: 495 ATSQKNDINQSREALINLILNILSRS 520
>gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
Length = 164
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 8 TLKDMEKVNFLILKRICSDVEMI-PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
+ +E+V +IL + + +V+Y + + GK LR L L A M E + +
Sbjct: 12 IERGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ +
Sbjct: 71 YFAAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSR 124
>gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22]
gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22]
Length = 286
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 9 LKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNH 64
+ +LK + + D + ++ +GGKR RPML L+ + N
Sbjct: 2 KDLLNSFEDYLLKNLPISKTFHPHFEDALADMLKAGGKRFRPMLLLSVVKSNKSLLVSNA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSV-------LVGDFLLS 115
+ +A +EF+HT +L+HDD+ LRRG + T++ L++
Sbjct: 62 MSVALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIA 121
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
A A + + G+ K + I KTA L +A
Sbjct: 122 NASLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHI-HKTARLIAA 180
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+L++ ++I+ ++ L ++G++LG+ FQ+ DD++D E GK D
Sbjct: 181 SLKMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGKTTQNDGFKNSFV 240
Query: 236 LP 237
Sbjct: 241 NL 242
>gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 289
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/299 (21%), Positives = 106/299 (35%), Gaps = 48/299 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ Y + GGK LR L L A + + A AIE +H +L+HDD+
Sbjct: 30 PLEAASDYALE-GGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDDLPAMD 88
Query: 89 AL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLA 141
RRG+ W T++LVGD L + AF V+ + L+ A
Sbjct: 89 DDDIRRGRPTVHKAWDEATAILVGDALQALAFEEVLACDAPPERLVALARGLAEAAGARG 148
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ L ++ V V + ++ + + ++ A + + YG L
Sbjct: 149 MVAGQMLDIAAESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADPAPFARYGAAL 208
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+AFQ+ DD+LD G+ E+GK + +D GK T
Sbjct: 209 GLAFQIADDLLDATGDAAEVGKAVDKDAAAGKATFV------------------------ 244
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + + RA + A + L + + L E F + R
Sbjct: 245 --------------SLQGVAAAKGRAEELVEVACNVLSPFGEQAAT--LREAARFVIAR 287
>gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
14672]
gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
14672]
Length = 453
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/332 (19%), Positives = 106/332 (31%), Gaps = 38/332 (11%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY----RGDNHVLLAC 69
V+ L + V +GGKR+RP T + +
Sbjct: 76 AVDPLFGDDLAERVAR-------FTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGA 128
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL---------------- 113
A+E + T L+HDDV+D S LRR + A + Q
Sbjct: 129 ALELLQTCALVHDDVMDGSTLRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLA 188
Query: 114 LSQAFC------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
L+ A + + + +A L +
Sbjct: 189 LAWADDLLAETPLAPRSARAVRRLWADMRTEMVAGQYLDVHGQATGSRSLPRALHAACLK 248
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + + +A ++ R+AL S G G+AFQL DD+ D G+ GK G
Sbjct: 249 SALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDLDDVFGDPRHTGKPAGG 308
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVDT 283
D R GKPT V LA R ++ G ++ +L++ ++ A
Sbjct: 309 DIREGKPTYLVALARARAEAAGDRRGLEVLDRSLGRGTLTPADLEEVREVLTRTGARSTV 368
Query: 284 EYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVV 314
E R + L D + L ++
Sbjct: 369 EGRIGRLVAQGLRHADGALLDPEGGRRLRRLL 400
>gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
ghanaensis ATCC 14672]
Length = 463
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/332 (19%), Positives = 106/332 (31%), Gaps = 38/332 (11%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY----RGDNHVLLAC 69
V+ L + V +GGKR+RP T + +
Sbjct: 86 AVDPLFGDDLAERVAR-------FTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGA 138
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL---------------- 113
A+E + T L+HDDV+D S LRR + A + Q
Sbjct: 139 ALELLQTCALVHDDVMDGSTLRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLA 198
Query: 114 LSQAFC------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
L+ A + + + +A L +
Sbjct: 199 LAWADDLLAETPLAPRSARAVRRLWADMRTEMVAGQYLDVHGQATGSRSLPRALHAACLK 258
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + + +A ++ R+AL S G G+AFQL DD+ D G+ GK G
Sbjct: 259 SALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDLDDVFGDPRHTGKPAGG 318
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFW----KSTINDGKISVENLKKAFIIMRENRALVDT 283
D R GKPT V LA R ++ G ++ +L++ ++ A
Sbjct: 319 DIREGKPTYLVALARARAEAAGDRRGLEVLDRSLGRGTLTPADLEEVREVLTRTGARSTV 378
Query: 284 EYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVV 314
E R + L D + L ++
Sbjct: 379 EGRIGRLVAQGLRHADGALLDPEGGRRLRRLL 410
>gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Callithrix jacchus]
Length = 261
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-------LA 68
L + + S E + ++ +Y GK RP++ A +N +A
Sbjct: 83 ETLFQELLISTSE-LKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIA 141
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A + +
Sbjct: 142 LIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTT 201
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ L+ V L GE QL +N + YL KTA L + + +
Sbjct: 202 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVCTFC 257
>gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
saccharovorans 345-15]
gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
saccharovorans 345-15]
Length = 310
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/323 (16%), Positives = 99/323 (30%), Gaps = 42/323 (13%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDV-----VKYLIFSGGKRLRPMLTLATALM 56
+ + K E +I + S V + Y++ GGK R +T+ A
Sbjct: 8 EEFRAILSKW-ESTRTMIEPELNSIVSRLEMAGLEGLASYIVK-GGKMFRGFMTMLFAEA 65
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
D A A+E + A+L DD++D A RRG +A +++G S + L+
Sbjct: 66 AGGNLDRAKDAAIAVELVQGASLALDDIIDKDAERRGGPSAWVLYGIGKSAMASLLLVPT 125
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A +V + +++ + + S V S +
Sbjct: 126 ALKLVEQYGPLALSYSITAWESMVRGEIMDAYSSLNLEPVEYLQL----ASLKTGSLFSL 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+IA + +YG +G A+QL DD+ D+ + R
Sbjct: 182 ASTLGVIAANHEEYAERAWNYGNIVGTAYQLADDITDFANYARGAKDKLDPSERLFLRWA 241
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
G+ + + + +++
Sbjct: 242 ----------------ETELKARGE------DEVIE-----KGVEY----LNDILKRSIS 270
Query: 297 SLRCLPDSSWKKSLMEVVDFCLQ 319
SL LP K + E+ F
Sbjct: 271 SLSFLPPGPATKMIAELPWFMAS 293
>gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
Length = 328
Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 62/319 (19%), Positives = 119/319 (37%), Gaps = 40/319 (12%)
Query: 15 VNFLILKRICSDVEMIPDV--------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
+ + K + + + V+Y+I + GKR+R L L + + +
Sbjct: 10 IRARLDKELTRQIPKLFSAFGPQQIKTVQYIINN-GKRIRGCLVCLVNHALGGQIADALP 68
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A AIE I A+L+HDD VD+ +RR + A V G + +VL+GD + + A ++E +
Sbjct: 69 RAVAIECIQAASLIHDDYVDNDTIRRKRPATWTVEGPRRAVLLGDMMFATAIQSMVELSN 128
Query: 127 QEALEALSLVACTLAEGELRQLSLSKN------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + +A L L+K + Y +I KT LF AA ++
Sbjct: 129 ADGIAVTRAIATVANGAYQEPLLLAKPAAGRALDLNEQTIYERIIYLKTGALFGAACQLG 188
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED-------FRNGK 233
++ AG ++G G A+Q+ DD++++ ++
Sbjct: 189 AIAAGAPEERCAHAYAFGARTGEAYQIADDLVEFVSVWGAPQEHTERSPALFPVLNFFCY 248
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T I ++ + W I + ++ + +
Sbjct: 249 KTGLTIPCHLAESQHSLHDWCQYIGMDF------------------IGYMKHEIDARVKS 290
Query: 294 AKDSLRCLPDSSWKKSLME 312
A+ + P + + K L E
Sbjct: 291 AESYVGQFPSNIYGKMLAE 309
>gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 325
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 110/298 (36%), Gaps = 10/298 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ I + ++ + GK +R L A L D +++ + +H A+L+ DD+
Sbjct: 21 NESAILEPFTFITSNPGKEIRGKLIEAFNTWLNVPTDTLLVITKVVNMLHAASLMVDDIE 80
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
DDS LRRGK A ++G ++ +++ A+ + ++ L EL
Sbjct: 81 DDSQLRRGKPVAHKIYGIPQTINTANYVYFLAYQELFALRNNPTTSPPRKDLDALVTEEL 140
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFS-------AALEVSSLIAGVQNSVRQALKSYG 198
L + L++ D L + + + V ++A ++
Sbjct: 141 LSLHRGQGLEILWRDSLQCPSEEEYISMVNNKTGGLLRMGVKIMMACGTTNIGVDYVPLV 200
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G+ FQ+ DD+++ + K ED GK + PV+ + +
Sbjct: 201 NLIGVFFQIRDDLMNLQSTEYTSNKGFAEDLTEGKFSFPVVHGIH--ADTSNRQILNVLQ 258
Query: 259 DGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ ++++ ++ T K + + L ++ +++++
Sbjct: 259 KRPTTPTLKVHTISYLKDHTKSFEYTLSVLKILEAKTRAEIARLGGNAGLDRIVDLLH 316
>gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267]
gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267]
Length = 659
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 12/238 (5%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
+ + + + S+ + + Y + SGGK R ML + R + +
Sbjct: 381 LAEFKAFLGAHLPSNPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHV 440
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A E +H+ +L+HDD+ LRRG+ + + + T++L GD L + AF +
Sbjct: 441 ALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIARAP 500
Query: 126 SQEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + G +N + E+ + KTA L +A+L+
Sbjct: 501 LDADARIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQA 560
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++AG+ + + G++LG+AFQ+ DD++D GK D T
Sbjct: 561 GCVVAGLDETEAARIYDIGLDLGLAFQIADDIIDATQSAETAGKPTHNDGAKNSFTNL 618
>gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302]
gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302]
Length = 291
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 111/289 (38%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ + V + + + + Y + +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVPITQEHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---------VLVGDFLLSQ 116
+A A+E IHT +L+HDD+ + + L L++Q
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDPYALIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A +L+ + + G++ + + E+ + +KT L S
Sbjct: 124 ADLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEG-KHLNLEELQTIHANKTGKLLSFP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + +IAG+ + ++ LK+ G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGK-------ISVENLKKAFIIMRENR 278
P +L ++ + E + K +R N
Sbjct: 243 PALLGLEQAKAFCNQTLDQANAKLEEISQVVSFDKEPIVKIVESLRING 291
>gi|189198934|ref|XP_001935804.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187982903|gb|EDU48391.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 418
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 104/303 (34%), Gaps = 13/303 (4%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
S ++ YL GK +R A L L+ + ++ + +HTA+LL DDV
Sbjct: 121 SKERILLGPYDYLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVVGMLHTASLLVDDV 180
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D S LRRG A ++G ++ +++ +A +++ + + +E + L G+
Sbjct: 181 EDSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMSNPKLIEIFTEELLNLHRGQ 240
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L +L E + ++ + ++ +G+
Sbjct: 241 GMDLYWRDSLTCPSEADYLEMVGNKTGGL---FRLAIKLMQAESETDVDCAPLVSTIGLL 297
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNG-KPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
FQ++DD L+ + K + PVI A + + +
Sbjct: 298 FQILDDHLNLSPTSGYTTLKGLCEDLTEGKFSFPVIHAIR--ADPSNQILMNILKQKTTD 355
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS---LRCL--PDS-SWKKSLME-VVDF 316
E + A M + + K + + L P+ ++L +
Sbjct: 356 EEVKRYALRYMESKGSFEYSRRVIEELRGKTDEHVRGIEGLLGPEGREGAEALRAMLARL 415
Query: 317 CLQ 319
L+
Sbjct: 416 VLK 418
>gi|226468292|emb|CAX69823.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
Length = 176
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ +G +LG+AF L+DDVLD+ + ++GK G D + G T PV+ A QR +
Sbjct: 47 QRHIDDMYDFGKHLGMAFSLIDDVLDFVTDEAKLGKPSGADLQMGIATGPVLFAAQRYPE 106
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ DG + ++A +++++ + T A + Q A+ L DS +
Sbjct: 107 LNTILLRQFSLDG-----DTERALELVQQSDGVGQTRMLAEFHFQAAQRCLFQFRDSLSR 161
Query: 308 KSLMEVVDFCLQR 320
K+L+ V LQR
Sbjct: 162 KALLHVAANFLQR 174
>gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA47368]
Length = 291
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 13/271 (4%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTS-------VLVGDFLLSQ 116
+A A+E IHT +L+HDD+ +D+ RRG++ +G + L L++Q
Sbjct: 64 QVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A +L+ + + G++ + ++ E+ + +KT L +
Sbjct: 124 ADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEH-QHLSLEELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENL 267
P +L + + + L
Sbjct: 243 PALLGLEESIAFCNQTLDQANEKLEEIAQQL 273
>gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Weiss]
gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum MopnTet14]
gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
Length = 292
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K+ + + + + + ++Y + GGKR+RP+L A ++ R D + A
Sbjct: 9 SKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRRD-VLDTAI 67
Query: 70 AIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A+E+IHT+TL+ DD +D+ +RRGK + + +++L L+ A+
Sbjct: 68 AVEYIHTSTLIADDLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAY 118
>gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens]
Length = 341
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI----------FSGGKRLRPMLTLATAL 55
L ++ ++ + + +V ++ + +L +R + L TA
Sbjct: 96 SLVSAEVSSLSKHMRNLVRIEVPVLGEAATHLFAGSNGGNSGGKK----IRATMVLLTAR 151
Query: 56 ML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
L LA IE +HTA+L HDDV+D + RRG + +G++ ++L GDF
Sbjct: 152 ALRKQGSSNMRQRKLAEIIEIVHTASLFHDDVIDGADTRRGCPSVSAKFGDKVAILAGDF 211
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKT 169
LL++A + + ++ +E +S+V L GE+ Q+ T E YL KT
Sbjct: 212 LLARACVALAKLENLAVVELISVVIEHLVRGEIIQMRPESGTSDTHALLEAYLQKTFYKT 271
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + A ++L+ + A +YG ++G+AFQLVDD+LD+ E+GK D
Sbjct: 272 GSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILDFEASDLELGKPALADL 331
Query: 230 RNGKPTLPVI 239
+ G T
Sbjct: 332 QMGLVTAFAC 341
>gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
Geranyltranstransferase (farnesyldiphosphate synthase)
or Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 349
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 75/325 (23%), Positives = 130/325 (40%), Gaps = 18/325 (5%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRGD 62
V+ + + + I V Y GK +RP L LA A L
Sbjct: 25 AVHPQLRSTVETLPGSIRRVAMYHFGWEHADGSPAAEQPGKAIRPALVLAAARALGAEEA 84
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-- 120
V A A+E H TLLHDD+VD+ RR + A V+G +++ GD + + A M
Sbjct: 85 PAVKAAAAVELAHNFTLLHDDIVDEDVTRRHRATAWTVFGVPDALIAGDAMSALALRMLA 144
Query: 121 ---VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + A A ++ + +V+ ++ L + +KT L A+
Sbjct: 145 EDPHPASAAASARLAACIIELCAGQQADCAFEQRGPREVSLDECLAMATAKTGALLGASC 204
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +L AG A+ ++G G+AFQL+DD++ G+ + GK G D K +LP
Sbjct: 205 AIGALYAGAGEEEVAAMDAFGREAGLAFQLIDDLIGIWGDPDRTGKPAGADLVAHKKSLP 264
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
V+ A GT + ++ A + + +A +A +
Sbjct: 265 VVAALASGTAA-GEELAELYARPALDAAAVRAAADAVERAGGRDWAQAQAAERMGRAVEH 323
Query: 298 LR-CLPDSSWKKSLMEVVDFCLQRL 321
L +PD + ++ + +F +R
Sbjct: 324 LARAVPDLAAAGDMLALAEFVTRRT 348
>gi|330917321|ref|XP_003297764.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
gi|311329353|gb|EFQ94125.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
Length = 394
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 101/279 (36%), Gaps = 4/279 (1%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ I + +Y+ GK R + A L+ ++ ++A + +HTA+LL DD+
Sbjct: 101 KEKAIKNPFEYIASQPGKEFRTRVLEAFNEWLQISDESLKVIANVVRTLHTASLLIDDIQ 160
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRG+ A V+G ++ ++ A + + + EAL + +
Sbjct: 161 DSSVLRRGRPVAHRVYGVAQTINSANYHYFLALQELRKLDN--QTEALMIYETEMLRLHQ 218
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
Q D + + ++ + ++S R LG+ F
Sbjct: 219 GQGMELYWRDTSTCPTEDDYLEMVSNKTRGLFRLAIRLMQSRSSSRMDCIPLVQLLGLIF 278
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
Q+VDD + K ED GK + PVI + + + S + ++
Sbjct: 279 QIVDDYKNLSDVDYTQAKGACEDITEGKFSFPVIHSIR--SDPTNFQLLSILAQKPTDMD 336
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
A + ++L T + +A + +
Sbjct: 337 IKMSAMECIERTKSLEYTRTVVAALVARAHQVVDEMDQG 375
>gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
Length = 346
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 106/275 (38%), Gaps = 17/275 (6%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A V
Sbjct: 59 GKRIRGCLVFLMNQTQEGKLEDALPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTVE 118
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED- 160
G + +VL+GD + + A + E + +A +K +
Sbjct: 119 GPRRAVLLGDIMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQTKTRERRLHKL 178
Query: 161 -----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
Y H+I KT LF AA ++ ++ AG + ++G G A+Q+ DD+ D+
Sbjct: 179 LEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFI 238
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ KN+ + S + L+ +
Sbjct: 239 AWWTQPQKNLKTLSSLLP----------ALHYFCHKTGLTLPRHTFSSQKALQDWSQRI- 287
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
++ + E ++A+ + P++ + + L
Sbjct: 288 GHKFIYYMEQEINLRLKQAESYIEFFPNNPYTQIL 322
>gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a]
gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate
synthase, Bifunctional short chain isoprenyl diphosphate
synthase) [Frankia alni ACN14a]
Length = 358
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLACAIEFIHTAT 78
L+ I +D++ V + ++ SGGK++RP D V A A+E +H
Sbjct: 23 LRDIDADLDPFVRVAEDVLLSGGKQVRPAFCYWGWRGAGGPDCDEIVTAAAALEVLHACA 82
Query: 79 LLHDDVVDDSALRRGKVAARL 99
L+HDDV+D S LRRG +A+
Sbjct: 83 LVHDDVMDGSQLRRGAPSAQR 103
>gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 689
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 25/325 (7%)
Query: 8 TLKDMEKVNFLILK-RICSDVEMIPDVVKY---LIFSGGKRLRPMLTLATALMLEYRGD- 62
D+++V R+ E+ D + + G +RP L L + +L +
Sbjct: 14 LQADLDRVRDAFGPVRVHGRPEL--DALTHEETGASRG--LVRPTLALLSYYVLTDPSEP 69
Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
VL A A E +H L HDDV+D + RRG+ +A +WG ++L GD + +
Sbjct: 70 ADDRAVLAAAAAELLHLGALYHDDVMDHAYERRGRPSANALWGQHLAILAGDCV-MLSGL 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
++ + + + + G +R+ + +EE YL + KTA LF+ A +
Sbjct: 129 GMLAELGRREVAEGVAASERMCAGMVRESADLHAASRSEESYLQAVGGKTAELFALACRL 188
Query: 180 SSLIAGVQNSVRQALKS-----YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
++ A ++ + +G LG A+QL DD+LD E+GK + D G
Sbjct: 189 GAMQANGNGGRQEDGREEALAGFGWQLGHAYQLRDDILDLTSTAEELGKPVNTDLAEGVY 248
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TLPVI A R + +++ E +A ++ + A+ +T+ A +Y +A
Sbjct: 249 TLPVIRAVSRDQGLARLL------GKELTQEEAARARGLVLASGAVEETQAVADAYVVRA 302
Query: 295 KDSLRCLPDSS-WKKSLMEVVDFCL 318
D L L D L L
Sbjct: 303 ADRLSTLTDHPRALDELKSYARTLL 327
>gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
Length = 285
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + KY + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 25 LAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLPAMD 84
Query: 89 ALRRGKVAARLV 100
+
Sbjct: 85 NDDYRRGQLTNH 96
>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
Length = 285
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + KY + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 25 LAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLPAMD 84
Query: 89 ALRRGKVAARLV 100
+
Sbjct: 85 NDDYRRGQLTNH 96
>gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
Length = 287
Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/315 (20%), Positives = 113/315 (35%), Gaps = 48/315 (15%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ + +R+ +++ + Y + GGK LR L L +A + + + A AIE
Sbjct: 15 QILNHMDRRLP-QADLLHQAMDYAL-RGGKMLRGFLVLESARLHDVPETAAIEAALAIEC 72
Query: 74 IHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----MVIETKSQ 127
IH +L+H +DD LRRG+ W T+VL GD L + AF + +
Sbjct: 73 IHAYSLVHDDLPAMDDDDLRRGQPTLHRKWDEATAVLAGDSLQTLAFELLARDSVGPNAL 132
Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
+ L+ A + + ++ T + + + A +
Sbjct: 133 SLIRTLAQAAGKDGMVSGQMMDIAAETAETPLTLDEITTLQARKTGCLIEWSACAGARLA 192
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ L+ Y LG+AFQ+ DD+LD G+ +GK + +D GK T
Sbjct: 193 GADPAPLRHYAQALGLAFQIADDILDVEGDAATVGKAVRKDADAGKATFV---------- 242
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
+ L ++RA A + P +
Sbjct: 243 ----------------------------SHLGLEGAKHRARELADLACAA--LAPYGAAG 272
Query: 308 KSLMEVVDFCLQRLN 322
+L + F + R +
Sbjct: 273 DTLKDAARFVISRDS 287
>gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10)
(Tm0161) From Thermotoga Maritima At 1.90 A Resolution
Length = 284
Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDS 88
+ + Y GG R+RP+L L L + + +A A+E HTA+L+HDD+ D++
Sbjct: 35 EEAMLYSATVGGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNA 94
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
RRG + +G ++L GD L AF + + E S A L GE +
Sbjct: 95 DFRRGXPSCHRTYGEDIALLAGDGLFFLAFSQISXIGNSXIFEEFSETAYXLLLGEAMDV 154
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
+ ++ + + + A + I + L G G+AFQ+
Sbjct: 155 EFERRXMEVSQEMVERMYAFXTGALFAFCFSAPFILXGXDHTXMXL--LGEXFGVAFQIY 212
Query: 209 DDVLDYRGEVNEMGKNIGEDFR 230
DD+ D G ++GK++G+D
Sbjct: 213 DDLXDILGSFEKVGKDLGKDTE 234
>gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Methylophilales bacterium HTCC2181]
gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Methylophilales bacterium HTCC2181]
Length = 296
Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
D ++ +V +Y + +GGKRLR +L A + + + LA A+E IH +L+HDD+
Sbjct: 29 DQSLLKNVCEYAVLNGGKRLRSLLIYAISNYSDGYDTHFNCLALAVEMIHAYSLVHDDLP 88
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---- 139
LRRGK + + + ++L GD L S AF ++ K + V
Sbjct: 89 SMDDDELRRGKPSCHIKYDEAQAILGGDALQSLAFELLSSDKFNVQDKVKIKVLNMLSQS 148
Query: 140 -----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+A G+ + + + A++ ++ + + + +
Sbjct: 149 IGLHGMALGQSIDIDSANKELNLKSLDHLQALKTGALIEASCVMSYVISDKYNQKHEKDI 208
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
S G +G +Q+ DD+LD+ + N +GK IG+D ++ K T ++ K + +
Sbjct: 209 ASIGKLIGSIYQITDDILDFESDTNTLGKTIGKDAKDKKATYITLMGVTEAKKIKALLFS 268
Query: 255 STINDGKISVENLKKAFIIM 274
+ + + +L ++
Sbjct: 269 TLRKEIEQFPSDLTVLNNLV 288
>gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796]
Length = 292
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 106/288 (36%), Gaps = 15/288 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
K++ LI + +I +++ GK R L + ++ D +++
Sbjct: 3 AKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQ 62
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
+E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V + ++E
Sbjct: 63 IVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEP 122
Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSL 182
L + L + + ++ +
Sbjct: 123 LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLME 182
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ +L + LGI +Q+ DD L+ + K ED GK + P++ A
Sbjct: 183 ALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHAL 242
Query: 243 QRGTKREKNFWKSTIND----GKISVENLKKAFIIMR-ENRALVDTEY 285
+ + + I + K I+ + +L T+
Sbjct: 243 NFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKK 290
>gi|121717308|ref|XP_001276070.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
gi|119404227|gb|EAW14644.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
Length = 718
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 91/288 (31%), Gaps = 11/288 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+I +YL K R + L+ + ++ ++ +H+A+L+ DD+
Sbjct: 412 SDTVILQPYRYLTSLPSKGFRDQAIDSINKWLKVPPKSVKMIKDVVKMLHSASLMLDDLE 471
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRGK + ++G +V + A + + ++ E L G+
Sbjct: 472 DNSPLRRGKPSTHSIYGMAQTVNSATYQYITATDITAQLQNSETFHIFVEELQQLHVGQS 531
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAV--LFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
L + N + + + V + + +G
Sbjct: 532 YDLYWTHNTLCPTIAEYLKMVDMKTGGLFRMLTRMMIAESPVVDKVPNSDMNLFSCLIGR 591
Query: 204 AFQLVDDVLD--YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI---- 257
FQ+ DD + G D TL +
Sbjct: 592 FFQIRDDYQNLASADYAKAKGFAEDLDEGKYSFTLIHCIQTLESKPELAGEMMQLRAFLM 651
Query: 258 ---NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
++GK+S E ++ + M++ +L T + + + L
Sbjct: 652 KRRHEGKLSQEAKQEVLVTMKKTESLQYTLSVLRELHSELEKEVENLE 699
>gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
Length = 288
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + I + + ++Y +F G R+RP L + A A
Sbjct: 6 RIEQALTDAIGMAAVAGCPPRLAEAMRYSVFPRGARVRPRLCHSVAAACGEDNPAATEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D + RRG+ + +G +VL GD L+ AF
Sbjct: 66 GAALELMHCASLVHDDLPCFDGADTRRGRPSVHKTFGEPLAVLTGDALIVLAFQ 119
>gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
Length = 288
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K ++D M I R+ + + D + Y GGKRLR L + +A +
Sbjct: 6 LKEIQDAVETAMAA---AIG-RLPAGD--LRDAMAYAAQ-GGKRLRAFLAIESAAIHGIS 58
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A A+E +H +L+HDD +D+ LRRG W + T+VL GD L + AF
Sbjct: 59 MAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAF 118
Query: 119 CMV 121
+
Sbjct: 119 ELC 121
>gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 377
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/332 (20%), Positives = 123/332 (37%), Gaps = 34/332 (10%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEY 59
+ + ++T ++ + + I + + D + + GGK LRP L
Sbjct: 21 VDRISEITRSELSSRRDHLAE-ISPETAQLADALLEYLD-GGKLLRPRFCFWGGVSALGR 78
Query: 60 RG-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT--------- 105
D AIE + A L+HDDV+D S +RRG+ A + +
Sbjct: 79 EPTEAEIDALARYGTAIELVQAAALMHDDVIDHSPVRRGRPALHVQAERRHRAEELAGSA 138
Query: 106 -------SVLVGDFLLSQAFCMVIETK---------SQEALEALSLVACTLAEGELRQLS 149
++++GD LS A + + +E + V L Q
Sbjct: 139 EDYGVAVAIVLGDLALSWAEQIASGVEGSPGAVAAAHREFDALRTEVMSGQFLDILHQAG 198
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
+ E+ L VI+ KT + + + G ++ + L ++ + +G AFQL
Sbjct: 199 GFSSAPDAEQAALSVIRWKTVPYTVLRPVRIGAALLGADHTALETLSAWAIEVGTAFQLR 258
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD+L G+ +E GK IG D GK T+ + + + + I S + +
Sbjct: 259 DDLLSVVGDQDETGKPIGGDIVEGKRTVLLARTWAAADAEGRALLERVIGRADASEQEIS 318
Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+MR + A+ + +D L
Sbjct: 319 AVHQLMRSSGAVGSVAREVRRRAGRGRDLLAE 350
>gi|260575019|ref|ZP_05843020.1| polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259022641|gb|EEW25936.1| polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 148
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
GIAFQ+ DD+L+ GE GK D GK T+ +I F+ ++ + +
Sbjct: 21 TGIAFQIQDDILNLIGETELYGKEALGDLLEGKRTVMMIHLFRGASEAVRRRMHAINARP 80
Query: 261 K--ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK----DSLRCLPDSSWKKSLMEVV 314
+ + ++ M+ ++ A + LR +P++ K L +V
Sbjct: 81 RTAKTDAMAQEMLRAMQRAGSIDYAIGLADRLANEGVRRFEADLRFIPETPGKAVLRQVS 140
Query: 315 DFCLQR 320
++ R
Sbjct: 141 NYVTTR 146
>gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
Length = 288
Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 9 LKDMEKVNFLILKRICSDVEMI-----PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ +++V + + + + + D + Y GGKRLR L + +A + +
Sbjct: 3 SERLKEVQDGVEAAMAAAIGRLPAGDLRDAMAYAAQ-GGKRLRAFLAIESAAIHGISMEQ 61
Query: 64 HVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ A A+E +H +L+HDD +D+ LRRG W T+VL GD L + AF +
Sbjct: 62 AMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHRKWDEATAVLAGDALQTLAFELC 121
>gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 295
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 87/233 (37%), Gaps = 9/233 (3%)
Query: 13 EKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
E+V I + + + Y + GG R+RP + L+ A+
Sbjct: 5 ERVEAAIAAAVGFGLGPDAPPRLAQALPYAVTPGGARIRPTILLSVAIACGDDRPGLSNA 64
Query: 68 ACAI-EFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A E IH A+L+HDD+ +RRGK + +VL GD L+ AF ++
Sbjct: 65 AAAALELIHCASLVHDDLPSFDDADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVLARA 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
L L+ + + +E + + + + + + A
Sbjct: 125 AEDAPGRGLGLIRTLAKRSGMPDGICAGQGWESEPTVNLSAYHR-SKTGALFIAATCMGA 183
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ G +G AFQ+ DD+ D + +GK G+D + +P+
Sbjct: 184 QAAGQEPEPWVELGSRIGEAFQVADDLRDALYDAETLGKPAGQDTVHARPSAV 236
>gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 289
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 67/295 (22%), Positives = 112/295 (37%), Gaps = 45/295 (15%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CAIEFIHTATLLHDD--VVD 86
+ +KY +F GG R+RP L LA + + AIE +H A+L+HDD D
Sbjct: 27 LGKALKYAVFPGGARIRPRLCLAVSQACGDKDPRVANACATAIELLHCASLVHDDLPCFD 86
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
++A RRGK + +G + ++LVGD L+ AF + ++ A E + + T+A
Sbjct: 87 NAATRRGKPSVHKEYGEEIALLVGDGLIVTAFE-TLARETLHAPEQTARLVATIANAVGS 145
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ E+ +++ A S S A + LG A+Q
Sbjct: 146 PYGIVAGQAWESEEKINITAYHRAKTASLFTGAVSAGALSSYGNPLDWYALADALGAAYQ 205
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD+ D + + MGK G+D NG+P
Sbjct: 206 VADDLYDAMDDTDSMGKPAGQDAENGRP-------------------------------- 233
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
++ E + + + A DS+ PD L ++ +RL
Sbjct: 234 -----NLVAELG-VQGALKKLQELVETAADSI---PDCEGADLLSAMIHKEAKRL 279
>gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
Length = 290
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 15 VNFLILKRICSDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + + ++Y GGKR+RP L T +L D A A+E
Sbjct: 8 FNKRFGEVLTQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALE 67
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH+ +L+HDD+ +D+ RRG++ +G +L+GD LL+ AF +++ +
Sbjct: 68 MIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMVRGSIGKVP 127
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---------AALEVSS 181
L L + + I KT + V+
Sbjct: 128 SEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVAC 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ R+AL+SYG +G+AFQ+ DD+LD G E+GK + D + K T P
Sbjct: 188 ILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGKAVKSDEKLNKSTYP 243
>gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 263
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---D 62
+ + D+++V I E + D +Y I GK LRP+L L + L+ R
Sbjct: 13 ERVVADLQEVGRDIK------PESLRDAARYYIEKPGKMLRPILLLTFSYSLDRRSLMDP 66
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A +E +H +LL DDV+D RRG R+++G++ +VL D+L++++
Sbjct: 67 RVLQAATIVELLHIVSLLQDDVMDKHDERRGAKTPRVIYGDERTVLASDWLIAES 121
>gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
Length = 341
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 106/275 (38%), Gaps = 17/275 (6%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A V
Sbjct: 54 GKRIRGCLVFLMNQTQEGKLEDALPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTVE 113
Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED- 160
G + +VL+GD + + A + E + +A +K +
Sbjct: 114 GPRRAVLLGDIMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQTKTRERRLHKL 173
Query: 161 -----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
Y H+I KT LF AA ++ ++ AG + ++G G A+Q+ DD+ D+
Sbjct: 174 LEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFI 233
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ KN+ + S + L+ +
Sbjct: 234 AWWTQPQKNLKTLSSLLP----------ALHYFCHKTGLTLPRHTFSSQKALQDWSQRI- 282
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
++ + E ++A+ + P++ + + L
Sbjct: 283 GHKFIYYMEQEINLRLKQAESYIEFFPNNPYTQIL 317
>gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMG 18311]
gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus CNRZ1066]
gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMG 18311]
gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus CNRZ1066]
Length = 290
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 12 MEKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
++K++ I + + Y + SGGKR+RP++ L +H
Sbjct: 4 LKKIDAAIRDFYQKKTPPVSSDLIIAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFD 63
Query: 67 LACAIEFIHTATLLHDDVVDDSA 89
+A ++E IHT +L+HDD+
Sbjct: 64 VAASLEMIHTGSLIHDDLPAMDN 86
>gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1]
gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1]
Length = 282
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I ++ KY++ GKR R L L N A A E +H+A+L DD+VD
Sbjct: 30 IMEMSKYIMKD-GKRFRGTLVFLFNDALGGEEKNAYQGALATEILHSASLALDDIVDYDL 88
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
RRG +A V+ N+ + V +FL+ A
Sbjct: 89 TRRGMASAWAVYTNRRVIFVSNFLIPTA 116
>gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
Length = 326
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + + K+ LIL + S E + +Y + +GGK +RP+L L+T LML
Sbjct: 24 LDQVRQWQTEHLPKLLDLILTQ-ASLPEPLNAACRYAMSNGGKHVRPLLALSTFLMLIQT 82
Query: 61 GDN-------------HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQT 105
GD+ A+E IH+ +L+HDD+ LRRG+ +V+G
Sbjct: 83 GDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDI 142
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALS--------LVACTLAEGELRQLSLSKNLDVT 157
++L GD L S AF ++ E + + + +N ++
Sbjct: 143 ALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLS 202
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
++ + + KT L AA+ + ++ A VQ LK Y +G+AFQ+ DDVLD +
Sbjct: 203 QDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITAD 262
Query: 218 VNEMGKNIGEDFRNGKPTLP 237
+GK G D + K T
Sbjct: 263 TITLGKPAGSDEKLEKSTYV 282
>gi|227495526|ref|ZP_03925842.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
15436]
gi|226831073|gb|EEH63456.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
15436]
Length = 361
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
GIAFQ+ DD + GE + GK + D GK T+ + L +R + +++ + + +
Sbjct: 239 WGIAFQMRDDEIGMFGEESVTGKPVSSDLAEGKRTILLSLVLERVSAQQRKVLLNALGNK 298
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319
+I+ + I+R+ A E Y + + L ++ + E +
Sbjct: 299 EITETEVALVREIIRDCGAYAVHEELIADYVNQGFAAFENLALHEKHQQIIREFAGLLVN 358
Query: 320 RL 321
R
Sbjct: 359 RK 360
>gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
Length = 296
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 16/241 (6%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV---L 66
E + K R+ + ++ +GGKR RP L LA E + +
Sbjct: 16 EAFEEYLHKAKPRLDTFHPFFEKAFWEMLENGGKRFRPKLFLAVLCAFEEKIETIHACFP 75
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC----- 119
+A A+E +HT +L+HDD +D++ RR + T+ LVGD L + AF
Sbjct: 76 IALALEVLHTYSLIHDDLPCMDNADTRRYHPTLHKSYDETTATLVGDGLNTYAFELLATN 135
Query: 120 ---MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
++ L + + L + L++ + + LH +K+ + S
Sbjct: 136 SLPDRLKISLITTLAQCGGIGGMVLGQALDCHFEHQTLNLQQLETLHTLKTAKLIAASLK 195
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + ++ + +L ++G+ LG+ FQ+ DD++D E GK+ D
Sbjct: 196 MGALIVCDSLETDISHSLFTFGLKLGLFFQVRDDIIDRTQSPEESGKSTQLDTFKNNYVN 255
Query: 237 P 237
Sbjct: 256 L 256
>gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel]
gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel]
Length = 290
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++ L K++ ++ S V + + + Y I + GK +R L +A +
Sbjct: 16 VEDFSCLVRKELVQIAST-KAECPSTV--LYEALSYTISNPGKCIRSFLASTSARVFGVS 72
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSAL 90
+ + L AIE +H +L+HDD+
Sbjct: 73 AERTLRLGAAIEAVHAYSLVHDDLPSMDNS 102
>gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
Length = 278
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 15 VNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACA 70
+ I K ++ + + ++ +GGKR RP L ++ DN A A
Sbjct: 1 MEEFIKKNLIKLNTFHPNFEKALNEMLLAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFA 60
Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
IE IHT +L+HDD+ LRRG + T++LVGD L + AF
Sbjct: 61 IELIHTYSLIHDDLPAMDDATLRRGHPTLHTTYDEATAILVGDGLNTYAFE 111
>gi|145613371|ref|XP_363775.2| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
gi|145020455|gb|EDK04584.1| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
Length = 702
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 85/278 (30%), Gaps = 18/278 (6%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I ++Y+ K R L + L+ ++ I +H ++LL DD+ DDS
Sbjct: 421 ISAPIRYIQSMPSKGFRAALVDCYNMWLDVPQREMEIIKTVINCLHDSSLLLDDIEDDSK 480
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG A LV+G ++ +L QA
Sbjct: 481 LRRGFPATHLVYGPAATINSATYLYVQALFFGQSLDLHWTFNRECPTKTQYFNMI----- 535
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ + +S +S +++ G+ FQ+ D
Sbjct: 536 ----------EQKTGAFLSLVAELMMVVSAASDYESSTDSPENIFQTFSYQSGLYFQVRD 585
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN---FWKSTINDGKISVEN 266
D L+ K ED K + ++ +K+ + + E
Sbjct: 586 DYLNITSADYADKKGFAEDLDEQKFSYILVHLAHSRPDLMVQVEGIFKAMRSGKTENAET 645
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
K ++ ++ A+ T+ + + L +
Sbjct: 646 KKYLVSLLHKSGAVEATKELLVRWQDDIVKEIDVLENH 683
>gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii]
Length = 287
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
+L + + Y + +GG R+R + L +L L ++ + LA A+E +H
Sbjct: 20 EEFLLSVVSGNQP-----AHYHLMTGGSRIRMRVCLDMSLCLGLNDEDAMRLASAVELLH 74
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
A+L+HDD+ D +LRRG+ A + +G ++ GD+L+++AF
Sbjct: 75 NASLIHDDIQDGDSLRRGQSAVWVKFGTNVAICTGDYLIARAF 117
>gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
Length = 291
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ + +++ I+ + + + + Y + +GGKR+RP+L L H
Sbjct: 4 EEKIRQIDQTIIDYYSKKAVSDSLVESILYSVQAGGKRIRPLLLLELVEAFGLPLQSAHF 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + + L L++
Sbjct: 64 QVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDPYGLIAV 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + + + + G+ + + ++ + KT L +
Sbjct: 124 AELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEG-CQLDLKELQAIHAHKTGKLLAFP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ L+ V+ V+ L+ G +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 183 FVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDVTASFEELGKTPQKDLVAAKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTIN-------DGKISVENLKKAFIIMRENR 278
P +L ++ + N + S E+L K +R
Sbjct: 243 PALLGLEKAKETLDQVLDQAQNLLKEIAQNRPFSGESLTKIIESLRLYD 291
>gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95]
gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95]
Length = 288
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 16/294 (5%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L+ L KD + I + + + + + Y I +GGKRLRP + ++
Sbjct: 1 MEFLKLLEFKDF--FDKKIKNFFENLDLEDYLKEPLFYYIENGGKRLRPWIIYNFGQIIS 58
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
N + +A A+E +H+++L+HDD+ D++ LRRG + L +G ++L GD+ +
Sbjct: 59 INKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRGALTTHLKFGEYKAILAGDYGFTL 118
Query: 117 AFCMVIETKSQEALE------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+V + + L +GE+ L K E + + SK
Sbjct: 119 PLQIVAGLDNIKEGNKLLLVDYFIKTILKLFQGEMEDLIFEKEDKNVGEKEILEMYSKKT 178
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
S + + + + + G + G++FQ+ DD+ D + ++GK +D
Sbjct: 179 GAVFGFCFASPFLMAGEAELAKEMNKIGTDFGVSFQIFDDLKDIFTKEEDIGKETNKD-- 236
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284
K TL FQ N + + + + NLK+ +++E R +++T
Sbjct: 237 VNKKTLLNFYNFQETQIIADNIYINVLQK--LEDLNLKELSQLLKEVRKIIETR 288
>gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica]
gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica]
Length = 327
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 8/293 (2%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
YL + G +R L A +++ + ++ + +H ++LL DDV D+S LRR
Sbjct: 23 PYNYLANNRGHNIREHLIAAFGAVIKVDKSDLETISHITKILHNSSLLVDDVEDNSMLRR 82
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G AA ++G ++ +++ A V++ KS +A+ + L G+ L +
Sbjct: 83 GLPAAHCLFGVPQTINSANYMYFVALQEVLKLKSYDAVSIFTEEMINLHRGQGMDLYWRE 142
Query: 153 N-LDVTEEDYLHVIKSKTAVLFSAALEVS---SLIAGVQNSVRQALKSYGMNLGIAFQLV 208
+E++YL ++ KT LF AL + + + L LG+ +Q++
Sbjct: 143 TLTCPSEDEYLEMVVHKTGGLFRLALRLMLSVASKQEDHEKINFDLTHLTDTLGVIYQIL 202
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD L+ + K ED GK + P+I + + + + + K
Sbjct: 203 DDYLNLQSTELTENKGFCEDISEGKFSFPLIHSIRTNPDN--HEILNILKQRTSDASLKK 260
Query: 269 KAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQ 319
A MR E ++ R + KA + L L ++ + +
Sbjct: 261 YAVDYMRTETKSFDYCLKRIQAMSLKASSYIDDLAAAGHDVSKLRAILHYFVS 313
>gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27]
gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27]
Length = 303
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
Length = 297
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 38/321 (11%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE------------Y 59
M+K++ + + + + Y K P+L +++ L
Sbjct: 1 MQKIDQYMHEFLSE--------LNY------K---PILIMSSKLQGGKKLRSKLLLKIAG 43
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
D + IE IH A+LLHDDV+D++ LRRG + +G + ++++GD L S+AF
Sbjct: 44 ESDISYKICAIIELIHAASLLHDDVIDEAKLRRGVKSINAQFGAKNAIMLGDILYSKAF- 102
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + +S L+ GEL ++LS+ + + YL +I +KTAVL A+
Sbjct: 103 YELSLIDLKLAKIISNAVVMLSVGELMDVNLSETFNTDKNAYLQMIYNKTAVLIEASARC 162
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+L+A + YG NLG+AFQ+VDD+LD +G+ +GK DF+ GK T
Sbjct: 163 GALLANLNED---DFAEYGKNLGLAFQIVDDILDIKGDEQTLGKPAMNDFKEGK-TTLAY 218
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + +SV+ L M+E+ +Y A +++
Sbjct: 219 MYLHEKLDSQDQKTLKSYYKKDLSVDELAWIKNKMQEHEIFNQVGQELNTYANNALKAIK 278
Query: 300 CLPDSSWKKSLMEVVDFCLQR 320
L +++ ++R
Sbjct: 279 KYNIKD----LEDIIKSMIER 295
>gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium
eBACmed86H08]
Length = 287
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M+ + KD+ K LK+ E+I + Y +F GGK++R + + +
Sbjct: 1 MEKKINKIGKDINKFLKNFLKK-QKRTELITS-MNYGLFPGGKKIRSKIIIDVGKIFSVP 58
Query: 61 GDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + + A+E IH +L+HDD +D+ LRRGK++ +G T+VL G+ LL+ AF
Sbjct: 59 YHHLIRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSLLTLAF 118
Query: 119 C 119
Sbjct: 119 E 119
>gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
Length = 290
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 15 VNFLILKRICSDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
N + + + ++Y GGKR+RP L T +L D A A+E
Sbjct: 8 FNKRFGEVLTQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALE 67
Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
IH+ +L+HDD+ +D+ RRG++ +G +L+GD LL+ AF ++I +
Sbjct: 68 MIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMIRGSMGKVA 127
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS---------AALEVSS 181
L L + + I KT + V+
Sbjct: 128 AEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVAC 187
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ R+AL+SYG +G+AFQ+ DD+LD G E+GK + D + K T P
Sbjct: 188 ILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGKALKSDEKLNKSTYP 243
>gi|313616875|gb|EFR89546.1| polyprenyl synthetase [Listeria innocua FSL S4-378]
Length = 75
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
KD+++V I I + + VK LI +GGK LRP L +A
Sbjct: 13 LSKDLQEVLQTIESNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAG 62
>gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger]
Length = 401
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 63/301 (20%), Positives = 104/301 (34%), Gaps = 9/301 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ + YL K +R + A L L + I +H ++LL DD+ D
Sbjct: 101 YKVLQQPINYLRSVPSKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDIQD 160
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG+ A V+G ++ L+QAF V+ L G+
Sbjct: 161 NSELRRGRPTAYRVFGVAQTINAATHALTQAFEKVVPLMKPGTSHGFFDELRNLHVGQAM 220
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSA---ALEVSSLIAGVQNSVRQALKSYGMNLGI 203
L +++ + L + + L ++LG
Sbjct: 221 DLHWTRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIKQTDLSDLMISLGQ 280
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKSTINDGK 261
FQ DD ++ + K +D GK +LP+I + +N + GK
Sbjct: 281 YFQARDDYINLASTKYQEQKGFAQDLDEGKLSLPLIHLLTQSPNAALIENIQQERARHGK 340
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV-DFCLQR 320
+S + + MR + L TE K L L SS + F L R
Sbjct: 341 LSADLKQLILDEMRNEKILQLTEETLNGLEAKVFRHLERLEVSSG---IKNFTFRFLLDR 397
Query: 321 L 321
L
Sbjct: 398 L 398
>gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1]
Length = 201
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
E ++ + L GEL Q+S + ++ YL + KTA LFS + +
Sbjct: 6 MNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYF 65
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
V++ K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q
Sbjct: 66 GHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQ 125
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ I++E + ++ + + + + A KA ++ LPD
Sbjct: 126 AAPDVFGPY---LDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPD 182
Query: 304 SSWK 307
+ K
Sbjct: 183 GTAK 186
>gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica]
Length = 349
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 22/285 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ ++Y + SGGK R M+ L +A ++ ++L A+E + T L+ DD++
Sbjct: 47 LEKSLEYNL-SGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDIM 105
Query: 86 DDSALRRGKVAARLV-----WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
D S RRG+ ++ + + + + +E
Sbjct: 106 DSSVTRRGRACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELFEWATIIT 165
Query: 141 AEGELRQLSLSKNLDVTEEDYLHV-----IKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
G+ + S+ V + +K KT+V S L+A Q+S LK
Sbjct: 166 EMGQTLDMQNSECAHVDLNHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQDSNCSQLK 225
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ +G FQ DD +D G GK + N L V K+ + +
Sbjct: 226 EITLQMGHYFQAQDDFIDCFGNPEVTGKIGTDIQDNKCSWLVVEALKYASQKQRQLIKDN 285
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+I VE +K+ + + L +Y Q++ D +
Sbjct: 286 YGKKNEICVERIKELYSELN----LETCFK---NYEQESLDQIND 323
>gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568]
gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568]
Length = 306
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81
+++ GGKRLRP L T M +N A A+E IH +L+H
Sbjct: 42 AMRHGALLGGKRLRPFLVYTTGQMFGVSLNNLDAPAAAVECIHAYSLIH 90
>gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC]
gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC]
Length = 293
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 96/288 (33%), Gaps = 28/288 (9%)
Query: 15 VNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ I + S + V+Y + SGGKR+RPML A L+ D + A AI
Sbjct: 14 IEAGIESSLEEFGSKGLSVRAPVEYALTSGGKRIRPMLVCMIAKGLDMSRD-VLDAALAI 72
Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAF----------- 118
EFIHT+TL+ DD+ RRG+ + +++L L+ A+
Sbjct: 73 EFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLK 132
Query: 119 ----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + + ++ + Q + E +I KT LF
Sbjct: 133 SQGVDPKEVDIAYDIISDVTDKNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKTGALFE 192
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
A L G + + G+ FQ+ DD+LD + G+++G ++
Sbjct: 193 IACVSGWLFGGGDPLCVPQIIEFSQTFGLLFQMKDDILDIHQD----GQDVGLNYALLFG 248
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+ K G L+ M
Sbjct: 249 LDAAKDLLNSSMDKCMILLKHLKQHGLKDTSELEMLIEYM---GIRDY 293
>gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1]
gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1]
Length = 303
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D+++LRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180]
gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180]
Length = 303
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D+++LRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + +++ + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDGTK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
Length = 364
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 111/311 (35%), Gaps = 28/311 (9%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALM----LEYRGDNHVLLACAIEFIHTATLLHDD 83
++ + +K+ + GGKR+RP L LA + E +A +E +H L+HDD
Sbjct: 49 PLVEEALKFTLE-GGKRIRPRLCLAAYRILTQRFEPPPAPVWNVAVVLEALHAFMLVHDD 107
Query: 84 VVDDSALRRGKVAARLVWGN-----------------QTSVLVGDFLLSQAFCMVIETKS 126
++D S RR + + + +L +A
Sbjct: 108 LMDQSLTRRDRPTLHERYREGLNVSARTAGDLGIVAGDWMFALAIRMLGRAGLQGTRLAR 167
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT-AVLFSAALEVSSLIAG 185
+ A L+ L + +TEED + + KT S L + + +A
Sbjct: 168 VVRIIAEMLIETGLGQSLDLLHDGRSLESITEEDITTLYRWKTARYTVSGPLVLGAALAN 227
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
+ R+ L +G LG +Q+ +D+ ++ + + T + A +
Sbjct: 228 APAATRRCLNRFGDLLGFGYQICNDLESLEDDLERGDHADLDTGKR---TYVLWTAHRVL 284
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ + + +E ++ ++ + A+ R + +A + L+ P +
Sbjct: 285 DPLGRAALAQALEAP-VGLERRRRLRDLIVRSGAVALCRQRVHDLRNEAVELLQEAPLTV 343
Query: 306 W-KKSLMEVVD 315
++ + +
Sbjct: 344 AQRQDFLALAQ 354
>gi|63103159|gb|AAY33485.1| farnesyl diphosphate synthase-like protein [Choristoneura
fumiferana]
Length = 397
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 59/346 (17%), Positives = 119/346 (34%), Gaps = 39/346 (11%)
Query: 9 LKDMEKVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E V IL I ++ E+ + V++Y + +GGK+ R + TL MLE
Sbjct: 59 KESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNL-AGGKKARGLTTLFAYEMLEK 117
Query: 60 RGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN--------- 103
+ L +E + ++ DD++D S RRG +
Sbjct: 118 PENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVNDSS 177
Query: 104 -QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
S + A + + E+L + + + + +
Sbjct: 178 LMFSSIFYVLHAHFADKKIYTNLVELFNESLMHTSIGQHLDVTMERRQKSDYSLFTIERY 237
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ I ++ L V + S Q + + +G FQ+ DD +D G+ +
Sbjct: 238 NAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGDES 297
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR--EN 277
GK + L V+ + ++ F + +E +K+ + ++ E
Sbjct: 298 LTGKMGTDIQEAKCSWLAVMALQRCSASQKIVFTTCYGSKEPAHIERIKELYKQLQLPEL 357
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL-MEVVDFCLQRLN 322
A +T S ++A LP S +L + ++ +R +
Sbjct: 358 YAQEETRMY-ESLIKQAH----GLP-SELSPALFVRLIHMIYKRNH 397
>gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
Length = 311
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 13 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 72
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 73 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 132
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 133 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 192
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 193 ISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 252
Query: 232 GKPTLP 237
Sbjct: 253 NSFVNL 258
>gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Paenibacillus polymyxa SC2]
gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)
[Paenibacillus polymyxa SC2]
Length = 795
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + D Y + GKR+RP+LT V L ++E++HTA+L+ DD+
Sbjct: 533 EQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDALAIVPLLRSLEYMHTASLIFDDLPS 592
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAFCMVIETKSQEALEALSLVACT 139
+ L + ++ L QA ++ AL S
Sbjct: 593 QDNASTRRGRQTLHQVHNSATAELTGLYLIQKAIGEQASLSQFNAETVLALIQYSARKAE 652
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
SK +T E + KT V F A L + +++A + S AL+ +
Sbjct: 653 DMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQTEESEIAALQKFAY 712
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++GIAFQ+ DD+LD G+ + +GK +G+D N IL ++ +K + +
Sbjct: 713 HMGIAFQIKDDLLDVEGDTHLLGKPVGQDSDNNNSNFVSILGYEGASKEMWGHYCLAMEA 772
Query: 260 GKISVENLKKAFIIMR 275
K N+ +M
Sbjct: 773 LKEVPRNISFLKHLMN 788
>gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
Length = 282
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ ++ V + + + + ++ KY++ GKR R L L N
Sbjct: 13 IIDEL--VEKFLKE---TREWEVMEMSKYIMRD-GKRFRGTLMFLFNGALGGEEKNAYPG 66
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A E +H+A+L DD+VD LRRG AA V+ N+ + V ++L+ A
Sbjct: 67 ALATEILHSASLALDDIVDYDELRRGMKAAWAVYTNRKVIFVSNYLIPTA 116
>gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
Length = 391
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/348 (19%), Positives = 120/348 (34%), Gaps = 39/348 (11%)
Query: 4 LEDLTLKDMEK---VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
LE++ + + V+ L + + V + + GGKRLR
Sbjct: 43 LEEVLEAGLRRARAVDPLFARDLADRVGAL-------VSRGGKRLRAAFAFCGWRAAGGT 95
Query: 61 GDNHVLLACAI--EFIHTATLLHDDVVD-----------DSALRRGKVAARLV-----WG 102
GD +L E + L+HDDV+D L RG AA + +G
Sbjct: 96 GDATAVLRTGAALELLQACALVHDDVMDGSLRRRGGPALHVELARGHWAAGMHGSAEAFG 155
Query: 103 NQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
++VL GD L+ A + T L T + ++ +
Sbjct: 156 TSSAVLAGDLALAWADDLLTETALGTPHGGRLHEEWRAMRTEMVAGQYRDLHAQAARSSG 215
Query: 159 EDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
D I + + L++ A ++ +AG + AL++ G G+AFQL DD+L G
Sbjct: 216 VDEALDIATLKSALYTVARPLALGGSLAGAGDRTLDALRAAGRCAGLAFQLRDDLLGAFG 275
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ GK G+D R+ K T + +A + + + S +++ M
Sbjct: 276 DPALTGKPAGDDLRSRKLTYLLAVALRLADAAGDHQAAATLAPDADSRSDRAVERMRTAM 335
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A E + + + E ++R +
Sbjct: 336 ERTGAREVVEAKIVELTAMSLRHFEGTGAPPAVR--REFA-ALVERAS 380
>gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75]
Length = 303
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 89/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG---- 61
+ E+ + + S + ++ +GGKR RP L LA ++ +
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSNQ 70
Query: 62 -DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ LRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESPIIVELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica]
Length = 349
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 22/285 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ ++Y + SGGK R M+ L +A ++ ++L A+E + T L+ DD++
Sbjct: 47 LEKSLEYNL-SGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDIM 105
Query: 86 DDSALRRGKVAARLV-----WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
D S RRG+ ++ + + + + +E
Sbjct: 106 DSSVTRRGRACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELFEWATIIT 165
Query: 141 AEGELRQLSLSKNLDVTEEDYLHV-----IKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
G+ + S+ V + +K KT+V S L+A Q+S LK
Sbjct: 166 EMGQTLDMQNSECAHVDLSHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQDSNCSQLK 225
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ +G FQ DD +D G GK + N L V K+ + +
Sbjct: 226 EITLQMGHYFQAQDDFIDCFGNPEVTGKIGTDIQDNKCSWLVVEALKYASQKQRQLIKDN 285
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
+I VE +K+ + + L +Y Q++ D +
Sbjct: 286 YGKKNEICVERIKELYSELN----LETCFK---NYEQESLDQIND 323
>gi|71390084|ref|XP_802181.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70858312|gb|EAN80735.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 173
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G +LGIAFQ+VDD LD G+ +GK D G TLPV+LA RE+
Sbjct: 53 FGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVLLA-----AREETQVYEA 107
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316
+ + + + + + + + A + ++ ++L L S + L +
Sbjct: 108 VRRRFKNPGDTEMCMEAVERHGCVAEALEHAGEHCRRGVEALHALHTSPARDCLEAAMGL 167
Query: 317 CLQRL 321
L R
Sbjct: 168 ILTRQ 172
>gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 307
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 69/345 (20%), Positives = 127/345 (36%), Gaps = 64/345 (18%)
Query: 2 KMLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLT-------- 50
E + LK + + + S I + Y + +GGKR+RP+
Sbjct: 3 NSFESILLKSKQVFDSFFESYTAKLFSPKTRITEACLYSLHAGGKRVRPIFVINSFFEPN 62
Query: 51 -LATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSV 107
L ++ + + L A A+E IHT +L+HDD+ +D+ RRGK + T++
Sbjct: 63 DLFSSEPFD-THQSVFLAALAVECIHTYSLIHDDLPAMDNDDTRRGKPTCHKQFDEATAI 121
Query: 108 LVGDFLLSQAFCMVIETKSQEA----------LEALSLVACTLAEGELRQLSLSKNLDVT 157
L GD L S +F ++ + + + + L + E + + + +
Sbjct: 122 LAGDTLNSLSFQLLSMMDANDPNLLRDSIQILHQGAGMTGMILGQMEDIEEEKNPSSNAR 181
Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + + KT L +++ + + + L Y +G+ FQ+ DD+LD G
Sbjct: 182 ESKLESIHEKKTGALITSSFLLGNRLRADWKEREFVLTRYAKEIGLLFQITDDILDVEGN 241
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ E+GK G+D + GK T P +
Sbjct: 242 LAELGKTPGKDAKAGKLTYPSLY------------------------------------- 264
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++ KA LP S + + + + +R N
Sbjct: 265 -GLEKSKLLRDQTLGKAISLAAELP-SLHNEFFLGLPKYIAERKN 307
>gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
Length = 301
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + KY + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 41 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMD 100
Query: 89 A 89
Sbjct: 101 N 101
>gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
Length = 301
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + KY + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 41 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMD 100
Query: 89 A 89
Sbjct: 101 N 101
>gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 285
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDS 88
+ + KY + +GGKR+RP+L L + H +A A+E IHT +L+HDD+
Sbjct: 25 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMD 84
Query: 89 A 89
Sbjct: 85 N 85
>gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
Length = 303
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHRLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + ++V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNASLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+ +G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 VSASLIMGLVASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQDEKESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
Length = 310
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 20 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 79
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 80 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 139
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 140 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 199
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 200 ISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 259
Query: 232 GKPTLP 237
Sbjct: 260 NSFVNL 265
>gi|63022077|gb|AAY26574.1| farnesyl diphosphate synthase-like protein [Choristoneura
fumiferana]
Length = 397
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 59/346 (17%), Positives = 121/346 (34%), Gaps = 39/346 (11%)
Query: 9 LKDMEKVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ E V IL I ++ E+ + V++Y + +GGK+ R + TL MLE
Sbjct: 59 KESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNL-AGGKKARGLTTLFAYEMLEK 117
Query: 60 RGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ L +E + ++ DD++D S RRG + + +
Sbjct: 118 PENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVNDSS 177
Query: 113 LLS----------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
L+ A + + E+L + + + + +
Sbjct: 178 LMFSSIFYVLRAHFADKKIYTNLVELFNESLMHTSIGQHLDVTMERRQKSDYSLFTIERY 237
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
+ I ++ L V + S Q + + +G FQ+ DD +D G+ +
Sbjct: 238 NAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGDES 297
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR--EN 277
GK + L V+ + ++ F + +E +K+ + ++ E
Sbjct: 298 LTGKMGTDIQEAKCSWLAVMALQRCSASQKIVFTTCYGSKEPAHIERIKELYKQLQLPEL 357
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL-MEVVDFCLQRLN 322
A +T S ++A LP S +L + ++ +R +
Sbjct: 358 YAQEETRMY-ESLIKQAH----GLP-SELSPALFVRLIHMIYKRNH 397
>gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
Length = 303
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|333022534|ref|ZP_08450598.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
Tu6071]
gi|332742386|gb|EGJ72827.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
Tu6071]
Length = 467
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 65/352 (18%), Positives = 113/352 (32%), Gaps = 52/352 (14%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS----------------GGKRLRPMLTLATAL- 55
V ++ + + + + + + + GG+RLR
Sbjct: 33 AAVAEVLERLLA---PRVAEAAR--LDASFGRQVAQWLAATTRGGGRRLRSAFVWWGLRV 87
Query: 56 MLEYRGD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR------------- 98
+ + A+E + + L+ DDV+D+S +RRG+ A
Sbjct: 88 ACPAPPPGTVAAALTVGAAVELLQSCALVQDDVMDNSPVRRGQPALHVLLGSTRAAAAGP 147
Query: 99 --LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
L +G +VL GD + A + + A ++ E+
Sbjct: 148 GALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLWSVLRTEMIAGQYLDLAGQ 207
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG------MNLGIAFQLVDD 210
+ + +TAVL S V+ + + G+AFQL DD
Sbjct: 208 ADASHSATHALRTAVLKSGRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAFQLRDD 267
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLP----VILAFQRGTKREKNFWKSTINDGKISVEN 266
+L G+ GK GED R GKPTL A R + +
Sbjct: 268 LLAVWGDPARTGKPTGEDIREGKPTLLAALGFSRAAARPRGAALAVLRRCYGNPAAGPAE 327
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVDFC 317
L ++ E A D E +A + LP++ + L+ +V
Sbjct: 328 LAAVREVLEETGARRDVEAHIARLVGRASAHVEALPEAPEARARLLALVRLA 379
>gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 288
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVV 85
+ + ++Y +F GG R+RP L +A AL A AIE +H A+L+HDD+
Sbjct: 24 PPRLAEAIRYAVFPGGHRIRPRLCVAVALACGDDDPAASDAAAGAIELLHCASLVHDDLP 83
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
RR K + +G +VL GD L+ AF
Sbjct: 84 CFDDAATRRQKPSVHAAFGVPLAVLTGDALIVAAFE 119
>gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
Length = 282
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 11/237 (4%)
Query: 12 MEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLL 67
ME+ + + S + ++ ++ GGKR RP L L +
Sbjct: 1 MEQFETFLGSHLPSAPSFHPHYENSLRQMLIGGGKRFRPALLLGVVRAYNPLLIQSAYHA 60
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE +HT +L+HDD+ LRRG + +++L GD L + AF ++
Sbjct: 61 ALAIELLHTYSLIHDDLPAMDNADLRRGIPTLHKTYDEVSAILAGDALNTYAFEVLSNAP 120
Query: 126 SQEALEALSLVACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ + + + G + E D + ++ AA
Sbjct: 121 FADRVIVKLIRSLAHNGGAEGMVLGQAIDCHFENFRLELDQVKMLHIHKTGKLIAAALQM 180
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ + Q L +G++LG+ FQ+ DD+LD + GK D
Sbjct: 181 GAFIVGRDDMAQELYDFGIDLGLLFQIQDDILDVTQNEIQAGKTTNNDQAKNSFVTL 237
>gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14]
gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14]
Length = 291
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+L+D K + ++ +E++ D GGKR+RP+LT+ +
Sbjct: 40 DVLKDFLEKRRKNCEP---SQMGGLIELLAD-----FMVGGKRIRPILTMLGWQAVTGEA 91
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GD V +A ++E H L+HDD++DDS RRG+
Sbjct: 92 AGDTVVQVAASLEMFHAFALIHDDIMDDSDTRRGRPTIHR 131
>gi|194884015|ref|XP_001976091.1| GG22668 [Drosophila erecta]
gi|190659278|gb|EDV56491.1| GG22668 [Drosophila erecta]
Length = 419
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 99/287 (34%), Gaps = 28/287 (9%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDD 83
++Y + GK+ R +LT+ T + L +E + + ++ DD
Sbjct: 115 AQALQYNVPR-GKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQSFFIISDD 173
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V+D+S RRG+ + + + ++ A +++ ++L+
Sbjct: 174 VMDNSITRRGQPCWHKLENVGMTAINDSLMIENAMYAILKKHFSHLDCYVALMELFHEIT 233
Query: 144 ELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQA 193
+ ++++ + I +S L + + +
Sbjct: 234 FITTCGQSLDLLHSNRSVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 293
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
K+ + +G FQ+ DD LD G GK + N L V+ + ++++
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353
Query: 254 KSTINDGKISVENLKKAFIIMRENR-----AL--VDTEYRAYSYGQK 293
GK +++ + +E A+ ++ ++ Q+
Sbjct: 354 DCY---GKKEPAKIERVKELYKELGLPSTYAIFEEESYNMIKTHIQQ 397
>gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 326
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 142/314 (45%), Gaps = 14/314 (4%)
Query: 8 TLKDMEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHV 65
+ +V I + S + +I + +GGKRLR LTLATAL L R D V
Sbjct: 17 VSAGLLRVEKRIHRLSTSSRLPLINGAAGRITGAGGKRLRAALTLATALALGGRIDNRVV 76
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A +E IH +L+HDD++D +A RRG G+ +++VGDF+L++A +
Sbjct: 77 TAAACVELIHAGSLVHDDLMDKAAERRGVRTLNAELGDARALVVGDFMLARAGLAALSVV 136
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
S+ L+ V LAEG+ ++++ + T ED L I KTA LF A+ V+
Sbjct: 137 SKPVARTLASVVVELAEGQFQEVAELFDPGRTPEDALRSITGKTAALFRASCLVAHPDGR 196
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
YG G+ FQ++DD+LD +GK +G D R G TLP++LA Q
Sbjct: 197 SM-------AEYGERFGVLFQILDDLLDLASTAERLGKPVGNDIRQGVYTLPLLLALQHD 249
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
+ ++S + + +R R + DT A SL + D
Sbjct: 250 HGDLRPLL-----GRRLSEDEITALLTRLRGGRMVDDTLEYCRGLASDALSSLPVIADPE 304
Query: 306 WKKSLMEVVDFCLQ 319
+L + C+
Sbjct: 305 IAAALYGLPAACID 318
>gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
Length = 291
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 23/287 (8%)
Query: 9 LKDMEKVNFLILK-----RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
+ + V I K ++ S + + V Y + +GGKR+RP L L L+
Sbjct: 4 QEKLTLVESAIEKFYGDKQVSSS---LREAVLYSVHAGGKRIRPYLLLEVLESLQVPITI 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFL 113
H +A A+E IHT +L+HDD+ + L
Sbjct: 61 AHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDPYAL 120
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
++QA A +LS + + G++ + + E+ + +KT L
Sbjct: 121 IAQADLPNEIKIDLIASLSLSSGSMGMVAGQVLDMEGEG-KHLNLEELQTIHANKTGKLL 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D + K
Sbjct: 180 AYPFQAAAIIAELTPELQAKLKTVGELVGLAFQVRDDVLDVTASFEEIGKTPQKDLKAEK 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVE----NLKKAFIIMRE 276
T P +L + + + + + I+
Sbjct: 240 STYPALLGLDEAKEFCNQTLDQANIKLEEIAQQVNFDKEPIVKIVES 286
>gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2150]
gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2150]
Length = 287
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 66/329 (20%), Positives = 117/329 (35%), Gaps = 54/329 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ L ++ V + + + + +GGKRLR L L A +
Sbjct: 6 LSDAATLVQARLDAVIADFGDF------PVAAAMAHAV-TGGKRLRGFLVLEGASLHGVA 58
Query: 61 GDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++ + A A+E +H +L+H +DD LRRG+ + W T+VL GD L + AF
Sbjct: 59 ANDALNAAAAVEALHAYSLVHDDLPCMDDDDLRRGQPTVHVKWDYATAVLAGDALQTLAF 118
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLF 173
++ +T + + +A G + ++ T D + +
Sbjct: 119 DLLADTPVSADRQISLIKGMAVASGAAGMVLGQAMDIAAETAETPLDLNAITLLQANKTG 178
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + + + Y LG+AFQ+ DD+LD G+ + GK + +D GK
Sbjct: 179 ALIRWSAEAGPILAGDDPTPMCDYATALGLAFQIADDILDIEGDAAKAGKKLQKDAAAGK 238
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T +L L + RA +
Sbjct: 239 ATFVSLL--------------------------------------GLDGAKARARELVTQ 260
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+D+L P S L + F + R +
Sbjct: 261 AEDALA--PYGSSADVLRQTARFVIDRES 287
>gi|47097440|ref|ZP_00234987.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes str. 1/2a F6854]
gi|47014195|gb|EAL05181.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes str. 1/2a F6854]
Length = 115
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+AFQ+ DDVLD+ G E+GK GED R G TLPV + + + +
Sbjct: 1 MAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPV----FFAMEDPFLKKRISQITEET 56
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
E + +++ A E A +Y +KA + L LP K L ++V +R
Sbjct: 57 PAEEIAVLVEEVKKTGA-KQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKR 113
>gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150]
gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150]
Length = 290
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 14 KVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67
K++ I + E+I + Y + GGKR+RP++ L D+H +
Sbjct: 6 KIDAAIRDYYQKKNLPVSHELIS-AILYSVDGGGKRIRPLIFLDLLEGFGLELTDSHFDV 64
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
A ++E IHT +L+HDD+ +
Sbjct: 65 AASLEMIHTGSLIHDDLPAMDNDDYRRGCLTNH 97
>gi|125810640|ref|XP_001361556.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
gi|195153687|ref|XP_002017755.1| GL17346 [Drosophila persimilis]
gi|54636732|gb|EAL26135.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
gi|194113551|gb|EDW35594.1| GL17346 [Drosophila persimilis]
Length = 419
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 27/276 (9%)
Query: 42 GKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +LT+ T + L +E + + ++ DDV+D+S RRG+
Sbjct: 125 GKKNRGILTVLTYKNLVPAEDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQ 184
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLVACTLAEGELRQ 147
V + + ++ A +++ + T L Q
Sbjct: 185 PCWHKVENVGLTAINDALMIENAMYAILKMHFSHLDCYVALMELFHEITYITTCGQSLDQ 244
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
L+ +++ + I +S L + + + K+ + +G
Sbjct: 245 LNSHRSVSEFTMENYKAIVDNKTAYYSFYLPFAVALHLAGYKDAEAFRQSKTILLEMGHF 304
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G GK + N L V+ + +++K G
Sbjct: 305 FQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANAEQKKIMVDCY---GNNDP 361
Query: 265 ENLKKAFIIMRENR-------ALVDTEYRAYSYGQK 293
+++ + +E ++ ++ Q+
Sbjct: 362 VKVERVKELYKEIGLPTTFATFEEESYNMIKTHIQQ 397
>gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
Length = 352
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/345 (15%), Positives = 114/345 (33%), Gaps = 47/345 (13%)
Query: 5 EDLTLKDMEK---VNFL--ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-- 57
+LT + V+ + + K + +V GGKR R + +ATA +L
Sbjct: 26 TELTEDGLANDQTVDAIQWMKKSLECNVP------------GGKRNRGLSVIATARLLVA 73
Query: 58 -----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+ ++L +EF+ L+ DD++DDS RRG+ T + F
Sbjct: 74 PQELSDEDIKGALILGWCVEFLQAFFLVADDIMDDSVTRRGQPCWFRNPEIGTIAINDSF 133
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------------LSLSKNLDVTEED 160
++ +++ + L+ + +
Sbjct: 134 MIESCIYKLLKKYFRSQPYYADLLDLMHETTYDTEVGQTLDLITAPSYVDFSRFSIERYR 193
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ K+ + ++ Q + M +G FQ+ DD LD G+
Sbjct: 194 AIVKYKTAIYSFYLPVALAMTMTKNNSEVDYQDARQVLMQMGEYFQIQDDFLDCFGDPKI 253
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK + N L V +++K + + +++V+ +K + +
Sbjct: 254 TGKIGTDIEDNKCSWLVVQALSIASEEQKKVLQDNYAKNDQVAVQKVKDLYNELN----- 308
Query: 281 VDTEYRAYSYGQKAKDSL----RCLPDSSWKKSLMEVVDFCLQRL 321
+ R Y +++ +L + + K+L +R
Sbjct: 309 --LKQRYNDYEEQSYTTLSEGINKIANQDLAKALHVFAKRIYKRK 351
>gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp.
HF0500_35F13]
Length = 563
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 61/313 (19%), Positives = 116/313 (37%), Gaps = 24/313 (7%)
Query: 31 PDVVKY-LIFSGGKRLRPMLTLATALMLEYR--------------GDNHVLLACAIEFIH 75
+ V Y + GGK RP +TLA L D+ A +IE H
Sbjct: 229 TEAVAYDFLSKGGKHSRPFITLAVYDALTGGQATMAEGATFLAELPDSIRRTAMSIETFH 288
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
A+L+HDD+ DD R G +G T++ VGD+L+ + V Q A +
Sbjct: 289 KASLVHDDIEDDDDFRYGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAAD 348
Query: 136 VACTLAEGELR---------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
+ LA R + + + D L + KTA F AA+ +A
Sbjct: 349 ILDMLARAHTRLSEGQGAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLART 408
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ + ++ + NLG+AFQ+++D+ D++G+ + + L +
Sbjct: 409 VAEIEEPVRGFARNLGVAFQILNDLGDWKGDADNKMAAGLDALGGRPTLLLALALEALDE 468
Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
+ ++ + +++ + + + Q+A+ +
Sbjct: 469 QDQQLLLTLMDEESGDQASRIQQVQQLYNKAGVFDKALLLVDKHQQRAEAIADDIQPEDL 528
Query: 307 KKSLMEVVDFCLQ 319
++ +VD L+
Sbjct: 529 RRLFYYLVDTVLE 541
>gi|58699201|ref|ZP_00374011.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534279|gb|EAL58468.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 69
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
+VN L+ + S+ ++I ++Y++ + K +R L +A++ + + +A AIEF
Sbjct: 13 EVNKLLPE--NSENKLIS-AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
>gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8]
gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8]
Length = 303
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
Length = 291
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 21/285 (7%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHIAIKPAHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + L L++Q
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYVLIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + +L+ + + G++ + ++ E+ + +KT L +
Sbjct: 124 ADLPSQIKVDLISNLSLASGSLGMVAGQVLDMEGEH-QHLSLEELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + ++ LK G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAAIIAELAPEMQVKLKIVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM-RENRAL 280
P +L + S L++ + E ++
Sbjct: 243 PALLGLEEAIAFCNQTL-------DQSNAKLEEIAQQIPFETGSI 280
>gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
Length = 290
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 9/235 (3%)
Query: 14 KVNFLILKRI---CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLL 67
++ I I +V + ++Y + GG R+RP + L+ AL +
Sbjct: 6 RIEHAISAAITQAQGNVAPTKLASALEYSVTPGGARIRPTICLSVALACGDPQPAMADAA 65
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A AIE IH A+L+HDD DD+ +RRGK + + ++L GD L+ +F ++
Sbjct: 66 ATAIELIHCASLVHDDMPCFDDADVRRGKPSVHKAYSEPLALLAGDSLIIASFEVLTRVA 125
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ L A+ L+ + + +E+ + A + + + A
Sbjct: 126 HHDPLRAIELMKILGQSTGMPGGICAGQGWESEDKIDLSAYHR-AKTGALFTAATRMGAA 184
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ G +G AFQ+ DD+ D + +GK +D + +P
Sbjct: 185 AAGEDPEPWTELGARIGEAFQVADDLRDALYDEATLGKPAHQDEIHDRPNAVTEF 239
>gi|194752870|ref|XP_001958742.1| GF12410 [Drosophila ananassae]
gi|190620040|gb|EDV35564.1| GF12410 [Drosophila ananassae]
Length = 417
Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 96/276 (34%), Gaps = 27/276 (9%)
Query: 42 GKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +LT+ T + L +E + + ++ DDV+D+S RRG+
Sbjct: 123 GKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQ 182
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LSLVACTLAEGELRQ 147
+ V G + + ++ A +++ + T L Q
Sbjct: 183 LCWHKVEGVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQ 242
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
L+ ++N+ + I ++ L + + + K+ + +G
Sbjct: 243 LNSNRNVSEFTMENYKAIVENKTAYYTFYLPFAVALHLAGYKDAEAFRQSKTILLEMGNF 302
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G GK + N L V+ + ++++ GK
Sbjct: 303 FQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANAEQKQIMVDCY---GKEDP 359
Query: 265 ENLKKAFIIMRENR-------ALVDTEYRAYSYGQK 293
+++ + +E ++ ++ Q+
Sbjct: 360 AKVERVKELYKELGLPSTYATFEEESYNMIKTHIQQ 395
>gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas
acidaminovorans]
gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas
acidaminovorans]
Length = 303
Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 113/288 (39%), Gaps = 15/288 (5%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59
L+ E ++ + + + + + + + GGKR RP+L L+ ML
Sbjct: 13 LQKYFESRFELIDQELKNALTFEDKYATELKKAIYEAVIPGGKRWRPLLLLSMFEMLTGF 72
Query: 60 ----RGDNHVLLACAIEFIHTATLLHDDVVD--DSALRRGKVAARLVWGNQTSVLVGDFL 113
+ + + AIE +H ++HDD+ + RRG+ A + +GN ++L D L
Sbjct: 73 KKHRTFPDALKSSVAIELLHNGAIVHDDLPSVMNRTQRRGQPALHIKYGNAIAILAADAL 132
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSK 168
S A+ ++ E K+ E + + S++ + ++ K
Sbjct: 133 YSLAYEIISELKNPEQSLEAIRILSNATKSYGMIGGQVVALSSRHKVMKINTLNYIDMKK 192
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
L A+ +++ L++ Q +++Y +NLGIA+Q+++D+ +E
Sbjct: 193 VGSLLQASADIACLLSRADEETHQVMRAYALNLGIAYQMIEDIEADYSRGSEGLDEEYVP 252
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
T + R T + + + L + +++E
Sbjct: 253 VSKASYTALLGFDKARKTVENMLADSAKMLKPYPNNSVLLEFVAMIKE 300
>gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 279
Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 3/259 (1%)
Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
L + DVV Y +GGKRLR L + + +N + A+E H+
Sbjct: 15 KNFLDELHISKPF-KDVVSYTPLAGGKRLRAYLIWELSRYTGFGEENALKAGIAVELFHS 73
Query: 77 ATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
+L+HDD+ D+ +RRG ++ + +G ++L GDFL+ + +
Sbjct: 74 GSLIHDDLPAIDNDTIRRGLPSSHIKFGESKAILAGDFLMLFPGRVFSSLDLETRYIHPI 133
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
L ++ + E ++ + +
Sbjct: 134 LELWQETSLKVVEGEFDDVFPEDESREQMERIHAAKTGALFGFCFAAPFIREKREKIDEM 193
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
G+ G +Q++DD+ D +E+GK G+D + K T+ + + K +
Sbjct: 194 YKLGVRFGKLYQMMDDIKDVISTESELGKTPGKDGKQNKLTILSFESLEEAQIEVKESFH 253
Query: 255 STINDGKISVENLKKAFII 273
S + + + K+ I
Sbjct: 254 SILGEIDSFTDLKKEMRDI 272
>gi|296387400|ref|ZP_06876899.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
Length = 87
Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A A +L P S+ L ++ + ++R N
Sbjct: 46 GLEAAKGYALELRDLALAALDGFPPSA--DPLRQLARYIVERRN 87
>gi|195402409|ref|XP_002059798.1| GJ15042 [Drosophila virilis]
gi|194140664|gb|EDW57135.1| GJ15042 [Drosophila virilis]
Length = 415
Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 94/273 (34%), Gaps = 21/273 (7%)
Query: 42 GKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +LT+ T + L +E + + ++ DDV+D+S RRG+
Sbjct: 121 GKKNRGILTVLTYKNLVPAEELTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQ 180
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL------ 148
V + + ++ A +++ ++L+ +
Sbjct: 181 KCWHKVENVGLTAINDALMIENAMYAILKQHFSHLDCYVALMELFHEIAYITTCGQSLDL 240
Query: 149 -SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
+ K + + I +S L + + + K+ + +G
Sbjct: 241 LNSHKRVSEFTMENYKAIVDNKTAYYSFYLPFALAMHLAGYKDAEAFRQSKTILLEMGHF 300
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G GK + N L V+ + ++ + + + V
Sbjct: 301 FQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANAEQRQIMIDCYGQNDPLKV 360
Query: 265 ENLKKAFIIMR--ENRAL--VDTEYRAYSYGQK 293
E +K+ + + A+ ++ ++ Q+
Sbjct: 361 ERVKELYKELSLPSTYAIFEEESYNMIKTHIQQ 393
>gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 367
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 106/307 (34%), Gaps = 27/307 (8%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK +R L D A ++E +H L+ DDV+DDSA RRG +
Sbjct: 60 GKFVRSTFAYLGWLCGRPESDAAARAAASLELLHAFALIQDDVMDDSATRRGSATVHVQL 119
Query: 102 GNQTSVLVG---------------DFLLSQAFCMVIETKSQEAL-----EALSLVACTLA 141
+ D L A M+ E+ L+ LA
Sbjct: 120 AHWAERQRRPVGAQFGRSAAVLLSDLCLVWAERMLRESGLPAESLAKALPVYDLLRSELA 179
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMN 200
G+ L + + L + + K+ +A + AL+ YG
Sbjct: 180 VGQFSDLLNENSAAPSLNAVLDIARRKSGNYTVLRPLELGAVAAGCSPQVLAALRQYGTA 239
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G AFQL DD+L G+ GK +G+D K T V+ A + E+ +
Sbjct: 240 IGEAFQLRDDLLGVFGDPLVTGKPLGDDLYQAKATTIVVAAGELAGDTERRELRRLTAGR 299
Query: 261 KI----SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVV 314
+ ++ ++ + A E + A +L P S+ + +L +
Sbjct: 300 PLPGVIDERWIQAWQRLIVDTGADELVEKMIAERVEAAVTTLADEPGVPSAPRAALTVLA 359
Query: 315 DFCLQRL 321
D C QR
Sbjct: 360 DRCTQRT 366
>gi|153791944|ref|NP_001093302.1| farnesyl diphosphate synthase 3 [Bombyx mori]
gi|146424710|dbj|BAF62115.1| farnesyl diphosphate synthase 3 [Bombyx mori]
Length = 385
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 98/313 (31%), Gaps = 26/313 (8%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHTATLLHD 82
+ V++Y + GGK++R + T+ + E + + E + +++D
Sbjct: 77 VKKVLEYNVK-GGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 135
Query: 83 DVVDDSALRRGKVAARLVWGNQ-TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
D++D S+ RRG + ++ + + ++ + A L A
Sbjct: 136 DIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEA 195
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL------------IAGVQNS 189
+ + + + S QN+
Sbjct: 196 LLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRQNA 255
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ ++ +G FQ+ DD +D G GK + L V + +
Sbjct: 256 PIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQEGKCSWLAVNALQRCDEAQR 315
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK-DSLRCLPDSSWKK 308
K F ++ + V ++K+ + ++ L + LP S+
Sbjct: 316 KLFAQNYASKNTDDVASIKRLYEDLQ----LPKLYKEQEDEIHSGILKKINALPSSTSPA 371
Query: 309 SLMEVVDFCLQRL 321
+++D +R
Sbjct: 372 IFFKLLDMIFKRS 384
>gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
Length = 288
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 83/238 (34%), Gaps = 12/238 (5%)
Query: 12 MEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67
+ ++ + + S + ++ SGGKR RP L L+ + +
Sbjct: 9 FSEFESYLISQSPKVPSFHPYYEKALWEMVLSGGKRFRPKLLLSVVYANKAKFASKAFAP 68
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-------VGDFLLSQAFCM 120
A A+E +HT +L+HDD+ + L A
Sbjct: 69 ALALEILHTYSLIHDDLPAMDNALLRRGVPTLHHKYDECGAILVGDGLNTHSFYCIAKSK 128
Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEV 179
+ + +E LS + L + L I +KTA L +AAL++
Sbjct: 129 LKPKIKNKLIEILSYNGGIHGMVLGQALDCYFEKQTLPLEKLRTIHLNKTAKLIAAALQM 188
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+IA Q L G++LG+ FQ+ DD++D E GK D
Sbjct: 189 GGIIAKCDKKFCQKLYKIGLDLGLFFQIRDDIIDATQSSQEAGKTTQNDSEKNSYVNL 246
>gi|289740703|gb|ADD19099.1| farnesyl pyrophosphate synthase [Glossina morsitans morsitans]
Length = 425
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 19/264 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDV 84
+ V++Y I GK+ R +LT+ T L +L +E + +L+DD+
Sbjct: 122 LKKVLEYNILH-GKKFRALLTILTYKNLVKDVTAENLKLAQILGWCLELLQCFLVLNDDI 180
Query: 85 VDDSALRRGKVAARL-------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
+D+S RRG+ + + V G ++L + + ++ +
Sbjct: 181 MDNSTTRRGQTCWHRLDNVGLIAFNDSIMVESGIYVLLKKYFSHLDCYVDLMHMFHEMTF 240
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR---QAL 194
T L L+ +K++ + I + ++ +++ + +
Sbjct: 241 ITTCGQSLDMLNSNKSVSTFTMNTHKAIAANKTSHYTFYFPIAAAMHLAGLKDAEALRQT 300
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
K M +G FQ+ DD LD G+ GK + N L V+ + +++ +
Sbjct: 301 KMIAMEIGHFFQVQDDFLDCFGKPEVTGKLGTDIQDNKCSWLAVVCMQRANDEQKAVMLE 360
Query: 255 STINDGKISVENLKKAFIIMRENR 278
GK + + +
Sbjct: 361 CY---GKTEPGKAARVKELYKTLG 381
>gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1]
gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter
aurescens TC1]
Length = 369
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 64/321 (19%), Positives = 107/321 (33%), Gaps = 43/321 (13%)
Query: 41 GGKRLRPMLTLATALMLEYRG-------DNHVLLACAIEFIHTATLLHDDVVDDSALRR- 92
GGK +RP+L + T L G + + +A AIE +H A LLHDDV+D +RR
Sbjct: 53 GGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLVRRG 112
Query: 93 ------------------------------GKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ + ++A
Sbjct: 113 HPNLIGSLLAEAGETARTDGADGARAGSGLHWAQTGGILMGDMLLAATHQAFARAELPHE 172
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
L ++ E L + + F L ++
Sbjct: 173 LRLRLLDLLEHTINETVAGEQLDVGLGDGIIAPDLQTILMMCGYKTATYTFELPLRAAAT 232
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG +V AL + G +LG+AFQL DD+L G+ GK+ D R GK T + A
Sbjct: 233 LAGADFAVENALATAGRHLGLAFQLQDDLLSTFGDPRRHGKDPFSDLREGKETAIIAHAR 292
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCL 301
+ ++SV + + + + A V + Q + L +
Sbjct: 293 TT---TVWPDIEPFFGRPELSVGDGEHVRRHLSDCGAEVFVQGLIEEQLQAFNNQLTSTI 349
Query: 302 PDSSWKKSLMEVVDFCLQRLN 322
P S + L+++ R +
Sbjct: 350 PAS-VRNVLLDLAGQLEGRQS 369
>gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
98-5489]
gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
98-5489]
Length = 288
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 12/246 (4%)
Query: 4 LEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + ++ + + S + ++ +GGKR RP L L+ + +
Sbjct: 1 MRKNLQSIFGEFETYLISQAPKVPSFHPYFEKALWEMVENGGKRFRPKLLLSIVDAYKPK 60
Query: 61 G-DNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E +HT +L+HDD+ LRRG + ++L+GD L + +
Sbjct: 61 SIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTLHCKYDECGAILIGDALNTHS 120
Query: 118 FCMV------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F + + K++ + + +D + +KTA
Sbjct: 121 FYCIATSKLKPKIKNKLIKILSYNGGIYGMVLGQALDCYFEKQTLPLKDLRTIHLNKTAK 180
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +A+L++ +IA + + L G++LG+ FQ+ DD++D E GK D +
Sbjct: 181 LIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRDDIIDATQSSKEAGKTTHNDLQK 240
Query: 232 GKPTLP 237
Sbjct: 241 NSYVNL 246
>gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 243
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 11/232 (4%)
Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
ME+++ ++ + + S + + ++ + S GK+LR L L A + L+
Sbjct: 1 MERIDDILKEFVDSLNYPLASEMFSQV--SSGKKLRSKLILKIAGA----SEASFKLSSV 54
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+E IH A++LHDDV+DDS +RRGK + ++G + S+++GD L S+ F I +
Sbjct: 55 VEIIHLASVLHDDVIDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGF-NEIVKFDMKIA 113
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ +S C L+ GEL + L + + +E YL +I K + A +
Sbjct: 114 DIISDAVCKLSIGELMDVELGSSFNADKEKYLKMIYFK---TAVLIEAAAKSAAILAGFD 170
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
Q YG NLG+AFQ+VDD+LD + +GK DF+ GK TLP I +
Sbjct: 171 EQKYGDYGKNLGLAFQIVDDILDITSDEKTLGKPAMNDFKEGKTTLPYIYLY 222
>gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
Length = 728
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 97/291 (33%), Gaps = 16/291 (5%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + +Y+ K +R L L LE + + I+ +H ++L+ DD+ D
Sbjct: 419 APVFEPARYIRQMPSKNMRSQLMDCFNLWLEVPQPSLAAIKETIDCLHHSSLILDDIEDG 478
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS----LVACTLAEG 143
S LRRG AA +V+G ++ L QA + S+E + L G
Sbjct: 479 SDLRRGLPAAHIVYGVGQAINSATHLHVQAVANMHAMASREGRPQMMDVFLHHLNQLFIG 538
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV------RQALKSY 197
+ L + + E+ + + L A + L +
Sbjct: 539 QSWDLHWTFHRRCPTEEKYLNMIDQKTGAMLQMLLELMQTAAAAAKQGVLKDGKHLLWEF 598
Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW--KS 255
G FQ+ DD ++ E K D K + ++ F+ + +
Sbjct: 599 TRLFGRFFQVRDDYMNTLSTEYERQKGFASDLNEQKLSYMLVHMFEVYPETRDKVEGVFN 658
Query: 256 TINDGKISVENLK----KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
T+ G +S + +M E T + + +S+ L
Sbjct: 659 TMRRGGVSEGAVDVAKTYILSMMEETGTNNFTYKLLQKWHGQVLESIGALE 709
>gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR51-B]
gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR51-B]
Length = 292
Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/298 (18%), Positives = 101/298 (33%), Gaps = 45/298 (15%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVV 85
+ + + Y +F GG R+RP L +A A ACAIE +H A+L+HDD+
Sbjct: 25 PPQLANALHYAVFPGGARVRPQLCMAVAAANTGKDPSLAKSAACAIELLHCASLVHDDLP 84
Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+RRGK + +G + +VL GD L+ AF ++ + +
Sbjct: 85 CFDDATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATARYPDRGPAVMGYVAD 144
Query: 144 ELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ E + + + + + + A ++ G ++G
Sbjct: 145 GVAAPCGIAAGQAWECEQRVDLALYHQSKTGALFIAATCAGAAAAGVDPTPWRNLGASIG 204
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
A+Q+ DD+ D ++ +GK G D +P+
Sbjct: 205 EAYQVADDIKDATSDIETIGKPTGIDIALDRPS--------------------------- 237
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
A + + A+ L +P + L ++V QR
Sbjct: 238 -------AVRELGVDGAVQRLRQCME-------AGLDAIPQCDGRAQLQQLVRLQSQR 281
>gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
Length = 290
Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 19/291 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ KD N + + I + ++Y +F GGK++R + + + +
Sbjct: 1 MQNKLARIAKD---TNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A+E IH +L+HDD +DD +RRGK++ + +G T+VL G+ LL+ A
Sbjct: 58 NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117
Query: 118 FC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F + + +A G+ LS K + I K
Sbjct: 118 FEILVSSSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEI-KK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T LFS V +I N+ + ++ G N+G+ FQ+ DD++D++G GK G+D
Sbjct: 177 TGKLFSFCCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKGSTVIAGKLTGKD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI---SVENLKKAFIIMRE 276
+ GK TL +L +Q K I D + +L + + +
Sbjct: 237 KKKGKATLISLLGYQNAIKYADKIKSKIIKDLNKYSSNTNSLNETLDYILK 287
>gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium]
Length = 313
Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 5/225 (2%)
Query: 18 LILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIH 75
I + ++ + Y +F GG R+RP L LA AL A A E +H
Sbjct: 36 AIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLH 95
Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
A+L+HDD+ RRGK + +G + +VL GD L+ AF + E S
Sbjct: 96 CASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVR 155
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + E + + A + + + A +
Sbjct: 156 MAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPSE 215
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ G ++G A+Q+ DD+ D + +GK G D +P+
Sbjct: 216 PWRELGNSIGEAYQVADDIQDAIADTATIGKPTGIDVALDRPSAV 260
>gi|195119624|ref|XP_002004330.1| GI19872 [Drosophila mojavensis]
gi|193909398|gb|EDW08265.1| GI19872 [Drosophila mojavensis]
Length = 413
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 102/288 (35%), Gaps = 22/288 (7%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATL 79
V+ V++Y + GK+ R +LT+ T + L +E + + +
Sbjct: 105 VKWFAQVMQYNVPR-GKKNRGILTVLTYKNLVPAEDLTPENIKLAQYLGWCVEMLQSFFI 163
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ DDV+D+S RRG+ V + ++ A +++ ++L+
Sbjct: 164 ISDDVMDNSTTRRGQKCWHRVESVGLIAINDALMIENALYAILKQHFSHLDCYVALMELF 223
Query: 140 LAEGELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-- 190
+ + +K++ + I +S L + +
Sbjct: 224 HEVTYITTCGQSLDLLNSNKSVSEFTMETYKAIVDNKTAHYSFYLPFALAMHLAGYKDAE 283
Query: 191 -RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ K+ + +G FQ+ DD LD G GK + N L V+ + +++
Sbjct: 284 AFRQSKTILLEMGHFFQVQDDFLDCFGNPEVTGKVGTDIQDNKCSWLAVVAMQRANAEQK 343
Query: 250 KNFWKSTINDGKISVENLKKAFIIMR--ENRAL--VDTEYRAYSYGQK 293
+ + + VE +K + + A+ ++ ++ Q+
Sbjct: 344 QIMIDCYGQNDPLKVERVKALYKELSLPSTYAIFEEESYNMIKTHIQQ 391
>gi|302675370|ref|XP_003027369.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8]
gi|300101055|gb|EFI92466.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8]
Length = 300
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 91/299 (30%), Gaps = 21/299 (7%)
Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
Y GK +R L L L D +A + +H A+L+ DD+ D S RRG+
Sbjct: 6 YTAQHKGKDIRGRLIAGLNLWLNAPPDAVQAVAEVVAGLHAASLMLDDIEDSSDTRRGQP 65
Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155
A + + A K L A + EL L + LD
Sbjct: 66 A--AHIVYGIPQTMNAGNYACAKVYADVKKLYPFLTAKKPSLEDVLTEELLSLFRGQGLD 123
Query: 156 VTEEDYLHV-------IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
+ D L L A + + +GI Q+
Sbjct: 124 ILWRDTHRCPTEEGYVRMINGKASGLLRLAARLLSACGTTNTDRDYVPLMNLVGIFGQIR 183
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD ++ K +D GK + P+I Q + + +
Sbjct: 184 DDFMNIYSTEYTNTKGFADDISEGKYSFPMIHGIQASMGD--TTLEDILKQRPTTPTLKV 241
Query: 269 KAFIIMRE-NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC------LQR 320
KA + + ++ T + + +R L + L +VD+ ++R
Sbjct: 242 KAIDYLTDVTKSYDYTVDVMQKLEDQMRAEIRRLGGN---DILETLVDYLHVDPSKIER 297
>gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 112/316 (35%), Gaps = 23/316 (7%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82
SD E ++ YL GK R +L + +L+ + +HTA+LL D
Sbjct: 15 SSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGILHTASLLID 74
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
D+ D+S +RRG A L +G ++ +++ +A ++ + ++ + L +
Sbjct: 75 DIEDNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDSPQIDHNVLLK 134
Query: 143 GELRQ-----------------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ + + +ED +
Sbjct: 135 ELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNKTGGLFRLAVRIMETLN 194
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL-AFQR 244
+ ++L LGI +Q+ DD+ + + K ED GK + P+I
Sbjct: 195 GNSKDSKSLVPLANLLGILYQVRDDLQNLTDQNMIEKKGYAEDISEGKLSFPIIHGVKFE 254
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKD--SLRCL 301
+ + I + + K+A + ++ ++ T + Q + + +
Sbjct: 255 LKEGKDRKLVDIIKSKTMDFDIKKEAVDYLENKSYSIAYTSEAIKNISQMIMNDGYIPEV 314
Query: 302 PDSSWKKSLMEVVDFC 317
++S K L +V++
Sbjct: 315 NENSKKNIL-NIVEYL 329
>gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588]
Length = 295
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L DL + + I + + + S GKR R +L L A D
Sbjct: 9 LRDLVEIRLAQ----ISGQFGVVSAPLGAAMSDAALSPGKRFRAVLMLMVAESSGGVCDA 64
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
V ACA+E +H A+L+ DD+ RRG+ A + G +VL G L+++A
Sbjct: 65 MVDAACAVEMVHAASLIFDDMPCMDDARTRRGQPATHVAHGEGRAVLAGIALITEAMR 122
>gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMD-9]
gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9]
gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus ND03]
Length = 290
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 12 MEKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
++K++ I + + Y + SGGKR+RP++ L +H
Sbjct: 4 LKKIDAAIRDFYQKKTPPVSSDLISAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFD 63
Query: 67 LACAIEFIHTATLLH 81
+A ++E IHT +L+H
Sbjct: 64 IAASLEMIHTGSLIH 78
>gi|115461042|ref|NP_001054121.1| Os04g0657100 [Oryza sativa Japonica Group]
gi|113565692|dbj|BAF16035.1| Os04g0657100 [Oryza sativa Japonica Group]
gi|215704288|dbj|BAG93128.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629693|gb|EEE61825.1| hypothetical protein OsJ_16465 [Oryza sativa Japonica Group]
Length = 392
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 23/311 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHTATLLHD 82
+ ++ Y + GGK R + + + L+L+ + +L +E+ LL D
Sbjct: 85 LAQMIDYNV-PGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLD 143
Query: 83 DVVDDSALRRGKVAARLVWG-----NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137
D++DDS RR ++ +++ +L E + +
Sbjct: 144 DIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIWSEI 203
Query: 138 CTLAEGELR-----QLSLSKNLDVTEEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSV 190
+ + +L + I F + + L++G +
Sbjct: 204 ALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED 263
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
LK + +GI FQ+ DD LD + N +GK + + L V + +
Sbjct: 264 FSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIE 323
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
++ SV +K+ + + + E R Y++ S+ D + ++ L
Sbjct: 324 VLHRNYGKKDSSSVSEVKRTYAALDLKDIFSEFERRCYNHL---VTSIEAQKDHAAREIL 380
Query: 311 MEVVDFCLQRL 321
+ + QR
Sbjct: 381 ISFLKKIHQRK 391
>gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus
norvegicus]
Length = 267
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 3/215 (1%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E+ + + + LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE---DLKPLLDTLGLFFQIR 187
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
DD + + K+ ED GK + P I A
Sbjct: 188 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW 222
>gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
Length = 297
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 5/225 (2%)
Query: 18 LILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIH 75
I + ++ + Y +F GG R+RP L LA AL A A E +H
Sbjct: 20 AIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLH 79
Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
A+L+HDD+ RRGK + +G + +VL GD L+ AF + E S
Sbjct: 80 CASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVR 139
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + E + + A + + + A +
Sbjct: 140 MAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPSE 199
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ G ++G A+Q+ DD+ D + +GK G D +P+
Sbjct: 200 PWRELGNSIGEAYQVADDIQDAIADTATIGKPTGIDVALDRPSAV 244
>gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
Length = 291
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 23/287 (8%)
Query: 9 LKDMEKVNFLILK-----RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD- 62
+ + V + + ++ ++ + + V Y I +GGKR+RP L L L+
Sbjct: 4 QEKLALVESALEEFYGDQQLAAN---LREAVLYSIHAGGKRIRPYLLLEVLESLQVPITI 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG---------NQTSVLVGDFL 113
H +A A+E IHT +L+HDD+ + + L L
Sbjct: 61 AHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGSLTNHKKFGEALAILAGDALFLDPYAL 120
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
++QA A +LS + + G++ + + E+ + +KT L
Sbjct: 121 IAQANLPNEIKVDLIASLSLSSGSMGMVAGQVLDMEGEG-KHLNLEELQTIHANKTGKLL 179
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ + + +IA + +++ LK+ G +G+AFQ+ DD+LD E+GK +D + K
Sbjct: 180 AFPFQAAGVIAELDENLQIQLKTVGELIGLAFQVRDDILDVTASFEEIGKTPQKDLQAEK 239
Query: 234 PTLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRE 276
T P +L ++ + + I+
Sbjct: 240 STYPALLGLDEAKVFCNRTLNQANEKLDVISQLVDFDKEPIVKIVES 286
>gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442]
Length = 292
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 5/225 (2%)
Query: 18 LILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIH 75
I + ++ + Y +F GG R+RP L LA AL A AIE +H
Sbjct: 15 AIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLH 74
Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
A+L+HDD+ RRGK + +G + +VL GD L+ AF + E S
Sbjct: 75 CASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVR 134
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ + E + + A + + + A +
Sbjct: 135 MAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPSE 194
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ G ++G A+Q+ DD+ D + +GK G D +P+
Sbjct: 195 PWRELGNSIGEAYQVADDIQDAIADTATIGKPTGIDVALDRPSAV 239
>gi|260940298|ref|XP_002614449.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
gi|238852343|gb|EEQ41807.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
Length = 358
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
D K +++ KA + ++E+ +L T Y KA L P+ L E+V
Sbjct: 293 EDRKNDPDSIAKAILFIKESGSLKFTYDLLQEYVSKALQMLGSFPEPDDACKLREIV 349
>gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
Length = 356
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 22 RICSDVEMIPDV----VKYLI----------FSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + V+ + D +Y + GGK +RP L L +A + V
Sbjct: 38 ALQAAVDRLDDASRTQARYHLGWTKLDGSPGAGGGKAVRPALALLSAAAAGAGVEVGVPG 97
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A A+E +H +LLHDD++D RR + + WG +++L GD +L+ A +++E S
Sbjct: 98 AVAVELVHNFSLLHDDLMDGDTERRHRTTVWVQWGASSAILCGDAMLALAQEVLLEAPSP 157
Query: 128 EALEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
A A + L G+ L+ DV ++ L + KT L +A+ + +++A
Sbjct: 158 HAAPAARLLAVTTRELIRGQAEDLAFESRDDVGVDECLSMAAGKTGSLLAASASIGAVLA 217
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
G + +AL +YG +G+AFQLVDD+L G+ GK + D R+ K +LPV A +
Sbjct: 218 GAPAAQTEALHTYGHEVGMAFQLVDDLLGIWGDPGVTGKPVLSDLRSRKKSLPVTYAIRN 277
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
G + DG + + L A ++ +
Sbjct: 278 GGDIGRELGDWLAADGDPTDDELHAAARLVEQGGG 312
>gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 383
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 68/345 (19%), Positives = 117/345 (33%), Gaps = 37/345 (10%)
Query: 13 EKVNFLIL----KRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++V + + + S E + V+ + GK LR M +
Sbjct: 41 DRVEETVRRRCAEHVHSMEGAEFLAGVLTDFVGR-GKYLRSMFGYLGWRAAAPDSPAALD 99
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVG 110
+E +H LL DDV+D S LRRG+ + +VL+G
Sbjct: 100 AVAGLELLHAFALLQDDVMDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRFGESGAVLLG 159
Query: 111 DFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
D L A + + LA G+ L T ++ + V+
Sbjct: 160 DLCLVWAEQAMRESGLPRDALDRGWPRYDAMRSELAVGQFADLLNEARRVPTLDEVMDVL 219
Query: 166 KSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224
+ K+ LE+ + +AG + + L YG +G AFQ+ DDVL G GK
Sbjct: 220 RRKSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMRDDVLGVFGTDA-TGKP 278
Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE--NLKKAFIIMRENRALVD 282
G+D K T V+LA + + + ++ ++ A ++ A
Sbjct: 279 TGDDLAERKATSVVVLARELAGPATRPRLDALLHGSDTDDGPVDVAAARELIDATGARRR 338
Query: 283 TEYRAYSYGQKAKDSLR-CLPDS----SWKKSLMEVVDFCLQRLN 322
E + A + + D L + C R++
Sbjct: 339 VEELISTRVAGALRLVEAAVDDGHLGDDVAGVLRAMAVRCADRIS 383
>gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 377
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 64/345 (18%), Positives = 121/345 (35%), Gaps = 40/345 (11%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYL-------IFSGGKRLRPMLTLATALMLEYRG--- 61
+ +N + + S + ++ Y GGK R +A +L +
Sbjct: 33 LADINNRL--TVSSSNTLRDSIINYFDTCIEYTTKDGGKLNRATSLVAAYDILHHHHHDD 90
Query: 62 -------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D + LA +E + + L DDV+D S+ RRGK G ++ G FL
Sbjct: 91 DQHDDDRDIALKLAWCVEILQSHFLTLDDVMDSSSTRRGKPCWYTKVGVSNAINDGAFLY 150
Query: 115 SQAFCMVIETKSQEAL-----------------EALSLVACTLAEGELRQLSLSKNLDVT 157
S + + S + V + + + + +K ++
Sbjct: 151 STIYPFIRNIASHKEWLLDVIDIFAHIEQCTLIGQHLDVNGGMQQQQQQDSEHNKEKEIE 210
Query: 158 EEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
+ + + K+ + A++ V + +K + LG+ FQ DD LD
Sbjct: 211 RFNTIALYKTAFYTYYLPASVGVFASDDKDAVKYLPLIKDVCLKLGVYFQAQDDFLDCYA 270
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
+GK IG D K + A T N + SV+++++ I R
Sbjct: 271 SPEVLGK-IGTDIEECKASWLYCTAIDVLTMDNNNKLYTLYKKDDKSVDDVERVKAIYRS 329
Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ +D E R Y +++K L + + ++ + L R
Sbjct: 330 SP--LDMEKRFMIYEEESKKELDNIISKVNHDGVRMLLTYMLDRT 372
>gi|315304980|ref|ZP_07875057.1| polyprenyl synthetase [Listeria ivanovii FSL F6-596]
gi|313626650|gb|EFR95706.1| polyprenyl synthetase [Listeria ivanovii FSL F6-596]
Length = 75
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL 55
D+++V I K I + + VK LI +GGK LRP L +A
Sbjct: 13 LSNDLKEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQ 60
>gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
Length = 234
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L +A++ Q+A +L +P + + L E + ++R N
Sbjct: 193 GLEGAIEKAHTLLQEALQALEAIPYN--TQLLEEFARYVIERKN 234
>gi|153840450|ref|ZP_01993117.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
gi|149745889|gb|EDM57019.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
Length = 89
Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L +A++ Q+A +L +P + + L E + ++R N
Sbjct: 48 GLEGAIEKAHTLLQEALQALEAIPYN--TQLLEEFARYVIERKN 89
>gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 369
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 59/312 (18%), Positives = 110/312 (35%), Gaps = 36/312 (11%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
+ GK +RP L + + + L CA E +H A L+HDDVVD +RRGK
Sbjct: 66 LATGKLMRPSLVMLGYRAFGGGNEARAIDLGCAFELLHAALLIHDDVVDRDFMRRGKATI 125
Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157
++ +Q S ++ + + + L + ++ A + +
Sbjct: 126 SALYRDQASASGRSLADAEHAGNSVGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAFFE 185
Query: 158 EEDY------------------------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ A F L+ +L+AG +A
Sbjct: 186 AIEQAGAGELEDLLYSLGSAAATTSQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQAEA 245
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ + G LG+A+Q++DDVL G+ + GK+I D R K T+ E +
Sbjct: 246 IGAVGCQLGVAYQIIDDVLGTFGDPAQTGKSIESDLREFKSTIL------LALASEDKEF 299
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA---KDSLRCLPDSSWKKSL 310
+ ++ + + + + + A +A L LP+ + L
Sbjct: 300 AALLSGFREGKVDAGRIRHELAAHGTERFARQLAKQLCSRATGSSAFLD-LPE-EARTLL 357
Query: 311 MEVVDFCLQRLN 322
+ L+R +
Sbjct: 358 HQCSALILERSS 369
>gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7]
gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus
tokodaii str. 7]
Length = 283
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
++++ L + + + +V KY++ GKR R LT L
Sbjct: 12 EIIDKLVDDYLVDIKDW----------QLLEVSKYILKD-GKRFRGTLTFLFTEALNGDI 60
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N A A E +H+A+L DD+VD +RRG +A ++ N+ + + ++L+ A
Sbjct: 61 KNAYKAALASEILHSASLALDDIVDYDIIRRGGSSAWAIYTNRKVIFITNYLIPSA 116
>gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter
alkaliphilus HTCC2654]
gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2654]
Length = 286
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 49/302 (16%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVD 86
+ + + Y + GGK LR L + A + + D A AIE +H ++L+H +D
Sbjct: 26 PLAEPMAYAVE-GGKGLRGFLVIEGASLFDVSPDRSSYAAAAIEAVHASSLVHDDLPCMD 84
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
D LRRG+ + W T VLVG L AF +V + L
Sbjct: 85 DDDLRRGRPTVHVKWDEATGVLVGVALQFLAFELVGDPAVGSGDIRAELARTLGHGAGGF 144
Query: 147 QLSLSK------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
+ + + + +I + + + A + + R+ L+ YG
Sbjct: 145 GMVMGQSLDLAAEVAPNPLTLDEIIALQAGKTGALFEWSAFAGAILGEADREPLRQYGAA 204
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG AFQ+ DD+LD G+ +GK + +D GK T +L
Sbjct: 205 LGQAFQIADDILDIEGDAETVGKAVQKDKDAGKATFVSLL-------------------- 244
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ RA+ A D L + +L E F + R
Sbjct: 245 ------------------GMDGARKRAHMLVDNACDVLAPFGQKA--DNLREAARFAISR 284
Query: 321 LN 322
N
Sbjct: 285 KN 286
>gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 291
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
+ + +++ I+ + + + + Y + +GGKR+RP+L L + H
Sbjct: 4 EEKIRQIDQTIIDYYSQQAVSDSLVESILYSVQAGGKRIRPLLLLELVEAFDLPLQPAHF 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + + L L++
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDPCGLIAV 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A + + + + G+ + + ++ + KT L +
Sbjct: 124 AELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEG-CQLDLKELKAIHAHKTGKLLAFP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ L+A V V+ L+ G +G+AFQ+ DD+LD E+GK +D K T
Sbjct: 183 FVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDVTASFEELGKTPQKDLVAAKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTI-------NDGKISVENLKKAFIIMRENR 278
P +L ++ + + S E+L K +R
Sbjct: 243 PALLGLEKAKETLDQVLDQAQNLLKEIAKNRPFSGESLTKIIESLRLYD 291
>gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
Length = 403
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 29/291 (9%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC---AIEFIHTATLLHDDVVDDSALRRG 93
+ GGKR+RP A+E + L+HDD++DDSA RRG
Sbjct: 88 FVVGGGKRIRPTFAWWGWRGAGGDPAAAGAALRAVSALELLQACALVHDDLIDDSATRRG 147
Query: 94 KVAARLVWGNQT----------------SVLVGDFLLSQAFCM-----VIETKSQEALEA 132
+ + + + ++L+GD L+ A + A
Sbjct: 148 RPTVHVEFAGRHRDGGWSGPADRFGAAAAILLGDIALAWADDTLQSSGLDAAALARAGAP 207
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF-SAALEVSSLIAGVQNSVR 191
+ + G+ + D + + V + KTA L + + +AG + +
Sbjct: 208 WRAMRTEVLCGQYLDVLAQATADTSTAAAMRVNRFKTAAYTVERPLHIGAALAGADDRLV 267
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV----ILAFQRGTK 247
A + +G ++GIAFQL DD+L G+ + GK G+D R GK TL V A +RG
Sbjct: 268 AAYRGFGTDIGIAFQLRDDMLGVFGDPDVTGKPAGDDLREGKRTLLVALALERAAERGDT 327
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ D + + + ++ A+ E R + A D+L
Sbjct: 328 ASAQVVTGALGDPALDAAGVDRVRDVLTCLGAVDAVEERIAALTASALDAL 378
>gi|229004390|ref|ZP_04162149.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock1-4]
gi|228756861|gb|EEM06147.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock1-4]
Length = 56
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
K+ ++ + A+ + Y KA + ++ LP K +L V + +R
Sbjct: 2 KEIIHDIKTSPAIDRAFAFSERYLHKALEVIKPLPRGQAKYALQNVAKYIGKRK 55
>gi|195029339|ref|XP_001987531.1| GH19915 [Drosophila grimshawi]
gi|193903531|gb|EDW02398.1| GH19915 [Drosophila grimshawi]
Length = 413
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 102/284 (35%), Gaps = 22/284 (7%)
Query: 31 PDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIHTATLLHDD 83
V++Y + GK+ R +LT+ T + L +E + + ++ DD
Sbjct: 109 AQVLQYNVPR-GKKNRGILTVLTYKNLVPADQLTPENIKLAQYLGWCVEMLQSFFIISDD 167
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
V+D+S RRG+ +V + + ++ A +++ ++L+
Sbjct: 168 VMDNSTTRRGQKCWHMVENVGLNAINDALMIENAMYAILKQHFSHLDCYVALMELFHEIT 227
Query: 144 ELRQL-------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQA 193
+ + +K++ D I +S L + + +
Sbjct: 228 YITTCGQSLDLLNSNKSVSEFSMDNYKAIVENKTAYYSFYLPFAIAMHLAGYKDPEAFRQ 287
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
K+ + +G FQ+ DD LD G GK + N L V+ + ++++
Sbjct: 288 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANAEQKQIMI 347
Query: 254 KSTINDGKISVENLKKAFIIMR--ENRAL--VDTEYRAYSYGQK 293
+ VE +K+ + + A+ ++ ++ Q+
Sbjct: 348 DCYGQTDPLKVERVKELYKELSLPSTYAIFEEESYNMIKTHIQQ 391
>gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
Length = 290
Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 19/291 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M+ KD N + + I + ++Y +F GGK++R + + + +
Sbjct: 1 MQNKLARIAKD---TNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A+E IH +L+HDD +DD +RRGK++ + +G T+VL G+ LL+ A
Sbjct: 58 NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117
Query: 118 FC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
F + + +A G+ LS K + I K
Sbjct: 118 FEILVSSSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEI-KK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T LFS V +I N+ + ++ G N+G+ FQ+ DD++D++G GK G+D
Sbjct: 177 TGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKGSTVIAGKLTGKD 236
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI---SVENLKKAFIIMRE 276
+ GK TL +L +Q K I D + +L + + +
Sbjct: 237 KKKGKATLISLLGYQNAIKYADKIKSKIIKDLNKYSSNTNSLNETLDYILK 287
>gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens]
Length = 385
Score = 49.2 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 65/343 (18%), Positives = 127/343 (37%), Gaps = 35/343 (10%)
Query: 9 LKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-H 64
+ +V KR + + + D + + + +GGK +RP + L L R ++
Sbjct: 47 EDRLAQVLAEARKRSRTVSAQYGQLWDSLTH-MATGGKLIRPRMLLDAHAALGGRDEHAA 105
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
V ACA++ +H A ++HDDV+D+ +RRG+ + ++ + A+ +
Sbjct: 106 VDAACAMQLLHIALVIHDDVIDNDTIRRGEATISGEFASEAMSRGALRRDANAWGIATSI 165
Query: 125 ----------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--------- 165
S A + + + +L +
Sbjct: 166 LGGDLILTLSHSLLARLDIEDTKRRAILDIFDDTVVESAAGEHSDVWLSLHLEGANSPDV 225
Query: 166 -----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ F A L +++++AG + + L + +G+ +QL DDVL G+ E
Sbjct: 226 LAMVDQKTAVYSFQAPLLIAAVLAGADSGLIDDLANISRQIGVIYQLRDDVLGLFGDERE 285
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK+ D R GK TL + A + + D +S + + ++ E+ AL
Sbjct: 286 TGKSNVSDLREGKETLLITFAR---SDPSWPEVHTLFGDRMLSNADGDRLRKVIEESGAL 342
Query: 281 VDTEYRAYSYGQKAKDSL--RCLPDSSWKKSLMEVVDFCLQRL 321
V E + + LP + L+++ R
Sbjct: 343 VFVESMITQRCENLYRLIGEAALPP-ALSNQLIQLTSDASSRT 384
>gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
Length = 338
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 11 DMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--D 62
+++ ++ + R+ + +++ ++ + GKR+RP+L + TA L
Sbjct: 51 ELQALHDALQTRLDELLPPGQERDLVCAAMREGALTPGKRVRPLLLILTACDLGCDASQP 110
Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E +H A+L+ DD+ +D++ LRRGK +G ++L LLS+AF
Sbjct: 111 ALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALLSRAF 168
>gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 289
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
+D+ L D + + + SD ++ ++Y GGKRLR L L +A +
Sbjct: 2 SFKDVLLTDAAHIQARLDAAMAGLSDQPVV-QAMRYATQ-GGKRLRGFLVLESARLHG 57
>gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
Length = 290
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 18/290 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+ L KD N + I + +KY +F GGK++R + + M+
Sbjct: 2 INKLNK-IAKD---TNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSI 57
Query: 60 RGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + A+E IH TL+HDD +DD +RRGK + + +G T++L G+ L + A
Sbjct: 58 DYKTLIAIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMA 117
Query: 118 FCMVIETKSQEALEALSLVACTLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKT 169
++ +K + + + L+E + V+++ + + KT
Sbjct: 118 CEILTSSKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKT 177
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
LFS ++I N + + G +G+ FQ+ DD++D+ G GK G+D
Sbjct: 178 GKLFSFCCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLIDFHGNSKSAGKQTGKDQ 237
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTI---NDGKISVENLKKAFIIMRE 276
+ GK TL ++ + K T +N+K + +
Sbjct: 238 KKGKATLISLMGYTNAVKYCDRIIIDTNKTLKKYGSKSKNIKDTLEYILK 287
>gi|238603525|ref|XP_002395972.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
gi|215467625|gb|EEB96902.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
Length = 232
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ V+++ GGK R + LA L + L AIE +HT +L+ DD+ D+S
Sbjct: 139 LFAPVRHITERGGKSWRSYIVLACLSALGKDPEPFKPLLAAIELLHTGSLVIDDIQDESP 198
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
RRG A VWG T++ G ++
Sbjct: 199 TRRGVTAVHHVWGVPTAINAGTAAYLRSSRPC 230
>gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
Length = 280
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 10/229 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
+K +L K++ LI ++ + D + Y I GK LR L + A
Sbjct: 10 VKDFSNLVGKELT---KLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGV 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ + L AIE +H+ +L+HDD+ RRGK + + G ++L GD LL+
Sbjct: 67 SIERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLT 126
Query: 118 FC----MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
F M + A+ + AC Q NL+ + E + K KTA LF
Sbjct: 127 FELLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLF 186
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
SAA E +++A V + +QAL SYG LG AFQ DD+ D + + +
Sbjct: 187 SAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLN 235
>gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268]
gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268]
Length = 357
Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 13/278 (4%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLL 67
+EK + + + S + + Y++ +GGK R L L ++ R + + +
Sbjct: 78 LEKFKDYLKQNELKAPSFHPYFEEALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAI 137
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
A A+E IHT +L+HDD+ LRRG+ + + T++LVGD L + AF +
Sbjct: 138 AMALEMIHTYSLIHDDLPAMDDADLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAASAN 197
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV------IKSKTAVLFSAALEV 179
+ ++ + G + E L KT L +AA E+
Sbjct: 198 LSDEIKIKCIKTLARNAGSGGMVLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFEL 257
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++I G+++ + L G+ LG+ FQ+ DD++D G+ GK +G D +
Sbjct: 258 GAIIGGLKDELAHELYKIGLKLGLIFQIEDDIIDATGDEASAGKPVGADGAKNSFVNLLG 317
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
LA R K+ S G ++ +
Sbjct: 318 LAGARSYKQRLIDEVSGAMSG-YDESLRDLVLNLIEKY 354
>gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter hominis ATCC BAA-381]
gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter hominis ATCC BAA-381]
Length = 297
Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 25/270 (9%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + L +E IH A+LLHDDV+D+S +RRG + V+G++ +V++GD S+AF
Sbjct: 43 GESEISLKLCAIVELIHAASLLHDDVIDESDIRRGNPSINAVFGSKNAVMLGDIFYSKAF 102
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ + + + +S L+ GEL + +S+N + E+YL +I KTA
Sbjct: 103 -FELCSFNDFISKTISNAVFKLSIGELMDVKMSENFNKNRENYLTMIYYKTAG---LIES 158
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
V+ + A + NS + YG NLG+AFQ++DD+LD + ++GK DF++GK TLP
Sbjct: 159 VAKIGAFLANSDCEKFAEYGKNLGLAFQIIDDILDITQDSKKLGKPALNDFKDGKTTLPY 218
Query: 239 ILAFQRGTKREKNFWKSTINDGKISV------ENLK--KAFIIMRENRALVDTEYRAYSY 290
I +++ E+ +S + + K + A ++
Sbjct: 219 IYLYEKLPLNEREILQSYFKKELNDEQSAWIKDKFQEFKI---------IEFCIDEAKNF 269
Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
G+KA +++ + L+++ + + R
Sbjct: 270 GKKAVEAVEEFNNKE----LIKIAENMINR 295
>gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396]
gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396]
gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
Length = 290
Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 13 EKVNFLILKR-------ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNH 64
EK++ I + SD + + Y + SGGKR+RP++ L +H
Sbjct: 5 EKIDAAIRDYYQKKNLPVSSD---LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSH 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSA 89
+A ++E IHT +L+HDD+
Sbjct: 62 FDVAASLEMIHTGSLIHDDLPAMDN 86
>gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 383
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 63/311 (20%), Positives = 112/311 (36%), Gaps = 27/311 (8%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ I Y RPML + TALM + + +LLA A++ L+HDD+ D
Sbjct: 78 DYINRPSHYT--------RPMLLMLTALMYDNQDPATLLLAAAVQLSQEWILIHDDIEDK 129
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL------EALSLVACTLA 141
S +RRG ++G+ ++ +GD L S + M I+ +
Sbjct: 130 SEMRRGMPTLHKLYGSSAALHIGDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYST 189
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSK------TAVLFSAALEVSSLIAGVQNSVRQALK 195
Q + ++ L++ ++ AG ++ + L
Sbjct: 190 ASGQFQELNFMYGKDGLRSAKESTYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLG 249
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G N GIAFQ+ DD++D + GK D R GK TL + F + EK
Sbjct: 250 AIGENAGIAFQINDDIIDMQKG-YNSGKGEFNDIREGKLTLIIKHTFDLASDDEKQRLAE 308
Query: 256 TINDG--KISVENLKKAFIIMRENRALVDTEYR----AYSYGQKAKDSLRCLPDSSWKKS 309
N + + E +K + + + + ++ L +P + +
Sbjct: 309 IYNKPREQKTGEEIKFVIGAIEKYDGIGFAAKKRDEIIERTTEQMLGFLDFIPKNKFAAW 368
Query: 310 LMEVVDFCLQR 320
L + R
Sbjct: 369 LQATIINIYNR 379
>gi|221116455|ref|XP_002156744.1| PREDICTED: similar to Pdss1 protein, partial [Hydra magnipapillata]
Length = 199
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------DNHVLLACAI 71
I + + + + + Y + GK RP+L + A L + + +A
Sbjct: 69 IREELNIKSKHFQECIHYYFDNEGKLFRPVLIVLMAKALNVHQQNTSDLLECQLKMAMIA 128
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
E IHTA+LLHDDV+DD+ LRR K + ++ ++ S+L GDF+L++A
Sbjct: 129 EMIHTASLLHDDVIDDAVLRRNKPSVNQIFSSKQSILAGDFILARA 174
>gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1]
gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1]
Length = 303
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D+++LRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 350
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 115/326 (35%), Gaps = 25/326 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
V + + + I ++ Y GGK +R L + A +
Sbjct: 30 ALVRPALSEAVGRLHPWIGEMAAYSFGWCEVGGAPVAAPGGKGVRQALAVLGAEVAGAPA 89
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
V A A+E +HT +LLHDD++D A RR + A +G +VL GD L + A +
Sbjct: 90 RAGVAAAVAVELVHTFSLLHDDIMDGDADRRRRPAVWKAYGTGPAVLAGDALFALAVETL 149
Query: 122 IETKSQEALEALSLVACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSA 175
A + V ++Y V + KT L
Sbjct: 150 AAQPGGAEAVRTLSAALGDLVRGQADDLLFTERPWTGPERVRPDEYRAVAEHKTGALLGC 209
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
A + + + G AL G +LGIAFQ+VDDVL G+ GK + D R K T
Sbjct: 210 AAALGAALGGAAPETVAALDRVGRHLGIAFQIVDDVLGIWGDPRVTGKPVHGDLRERKKT 269
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PV++A + A ++ + A +
Sbjct: 270 FPVLVALDSPVGGRLVALLEAGDAPG-------AAAELIEQAGGRAAAMAEARRHIAVVD 322
Query: 296 DSLRCLPDSS-WKKSLMEVVDFCLQR 320
+L +P + L ++ F ++R
Sbjct: 323 TALAGVPLGAGAAAELRALLGFLVRR 348
>gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
Length = 294
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLL 67
M+ + + + + + ++ ++ +GGKR RP L L ++ +
Sbjct: 1 MQDFENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVESAMTP 60
Query: 68 ACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A A+E HT +L+HDD+ LRRG+ + ++L GD L + AF M
Sbjct: 61 ALALEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEM 115
>gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter concisus 13826]
Length = 297
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 34/319 (10%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA---------LMLEYRGD 62
M+K++ ++ K I S++ + + M ++ L + +
Sbjct: 1 MDKIDEIMSKFI-SELGY-KEAFE------------MFLKISSGKKLRSKLLLKIAGESE 46
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ L IE IH A+LLHDDV+D++ +RRGK + ++G++ SV++GD L S+A+ +
Sbjct: 47 ISLKLCAIIELIHLASLLHDDVIDEANIRRGKPSINALFGSKNSVMLGDILYSKAY-FEL 105
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+S L+ GE+ + +++N + E++YL +I KTAVL A +
Sbjct: 106 TKFDPSIAAVISDAVSKLSIGEMMDVKMAENFNENEQEYLKMIYYKTAVLIEATAICGAK 165
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+AG + YG NLG+AFQ+VDD+LD + +GK DF GK TLP I +
Sbjct: 166 LAGKDSE---KFGLYGKNLGLAFQIVDDILDITQDEKTLGKPALNDFVEGKTTLPYIYLY 222
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + K +S K++ + + + +L A G A ++++
Sbjct: 223 KSLDEAGKTKLRSLWAK-KLNADEISWLKENFDKTSSLSKAINEAKRLGNGAIEAIK--- 278
Query: 303 DSSWKKS-LMEVVDFCLQR 320
+K + L ++ + R
Sbjct: 279 --EYKNAELEGIIKSMIDR 295
>gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 386
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 7/132 (5%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G ++GIAFQL DD L G GK G+D R GK T+ + L + R + S
Sbjct: 256 FGEDVGIAFQLRDDELGVFGSPQATGKPAGDDLREGKRTVLLALTWGRCGDAGRRLLGSV 315
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS---WKKSLME- 312
+ + + + E + + ++ + A E ++ +L L S SL +
Sbjct: 316 LANPEATPEQIGEVAALIEDCGARAAHEEIITTHRNAGSRALEQL-RSEGVVSTASLEDL 374
Query: 313 --VVDFCLQRLN 322
+ D R++
Sbjct: 375 TVLADLLTHRVS 386
Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPML-----TLATA---LMLEYRGDNHVLLACAIE 72
+ + + + SGGKR+R +L + +A G + V L A+E
Sbjct: 31 EDLGQAAPELLGAAS-SVLSGGKRMRAVLGAIGCAILSAPEQRAECLTGSDAVHLGAALE 89
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
+ L+HDD++D + RRG AA +
Sbjct: 90 LYQASALVHDDLMDGADTRRGMPAAHRAFTRDHEAR 125
>gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
Length = 291
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L H
Sbjct: 4 QEKLALVESALENFYGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLHVTIRPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
Length = 345
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 104/297 (35%), Gaps = 24/297 (8%)
Query: 2 KMLEDLTLKDMEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-ML 57
+ L + + V ++ + + +E I +V++Y GGK R +L + A +
Sbjct: 7 EEFIQLFHELKDDVLQILEQDLDMPQDAIEWIREVMEYNCL-GGKLNRGLLVVECAKSLF 65
Query: 58 EYRGD-----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112
+L IE + L+ DD++D+S +RRG++ + + + + F
Sbjct: 66 GEELSPEIKRKANILGWCIELVQAFFLIADDIMDNSLMRRGQICWYKLPKVELTAVNDAF 125
Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--------------SLSKNLDVTE 158
L+ ++ + + ++ ++ S V
Sbjct: 126 LMESFVFRILRLHFRNEITYTDIIHLFQDTIHRTEMGQLLDLTSQPLNAPSDLSRFTVER 185
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ K+ + L + Q + M +G FQ+ DD LD G+
Sbjct: 186 YRKIVRYKTAYYTFYLPLACAMLLRGILDEPSHQVAQDICMEIGEYFQIQDDFLDCFGDE 245
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
N +GK + N L + ++ + + + + SV +K+ + +
Sbjct: 246 NVLGKVGTDIQDNKCSWLILQALDHANDEQRELLKEHYGSSEEDSVAKVKELYKSLN 302
>gi|312078710|ref|XP_003141856.1| polyprenyl synthetase [Loa loa]
gi|307762977|gb|EFO22211.1| polyprenyl synthetase [Loa loa]
Length = 346
Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 58/299 (19%), Positives = 106/299 (35%), Gaps = 9/299 (3%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-----AIEFIHTATLLHD 82
+ I + + + GGK R +L + L + D + +E + + L+ D
Sbjct: 46 DRIEKLFDHSVC-GGKYKRSILLVTAYKALGGKQDEEQMKMITNTAACLELLQSFFLIED 104
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEALSLVACTL 140
DV+D+ RRGK + G + + LL +A
Sbjct: 105 DVMDEGVNRRGKPCWHRLEGIGMNGINDGLLLDCMVSYTLRSNRIPAAVRDAFDEARRVT 164
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
G++ D T + + + + KT+ + ++ Q + + LK
Sbjct: 165 VLGQILDSDTKGVEDCTWQRHRTITQHKTSHYTYFTPLQIAALSTAQPLIIEPLKRIAYQ 224
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
LG FQ DD +D G+ + MGK G D R K T A ++ + + G
Sbjct: 225 LGYLFQSKDDYMDCFGDKSIMGKV-GNDLRGAKCTWVTCKAVEKLINQPSFLVDFQEHFG 283
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
K S+ + ++ I+ R D + +S+ P + L + VD +
Sbjct: 284 KRSITSERRLKDILTHLRVADDFPLFRERCAVEILNSIDHFPMIDLRPILRQSVDDLVN 342
>gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 287
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + + + + ++ +F G R+RP L + A
Sbjct: 6 RIERALTEALSQADLAGCPPRLAAAMRSAVFPRGARVRPRLCHSVAAACGDDNPATEAAG 65
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A+E +H A+L+HDD D + +RRG+ + +G +VL GD L+ AF
Sbjct: 66 AALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQ 118
>gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
Length = 291
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 20/278 (7%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + L L++Q
Sbjct: 64 QVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A +L+ + + G++ + ++ E+ + +KT L +
Sbjct: 124 ADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEH-QHLSLEELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
P +L + + E L++ +
Sbjct: 243 PALLGLEESIAFCNQTL-------DQANEKLEEIAQQI 273
>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
Length = 289
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVD 86
+ + + Y + GGKR+RP++ L D H +A A+E IHT +L+HDD+
Sbjct: 23 PDLIEAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLPA 82
Query: 87 DSA 89
Sbjct: 83 MDN 85
>gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32]
Length = 303
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHYHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+ +G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
Length = 288
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 14 KVNFLI-----LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + L + + + ++Y +F G R+RP L + A A
Sbjct: 6 RIERALTDAIGLAAVTGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDNPAATEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D +A RRG+ + +G +VL GD L+ AF
Sbjct: 66 GAALELMHCASLVHDDLPCFDGAATRRGRPSVHKAFGEPLAVLTGDALIVLAFQ 119
>gi|53734594|gb|AAH83212.1| Ggps1 protein [Danio rerio]
Length = 284
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 5/250 (2%)
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
N ++ E +H A+LL DD+ D S LRRG A ++G + + +++ V+
Sbjct: 21 NCQVIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVL 80
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+ EA+ + L G+ + E + +
Sbjct: 81 MLEHPEAVRVFTRQLLELHRGQGLDIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQ 140
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
+ LK LG+ FQ+ DD + + K+ ED GK + P I A
Sbjct: 141 LFSDWKR---DLKPLLDTLGLYFQIRDDYANLNSKQYSANKSFCEDLTEGKFSFPTIHAI 197
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + + + + + + + T +A ++ L
Sbjct: 198 WSHPESTQVQNILRRRTENLDI--KRYCVDYLEKVGSFAYTRQTLLDLEVEAYRLIKELG 255
Query: 303 DSSWKKSLME 312
+ ++L+E
Sbjct: 256 GNPELEALVE 265
>gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
Length = 288
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 66/316 (20%), Positives = 118/316 (37%), Gaps = 50/316 (15%)
Query: 14 KVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + +++ + I ++Y GGKRLR L L +A + + + A A+E
Sbjct: 12 RIGDFLTRQLADLGDDTIAQGMRYAT-GGGKRLRGFLALESAALFDVPPGQALYAAGAVE 70
Query: 73 FIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130
+H +L+H +DD LRRG+ W + T+VLVGD L + AF ++ + A
Sbjct: 71 CLHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDDATAVLVGDALQTFAFELISREDAGTAE 130
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ--- 187
E ++L A + + L + D+ E + + A +
Sbjct: 131 ERVALTASLAKASGAQGMVLGQAQDIAAETAGRALTLQEITGLQANKTGRLIEWPAHAGA 190
Query: 188 ---NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244
+ L+ Y +G+AFQ+ DD+LD G+ + GK + +D GK T +L +
Sbjct: 191 VLGGADPAPLQRYARAIGLAFQIADDILDVEGDAAKAGKALRKDADAGKATFVSLLGMEA 250
Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304
R YG KA
Sbjct: 251 AKARSAALVADATAALAP---------------------------YGDKA---------- 273
Query: 305 SWKKSLMEVVDFCLQR 320
++L ++ + + R
Sbjct: 274 ---QTLRDLAQYIVTR 286
>gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
Length = 170
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M ++ ++ +++N + + +++ + + Y + + GK++RP+ L E
Sbjct: 1 MNNFKNFIEENKDQLNSFAKEYVEKLDMPDILKESITYSLVNDGKKIRPLSFLYLLKYYE 60
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDD--SALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
N+ +A AIE +HT +L+HDD+ + R GK+ V+G +VL GD +L+
Sbjct: 61 VDYTNYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDLAVLTGDAMLTL 120
Query: 117 AFC 119
AF
Sbjct: 121 AFE 123
>gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
Length = 303
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNH 64
+ E+ + + S + ++ +GGKR RP L L ALM + N
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQ 70
Query: 65 ----VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
ATCC 33806]
gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
ATCC 33806]
Length = 368
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 56/306 (18%), Positives = 103/306 (33%), Gaps = 33/306 (10%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY------RGDNHVLLACAIE 72
+ + S V ++ + + +GGKR+RP A + + A A+E
Sbjct: 35 LGDAVGSAVTLLEN----YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALE 90
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---VLVGDFLLSQAFCMVIETKSQEA 129
I L+HDD++D S RRG + + +++ +
Sbjct: 91 LIQACALIHDDIIDSSDTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAW 150
Query: 130 LEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSK------------------TA 170
+ + A + A + Q + L I + A
Sbjct: 151 ADDMVRAAGLSHAALDRMQPAWRGMRTEVIGGQLLDIIHEASGDEDIATAQVVNRFKTAA 210
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
L + + +AG + AL++YG ++G+AFQL DD L G+ GK G+D R
Sbjct: 211 YTIERPLHLGAALAGADAATIAALRAYGTDIGVAFQLRDDQLGVFGDPGVTGKPAGDDLR 270
Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290
GK T+ + A Q ++ + + + + + + A E
Sbjct: 271 EGKRTVLIATALQLADAATADYIRGRLG-RVSDPDEIAELTAAIAATGAAEHVEKLIGEL 329
Query: 291 GQKAKD 296
Sbjct: 330 TASGLA 335
>gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564]
gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564]
Length = 291
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 20/289 (6%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHVAIQPAHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + L +++Q
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYVMIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A + + + + G++ + ++ E+ + +KT L +
Sbjct: 124 ADLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEH-QHLSLEELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + V+ LK+ G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGK-------ISVENLKKAFIIMRENR 278
P +L + + E++ K +R N
Sbjct: 243 PALLGLEEAIAFCNQTLDQANAKLEEIAQQIPFETESIVKVVESLRING 291
>gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
Length = 291
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
++ + I + E +I D + Y GGKRLR +L L TA + + V A AIE
Sbjct: 14 RIAACLDDLIGAQPESVIRDGMAYAT-RGGKRLRGVLVLETAWLHGVAPERAVYAAAAIE 72
Query: 73 FIHTATLLH 81
+H +L+H
Sbjct: 73 CLHAYSLVH 81
>gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1]
gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
Length = 291
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 60/280 (21%), Positives = 104/280 (37%), Gaps = 24/280 (8%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90
V++ +F+GG R+RP L L A + A AIE +H A+L+HDD+
Sbjct: 31 VRHAVFAGGARVRPRLCLTVAAACGDDHPELADAAATAIELMHCASLVHDDLPCFDDAAT 90
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL-RQLS 149
RRG+ + +G + +VL GD L+ A + T Q A +L+ + ++
Sbjct: 91 RRGQPSVHAAYGERLAVLAGDALIVHALETLALTVPQAPQRAGALLTTVTRATGMPYGIT 150
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ + E + AA V+ IA + G LG A+Q+ D
Sbjct: 151 AGQAWESEPEIPVAEYHQAKTGSLFAAATVAGAIAAGAEDQADRWRIVGERLGEAYQVAD 210
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D+ D G +E+GK G+D +G + +++
Sbjct: 211 DLRDAVGAEDELGKPTGQDSSHGLANAVSEHG--------------LQGAKERLDRLVQE 256
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
A + E ++ LP+S + +
Sbjct: 257 AVDAVPECAGAEQLRAGILQEMER------VLPESLGRSA 290
>gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
Length = 344
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
+E+V L+L + +E + +Y I + G LR L LA+ E + V+ A
Sbjct: 35 LEQVRALMLDALQGVMEGPANNASQYQISTRGSLLRARLALASCRSFECSQEYAVVAAAC 94
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
E IH A+L+HDD++D LRRG+ G ++ GD LL AF
Sbjct: 95 CELIHNASLVHDDLLDGDQLRRGQATVWKRHGRGVALCAGDLLLCTAF 142
>gi|119709594|dbj|BAF42694.1| geranylgeranyl diphosphate synthase-3-B-isoform [Nasutitermes
takasagoensis]
Length = 316
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 104/290 (35%), Gaps = 7/290 (2%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + ++ GK++ + A L+ D ++L IH + L+ +D+ D
Sbjct: 21 EEKLLQPFAHITQVPGKQILSRIPHAYNYWLKVPADKLIVLKEIDYIIHHSGLIFNDIQD 80
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG A +G +++ +LL + V +A+ + + G+
Sbjct: 81 NSILRRGIPVAHSKYGVPSTINAVIYLLLKGLMKVQSLNHPDAIAVCTEHLLEMYYGQGL 140
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
++ N + + + A + + + L++ + + M + Q
Sbjct: 141 EICWRDNYTCPLLEEYKQMIKRKAGFWLFKIGLLQLLSDNKIDFTKLNSILAMYV----Q 196
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ +D + + K ED GK + P+I A + VE
Sbjct: 197 IREDYCNLCLQQYADEKGYCEDISAGKFSFPIIHAIMS--HPHDQQVIHILRQRTRDVEL 254
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK-SLMEVVD 315
K F ++ + + T +A+ + L + + L E++D
Sbjct: 255 KKYCFTLLEKFGSFSYTRRILKEMDAEARAEVAKLGGNPVLENVLNELLD 304
>gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus]
Length = 359
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 18 SLVSKEMNTLAKNIVALIGSGHPLLNKVTSYYFETEGKKVRP 59
>gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl
trans transferase /farnesyl diphosphate synthase/Geranyl
geranyl pyrophosphate synthetase [Helicobacter pylori
908]
gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate
synthase/Dimethylallyltransferase/Geranyltranstransferas
e/farnesyldiphosphate synthase/Geranylgeranyl
pyrophosphate synthetase [Helicobacter pylori 2018]
gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017]
Length = 303
Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHRLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D+++LRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA41317]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA41301]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54]
gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1873-00]
gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC3059-06]
gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669]
gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae JJA]
gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1873-00]
gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC3059-06]
gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC
700669]
gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae JJA]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae
OXC141]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CCRI 1974]
gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CCRI 1974M2]
gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1087-00]
gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC0288-04]
gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1087-00]
gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC0288-04]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae 70585]
gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae 70585]
gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA17545]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6]
gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39]
gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Hungary19A-6]
gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae P1031]
gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6]
gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39]
gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Hungary19A-6]
gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae P1031]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae
TIGR4]
gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae MLV-016]
gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Taiwan19F-14]
gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae MLV-016]
gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Taiwan19F-14]
gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae
INV200]
gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA04375]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130]
gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130]
Length = 289
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 9/233 (3%)
Query: 13 EKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66
++ + + + + V +F GG R+RP LTLA A + +
Sbjct: 5 ARIEECLERSLSRAANADCPPKLRAAVHSAVFPGGARVRPQLTLAVAEACGDHEIELVDG 64
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A AIE +H A+L+HDD DD+ LRRGK ++G + +VL GD L+ +AF + +
Sbjct: 65 AAAAIELLHCASLVHDDLPCFDDADLRRGKPTIHSLYGEEIAVLTGDALIIEAFNTLCAS 124
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+Q +LVA A + + ED + V + A S + A
Sbjct: 125 SAQHPSRLPALVAAVCAATGMTTGITAGQAWE-SEDVVDVERYHCAKTGSLFVGAVCAGA 183
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
S +S G +G A+QL DD+LD G E GK +G+D +G+P+
Sbjct: 184 LAVGSDPLPWRSLGSRIGAAYQLADDLLDALGSEEESGKPVGQDRTHGRPSAV 236
>gi|148688711|gb|EDL20658.1| mCG16244 [Mus musculus]
Length = 212
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 4/200 (2%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ D +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLDPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LR G A + G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRHGFPVAHSICGVPSVINSANYVYFLGLEKVLTLDHPDAMKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
E+ + + + + ++ LK LG+ FQ+
Sbjct: 131 YWRDTYTCPTEEEYKAMVLQKTGGSFGLVVGLMQ----FSDFKEDLKPLLDTLGLFFQIR 186
Query: 209 DDVLDYRGEVNEMGKNIGED 228
DD + + K+ ED
Sbjct: 187 DDYANLHSKEYSENKSFCED 206
>gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
Length = 288
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 5/229 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A A A+E IH A+L+H
Sbjct: 20 GSEAPSKLASALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVH 79
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + AL LV
Sbjct: 80 DDLPCFDDAEIRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRALQLVTAL 139
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 140 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 198
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+G AFQ+ DD+ D + + +GK G+D + +P + TKR
Sbjct: 199 RIGEAFQVADDLRDALCDADTLGKPAGQDEIHHRPNAVREYGVEGATKR 247
>gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured
proteobacterium eBACred25D05]
Length = 308
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 5/249 (2%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLACAIEFIHTATLLHDD--VVD 86
+ D ++Y +F GG R+RP + L+ A+ A A+E IH A+L+HDD D
Sbjct: 46 LDDAIQYSVFPGGARIRPTILLSVAVACGDDNPSLANASAAALEMIHCASLVHDDLPCFD 105
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
++ RRGK + +G T+VLVGD L++ AF ++ ++A+ A L+A
Sbjct: 106 NAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVIARAADKDAVRAAKLIALLSKYTGFP 165
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + E +T A + + G +G AFQ
Sbjct: 166 KGICAGQAWEAEISVDLSAYHQTKTGALFIAATQMGAASAGHDPEPWFE-LGARIGEAFQ 224
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
+ DD+LD +E GK G+D N +P ++ ++ I+
Sbjct: 225 VADDLLDVLCSEDETGKPSGQDVTNQRPNAVSEYGISGAKQKLRDILGGAISSIPSCPGE 284
Query: 267 LKKAFIIMR 275
K I++
Sbjct: 285 -AKLAEIVK 292
>gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 337
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 22/305 (7%)
Query: 12 MEKVNFLILKRICS---DVEMIPDVVKYLI----------FSGGKRLRPMLTLATALMLE 58
++ + + + S I +++Y + KR+RP+L L L
Sbjct: 11 LQSIEEHLARATASISESQGEIEAMIRYHLGVHAAPPARPLGHSKRVRPLLLLTAHAALG 70
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ A AIE++H +L+HDD+ D S LRRG+ + VWG ++ GD L + AF
Sbjct: 71 GDWRAALPAAVAIEYVHGFSLIHDDIEDRSPLRRGRASLWAVWGVDRALNAGDALFALAF 130
Query: 119 CMVIETKSQEALEA-------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
++ + ++ L+ G+ L+ + +V+ E YL + + KT
Sbjct: 131 RVMGDLADHFDARWVVETYQAMTDACIALSAGQELDLAFEQVENVSIEQYLAMAELKTGA 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
LF AALEV++++AG SVR L++ G LG+ FQ++DD D G ++GK +D
Sbjct: 191 LFGAALEVAAILAGQPPSVRDDLRNAGRKLGVLFQILDDFHDLFGREEDLGKPTAQDALR 250
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI-IMRENRALVD-TEYRAYS 289
K TLPV+L R + + + N + + I+RE A+ +
Sbjct: 251 RKKTLPVVLGLSRDREFAEMWRCLRDNQEMLPHLRARLVTDSILREAIAIEERVRAELQH 310
Query: 290 YGQKA 294
++A
Sbjct: 311 RMERA 315
>gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
ambofaciens ATCC 23877]
Length = 380
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 96/287 (33%), Gaps = 26/287 (9%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRR-- 92
L+ GGKRLR GD +L E + L+HDDV+D S RR
Sbjct: 61 LVARGGKRLRTAFACCGWRAAGGSGDPAAVLRVGAALELLQACALVHDDVMDGSLQRRGA 120
Query: 93 --------------GKVAARLVWGNQTSVLVGDFLLSQAFC------MVIETKSQEALEA 132
G + +G +VL GD L A + + E
Sbjct: 121 PALHVELARGHWAAGMHGSAETFGTSAAVLAGDLALVWADDLLTETALGTPHGPRLHEEW 180
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
++ +A L + + +E + L + + +AG +
Sbjct: 181 RAMRTEMVAGQYLDLHAQAARSSGVDEALTVATLKSALYTVARPLALGASLAGADEGTVE 240
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL+ G G+AFQL DD+L G+ GK G+D R+ K T + +A + +
Sbjct: 241 ALRMAGRCAGLAFQLRDDLLGAFGDPALTGKPAGDDLRSRKLTYLLAVAHRTADATADHQ 300
Query: 253 WKS--TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + S +++ + A E +
Sbjct: 301 AAAVLAPDADTGSEYAVERIRAALERTGAREAVEAKIGELAAAGLRH 347
>gi|281413632|ref|ZP_06245374.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 371
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 38 IFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
+ +GGKRLR +L + A E A L+HDD++D S RRG
Sbjct: 7 LTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRRGMP 66
Query: 96 AARLVWGNQT 105
+ + +
Sbjct: 67 SVHRRFESLH 76
>gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
SP9-BS68]
gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae SP195]
gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
SP9-BS68]
gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae SP195]
gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA17570]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V ++ + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESVLEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143]
gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 20/278 (7%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALENFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + L L++Q
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A +L+ + + G++ + ++ ++ + +KT L +
Sbjct: 124 ADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEH-QHLSLKELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D + K T
Sbjct: 183 FQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
P +L + + E L++ +
Sbjct: 243 PALLGLEEAKAFCNQTL-------DQANEKLEEIAQQV 273
>gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537]
Length = 255
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 10/228 (4%)
Query: 19 ILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEF 73
+L+++ S + I +K + + GK +RP LTL + + + +N + L ++E
Sbjct: 1 MLQQVSSSWTIGFKDIDTAIKSQLNA-GKLVRPALTLLFSELTDEAYNENAITLGASVEL 59
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H ATL+HDD++D+S LRRG+ + + +G T+V GD+LL+ F ++ + + E +
Sbjct: 60 LHLATLIHDDIIDESKLRRGQTSIQTRFGKDTAVYSGDYLLTGMFTLLNKVNNIEVNQYA 119
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + GEL Q LD+T ++YL IK KTA LF + +
Sbjct: 120 NESLKEILFGELSQKQNRYRLDMTFDEYLLQIKGKTAALFRMSTLFGIMSRPNDEINNFR 179
Query: 194 --LKSYGMNLGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNGKPTLP 237
++ G +G+ FQL+DD LD+ + +GK G+D +NG T P
Sbjct: 180 DLMQKIGETMGMTFQLLDDYLDFSELGDNLALGKPTGQDIQNGIYTAP 227
>gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 111
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
+V + K + + + + GKR+RP+LT AT L + A
Sbjct: 7 RVEHALDKSLPAREHIPRSPPFRRCATQCLAA-GKRIRPILTYATGQALGVEINQLDTAA 65
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
CA+E IH +L+HDD+ +
Sbjct: 66 CAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAY 100
>gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
Length = 263
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDNHVLLACAIEFIHTATLLHD 82
+ E + V+Y I + GK LRP+L L + L+ R + A IE +H +LL D
Sbjct: 27 EPESLRKAVRYYIETPGKLLRPILLLTFSYTLDRRALMDPRLIQAATIIELLHVVSLLQD 86
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
DV+D RRG R+++G+ ++L D+L++++
Sbjct: 87 DVMDKHEERRGIKTPRVLYGDDRTILASDWLIAESIR 123
>gi|315604555|ref|ZP_07879618.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313567|gb|EFU61621.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 367
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 56/324 (17%), Positives = 96/324 (29%), Gaps = 44/324 (13%)
Query: 40 SGGKRLRPML-----TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
SGGKR R ++ L L L L+ A+E + L+HDD++D + RRG
Sbjct: 47 SGGKRFRALMAHVGYCLGAGLALGEV--FLPHLSAALELYQASALVHDDIIDRANERRGA 104
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----------------------ALE 131
+ + +
Sbjct: 105 PTPHRLLADHHGRRRWMGSPTDFGEHAAILVGDFLFSAATDAADAQALLLDEAAAQSFTR 164
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDY------------LHVIKSKTAVLFSAALEV 179
+ + +A G+ + + D +
Sbjct: 165 RFADMHAEVALGQYLDIVAEQTPLDPHRDDAVSGADALDVALHKSAHYSVVHPAALGAIC 224
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
+S G +++ L S G+AFQL DD L G+ GK G+D R GK T+ +
Sbjct: 225 ASAPPGQVSTLLAILDSVLTPWGLAFQLRDDDLGVFGDPQVTGKPAGDDLREGKRTVLLA 284
Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
L ++ T E+ + S + A I+ N E +L+
Sbjct: 285 LTWEASTPSERRELTRVLAVPTASPSEIGAATRIVARNG-RDAHEETIARLVADGHAALQ 343
Query: 300 CLPDS-SWKKSLMEVVDFCLQRLN 322
++ L E+ R +
Sbjct: 344 RANVGDEARRVLAELCSLLTARRS 367
>gi|158295166|ref|XP_001688773.1| AGAP006016-PA [Anopheles gambiae str. PEST]
gi|157015904|gb|EDO63779.1| AGAP006016-PA [Anopheles gambiae str. PEST]
Length = 447
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 51/368 (13%), Positives = 102/368 (27%), Gaps = 62/368 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALM 56
L L ++ V + K + S+ ++ K LI + G ++ L +
Sbjct: 80 SLRWLLSDEIANVALHLRKLVGSNHPLL-KAAKTLIYNDKNQQAWG-----LIVLLVSKA 133
Query: 57 LE--------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA----AR 98
+ LA E I T+ L+H +++ + +
Sbjct: 134 AGHLDNIPDMEQDKSAGVLHSQRALAEVTEMIRTSHLVHQGMLNLQSYDNAGNDLSGDSD 193
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+++GN+ ++L GD+LL+ A V ++Q+ +S LAE +N +
Sbjct: 194 MIFGNKIALLGGDYLLANASQQVATLRNQDLNMLISSAFRDLAESNFIGERDEQNNPLPT 253
Query: 159 EDYLHV-------IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211
+ + + + + S LG L
Sbjct: 254 KPGTQLKELATDLNSLEDLGFGDLEDNTEPMKIDGVVGHPEKEWSLRHVLGGGSLLGKAC 313
Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----------------------- 248
+ + + GK A
Sbjct: 314 MAALMLGGHPKPLQKQGYVFGKHLALAWQACIDMQPFLLPTLPLGAQFSLVSAPVLFHLE 373
Query: 249 EKNFWKSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
I G S+ N+ K + L T+ + A L LP +
Sbjct: 374 HDVALYEEIEKGSRSIHNIDYTKVHQAVLNGPGLERTKILQRKHSLVALKVLDELPSTDA 433
Query: 307 KKSLMEVV 314
+ +L ++
Sbjct: 434 RTALQNII 441
>gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300]
gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321]
gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
Length = 291
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|47218346|emb|CAG04178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1960
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/264 (4%), Positives = 44/264 (16%), Gaps = 13/264 (4%)
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA-LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
H A + + + +
Sbjct: 1110 HHTEGYACQHCKAGYYGNAATQSCRKCTCDPVGTLPRACSSPEECACDQQSGQCPCKPNV 1169
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-----KSKTAVLFSAAL 177
+ + + + + + S
Sbjct: 1170 VGQDCDRCAPDTWNMAGGTGCRTCDCDPDHSFGSSCNEASQAHEITGRCSCKPGFGGRTC 1229
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ V+ + Q G + R + T P
Sbjct: 1230 RECREMFWGDPKVKCHACDCDPRGISSEQCHRATGQCTCTKGASGPRCDQCARGYRGTFP 1289
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + + + + ++ + A+ + AK
Sbjct: 1290 ACEPCHQCFAAWDVVVGELSDQTRRLEAQVAE----LQNSGAIAPYQELIQRLETNAKAV 1345
Query: 298 LRCLPDSSWK---KSLMEVVDFCL 318
+ + +++ E+
Sbjct: 1346 RDLVESNPAAVQLEAIEELTHQIT 1369
>gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
Length = 283
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLE 58
M +E + ++ +I K + S ++ + +V KY++ GKR R +L + L
Sbjct: 1 MDFIEYWIKTK-QLIDDVIQKYL-SQIKDLDMLEVSKYILKD-GKRYRAVLNMFFTEALG 57
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N + A AIE +H+++L DD+VD RRGK++A ++ N+ V + ++L+ A
Sbjct: 58 GELSNSLDAALAIEILHSSSLALDDIVDYDTTRRGKLSAWALYTNRRVVFITNYLIPSA 116
>gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 289
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 9/227 (3%)
Query: 12 MEKVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
M ++ ++ + + ++ +F G R+RP L A A
Sbjct: 4 MARIEKSLVAAVALADRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATD 63
Query: 67 LA-CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A AIE +H A+L+HDD D++ LRRG+ + +G +VL GD L+ AF +
Sbjct: 64 AAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQ-TLA 122
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L L+A + + E + ++ A S
Sbjct: 123 KSRCSPLRLAQLIATIGDAVGVPHGIAAGQAWECEPEIDLSHYHRSKTGALFAAATVSGA 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
A ++ +A +S G +G A+Q+ DD+ D + E GK +G+D
Sbjct: 183 AAAGHANPEAWRSLGEKIGEAYQVADDIRDAASDEEEAGKPVGQDAA 229
>gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470]
gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470]
gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464]
Length = 303
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDGAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+D ++ V+ + + + + I + ++Y + +GGKR
Sbjct: 69 NFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKR----------------- 111
Query: 62 DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
N + ACA+E IHT +L+HDD +D+ LRRGK V+G +VL GD LL+ AF
Sbjct: 112 SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFE 171
Query: 120 M 120
Sbjct: 172 H 172
Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A + ++AK+ L D L+ + D+ R N
Sbjct: 259 GLEKSREFAENLNKEAKEQLSGF-DLEKAAPLIALADYIAYRQN 301
>gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori India7]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVVSGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEKESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
Length = 161
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 13 EKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67
E+V ++ + + + + Y + GGKR+RP+L L+ + L
Sbjct: 38 EEVEAILTTFLPEEKGPAKTGIEAMNYSLMVGGKRIRPILLREAFLLFAGEERQKLFLPL 97
Query: 68 ----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
A+E IH+ +L HDD+ + + +
Sbjct: 98 TEAFMLAMEMIHSFSLCHDDLPAMDNDKYRRGKEATWYR 136
>gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G++ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
Y25]
gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
Y25]
Length = 290
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 58/331 (17%), Positives = 109/331 (32%), Gaps = 50/331 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M+ L V LI + + + + Y +GGK LR L L +A +
Sbjct: 1 MQSLSTRMAAAAADVQALIAAHLSPLAAASPVASAMIYAC-TGGKGLRGFLVLESARLHG 59
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-------VGD 111
+ + +A A+E +H +L+HDD+ + + +
Sbjct: 60 IAYADALPVAAAVEAVHAYSLVHDDMPAMDDDDLRRGRPTVHRQWDEATALLAGDALQSL 119
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
A + ++ L + A ++ ++ +I +
Sbjct: 120 GFELIATAALPDSARVTLLAGFARAAGIHGMVGGQEADIAAETAARPLSLDQIIALQRGK 179
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ +S A + + L+++G +G+AFQ+ DD+LD G MGK + +D
Sbjct: 180 TGALITWSASAGAVMAGADAAPLRAFGDAIGLAFQITDDILDVEGSAATMGKAVQKDAAA 239
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T +L L + +A +
Sbjct: 240 GKATFVSLL--------------------------------------GLQGAKDQALALL 261
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
Q A +L +P + +L E F + R N
Sbjct: 262 QTADAAL--IPYGATAATLRETAQFVITRQN 290
>gi|157167323|ref|XP_001660255.1| candidate tumor suppressor protein [Aedes aegypti]
gi|108882900|gb|EAT47125.1| candidate tumor suppressor protein [Aedes aegypti]
Length = 454
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 48/368 (13%), Positives = 108/368 (29%), Gaps = 63/368 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALM 56
L L ++ V + K I S+ ++ K LI + G ++ L +
Sbjct: 88 NLRFLLSDEIANVALHLRKLIGSNHPLLKSA-KSLIYNDKSQQAWG-----LIILLISKT 141
Query: 57 LEYRGD--------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA----AR 98
+ + LA E I ++ L+H V++ ++ +
Sbjct: 142 AGHTASVPEMDHDRSVGVLHSQRALAEVTEMIRSSQLIHQGVINLQSMDNAGNNLSGDSD 201
Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGELRQLSLSKN 153
+V+GN+ ++L GD+LL+ A + ++Q+ ++ Q + +
Sbjct: 202 MVFGNKIALLGGDYLLAHASKQIASLRNQDLNMLMTSAYRDLAESAFIGESDDQNNPLPS 261
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG----------- 202
T + + F + + + ++
Sbjct: 262 KPETPAGMNSHECTLEELDFGDVRDNMEPMRIEGVMGHPEKEWSLRHVLGGGSLLGKSCH 321
Query: 203 -------------IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
L + + + + + T ++ A
Sbjct: 322 GALMLAGHPDELQKQGYLFGKHMSLAWQASIELQPFLLNQLPLGTTFSLVSAPVLFHLEY 381
Query: 250 KNFWKSTINDGKISVENLKKA---FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
I GK S+E++ A I+R L T + A + L P +
Sbjct: 382 DPSVYELIEPGKNSIEDVDYAALHREIIR-GPGLEKTRNLQKKHSLAAMNVLDRFPTTDA 440
Query: 307 KKSLMEVV 314
+ +L ++
Sbjct: 441 QTALQNII 448
>gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG---- 61
+ E+ + + S + ++ +GGKR RP L LA ++ +
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQ 70
Query: 62 -DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A IE +HT +L+HDD +D+++LRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALGIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70]
gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s]
gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923]
gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2]
gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150]
gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023]
Length = 291
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 21/234 (8%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
KV + + + D ++Y + GGKR+RP+L A + D + A
Sbjct: 9 SKVEKKLRDSLGDFGNTQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVHKERD-VLDTAI 67
Query: 70 AIEFIHTATLL--HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE+IHT+TL+ +DD +RRGK + + +++L L+ A+ + +
Sbjct: 68 AIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKA 127
Query: 128 EALEALSLVACTLAEGEL---------------RQLSLSKNLDVTEEDYLHVIKSKTAVL 172
A ++ Q D ++E+ L +IK KT L
Sbjct: 128 LKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGAL 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
F A L G + + + + G+ FQ+ DD+ D + E
Sbjct: 188 FEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEEKHMNY 241
>gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori B38]
gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori B38]
Length = 303
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISTSLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
clavuligerus ATCC 27064]
gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
clavuligerus ATCC 27064]
Length = 396
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 99/290 (34%), Gaps = 17/290 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GG LRP+L + +AL + + A +E++H +L H S R V
Sbjct: 99 GG-LLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPD 157
Query: 101 ----------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
G+ + L A V E + + + G
Sbjct: 158 PRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAGA 217
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
R+ + + LD+ E +L + TAV F+AA V + +AG AL YG LG+A
Sbjct: 218 TRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGMA 277
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
+L +++ Y E G+ +L ++
Sbjct: 278 LRLQEELRPYVPERTRRGRRAHRGAAYEPLPTLPLLLAFDRADVRQHDALCRAFAVPAGA 337
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ ++ E Y +A +L LPD+S ++ L +V
Sbjct: 338 GAFRLIRSLVIETGGHRVAAGFVQRYAIRAAGALTALPDTSHRRRLEALV 387
>gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX]
gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276]
gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s]
gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis
D/UW-3/CX]
gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768]
gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222]
gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074]
gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301]
gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC]
gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC]
Length = 291
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 21/234 (8%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
KV + + + D ++Y + GGKR+RP+L A + D + A
Sbjct: 9 SKVEKKLRDSLGDFGNTQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVHKERD-VLDTAI 67
Query: 70 AIEFIHTATLL--HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE+IHT+TL+ +DD +RRGK + + +++L L+ A+ + +
Sbjct: 68 AIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKA 127
Query: 128 EALEALSLVACTLAEGEL---------------RQLSLSKNLDVTEEDYLHVIKSKTAVL 172
A ++ Q D ++E+ L +IK KT L
Sbjct: 128 LKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGAL 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
F A L G + + + + G+ FQ+ DD+ D + E
Sbjct: 188 FEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEEKHMNY 241
>gi|302496364|ref|XP_003010184.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma
benhamiae CBS 112371]
gi|291173724|gb|EFE29544.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma
benhamiae CBS 112371]
Length = 347
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 78/221 (35%), Gaps = 5/221 (2%)
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
DDV D S LRRG A ++G ++ +++ QA + + KS EA+ L
Sbjct: 86 DDVEDSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLH 145
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ L L E+ + ++ + ++SV +
Sbjct: 146 RGQGMDLYWRDTLTCPTEEDYLEMVGNKTGGL---FRLAIKLMQAESSVPIDCVPLVDLM 202
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+ FQ+ DD L+ K + ED GK + PVI + + + + +
Sbjct: 203 GLMFQVCDDYLNLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLIN--ILKQKT 260
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
E K A M + T A KA + L
Sbjct: 261 NDNEVKKYAVKYMESTGSFEYTRKVAIELRDKAFLLIEELE 301
>gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278]
gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
Length = 289
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 9/227 (3%)
Query: 12 MEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
M ++ ++ + + ++ +F G R+RP L A A
Sbjct: 4 MARIEKSLVAAVALAGRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATD 63
Query: 67 LA-CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A AIE +H A+L+HDD D++ LRRG+ + +G +VL GD L+ AF +
Sbjct: 64 AAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQ-TLA 122
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
L L+ + + E + ++ A S
Sbjct: 123 KSRCSPLRLARLIETIGDAVGVPHGIAAGQAWECEPEIDLSHYHRSKTGALFAAATISGA 182
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230
A ++ +A +S G +G A+Q+ DD+ D + E GK +G+D
Sbjct: 183 AAAGHADPEAWRSLGEKIGEAYQVADDIRDAASDEEEAGKPVGQDAA 229
>gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 373
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 99/290 (34%), Gaps = 17/290 (5%)
Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GG LRP+L + +AL + + A +E++H +L H S R V
Sbjct: 76 GG-LLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPD 134
Query: 101 ----------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
G+ + L A V E + + + G
Sbjct: 135 PRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAGA 194
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
R+ + + LD+ E +L + TAV F+AA V + +AG AL YG LG+A
Sbjct: 195 TRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGMA 254
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
+L +++ Y E G+ +L ++
Sbjct: 255 LRLQEELRPYVPERTRRGRRAHRGAAYEPLPTLPLLLAFDRADVRQHDALCRAFAVPAGA 314
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ ++ E Y +A +L LPD+S ++ L +V
Sbjct: 315 GAFRLIRSLVIETGGHRVAAGFVQRYAIRAAGALTALPDTSHRRRLEALV 364
>gi|119499417|ref|XP_001266466.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119414630|gb|EAW24569.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 714
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 5/277 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ +Y+ K +R A + L L + +H A+L+ DD+ D S
Sbjct: 420 LLAPAEYISSLPSKGVREAFVDALNVWLMLPDRTVTQLKSIAQTLHNASLMLDDIEDSSP 479
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
LRRG+ A V+ ++ +FLL QA V + ++ L G+ L
Sbjct: 480 LRRGRPATHTVFVVGQTINSANFLLIQAADQVRRLDDSQCMDIFMEEMRLLFRGQSFDLY 539
Query: 150 LSKN-LDVTEEDYLHVIKSKTAVLFSAALE-VSSLIAGVQNSVRQALKSYGMNLGIAFQL 207
++ +EE+YL +I++KT LF ++ +S+ +L+S LG FQ+
Sbjct: 540 WTRQGECPSEEEYLAMIRNKTGGLFRLIARLMAQKAPFQNHSLHTSLESMAGQLGEYFQI 599
Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVE 265
DD + E K ED GK + P+I A K + + G + +
Sbjct: 600 RDDYKNLT-EEYTGQKGFCEDLDEGKFSFPLIHALSSRPKNLQLRGILQQSRITGGLDIS 658
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ A +R+ ++ TE + + DSLR L
Sbjct: 659 LKECALHHIRDAGSMEYTEKTMSALMDRIDDSLRSLE 695
>gi|300766617|ref|ZP_07076534.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300495717|gb|EFK30868.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 119
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%)
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
IS E L + + + A Y + A + + LP +++L +V L
Sbjct: 57 DHISNEQLLTIRDQVIALGGVTQAQQLATHYTKTALNLIDQLPTGETQQTLRRLVTELLV 116
Query: 320 RLN 322
R +
Sbjct: 117 RNH 119
>gi|195436322|ref|XP_002066117.1| GK22106 [Drosophila willistoni]
gi|194162202|gb|EDW77103.1| GK22106 [Drosophila willistoni]
Length = 411
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 94/277 (33%), Gaps = 29/277 (10%)
Query: 42 GKRLRPMLTLATALML-------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GK+ R +L + T L L +E + + ++ DDV+D+S RRG+
Sbjct: 117 GKKNRGILCVLTYKNLVPADQITPESLKLAHYLGWCVEMLQSFFIMSDDVMDNSTTRRGQ 176
Query: 95 VAARLVWGNQTSVLVGDFLLSQA-------FCMVIETKSQEALEALSLVACTLAEGELRQ 147
+ V G + + ++ A ++ + T L Q
Sbjct: 177 LCWHRVEGVGLTAINDTLMVENAMFAVLKKHFSHLDCYVDLMELFHEISFITTCGQTLDQ 236
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV---RQALKSYGMNLGIA 204
++ + + D I ++ L + + + K+ + +G
Sbjct: 237 INSHRKVSEFTMDNYKSIVYNKTAYYTFYLPFALAMHLAGFKDAEAFRQSKTILLEMGHF 296
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD LD G + GK + N L V+ + ++++ G+
Sbjct: 297 FQVQDDFLDCFGNPDVTGKIGTDIQDNKCSWLAVVAMQRANAEQKQIMMDCY---GQEDP 353
Query: 265 ENLKKAFIIMRENRAL--------VDTEYRAYSYGQK 293
+ + + +E +L ++ ++ Q+
Sbjct: 354 IKVNRIKDLYKEL-SLPTTYATFEEESYNMIKTHIQQ 389
>gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278]
gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
Length = 316
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ + + + +GGKR R ML LA L + + A AIE IH A+L+ DD+
Sbjct: 39 PAPLQAGMSHAVLAGGKRYRGMLVLALGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPC 98
Query: 87 DSALRRGKVAARLV 100
RR +
Sbjct: 99 MDDARRRRSQPATH 112
>gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
Length = 291
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 21/234 (8%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
KV + + + D ++Y + GGKR+RP+L A + D + A
Sbjct: 9 SKVEKKLRDSLGDFGNTQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVHKERD-VLDTAI 67
Query: 70 AIEFIHTATLL--HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE+IHT+TL+ +DD +RRGK + + +++L L+ A+ + +
Sbjct: 68 AIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKA 127
Query: 128 EALEALSLVACTLAEGEL---------------RQLSLSKNLDVTEEDYLHVIKSKTAVL 172
A ++ Q D ++E+ L +IK KT L
Sbjct: 128 LKAVVSCEQDVEEAYEDILELIELRFGIGGILGGQYEDIFFHDFSKENVLGIIKKKTGAL 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
F A L G + + + + G+ FQ+ DD+ D + E
Sbjct: 188 FEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEEKHMNY 241
>gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4]
gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4]
Length = 303
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D++ALRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis]
Length = 293
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L +E++ + + + + + S G+R R ML L A D V
Sbjct: 12 LLQTRLEEIAQGF----GAVSQPLGAAMSHGALSSGRRFRGMLMLLAAEASGGVCDTIVD 67
Query: 67 LACAIEFIHTATLLHDDVVDDSA 89
ACA+E +H A+L+ DD+
Sbjct: 68 AACAVEMVHAASLIFDDLPCMDD 90
>gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20]
Length = 303
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNR 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+ +G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDGAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348]
gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348]
Length = 279
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
E V + + S ++ KY++ GKR R L L + A A E
Sbjct: 13 ELVEKFLDE---SKEWETMEMSKYIMRD-GKRFRGTLMFLFNGALGGEEKDAYPGALATE 68
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+H+A+L DD+VD +RRG AA V+ N+ + V ++L+ A
Sbjct: 69 ILHSASLALDDIVDYDEIRRGMKAAWAVYTNRKVIFVSNYLIPTA 113
>gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198]
gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198]
Length = 287
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 16/240 (6%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLA--TALMLEYRGDNHVL 66
+ + + + + ++ +GGKR RP L A + N L
Sbjct: 7 LREFEEFLQSYPIEMEGFHPVFAKAFWEMLKNGGKRFRPALLFAVVCSQNFSL-AKNAFL 65
Query: 67 LACAIEFIHTATLLHDDVVDDSA---------LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
A A+E +HT +L+HDD+ L R +LL++A
Sbjct: 66 PALALECLHTYSLIHDDLPCMDDASLRRGYPTLHRSYDEVTATLVGDGLNTFSFYLLTKA 125
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ + + G+ + E + +KTA L + +L
Sbjct: 126 HLDPSTRLRLIEMLSHYGGIGGMVIGQAMDCYFEN-QHLEIEKLYAIHLNKTAKLIATSL 184
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +IA + + + L +GM+LGI FQ+ DD++D +GK D+
Sbjct: 185 CMGGVIANLPDGELRNLWDFGMDLGIFFQVRDDIIDRVENAQSVGKTTNNDYNKNSYVNL 244
>gi|158295164|ref|XP_316048.4| AGAP006015-PA [Anopheles gambiae str. PEST]
gi|157015903|gb|EAA11709.4| AGAP006015-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G +L +A+Q D+ + ++ ++ + + +L + +
Sbjct: 339 YMFGKHLSLAWQACIDLEPFGCDLCDLPPGV-------RFSLVSAPVLFHLAHDPSLYEE 391
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + K + + T + + A + L LP S + +L ++
Sbjct: 392 IQKGRESVDNIDFVKVHAAVLKGPGPERTRVLQKKHSEAALEVLNDLPPSDARTALQNII 451
Score = 39.9 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S+ ++ LIF+G G ++ L +
Sbjct: 85 SLRWLLSDEIANVALHLRKLVGSNHPLLRTAKM-LIFNGKNNMQAWG-----LIVLLVSK 138
Query: 56 MLEYRG 61
+ +
Sbjct: 139 AVGHAP 144
>gi|322797846|gb|EFZ19754.1| hypothetical protein SINV_16081 [Solenopsis invicta]
Length = 246
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 8/234 (3%)
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
DD+ D+S LRRG A V+G +S+ +++L A V+ + A L
Sbjct: 2 DDIQDNSILRRGIPVAHSVFGIASSLSAANYVLFIALERVVNLQHSGATRVYMEQLLELH 61
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
G+ + N E+ + + ++ + + ++ ++ S L
Sbjct: 62 RGQGMDIFWRDNFICPTEEDYKTMTIRKTGGL---FNLAVRLMKLFSTYQEDFSSLIATL 118
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
G+ FQ+ DD + K+ ED GK + P+I A + +
Sbjct: 119 GLYFQIRDDYCNLCLGEYTENKSYCEDLTEGKFSFPIIHALTNNPDDRQIIH--ILRQRT 176
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+E + ++ + + T A+ + L + L+ ++D
Sbjct: 177 KDIEVKRHCVKLLEKFGSFKYTRNVLEELDSTARAEIERLGGNP---LLVRILD 227
>gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 383
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 61/323 (18%), Positives = 101/323 (31%), Gaps = 36/323 (11%)
Query: 4 LEDLTLKDMEK---VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58
L +++ ++ + + + V + GGKRLR L
Sbjct: 35 LASYLDDRLQEARQMDAVFAEEVAGRVAA-------FVLRGGKRLRTAFVWCGWLAAGRG 87
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------------- 105
V + A+E + L+HDDV+D S +RRG A +
Sbjct: 88 GDPGTPVRIGAALELLQACALVHDDVMDGSPVRRGAPAVHADFARAHREAGLRGSAASYS 147
Query: 106 ---SVLVGDFLLSQAFC--MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+VL GD L+ A + +E Q + D
Sbjct: 148 ATAAVLAGDLALAWADDLLTETALAAPHGDRLHREWRAMRSEMVAGQYLDLRAQATGSSD 207
Query: 161 YLHVIKSKT----AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
T L + ++ A AL+S G G+AFQL DD+L G
Sbjct: 208 GDEARTIATLKSALYTVERPLALGAVSAAADARATAALRSAGRCAGLAFQLRDDLLGAFG 267
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKKAFIIM 274
+ GK GED K T + +A +R T+ + + + E + + +
Sbjct: 268 DPALTGKPAGEDLSGRKLTYLLAVAVRRATETGDMEGLAVLGPDQADHTEEGVDRMRAAL 327
Query: 275 RENRALVDTEYRAYSYGQKAKDS 297
A E + +
Sbjct: 328 EATGARAVVEDEIAALAASSVRH 350
>gi|312376900|gb|EFR23860.1| hypothetical protein AND_11967 [Anopheles darlingi]
Length = 450
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 13/122 (10%)
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
+G +L +A+Q D+ + + G
Sbjct: 334 YMFGKHLSLAWQACIDLEPFSSDQLPSGGRFSLVSAPVLF-----------HLEHDPSLY 382
Query: 255 STINDGKISVENLKKA--FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ I G S+EN+ A + + L T + Q A + L LP S + +L
Sbjct: 383 AEIEKGLESIENVNYAAVHAAVLKGPGLERTRALQRKHSQAAMNVLNELPPSDARTALQN 442
Query: 313 VV 314
++
Sbjct: 443 II 444
Score = 38.4 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-------GKRLRPMLTLATAL 55
L L ++ V + K + S+ ++ K LI++G G ++ L +
Sbjct: 80 SLRWLLSDEIANVALHLRKLVGSNHPLLRTA-KILIYNGKNNMQTWG-----LIVLLISK 133
Query: 56 MLEYRG 61
+ +
Sbjct: 134 AVGHAP 139
>gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
Length = 288
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 5/221 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A A A+E IH A+L+H
Sbjct: 20 GSEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVH 79
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + + AL LV
Sbjct: 80 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTAL 139
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 140 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 198
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G AFQ+ DD+ D + +GK G+D + +P
Sbjct: 199 RIGEAFQVADDLRDALCDAETLGKPAGQDEIHARPNAVREY 239
>gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
Length = 292
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 5/221 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A A A+E IH A+L+H
Sbjct: 24 GSEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVH 83
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + + AL LV
Sbjct: 84 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTAL 143
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 144 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 202
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G AFQ+ DD+ D + +GK G+D + +P
Sbjct: 203 RIGEAFQVADDLRDALCDAETLGKPAGQDEIHARPNAVREY 243
>gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24]
Length = 303
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ LRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS A + + + + G+ E+ +
Sbjct: 131 ELLSNALLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDGAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|260103263|ref|ZP_05753500.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|260082932|gb|EEW67052.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
20075]
Length = 92
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98
+GGK LRP L L A ++ + LA +IE +H ATL+HDD +DDS LRRG ++ +
Sbjct: 3 DNGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDDTIDDSDLRRGNISIQ 62
Query: 99 LVWGNQTSVLVGDFLLSQAFCMV 121
+G +V G+ L + F ++
Sbjct: 63 AEFGKDVAVYAGNLLFTNFFDLM 85
>gi|300122152|emb|CBK22726.2| unnamed protein product [Blastocystis hominis]
Length = 349
Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 52/330 (15%), Positives = 109/330 (33%), Gaps = 36/330 (10%)
Query: 12 MEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPML-TLATALMLEYRGD----N 63
+ V ++ I E+ I +++Y GGK +R + + M +
Sbjct: 18 LRDVEEILDSTIIVPHELKQDIIKMIEYNC-VGGKMIRGLFAVYSAYAMCNEWNEEMKKR 76
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL--------- 114
+ E + A L+ DD++D++ +RRGK A + + F+L
Sbjct: 77 AFVAGWGAEMLQGAFLIADDIMDEAEMRRGKPAWYRIDRIGMMSVNDTFILQSLIYKLLE 136
Query: 115 ---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
S K E ++ ++ + L + + S N +DY I +
Sbjct: 137 RVISSVSLFYSVQKVFEDIKFVTELGQMLDLNTINHKTHSINYQYFTKDYYEQIITNKTA 196
Query: 172 LFS----AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
++ L + + + L+ + LG FQ+ DD LD + + +GK +
Sbjct: 197 YYTIFLPVYLGLVLTESPKETMHSPQLRELCILLGRYFQIRDDFLDAFADPSVLGKEGTD 256
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
+ + + + + + I + +
Sbjct: 257 IQEGKCSWVILTVFSLCSEEDREALKELYGKSDPRP------VKAIYAKYDVESEFRRFE 310
Query: 288 YSYGQKAKDSL--RCLPDSSWK---KSLME 312
+K ++ L PD+ K +L+E
Sbjct: 311 DEALRKTREILASASFPDARLKPFFDALIE 340
>gi|242212676|ref|XP_002472170.1| predicted protein [Postia placenta Mad-698-R]
gi|220728728|gb|EED82616.1| predicted protein [Postia placenta Mad-698-R]
Length = 328
Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 109/303 (35%), Gaps = 20/303 (6%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + ++ GK +R ++ A LE D ++++ I +HTA+LL DD+ DD+
Sbjct: 27 LLEPFNHINSVRGKEIRGLMLEAFNAWLEVPKDKLMIISRVISMLHTASLLIDDIEDDAQ 86
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEALEALSLVA 137
LRRG A+ ++G ++ ++ A+ + + +V
Sbjct: 87 LRRGVPASHKIYGIPQTINSANYAYFLAYQELFTLRSGVDSGDSEPHRLIPFRQLDRVVT 146
Query: 138 CTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
L Q D + +V + + ++A ++
Sbjct: 147 AELLSLHRGQGLELLWRDSLQCPTEEEYVAMVNNKTGGLFRVAIKLMMACSTKNIDVDYV 206
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
G+ +Q+ DD ++ + K ED GK + P++ A + + +
Sbjct: 207 PLVNLFGVYYQIRDDYMNLQSSEYADNKGFAEDLTEGKFSFPIVHAVR--SDTSNRRVLN 264
Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + +R++ ++ T S + ++ + L + K L +++
Sbjct: 265 VLQKRPTTPTLKVHTVAYLRDHTKSFDYTIDILRSLETQIRNEIARLGGN---KGLEQIM 321
Query: 315 DFC 317
D
Sbjct: 322 DAL 324
>gi|312216572|emb|CBX96522.1| hypothetical protein [Leptosphaeria maculans]
Length = 510
Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 6/262 (2%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92
YL GK +R A L L + ++ + +HTA+LL DDV D S LRR
Sbjct: 197 PYDYLYGHPGKDIRSQCIAAFNLWLHVPAERLEIITRVVGMLHTASLLVDDVEDSSLLRR 256
Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152
G A ++G ++ +++ +A ++ ++ + ++ + L G+ L
Sbjct: 257 GIPVAHSIFGIPQTINSANYVYFKALQHLLLMQNPKLVDIFTEELLNLHRGQGMDLYWRD 316
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+L E + ++ + +++V +G+ FQ++DD L
Sbjct: 317 SLTCPSEADYLEMVGNKTGGL---FRLAIKLMQAESAVDVDCTPLVSTIGLLFQILDDHL 373
Query: 213 DYRGEVNEMGKNIGEDFRNG-KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
+ + K + PVI A + S + E + A
Sbjct: 374 NLSPTSGYTNLKGLCEDLTEGKFSFPVIHAIR--ADPSNQVLTSILKQKTTDEEVKRYAL 431
Query: 272 IIMRENRALVDTEYRAYSYGQK 293
M + ++ K
Sbjct: 432 KYMESKGSFDYSKRVLEELRAK 453
>gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides KD131]
gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides WS8N]
gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides KD131]
gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides WS8N]
Length = 278
Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 5/221 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A A A+E IH A+L+H
Sbjct: 10 GSEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVH 69
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + + AL LV
Sbjct: 70 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTAL 129
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 130 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 188
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G AFQ+ DD+ D + +GK G+D + +P
Sbjct: 189 RIGEAFQVADDLRDALCDAATLGKPAGQDEIHARPNAVREY 229
>gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30]
Length = 303
Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D++ALRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct]
Length = 1798
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L +E++ + + + S GKR R ML L A D V
Sbjct: 336 LLQTRIEEIAQGFGAVLQ----PLGAAM--AALSSGKRFRGMLMLLAAEASGGVCDTIVD 389
Query: 67 LACAIEFIHTATLLHDDVVDDSA 89
ACA+E +H A+L+ DD+
Sbjct: 390 AACAVEMVHAASLIFDDLPCMDD 412
>gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii]
Length = 291
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
L +E++ + + + S GKR R ML L A D V
Sbjct: 12 LLQTRIEEIAQGFGAVLQ----PLGAAM--AALSSGKRFRGMLMLLAAEASGGVCDTIVD 65
Query: 67 LACAIEFIHTATLLHDDVVDDSA 89
ACA+E +H A+L+ DD+
Sbjct: 66 AACAVEMVHAASLIFDDLPCMDD 88
>gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 286
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 12/237 (5%)
Query: 13 EKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLA 68
EK + + + S ++ GGKR RP+L L+ +N + ++
Sbjct: 8 EKFEAFLKRELPVVESFHPHFNQAFGEMLDVGGKRFRPLLLLSVVEASAPLLFENALHVS 67
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+E +HT +L+HDD +D++ALRRG + + T+VL+GD L + AF +
Sbjct: 68 LGLEMMHTYSLIHDDLPCMDNAALRRGHPTLHVTYDETTAVLIGDALNTHAFYRIANAPL 127
Query: 127 QEALEALSLVACTLAEGELRQ------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + G ++ + E + KTA L +A+L +
Sbjct: 128 SAEIKVRLVSILAGDAGIYGMVLGQALDCFFEDKRLDVEQLSFLHVHKTAKLIAASLLMG 187
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++I + + ++ + ++G+ LG+ FQ+ DD++D E GK D
Sbjct: 188 AVICELDKATQETVYAFGLRLGLLFQIQDDIIDATLSAEEAGKPTQNDGHKNSFVNL 244
>gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 291
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
+ + V + + + V Y I +GGKR+RP L L L
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESL 54
>gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999]
Length = 292
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 5/224 (2%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
++++ + V + S D ++ +++Y S G R +++L + L R
Sbjct: 5 SIIKNHIGDALALVQHNMSTIDESHDDRLLSQMIQYHGTSQGNATRALISLYASDALHLR 64
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ V A +E +HTA+L+HDD+ D RRGK + +G ++ GDF LS+A+
Sbjct: 65 QQDAVAAASIVETLHTASLIHDDIQDREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSH 124
Query: 121 VIETKSQEALEA----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
+ ++ + G+ ++ + +++ I +L A
Sbjct: 125 CADISQPTQIQRLIQLVHQSITQTISGQTSDITSTDIRTTSQDYETIAINKSGPLLGLAL 184
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
L + + +K +++Q+VDD+ D + + +
Sbjct: 185 RIPLLLAGYDDDETQVWMKQCIEPFALSYQIVDDLFDTQIDAEQ 228
>gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d]
Length = 303
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 91/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A +IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 344
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 76/327 (23%), Positives = 127/327 (38%), Gaps = 26/327 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATALMLEYRG 61
E V + + + + ++ Y + S GK +R L + A
Sbjct: 23 ELVAPALAEAVGGMHPWMREMADYALGRGAAGGAPAAHSQGKGVRQALAVLGAEAAGGPA 82
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+ V A A+E +HT +LLHDD++D A+RRG+ A +G +VL GD L + A +
Sbjct: 83 EAGVPAAVAVELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDALFALAVQTL 142
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLD-----VTEEDYLHVIKSKTAVLFSAA 176
+ A LS L G+ L + V+ +Y + + KT L A
Sbjct: 143 TTASAPGAAHRLSAALGDLVRGQADDLLFAHRPWTGPEAVSVAEYEAMAEHKTGSLLGCA 202
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L + + +AG L G +LG+AFQ+VDD+L G+ GK + D R GK T
Sbjct: 203 LALGAHLAGAPEETAAVLDRTGRHLGVAFQIVDDLLGIWGDPAVTGKPVHGDLRQGKKTF 262
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
PV+ A + + + +A ++ + A + A
Sbjct: 263 PVLAALATPSGSALEGLLTA-----RDDTAVVRAAAVVEQAGGRSAALREARRHLTVAHG 317
Query: 297 SLRCL-----PDSSWKKSLMEVVDFCL 318
L + P + + L + +
Sbjct: 318 LLASVQPAPRPAADLRTLLSALSRRTI 344
>gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
Length = 293
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 13 EKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
+++ + I + + Y + GG R+RP + ++ A+
Sbjct: 5 DRIEATMTAAIAQGQGGVAPPKLAAALNYAVTPGGARIRPTILMSVAMACGDDRPALTNA 64
Query: 68 ACAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A A E +H A+L+HDD DD+ +RRGK A + +VL GD L+ F
Sbjct: 65 AAAALELVHCASLVHDDLPCFDDADMRRGKPALHRAFSEPLAVLAGDSLIIMGFH 119
>gi|331236250|ref|XP_003330784.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309309774|gb|EFP86365.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 403
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 50/304 (16%), Positives = 103/304 (33%), Gaps = 41/304 (13%)
Query: 21 KRICSDVE--------MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+R+ + ++ + YL + GK +R M+ A L + ++ +
Sbjct: 118 ERMKQNNPDWSEPQERILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVG 177
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+HTA+LL DDV D S LRRG A ++G ++ +++ A+ + + A
Sbjct: 178 LLHTASLLMDDVEDGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDSSA 237
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+L + + ++A
Sbjct: 238 SNLWKLI-----------------------------NETGGLFRIAIKLMMAMSPLQQIP 268
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+GI FQ+ DD+L+ + K ED GK + P++ A + +
Sbjct: 269 DYVPLVDLIGIIFQIRDDLLN-LSSDYTVNKGFCEDLTEGKFSFPIVHAIR--ADPSNHQ 325
Query: 253 WKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+ + A M+ + ++ T +A + L D+ +S+
Sbjct: 326 LLNVLRQRPTDDGIKSYAVSYMKEKTKSFAYTRLVLGILEAQADKEVARLGDNPALRSIF 385
Query: 312 EVVD 315
++
Sbjct: 386 SMMH 389
>gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 286
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 12 MEKVNFLILKRI---CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNH 64
+E + + + D + ++ +GGKR RPML L+ + + +
Sbjct: 5 LETFENYLKSNLPVSKTFHPHFEDALSLMLDAGGKRFRPMLLLSV---VNSKNSLLIKSA 61
Query: 65 VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+ +A +E +HT +L+HDD+ LRRG + T++LVGD L ++AF +
Sbjct: 62 LPVALGLEMLHTYSLVHDDLPAMDDATLRRGFETLHKKYDEVTAILVGDALNTEAFNKIA 121
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH------VIKSKTAVLFSAA 176
++ + + G + E L + KTA L + +
Sbjct: 122 NAPLSSDVKIECIKVLSSDGGIDGMIIGQAIDCFFENQKLELSQLEFLHIHKTAKLIAGS 181
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
L++ ++IA ++++ L ++G+++G+ FQ+ DD+LD E GK D
Sbjct: 182 LKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQDDILDETQSSLEAGKTTHNDEAKNSFVN 241
Query: 237 P 237
Sbjct: 242 L 242
>gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1]
gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 291
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 21/234 (8%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
KV + + + D ++Y + GGKR+RP+L A + D + A
Sbjct: 9 SKVEKKLRDSLGDFGNTQGGLRDPIEYALLGGGKRVRPLLVGLFAEGIHKERD-VLDTAI 67
Query: 70 AIEFIHTATLL--HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE+IHT+TL+ +DD +RRGK + + +++L L+ A+ + +
Sbjct: 68 AIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKA 127
Query: 128 EALEALSLVACTLAEGEL---------------RQLSLSKNLDVTEEDYLHVIKSKTAVL 172
A ++ Q D ++E+ L +IK KT L
Sbjct: 128 LKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDVFFHDFSKENVLGIIKKKTGAL 187
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
F A L G + + + + G+ FQ+ DD+ D + E
Sbjct: 188 FEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEEKHMNY 241
>gi|121308574|dbj|BAF43673.1| geranyltranstransferase [Vibrio fischeri]
Length = 106
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L +++A Q A ++L +P + ++ + ++R N
Sbjct: 65 GLEGAKHKAEQLYQTAIEALNDIPYN--TDAMQAFAQYVIERKN 106
>gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii
ATCC 12478]
Length = 370
Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 91/282 (32%), Gaps = 22/282 (7%)
Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101
GK LR L + A ++E +H LL DDV+D S+ RRG A +
Sbjct: 67 GKCLRSTFMYLGWLCGAAPSRAALSAAASLELLHAFALLQDDVMDRSSQRRGSPAVHVQL 126
Query: 102 GNQT----------------SVLVGDFLLSQAFCM--VIETKSQEALEALSLVACTLAEG 143
++L+GD L A M +++ + E
Sbjct: 127 AEWYRLRGLSGPAGRFGESAAILLGDVCLIWAEQMLRESGVEARRLQQLWPRYDAMRIEL 186
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS----YGM 199
+ Q + N V+ + + + + YG
Sbjct: 187 AVGQFADLANDIRDRPSLRTVLDIARRKSGNYTVRRPLEMGAAMADCDDRTLTQLGLYGA 246
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
++G AFQL DD+L G GK G D + K T V+ A + + + +
Sbjct: 247 DVGEAFQLRDDLLGVFGPPATTGKPNGGDLLDRKATSVVVAAHEMADQSARRELAELVRA 306
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ L + ++ A E +A++ L +
Sbjct: 307 DHLDDAALDRFRAVIIATGAAQRIEGMIRRRVDRARNVLDHI 348
>gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 281
Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ LI + + S+ + + D+ Y++ GKR R L + + L + A AIE
Sbjct: 14 IDKLIEQFLNSNRDWDLVDISTYILKD-GKRFRGTLNMFFTVALGGDIKDSYGGALAIEI 72
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L DD+VD RRG AA +++GN+ + + ++L+ A ++ + +AL
Sbjct: 73 LHSASLALDDIVDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTS 132
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
+ + G LR + + DY+ I+ KT LF + +S+ + +Q
Sbjct: 133 IELWKDTSVGALRDMYDNN-------DYIRTIELKTGSLFKLSTVLSAYA-SKHYNTKQQ 184
Query: 194 LKSYGMNLGIAFQLVDDVLDY 214
+ G LGI +Q++DD +DY
Sbjct: 185 MLDVGKYLGIIYQIIDDFVDY 205
>gi|157167319|ref|XP_001660253.1| candidate tumor suppressor protein [Aedes aegypti]
gi|108882898|gb|EAT47123.1| candidate tumor suppressor protein [Aedes aegypti]
Length = 453
Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 9/118 (7%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
+G +L +A+Q D+ + G + +L + +
Sbjct: 339 FGKHLSLAWQACIDMEPFSSPNLTTGG---------RFSLISAPVLFHLEHDPTLYEEIK 389
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + K + + L T + A L LP S + +L ++
Sbjct: 390 KGRESVDNIDYAKIHSEVIKGPGLEKTRNLQKKHSLAAMAVLNELPPSDARTALQNII 447
>gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
Iowa II]
gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
Iowa II]
Length = 466
Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 37/341 (10%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR----PMLTLATALMLEYRGD-----N 63
+ + +L+ I ++ + D+VKY+ S GK R L + +
Sbjct: 124 DLLQSQLLEFIPNE---MKDIVKYVFQSEGKLTRQNYLSALVGLLKFAIGVNHSQPIGLD 180
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H +L +I+ IH+A+LLHDD++D+S +RRGK A ++GN+ ++L+GD+L S++ +
Sbjct: 181 HRMLIHSIQLIHSASLLHDDILDNSEIRRGKKAPYKIFGNKKTILLGDYLFSKSCLNISI 240
Query: 124 TKSQEALEALSLVACTLAEGELRQLS--------------------LSKNLDVTEEDYLH 163
++ A++ +S++A L +GE QL+ + + Y
Sbjct: 241 IENINAMKCISIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKYLLKSYYKT 300
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG--EVNEM 221
+ + L + ++ + G+N G+AFQL+DD+LD+
Sbjct: 301 ASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFTNSISQVNS 360
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK D + G T+P+ R +R +T E LK I+ + ++
Sbjct: 361 GKPFFNDIKQGILTIPIYFLLLRDQERATKILVNTNFYNSDKAEILKDLVNILFDTNSIQ 420
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSS---WKKSLMEVVDFCLQ 319
+ Y ++ + + S + L+++ D L+
Sbjct: 421 ASIVCVAQYLERYIHFINLISKSERNVFSSFLVKMADKLLK 461
>gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126]
gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126]
Length = 290
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 10 KDMEKVNFLILKR-------ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-G 61
+ K++ I + SD + + Y + SGGKR+RP++ L
Sbjct: 2 SKLNKIDAAIRDYYQKRNIPVSSD---LITAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58
Query: 62 DNHVLLACAIEFIHTATLLH 81
+H +A ++E IHT +L+H
Sbjct: 59 PSHFDVAASLEMIHTGSLIH 78
>gi|323306067|gb|EGA59801.1| Coq1p [Saccharomyces cerevisiae FostersB]
Length = 285
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
>gi|207347806|gb|EDZ73868.1| YBR003Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 256
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
>gi|403318|emb|CAA81272.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae]
gi|1582566|prf||2118405G hexaprenyl pyrophosphate synthetase
Length = 285
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP 47
L K+M + I+ I S ++ V Y + GK++RP
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
>gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99]
gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99]
Length = 303
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRG---- 61
+ E+ + + + ++ +GGKR RP L LA ++ +
Sbjct: 11 NECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQ 70
Query: 62 -DNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D++ LRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
Length = 291
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVVIQPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
Length = 291
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVVIQPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71]
gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71]
Length = 269
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 51/306 (16%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV--LLACAIEFIHTATLLH-- 81
+ + D Y + GKRLRP L A+A + A AIE IHT +L+H
Sbjct: 2 NPTRLNDARSYSLNIPGKRLRPQLLEASARATGNDRAEALAGPSAEAIELIHTYSLIHDD 61
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
+DD LRRG+ + + T++LVGD L ++AF ++ + + L+A
Sbjct: 62 LPAMDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIANDDELSTEQRVRLIARLAK 121
Query: 142 EGELRQLSLSK-------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194
+ + N D++ +D ++ KT L +AAL + ++ ++ L
Sbjct: 122 AAGFDGMVGGQGLDIEATNKDLSLDDLKNIHALKTGALITAALVMGGIVGNATDAQLATL 181
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254
++ G +G+AFQ++DDV+D R + + +GK G+D GK T ++
Sbjct: 182 ETVGEKIGLAFQIIDDVIDVRSDSSTLGKTAGKDAAAGKTTYVALM-------------- 227
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ + A +A + S+ SL ++
Sbjct: 228 ------------------------GVETAQTLAMELYDEALALIADWDSSA--DSLRALL 261
Query: 315 DFCLQR 320
++R
Sbjct: 262 GKMVKR 267
>gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
Length = 281
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ LI + + S+ + + D+ Y++ GKR R L + + L + A AIE
Sbjct: 14 IDKLIEQFLNSNRDWDLVDISTYILKD-GKRFRGTLNMFFTVALGGDIKDSYGGALAIEI 72
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L DD+VD RRG AA +++GN+ + + ++L+ A ++ + +AL
Sbjct: 73 LHSASLALDDIVDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTS 132
Query: 134 SLVACTLAEGELRQLSLSKNL 154
+ + G LR + + +
Sbjct: 133 IELWKDTSVGALRDMYDNNDY 153
>gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides]
Length = 288
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 5/221 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A A A+E IH A+L+H
Sbjct: 20 GSEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPVLSDAAAVALELIHCASLVH 79
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + + AL LV
Sbjct: 80 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTAL 139
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 140 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 198
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G AFQ+ DD+ D + +GK G+D + +P
Sbjct: 199 RIGEAFQVADDLRDALCDAETLGKPAGQDEIHARPNAVREY 239
>gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901]
Length = 291
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae
INV104]
Length = 291
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVTIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVATALEMIHTGSLIH 79
>gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A]
Length = 303
Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ ++ + + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECKRFESFLNHHHLHLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D++ALRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334]
gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334]
Length = 291
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 107/280 (38%), Gaps = 13/280 (4%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVQSALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVWGNQTSVLVGDFLLSQ 116
+A A+E IHT +L+HDD+ A + L L++Q
Sbjct: 64 QVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQ 123
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
A A +L+ + + G++ + ++ E+ + +KT L +
Sbjct: 124 ADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEH-QHLSLEELQTIHANKTGKLLAYP 182
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ +++IA + +++ LK+ G +G+AFQ+ DDVLD E+GK +D K T
Sbjct: 183 FQAAAIIAELAPEMQEKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLHAEKSTY 242
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276
P +L + + + + +
Sbjct: 243 PALLGLEEAIIFCNQTLDQANAKLDDIAQQVPFEIESIVK 282
>gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 289
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLH 81
+ + + Y + +GGKR+RP++ L D H +A A+E IHT +L+H
Sbjct: 23 PDLIESILYSVDAGGKRIRPLIFLELLEGFGISLTDAHYDVAAALEMIHTGSLIH 77
>gi|258574603|ref|XP_002541483.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901749|gb|EEP76150.1| predicted protein [Uncinocarpus reesii 1704]
Length = 290
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 12/259 (4%)
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ + + +L+ DDV DDS LRRG AA +V+G ++ + L + + + +
Sbjct: 30 IQSIGQDMVDISLMLDDVQDDSELRRGSPAAHVVYGRSQTINSAIYSLMKVADRLGQLQD 89
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
++ + + L G+ L +++ + F + +
Sbjct: 90 EKCRDIFYEESRNLCVGQGLDLHWRQHVQCPSIQEYITMVDNKTGSFFRLVTRLVVAETA 149
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
+ L + LG +Q+ DD + E K +D GK +LP+I Q
Sbjct: 150 EPPNSVNLFQFITLLGRYYQIRDDYQNLASEEYTTKKGFCDDLSEGKFSLPMIHFLQNAP 209
Query: 247 KRE-------KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299
+ + + + +++ + M++ +L + +
Sbjct: 210 SKTVDQARGLIFHGIDSDSKRPLDLDSKRWILSEMKKAGSLEYSYNVLKDMHEAMSTMFS 269
Query: 300 CLPD-----SSWKKSLMEV 313
L S K L+ +
Sbjct: 270 DLEAELGESSKLKTFLLRL 288
>gi|302421550|ref|XP_003008605.1| geranylgeranyl pyrophosphate synthetase [Verticillium albo-atrum
VaMs.102]
gi|261351751|gb|EEY14179.1| geranylgeranyl pyrophosphate synthetase [Verticillium albo-atrum
VaMs.102]
Length = 151
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 2/121 (1%)
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
++ G+ FQ+ DD ++ + K + ED GK + PVI + +
Sbjct: 17 MQAESRRHVDCVPLVNVFGLVFQIRDDYMNLNSKEYSNNKGMCEDLTEGKFSFPVIHSIR 76
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + VE + A M + T +A+ + + +
Sbjct: 77 T--DPGNLQLINILGQKTSDVEVKRYAVSFMERTGSFEYTRQVIDVLIARARKLVSEIDE 134
Query: 304 S 304
S
Sbjct: 135 S 135
>gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum]
Length = 386
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 28/227 (12%)
Query: 12 MEKVNFLILKRICSDVEMIP-------DVVKYLI-------FSGGKRLRPMLTLATALML 57
+V + + V ++ ++ K S GKR+R +L + + L+
Sbjct: 10 FREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLVVLSYLVF 69
Query: 58 EYRGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ D+ L+ +E +H L+ DD++D+S LRRG+ L N L+G
Sbjct: 70 RNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHLTQANLNRGLIG 129
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ SL L N+ + I KT
Sbjct: 130 IN-------DGLHLVLSAKYVIHSLFFQYQDTVNLHMWKDQNNVCLKLCKLFDEISYKTC 182
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ S+ + + + V + + +
Sbjct: 183 SGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKT 229
>gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25]
gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25]
gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A]
gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4]
Length = 281
Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 15 VNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73
++ LI + + S+ + + D+ Y++ GKR R L + + L + A AIE
Sbjct: 14 IDKLIEQFLNSNRDWDLVDISTYILKD-GKRFRGTLNMFFTVALGGDIKDSYGGALAIEI 72
Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
+H+A+L DD+VD RRG AA +++GN+ + + ++L+ A ++ + +AL
Sbjct: 73 LHSASLALDDIVDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTS 132
Query: 134 SLVACTLAEGELRQLSLSKNL 154
+ + G LR + + +
Sbjct: 133 IELWKDTSVGALRDMYDNNDY 153
>gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 368
Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 99/271 (36%), Gaps = 21/271 (7%)
Query: 32 DVVKYLIFSGGKR--------LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ +Y GK LRP L + +L + + ++L+ DD
Sbjct: 77 EPFEYTRSLPGKNTVGKVIESLRP--------WLNISDRSAAVLTDVMTMLQNSSLMLDD 128
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG AA + +G ++ +++++ V E + LS TL G
Sbjct: 129 IEDGSQLRRGAPAAHVKYGLSQTINSTTYIIAKIVSDVQTHLRPECAKVLSEELQTLTLG 188
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L+ + N + ++ L + + + L+ LG
Sbjct: 189 QALDLNWTFNKKCPSVNEY-LVMIDHKTGGFFRLMLRIMEIEANATPNDELRHLITLLGR 247
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK----REKNFWKSTIND 259
+Q+ DD + + K +D GK + P+I + + F + +++
Sbjct: 248 YYQIRDDYQNLASDEYTAKKGFCDDLSEGKFSFPLIHLLEHSPNASTLHQMIFGRQPVDE 307
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSY 290
G++S E M+E +L T+ S
Sbjct: 308 GEMSEETKSYIISQMKEVGSLDYTQDVLKSL 338
>gi|330903723|gb|EGH34295.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 89
Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++ A +A +L + + L ++ + ++R +
Sbjct: 48 GLEAAKHYALELRDQALQALSPFD--AAAEPLRQLARYIVERRH 89
>gi|320037302|gb|EFW19239.1| geranylgeranyl pyrophosphate synthase [Coccidioides posadasii str.
Silveira]
Length = 731
Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 23/286 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLR-----PMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+ DV + +YL K R + T + + ++ ++ +H+
Sbjct: 423 ELSDDVVL--QPYRYLTSLPSKGFRDQAIDSLNTWL-----KVPQKSAKMIKSIVKMLHS 475
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+ DD+ DDS LRRG+ + ++G ++ + +A M E + L
Sbjct: 476 ASLMLDDIEDDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIEE 535
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV--LFSAALEVSSLIAGVQNSVRQAL 194
L G+ L + N + + + + AL
Sbjct: 536 MQQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRLMVAESPVREKVSDDAL 595
Query: 195 KSYGMNLGIAFQLVDDVLD--YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G FQ+ DD + + G D TL + +
Sbjct: 596 NLLSCLVGRFFQIRDDYQNLASADYAKQKGFAEDLDEGKLSFTLIHCIRTVESEPKFAGD 655
Query: 253 WKSTIN-------DGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
DGK+S+E ++ M++ ++L T
Sbjct: 656 AMQLRAFLMKRRLDGKLSIEAKREVLATMKKTKSLDYTLDVLRELH 701
>gi|34499413|ref|NP_903628.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
gi|34332897|gb|AAQ61620.2| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
Length = 379
Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 58/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)
Query: 14 KVNFLILKRICS--------DVEMIPDVV---KYLIFSGGKRLRPMLTLATALMLEYRGD 62
+++ I I S +I V ++ + GKR+ + L D
Sbjct: 11 RIDECIAAAIESLREDGPERGHPLIGRVYGWLRHYLDCDGKRMHGIAAALAHLACGGGED 70
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT------SVLVGDFLLSQ 116
+ +A A++ H TL+HDD+ D+ A RRG + VG
Sbjct: 71 AILPVAAAMQLYHHHTLVHDDIYDEDAARRGWPTVHQAFAGWFADRRGSEEGVGRVFSGG 130
Query: 117 AFCMVIETKSQEALEAL------------------------SLVACTLAEGELRQLSLSK 152
A T +L+ +
Sbjct: 131 AMRRGAITAFAYGKICRALAGRLLLESGFDQAAVLDVARALERHEFFDNAAQLKDVFHEG 190
Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212
+ + + L KT LF + +AG + +AL+ + +A+QL DD+
Sbjct: 191 DEMPSPQACLDNAWLKTGRLFELCAYAGARLAGAEAGRTKALERWAGQSALAYQLQDDLE 250
Query: 213 D-YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271
D G+ + D + KPT LA + G + +
Sbjct: 251 DLNAASEKGQGRGVATDLLHCKPTYLYALAKTMA-EGRDRDALLAWQSGAQAGLDSGDII 309
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK---SLMEVVDFCLQ 319
I+ + AL +A +L + L + D+ +
Sbjct: 310 AILARSGALDACGGEVARCIARAGAALDGAVPALAADRLPLLRQFSDYFVS 360
>gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum]
Length = 386
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 28/227 (12%)
Query: 12 MEKVNFLILKRICSDVEMIP-------DVVKYLI-------FSGGKRLRPMLTLATALML 57
+V + + V ++ ++ K S GKR+R +L + + L+
Sbjct: 10 FREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLVVLSYLVF 69
Query: 58 EYRGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110
+ D+ L+ +E +H L+ DD++D+S LRRG+ L N L+G
Sbjct: 70 RNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHLTQANLNRGLIG 129
Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170
+ SL L N+ + I KT
Sbjct: 130 IN-------DGLHLVLSAKYVIHSLFFQNQDTVNLHMWKDQNNVCLKLCKLFDEISYKTC 182
Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+ S+ + + + V + + +
Sbjct: 183 SGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKT 229
>gi|303314115|ref|XP_003067066.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106734|gb|EER24921.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 731
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 23/286 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLR-----PMLTLATALMLEYRGDNHVLLACAIEFIHT 76
+ DV + +YL K R + T + + ++ ++ +H+
Sbjct: 423 ELSDDVVL--QPYRYLTSLPSKGFRDQAIDSLNTWL-----KVPQKSAKMIKSIVKMLHS 475
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A+L+ DD+ DDS LRRG+ + ++G ++ + +A M E + L
Sbjct: 476 ASLMLDDIEDDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIEE 535
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV--LFSAALEVSSLIAGVQNSVRQAL 194
L G+ L + N + + + + AL
Sbjct: 536 MQQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRLMVAESPVREKVSDDAL 595
Query: 195 KSYGMNLGIAFQLVDDVLD--YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
+G FQ+ DD + + G D TL + +
Sbjct: 596 NLLSCLVGRFFQIRDDYQNLASADYAKQKGFAEDLDEGKLSFTLIHCIRTVESEPKFAGD 655
Query: 253 WKSTIN-------DGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
DGK+S+E ++ M++ ++L T
Sbjct: 656 AMQLRASLMKRRLDGKLSIEAKREVLATMKKTKSLDYTLDVLRELH 701
>gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
Length = 277
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLL 80
++ S D + +++ +GGK R L L L+ + +A A+E +HT +L+
Sbjct: 13 KVDSFHPHFNDSLSWVLKAGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVEMLHTYSLI 72
Query: 81 HDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------VIETKSQEALEA 132
HDD +D++ LRRG + + ++VL GD L + AF M E +
Sbjct: 73 HDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYMLSSANLPAEAVVKCVQTL 132
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+N + ++ + KT L +A++++ ++I+ + +
Sbjct: 133 AENGGIYGMVIGQAIDCYFENKHLNLDELKFLHLHKTGALIAASMKMGAIISAQSDKQCE 192
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
+ + G+ LG+AFQ+ DD++D + + GK + D T +
Sbjct: 193 KIYNIGLKLGLAFQIHDDIIDATSDEMKAGKTVNNDLFKNSFTNLM 238
>gi|291449814|ref|ZP_06589204.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
albus J1074]
gi|291352763|gb|EFE79665.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
albus J1074]
Length = 209
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
SGGK LR L + +A + G + A A+E +HT +LLHDD++D LRR + A
Sbjct: 81 SGGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDIMDGDPLRRRRPAVWR 140
Query: 100 VWGNQTSVLVGDFLLSQAFC 119
+G +VL GD L + A
Sbjct: 141 AYGVGPAVLAGDALHALAVQ 160
>gi|239977900|ref|ZP_04700424.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 312
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
SGGK LR L + +A + G + A A+E +HT +LLHDD++D LRR + A
Sbjct: 81 SGGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDIMDGDPLRRRRPAVWR 140
Query: 100 VWGNQTSVLVGDFLLSQAFC 119
+G +VL GD L + A
Sbjct: 141 AYGVGPAVLAGDALHALAVQ 160
>gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1]
gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1]
Length = 357
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 82/324 (25%), Positives = 133/324 (41%), Gaps = 28/324 (8%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI---------FSG--GKRLRPMLTLATA 54
L + + VN + + + S + V Y +G GK +RP L LA A
Sbjct: 17 ALLERTRDAVNPELRRTVESLPGSMRRVAMYHFGWEHADGTPAAGNAGKAIRPALVLAAA 76
Query: 55 LMLEYRGD-----------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
L D V A A+E H TLLHDDV+D RRG+ A V+G
Sbjct: 77 RALRGPADTGDGDGDDGLRAVVRAAVAVELAHNFTLLHDDVIDKDVRRRGRATAWTVFGT 136
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQLSLSKNLDVTEED 160
+++ GD +L+ A ++ + + A + L G+ + + DV+ ++
Sbjct: 137 PDAIITGDAMLALALRLLAQDGHPASAAASARLATCIIELCAGQQADCAFEQRPDVSLDE 196
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
L + +KT L A + +L AG A+ ++G G+AFQL+DD++ G+
Sbjct: 197 CLTMAMAKTGALLGCACALGALYAGAGPDEVDAMDAFGREAGLAFQLIDDLIGIWGDPGH 256
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
GK G D K +LPV+ A GT K G ++ +++ A +
Sbjct: 257 TGKPAGADLIARKKSLPVVAALTSGTTAGKELAALY--AGPMTGDDVHAAAAAVERAGGR 314
Query: 281 VDTEYRAYSYGQKAKDSLR-CLPD 303
+ A +A L +PD
Sbjct: 315 DWAQAHAADRMGRAVQQLSRAVPD 338
>gi|254410383|ref|ZP_05024162.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196182589|gb|EDX77574.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 324
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 85/268 (31%), Gaps = 10/268 (3%)
Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+L LA+ + + ++ A + A + DD+ D +
Sbjct: 55 AILPLASCAAVGGNPQEAIPVSAAWVVLSLAMRILDDLQDQDRPDALWATIG--LARSFN 112
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+ L + + T Q +NL +T EDY H I+
Sbjct: 113 FSAALYALCNELLAQAAWTPELYRVINQHFSQTGLHLLKGQDRDLRNLTLTIEDYWHTIE 172
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
K A F A L + A + +G +LG+A QL DD G++
Sbjct: 173 EKNASAFVLACTAGGLCGPDNPKLLDACRRFGYHLGLALQLFDDF------EGIWGQSGR 226
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286
D GK TLPVI R K D + ++ I+ + +
Sbjct: 227 GDLVMGKITLPVIYGLNVAHNRRDELQKLI--DDASLAKESERIREILDQINTRDFMIWT 284
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
A +KA +L P +L V
Sbjct: 285 ALQERKKAVAALEPCPGQQGVTALTAYV 312
>gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus P2]
gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus 98/2]
gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus P2]
gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2]
Length = 281
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++E ++ LI + + S+ + + D+ Y++ GKR R L + + L
Sbjct: 1 MSIIEFWLEAK-ATIDRLIEQFLNSNRDWDLVDISSYILKD-GKRFRGTLNMFFTVALGG 58
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE +H+A+L DD+VD A RRG AA +V+GN+ + + ++L+ A
Sbjct: 59 DIKDSYGGALAIEILHSASLALDDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALR 118
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
++ + +AL + + G LR + + +
Sbjct: 119 IIQTSYGDDALNTSIELWKDTSVGALRDMYDNSDY 153
>gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
Length = 289
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD-- 83
+ D + Y GG R+RP + ++ A+ + A A+E +H A+L+HDD
Sbjct: 24 PARLADALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDDLP 83
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
DD+ LRRGK + + +VL GD L+ +F ++ +A A +L+
Sbjct: 84 CFDDADLRRGKASVHRAYSEPLAVLTGDALIIMSFEILARVAHHDAGRATALILALARRS 143
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + +E + + + + + + A + G +G
Sbjct: 144 GMPNGICAGQGWESEPKVDLEAYHR-SKTGALFIAATQMGAIAAGHEPEPWYELGARIGA 202
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
AFQ+ DD+ D + +GK +G+D +G+P
Sbjct: 203 AFQVADDLRDALLDAETLGKPVGQDDLHGRPNAV 236
>gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
Length = 291
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVVIQPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 288
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + + + + ++ +F G R+RP L + AL A
Sbjct: 6 RIERALTEALNQADMAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D + LRRG+ + +G +VL GD ++ AF
Sbjct: 66 GAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQ 119
>gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 303
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 14 KVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ ++L I + + ++ +F GG R+RP L LA A A
Sbjct: 6 RIERVLLAAIEPLSSPASPPGLLAATQHAVFPGGARIRPRLCLAVASAYGDPAPEAADAA 65
Query: 69 CAI-EFIHTATLLHDDVVDDSA 89
A E IH A+L+HDD+
Sbjct: 66 AAAVELIHCASLVHDDLPCFDD 87
>gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris
CGA009]
Length = 288
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + + + + ++ +F G R+RP L + AL A
Sbjct: 6 RIERALTEALNQADMAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D + LRRG+ + +G +VL GD ++ AF
Sbjct: 66 GAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQ 119
>gi|148700812|gb|EDL32759.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Mus musculus]
Length = 153
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVI 165
E+ +
Sbjct: 131 YWRDTYTCPTEEEYKAM 147
>gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88]
Length = 693
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 18/310 (5%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+++ + YL K +R + A L L + I +H ++LL DD+ D
Sbjct: 384 YKVLQQPINYLRSVPSKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDIQD 443
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146
+S LRRG+ A V+G ++ L+QAF S + A ++ C L E +
Sbjct: 444 NSELRRGRPTAYRVFGVAQTINAATHALTQAFEKAPHMGSSVSSPARMVMVCLLIEVDEL 503
Query: 147 QLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQAL 194
+ DYL + + KT LF A + + + + L
Sbjct: 504 RNLHVGQAMDLHWTRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIKQTDL 563
Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNF 252
++LG FQ DD ++ + K +D GK +LP+I + +N
Sbjct: 564 SDLMISLGQYFQARDDYINLASTKYQEQKGFAQDLDEGKLSLPLIHLLTQSPNAALIENI 623
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ GK+S + + MR + L TE K L L SS +
Sbjct: 624 QQERARHGKLSADLKQLILDEMRNEKILQLTEETLNGLEAKVFRHLERLEVSSG---IKN 680
Query: 313 VV-DFCLQRL 321
F L RL
Sbjct: 681 FTFRFLLDRL 690
>gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 297
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y + G AFQL DD+L G+ GK +D R GK T+ V LA + T +++ +
Sbjct: 171 YALPAGEAFQLADDLLGVFGDPRRTGKPDLDDLRGGKHTVLVALAREHATPEQRHTLDTL 230
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVV 314
+ + + + ++ A + E +A +L LP ++L +
Sbjct: 231 LGTPGLDRQGASRLRCVLVATGARAEAERLITERRDQALTALNALTLPP-PLAEALARLT 289
>gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 355
Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y + G AFQL DD+L G+ GK +D R GK T+ V LA + T +++ +
Sbjct: 229 YALPAGEAFQLADDLLGVFGDPRRTGKPDLDDLRGGKHTVLVALAREHATPEQRHTLDTL 288
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC--LPDSSWKKSLMEVV 314
+ + + + ++ A + E +A +L LP ++L +
Sbjct: 289 LGTPGLDRQGASRLRCVLVATGARAEAERLITERRDQALTALNALTLPP-PLAEALARLT 347
>gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
Length = 295
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 7 LTLKDMEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ + ++ V I K+I + + + Y + +GGKR+RP+L L
Sbjct: 2 ILEEKLQGVEKEIEGFYEAKQIA---PRLVESILYSVRAGGKRIRPLLLLELLEAFHAPI 58
Query: 62 -DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ H +A A+E IHT +L+HDD+ +D+ RRG++ +G ++L GD L AF
Sbjct: 59 LEAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDSLFLDAF 118
Query: 119 CM 120
Sbjct: 119 GC 120
>gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
Length = 291
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 9 LKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65
+ + V + + + V Y I +GGKR+RP L L L+ H
Sbjct: 4 QEKLALVELALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLGVLEALQVAIKPAHA 63
Query: 66 LLACAIEFIHTATLLH 81
+A A+E IHT +L+H
Sbjct: 64 QVAAALEMIHTGSLIH 79
>gi|75145468|sp|Q7XYS8|CHRDS_ARTSI RecName: Full=Monoterpene synthase FDS-5, chloroplastic; AltName:
Full=Chrysanthemyl diphosphate synthase; Short=CPP
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Lavandulyl diphosphate synthase; Short=LPP
synthase; Flags: Precursor
gi|32329201|gb|AAP74721.1| chrysanthemyl diphosphate synthase [Artemisia spiciformis]
Length = 394
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 94/322 (29%), Gaps = 28/322 (8%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---------EMIPDVVKYLIFSGGKRLRPMLTLAT 53
L +V + + D + + ++ Y + GGK +R + +
Sbjct: 52 TLSSNLNSQFMQVYETLKSELIHDPLFEFDDDSRQWVERMIDYTV-PGGKMVRGYSVVDS 110
Query: 54 ALMLEYRGDN------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG----- 102
+L+ L E+ LLHDD++D S RRG+ +
Sbjct: 111 YQLLKGEELTEEEAFLACALGWCTEWFQAFILLHDDMMDGSHTRRGQPCWFRLPEVGAVA 170
Query: 103 -NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161
N +L + ++ + G++ Y
Sbjct: 171 INDGVLLRNHVHRILKKHFQGKAYYVHLVDLFNETEFQTISGQMIDTISRLAGQKELSKY 230
Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM------NLGIAFQLVDDVLDYR 215
+ + A IA + L Y LG+ +Q+ +D LD
Sbjct: 231 SMSLNRRIVQYKGAYYSCYLPIACALLMFGENLDDYVQVKDILVELGMYYQIQNDYLDTF 290
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ N GK + L +++K ++ V +K+ + +
Sbjct: 291 GDPNVFGKTGTDIEECKCSWLIAKALELANEEQKKILSENYGIKDPAKVAKVKEIYHALN 350
Query: 276 ENRALVDTEYRAYSYGQKAKDS 297
A D E Y KA +
Sbjct: 351 LKGAYEDYETNLYENSMKAIKA 372
>gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
Length = 304
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDD-- 83
+ D + Y GG R+RP + ++ AL + A A+E +H A+L+HDD
Sbjct: 39 PARLADALDYSTSPGGARIRPTILMSVALACGDDRPELSDAAAAALEIMHCASLVHDDLP 98
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
DD+ LRRGK + + +VL GD L+ +F ++ +A A +L+
Sbjct: 99 CFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILARVAECDAARANALILALARRS 158
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + +E + + + + + + A + G +G
Sbjct: 159 GMPNGICAGQGWESEPTVDLEAYHR-SKTGALFIAATQMGAIAAGHEPEPWYELGARIGA 217
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
AFQ+ DD+ D + +GK +G+D +G+P
Sbjct: 218 AFQVADDLRDALLDAETLGKPVGQDDLHGRPNAV 251
>gi|319949998|ref|ZP_08023982.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
gi|319436340|gb|EFV91476.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
Length = 339
Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 11/126 (8%)
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+LG A+Q+VDDVL G+ GK+ D PT+ + R W
Sbjct: 221 RHLGTAYQVVDDVLGVFGDPAVTGKSNSGDLVRRAPTVLL------AYARTTGAWPRIDA 274
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKSLM-EVVD 315
S + A ++RE A A A+ +L P + +L +
Sbjct: 275 ALNRSDPDPDTARELLRECGAGEYALGIAEDLVTAARAALDS-PAIPAAVRAALEPHLAT 333
Query: 316 FCLQRL 321
L+R
Sbjct: 334 -ALERT 338
>gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H]
gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H]
Length = 522
Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 84/385 (21%), Positives = 146/385 (37%), Gaps = 76/385 (19%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-TLATALMLEYR----- 60
L ++ ++ I I +D + + + Y+ GK+ R +L L +++
Sbjct: 140 LCENKIKNIDEHIYNIIKTDYNNLDEFITYIYHYQGKKFRVILSILLKSILCYVDNVSSK 199
Query: 61 ----------------------------------------------GDNHVLLACAIEFI 74
G N + A E I
Sbjct: 200 NNFKFRNIQRNYSKSVKSTNSANNIIAKKKLAIINYASNNISKKEIGVNQCRIIAASEII 259
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
H +LLHDDV+DDS RRG +A +GN+ S+L GDFLL++A + + + +
Sbjct: 260 HMGSLLHDDVIDDSNNRRGALALHKKYGNKISILSGDFLLARASSVFASIGCPQICKRFA 319
Query: 135 LVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
V +L +GEL Q +L N + Y KTA LFS ++++ +
Sbjct: 320 YVVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLFACMAILSFKNEKIINL 379
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ G+++G+AFQL DD LDY+ + + K I D N T P + +
Sbjct: 380 CFNLGLHIGMAFQLYDDYLDYKPD-KKTNKPILNDLNNSIKTAPFLF----SYNYNPDVV 434
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL------------ 301
S IN +S ++ + +L E + + ++A D L +
Sbjct: 435 LSLINKKTLSDTDINNILFYIHSTNSLKKNELCSLLHIKRAADILISIISYCRMPKNAEK 494
Query: 302 ------PDSSWKKSLMEVVDFCLQR 320
+ +++L+ +V L R
Sbjct: 495 ANSQRNDINQSREALINLVLNILSR 519
>gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp.
(strain APS)
gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 282
Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 14 KVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N + L ++ + +KY +FSG KRLR L +T + + +++ A
Sbjct: 13 RINQKLFYTLNQLPFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTA 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
IEFIH+ +L+HDD+ +
Sbjct: 73 IEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKY 105
>gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 297
Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGG-KRLRPMLTLATALMLEYRGDNHVLLACAI 71
E++N I+K + + VKY SGG KR R +L TA + +LLAC++
Sbjct: 21 EQINQEIVKLCKNAGSKTVEQVKYHQRSGGSKR-RALLCYDTARSFNHSHQTALLLACSV 79
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
E +H A+L+HDD+ D RR + A + ++ VGD L++ A+
Sbjct: 80 ELLHNASLIHDDIQDQDMTRRDQAALWVKSSVAEAICVGDSLIAAAYM 127
>gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
Length = 289
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 12/240 (5%)
Query: 10 KDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65
++K+N I + + + ++Y +GGKR+RP+L L D+H
Sbjct: 2 DKVDKINQAITRFYQGKQAVSEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHY 61
Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----- 118
+A A+E IHT +L+HDD+ +D+ RRG++ + T++L GD L AF
Sbjct: 62 DVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAFALIAE 121
Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ K G ++ ++ D + + KT L +
Sbjct: 122 TNLSANIKVDLMHCLSHSSGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPF 181
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
++ IA V + L G+ +G AFQ+ DD+LD + +GK +D K T P
Sbjct: 182 WAAAKIADVDEEILLDLYQAGLKVGHAFQVRDDILDVTADFTNLGKTPQKDLTAEKMTYP 241
>gi|284051047|ref|ZP_06381257.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 81
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + +A ++AK L K+L + DF R +
Sbjct: 40 GLEKSRAKAEQLVEEAKAELAAFGYGG--KALAAIADFITYRSH 81
>gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 282
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 14 KVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N + L ++ + +KY +FSG KRLR L +T + + +++ A
Sbjct: 13 RINQKLFYTLNQLPFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTA 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
IEFIH+ +L+HDD+ +
Sbjct: 73 IEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKY 105
>gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
Length = 279
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 26/293 (8%)
Query: 1 MKMLE-DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
MK L K++ KV S + + ++ +GGK R L L+ +
Sbjct: 1 MKELFIHHLEKNLPKVE--------SFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKP 52
Query: 60 R-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LV 109
+ + A A+EFIHT +L+HDD+ + L +
Sbjct: 53 ELINQALDAALALEFIHTYSLIHDDLPSMDNADFRRGIPTLHKSYDETTAILVGDALNTE 112
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
+LS A A + + G+ ++ ++ + + KT
Sbjct: 113 AFLVLSHANLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKT 171
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D
Sbjct: 172 ARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIFQINDDIIDTTMSEEQSGKPTNND- 230
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
T G ++ ++ +++ + +E L + M +N +
Sbjct: 231 -----THKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNQKLAQMIQNLIIQY 278
>gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
Length = 288
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 8 TLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN 63
+ + ++ + I S V ++ +GGKR RP L L + N
Sbjct: 3 ISQILNDFESFLISQAPQIPSFHPHYEQAVWEMMKNGGKRFRPALVFCVVNALAPQLIKN 62
Query: 64 HVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--- 118
L A +IE IHT +L+HDD +D++ LRRG + ++LVGD L + AF
Sbjct: 63 AFLPALSIECIHTYSLIHDDLPCMDNAPLRRGHATLHTKYDETLALLVGDGLNTYAFALL 122
Query: 119 ---CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + + + ++ ++ ++ + +KTA L +
Sbjct: 123 SQARLDAQVRLELIHSLALNAGIGGMVLGQMLDCAFEDKKLSLQELQIIHTNKTAKLIAT 182
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+L+ ++I+ + ++ +G+ LGI FQL DD++D + + GK D
Sbjct: 183 SLQFGAIISNAKAHFASSIYEFGLKLGIYFQLRDDLIDACFDAQQAGKTTHNDIHKNSYV 242
Query: 236 LP 237
Sbjct: 243 NL 244
>gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 282
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 14 KVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N + L ++ + +KY +FSG KRLR L +T + + +++ A
Sbjct: 13 RINQKLFYTLNQLPFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTA 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
IEFIH+ +L+HDD+ +
Sbjct: 73 IEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKY 105
>gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
Length = 293
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 88/239 (36%), Gaps = 16/239 (6%)
Query: 14 KVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLA--TALMLEYRGDNHVLLA 68
+ + I ++ +GGKR RP L L+ A + + N +
Sbjct: 10 EFESYLHDNQPEISGFHPHFEKAFWEMVLNGGKRFRPNLLLSVVCAEA-KEQAKNAFDVC 68
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFC 119
+IE +HT +L+HDD+ + L +LL+ A
Sbjct: 69 LSIECLHTYSLIHDDLPAMDNAALRRNHPTLHCKYDEVSAILIGDGLNTYSFYLLANAHF 128
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ A + + G+ + + + KTA L +A+L++
Sbjct: 129 APSVVAELISCLAENGGIGGMVLGQALDCYFEH-TTLPLDKLQFIHTHKTAKLIAASLKM 187
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238
++IA + +++ L +G+ LG+ FQ+ DD++D + + GK D +
Sbjct: 188 GAIIANLSLDMQKFLYDFGLVLGLYFQIRDDIIDSIQDESISGKTANNDTNKNSYVNLM 246
>gi|254411920|ref|ZP_05025696.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196181642|gb|EDX76630.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 318
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 94/269 (34%), Gaps = 12/269 (4%)
Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106
+L LA+ ++ + + A+ + + DD+ D + +
Sbjct: 42 AILPLASCQAVDGEAKEAIHVCAALLALGLCLRILDDLEDQDRDGQLWKEVGATRA--WN 99
Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166
+LS + + + + Q T EDY ++
Sbjct: 100 YASAIHILSFEILSKASLEPKIFHKINQSYIDAFFRISVGQDRELVGTTRTVEDYWLTVE 159
Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226
K+A + A +++ + Q+ +G +LG+A Q+++D+ + +
Sbjct: 160 MKSAGFVATACATGAMVGTDNPELIQSCGVFGHHLGLALQILNDM------ESIWQPDGI 213
Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEY 285
D + GK TLP++ + ++ + E +K+ + L+
Sbjct: 214 TDLKQGKITLPLLYGLESHHSERDELLSLVTDNEIATHAERIKEILDKIDTKSFLIWA-- 271
Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
A ++A ++++ P++ ++ L +
Sbjct: 272 -ALKEREQALEAIKICPNAEGREVLESYI 299
>gi|63145969|gb|AAY33921.1| GGDP synthase [Xanthophyllomyces dendrorhous]
gi|63145971|gb|AAY33922.1| GGDP synthase [Xanthophyllomyces dendrorhous]
Length = 376
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 53/327 (16%), Positives = 100/327 (30%), Gaps = 47/327 (14%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
L+ D ++ + YL + GK +R L A L+ + ++ ++ + +HTA+L
Sbjct: 12 LEFTPQDDIVLLEPYHYLGKNPGKEIRSQLIEAFNYWLDVKKEDLEVIQNVVGMLHTASL 71
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
L DDV D S LRRG A L++G ++ +++ A+ + + + + +
Sbjct: 72 LMDDVEDSSVLRRGSPVAHLIYGIPQTINTANYVYFLAYQEIFKLRPTPIPMPVIPPSSA 131
Query: 140 --------------------------------------------LAEGELRQLSLSKNLD 155
+ Q D
Sbjct: 132 SLQSSVSSASSSSSASSENGGTSTPNSQIPFSKDTYLDKVITDEMLSLHRGQGLELFWRD 191
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
++ + ++ + I FQ+ DD ++ +
Sbjct: 192 SLTCPSEEEYVKMVLGKTGGLFRIAVRLMMAKSECDIDFVQLVNLISIYFQIRDDYMNLQ 251
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
KN ED GK + P I + +T+ S E L MR
Sbjct: 252 SSEYAHNKNFAEDLTEGKFSFPTIHSIH--ANPSSRLVINTLQKKSTSPEILHHCVNYMR 309
Query: 276 -ENRALVDTEYRAYSYGQKAKDSLRCL 301
E + T+ + + L L
Sbjct: 310 TETHSFEYTQEVLNTLSGALERELGRL 336
>gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 288
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + + + + ++ +F G R+RP L + AL A
Sbjct: 6 RIERALTEALNQADMAGCPPRLAAAMRGAVFPRGARVRPRLCHSVALACGEDNPGITEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D + LRRG+ + +G +VL GD ++ AF
Sbjct: 66 GAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQ 119
>gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 137
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
L +A + A+ SL L S +L + ++ +QR
Sbjct: 93 GLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQR 135
>gi|213028306|ref|ZP_03342753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 117
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
L +A + A+ SL L S +L + ++ +QR
Sbjct: 73 GLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQR 115
>gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
Length = 289
Score = 45.3 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 18/250 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
M+ + ++ +L + I S + V ++ +GGKR RP L + L
Sbjct: 1 MQHITEILHD----FESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNAL 56
Query: 58 EYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV--------- 107
+ N L A +IE IHT +L+HDD+ + L ++
Sbjct: 57 APQLVKNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLN 116
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
LL+QA + A++ + G++ + E + +
Sbjct: 117 TYAFALLAQARLDSQLKLALIESLAINAGIGGMVLGQMLDCEFEN-QALALEQLQTIHTN 175
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
KTA L + +LE ++IA + +R+AL +G+ LG+ FQL DD++D + ++ GK
Sbjct: 176 KTAKLIATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQDSSQAGKTTQN 235
Query: 228 DFRNGKPTLP 237
D
Sbjct: 236 DSHKNSYVNL 245
>gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57]
Length = 303
Score = 45.3 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 89/246 (36%), Gaps = 18/246 (7%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + S + ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSV-------LVGD 111
+ +A IE +HT +L+HDD +D++ALRR + T+V
Sbjct: 71 QTEYFKIALGIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
LLS + + + + + G+ E+ +
Sbjct: 131 ELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKL 190
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ ++ + + + L+++G+ +G+ FQ++DD++D + E GK D
Sbjct: 191 ISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAK 250
Query: 232 GKPTLP 237
Sbjct: 251 NSFVNL 256
>gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 142
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A +A +L P + L+ + D+ ++R N
Sbjct: 101 GMDGAKKEARRLVDEAHKALE--PYGEKARPLLAIADYIIERKN 142
>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ +V + + I + +++ + G G KR P+L +A +L
Sbjct: 50 ISEVEGELDAAMPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAA 109
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +H A+L+HDD D + RRG+ + +G +VL GD L A+
Sbjct: 110 LPTAAALEMLHGASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167
>gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae]
Length = 358
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 21/268 (7%)
Query: 32 DVVKYLIFSGGKR--------LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ +Y GK LRP L + +L + + ++L+ DD
Sbjct: 67 EPFEYTRSLPGKNTVGKVIESLRP--------WLNISDRSAAVLTDVMTMLQNSSLMLDD 118
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
+ D S LRRG AA + +G ++ +++++ V E + LS TL G
Sbjct: 119 IEDGSQLRRGAPAAHVKYGLSQTINSTTYIIAKVVSEVQTHLRLECAKVLSEELQTLTLG 178
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ L+ + N + ++ L + + + L+ LG
Sbjct: 179 QALDLNWTFNKTCPSVNEY-LVMIDHKTGGFFRLMLRIMEIEANATPNDELRHLITLLGR 237
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK----REKNFWKSTIND 259
+Q+ DD + + K +D GK + P+I + + + +++
Sbjct: 238 YYQIRDDYQNIASDEYTTKKGFCDDLSEGKFSFPLIHLLEHSPNASTLHKMIYDGQPVDE 297
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRA 287
GK+S E M+E +L T+
Sbjct: 298 GKMSEEAKSYIISQMKEVGSLDYTQEVL 325
>gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51]
Length = 303
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 10 KDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62
+ E+ + + S ++ +GGKR RP L LA L + D
Sbjct: 11 NECERFESFLNHHHLHLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQ 70
Query: 63 --NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A +IE +HT +L+HDD +D++ALRR + T+VL+GD L + +F
Sbjct: 71 QTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSF 130
Query: 119 C 119
Sbjct: 131 E 131
>gi|322792499|gb|EFZ16466.1| hypothetical protein SINV_00774 [Solenopsis invicta]
Length = 309
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 104/291 (35%), Gaps = 29/291 (9%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHD 82
+ V++Y + GGK+ R ++ + +L + +LA E + A L+ D
Sbjct: 1 FLLQVLEYNV-PGGKQFRALILIHAYQLLANEQVTKENIRLARILAWCGELMQAAGLMID 59
Query: 83 DVVDDSALRRGKVAARLVWGNQTSV--------LVGDFLLSQAFCMVIETKSQEALEALS 134
D+ D S LRRG+ L SV ++L + F +
Sbjct: 60 DIQDKSVLRRGQPCWYLNDNVGLSVITDALKLKNSVYYILQKYFKGKTCYVNLLETFHNI 119
Query: 135 LVACTLAEGELRQLSLSK----NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV---Q 187
++ + QLS + NL++ D I +S V +
Sbjct: 120 ILKTLDGQILDLQLSKNFSKKLNLNLFTMDQYKCIVRNKTSYYSFVCPVFLAMNLAGIKD 179
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
+ ++ + +G FQ+ DD LD+ G+ +GK+ + + V+ + +
Sbjct: 180 PEKFKQAETILLEIGHLFQVQDDFLDFFGDSEAIGKDSTDIQQGKCTWFIVMALQRATPE 239
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298
+ + + G E +K + + D SY ++A + L
Sbjct: 240 QREILEQCY---GFSDPEKVKCVKQLFNDL----DLHKVCISYTEQAFNLL 283
>gi|115756240|ref|XP_001201735.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2, partial [Strongylocentrotus purpuratus]
gi|115937791|ref|XP_785589.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
subunit 2, partial [Strongylocentrotus purpuratus]
Length = 295
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 16/98 (16%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK---RLRPMLTLATALML-- 57
L L ++ V + K + S ++ +L GK + R ++ L +
Sbjct: 72 SLRCLLSDELANVALHMRKLVGSKHPLLKTAKNFLTD--GKHSLQTRGLIILLISKAATP 129
Query: 58 ---------EYRGDNHVLLACAIEFIHTATLLHDDVVD 86
+ LA E IHTA L+H VV+
Sbjct: 130 IDSKQVPPSGGIYASQRALAEISEMIHTAFLVHRGVVN 167
>gi|552499|gb|AAA63631.1| ORF [Cyanophora paradoxa]
Length = 46
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 5/43 (11%), Positives = 18/43 (41%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGK 43
+ + +++ + + K + S ++ ++L + GK
Sbjct: 4 ITNILAPVENELDLLTKNLKKLVGSGHPILSAASEHLFSASGK 46
>gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
ATCC BAA-430]
gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
ATCC BAA-430]
Length = 287
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 92/249 (36%), Gaps = 16/249 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
MK L DL ++ + + I + + + ++ +GGKR RP L L+
Sbjct: 1 MKTL-DLV---FKEFEVYLKESSPKIPNFHPNYENALWEIVLNGGKRFRPKLLLSIVASY 56
Query: 58 EYRGDNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-------V 109
+ E +HT +L+HDD+ + L ++
Sbjct: 57 KVENVKLAFAPALALEILHTYSLIHDDLPAMDNAPFRRGCVTLHKKYDEALAILAGDGLN 116
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SK 168
A + + +E+LS + L + + L VI +K
Sbjct: 117 TQAFYLIATSKLKPKIKIKLIESLSYNGGIYGMVLGQALDCHFEGEKLPLEQLRVIHLNK 176
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
TA L +A+ E+ ++IA R++L G++LG+ FQ+ DDV+D E GK D
Sbjct: 177 TAKLIAASFEMGAMIAECDKKTRRSLYQLGLDLGLFFQIRDDVIDSTQSTQEAGKPTHND 236
Query: 229 FRNGKPTLP 237
Sbjct: 237 SAKNSYVNL 245
>gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
513.88]
Length = 696
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 109/286 (38%), Gaps = 4/286 (1%)
Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79
R+ E + +Y+ K +R A + L ++ + +H A+L
Sbjct: 393 RDRVTLGTEHLLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSIAKTLHNASL 452
Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+ DD+ D S LRRG+ A V+G ++ +F+L QA V + L+
Sbjct: 453 MLDDIEDGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVRLLEDSRCLDIFVEETRN 512
Query: 140 LAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L G+ L ++ +EE+YL +I+ KT LF + A + + L+
Sbjct: 513 LFIGQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQKATSKKNRCLPLEPLV 572
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G FQ+ DD E K ED GK + P+I A + +
Sbjct: 573 DLMGEYFQIRDDY-KNLAEEYTGQKGFCEDLDEGKFSFPLIHAHKFLPETSDIRNILKQG 631
Query: 259 DGK--ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ + ++ + E+ ++ TE S + + + +
Sbjct: 632 RRSAGLGIAQKQRVLGWLHESGSMTYTERTLRSLMSEIRHQIDGME 677
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 44.9 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + ++Y + GG+R P+ +A ++ D+ + ACA+E I + + DD+
Sbjct: 1 MHEAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 90 LRRGKVAARLV 100
+
Sbjct: 60 SELRHGKPTVH 70
>gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR5-3]
gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR5-3]
Length = 290
Score = 44.9 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 15 VNFLILKRI----CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68
++ + S ++ +++ +F GG R+RP L LA AL A
Sbjct: 8 FEQVLRSAVAEAADSRCPKLLAAALQHAVFPGGARVRPKLCLAVALANNCDAPALAAAAA 67
Query: 69 CAIEFIHTATLLHDDVV 85
++E +H A+L+HDD+
Sbjct: 68 ASVELLHCASLVHDDMP 84
>gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 402
Score = 44.9 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 70/351 (19%), Positives = 112/351 (31%), Gaps = 45/351 (12%)
Query: 12 MEKVNFLILKRIC------------------SDVEMIPDVVKYLIFSGGKRLRPMLT--- 50
++ V + + + + + +V+ L+ +GGK +RP L
Sbjct: 53 LDAVQARLAESLAFAADAGGVVTAGLPSSALVEASSLETLVRDLLAAGGKLVRPRLVRLG 112
Query: 51 LATALMLEYRGDN------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG-- 102
A D+ V +A A E +H LL DDV+D S RRG A
Sbjct: 113 YLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDDVMDASDTRRGTPTAHHQVRAA 172
Query: 103 -------------NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149
+ +VL GD + A ++ + +A L G+ L
Sbjct: 173 AAQPDGPDAARLGDSVAVLAGDLAFALANR-LVRALPEHVADAWDAAVVELVTGQRLDLV 231
Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209
+ + E V +K+ + +++ L +G LG AF L D
Sbjct: 232 FAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALLAGESAPPTWLSRFGAALGEAFALAD 291
Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269
D++ GE GK GED R KPT + LA + +
Sbjct: 292 DIIGLWGEPAVTGKPAGEDLRERKPTTVLGLADSALDGE--LTRRLAPGREPLDEAETHA 349
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ R A D+L LP + + L D R
Sbjct: 350 WLQRLDAAGVRAQAVARIADRHADALDALAALPQGAVRDELTRFADELAVR 400
>gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
Length = 289
Score = 44.9 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++E ++ LI + + S+ + + D+ Y++ GKR R L + + L
Sbjct: 9 MSIIEFWLEAK-ATIDRLIEQFLNSNRDWDLVDISSYILKD-GKRFRGTLNMFFTVALGG 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE +H+A+L DD+VD A RRG AA +V+GN+ + + ++L+ A
Sbjct: 67 DIKDSYGGALAIEILHSASLALDDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTA 124
>gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 288
Score = 44.9 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 14 KVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68
++ + + + + ++ +F G R+RP L + AL A
Sbjct: 6 RIERALTEALSQADLAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPAATEAA 65
Query: 69 CAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
A E +H A+L+HDD D + +RRG+ + +G +VL GD L+ AF
Sbjct: 66 GAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQ 119
>gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
Length = 276
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 100/260 (38%), Gaps = 14/260 (5%)
Query: 14 KVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
K+ +L+R+ S+ I + Y+ + GK +R A L L +
Sbjct: 5 KLYDTLLERLSSEWEWSQKNESCIMEPYTYITSNPGKDIRSQFIAAFNLWLTVPEEKTKA 64
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-----MV 121
+A + +H+A+LL DD+ D+S LRRG A ++G ++ +++ AF
Sbjct: 65 IARVVNMLHSASLLIDDIQDNSQLRRGSPVAHKIYGVPQTINTANYVYFLAFQEISKLRE 124
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEV 179
+ KS++ + ++V L Q D + ++ + +
Sbjct: 125 EDAKSRQGPDVDAIVTDELLSLHRGQGLDLFWRDSLQCPTEDEYIGMVNNKTGGLLRIGI 184
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239
++A +V +G+ FQ+ DD+L+ K ED GK + PV+
Sbjct: 185 KLMMAMATTNVSVNYVPLVNLIGVYFQIRDDLLNLSSINYSTNKGFAEDLTEGKFSFPVV 244
Query: 240 LAFQRGTKREKNFWKSTIND 259
+ T+ + +
Sbjct: 245 HGIWKDTENRQILSGCPTEE 264
>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
Length = 342
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 12 MEKVNFLILKRICSDVE-MIPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ V + + I ++Y + G G KR P+L +A +L +
Sbjct: 50 IADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAP 109
Query: 65 VLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
V A A++ + L+++D + RRG + + +G +VL GD L A+
Sbjct: 110 VPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTH 167
>gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
OCh 114]
gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
OCh 114]
Length = 294
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 10/234 (4%)
Query: 13 EKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-V 65
++ I + + + + + Y GG R+RP + + AL
Sbjct: 5 SRIEAAIAQAVAVGQGRGAVPQRLSSALGYATAPGGARIRPTILTSVALACGDDQPKLTD 64
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A+E IH A+L+HDD DD+ RRGK + + +VL GD L+ AF ++
Sbjct: 65 AAASALELIHCASLVHDDLPCFDDADTRRGKPSVHKAYSEPLAVLTGDSLIVLAFEILAR 124
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ + + +E + + A + + + +
Sbjct: 125 QSGLAPDRVAQMILILSQRTGMPGGICAGQGWESEAEIDLSAYHQ-AKTGALFIAATQMG 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
A + G +G AFQ+ DD+ D + + +GK +G+D +G+P
Sbjct: 184 AVAAGQEAEPWFELGARIGEAFQVADDLRDALYDADTLGKPVGQDDLHGRPNAV 237
>gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
Miyayama]
gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
Miyayama]
Length = 256
Score = 44.9 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 8 TLKDMEKVNFLILKRICSDVEM------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++K + LI + + ++ + + ++Y + + +R L L +
Sbjct: 3 VKKKLQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPY 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ + +A AIE IH+ +L+HDD+ D+S RR + A + + T++L GD LL A+
Sbjct: 63 VDTIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQ 122
Query: 120 MVIETKSQEALEALSLVACTLAEGEL 145
M+ + V +
Sbjct: 123 MLSRYGTPLVQCTSKYVLEMITGQVH 148
>gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
Length = 259
Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSALR 91
++Y +F GGK++R + + + + + + A+E IH +L+HDD +DD +R
Sbjct: 1 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFC---------MVIETKSQEALEALSLVACTLAE 142
RGK++ + +G T+VL G+ LL+ AF + + +A
Sbjct: 61 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ LS K + I KT LFS V +I N+ + ++ G N+G
Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEI-KKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIG 179
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
+ FQ+ DD++D++G GK G+D + GK TL +L +Q K I D
Sbjct: 180 LLFQIADDLIDFKGSTVIAGKLTGKDKKKGKATLISLLGYQNAIKYADKIKSKIIKDLNK 239
Query: 263 ---SVENLKKAFIIMRE 276
+ +L + + +
Sbjct: 240 YSSNTNSLNETLDYILK 256
>gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB]
gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB]
Length = 303
Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLL 67
+ + + + + S+ +++ ++ + GKR+RP+L L A L + L
Sbjct: 21 LNDIEQRLDQLLPVESERDLVGAAMRDGALAPGKRIRPLLLLLAARDLGCDVTPTGLLDL 80
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
ACA+E +H A+L+ DD +DD+ LRRG+ +G ++L LLS+AF +V +
Sbjct: 81 ACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAMAE 140
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-------KSKTAVLFSAALE 178
A VA ++ L + D++E D KT+ LF A+++
Sbjct: 141 GLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFCASMQ 200
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++S++A R+ L + +NLG AFQL+DD+ D +
Sbjct: 201 MASIVAEASAETREQLHRFSLNLGQAFQLLDDLTDGMADT 240
>gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 382
Score = 44.6 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 41 GGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
GGKR RP+L LA R + V + A+E +HT+ ++ DDV+D RRG
Sbjct: 45 GGKRARPVLLLAAHEAFGGGRHEAAVQVGAALELLHTSFVIQDDVIDGDETRRGAPN 101
>gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147]
Length = 248
Score = 44.6 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 50/288 (17%)
Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWG 102
+RP+L A + A A+E IH +L+HDD+ LRRGK + +
Sbjct: 1 MRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYD 60
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------TLAEGELRQLSLSKNL 154
T++LVGD L SQAF + + + +LV +A G+ L+ +
Sbjct: 61 EATALLVGDALQSQAFVALTDAAALPLDRQPALVRELALASGSIGMAGGQAIDLASVGHA 120
Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
+ A+L ++ + +AL +Y +G+AFQ+VDD+LD
Sbjct: 121 LSRDALETMHRMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDV 180
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
+ +GK G+D N KPT I+
Sbjct: 181 TTDSATLGKTAGKDAANDKPTY----------------------------------VSII 206
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A A+ +L + + L E+ D + R++
Sbjct: 207 ----GLDASRALAAQLRADARAALEPFGARARR--LAELADLVVNRVS 248
>gi|119709590|dbj|BAF42692.1| geranylgeranyl diphosphate synthase-2-B-isoform [Nasutitermes
takasagoensis]
Length = 316
Score = 44.6 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 7/261 (2%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
L+ D + L IH + +L DD+ D++ LRRG A ++G +++ +LL
Sbjct: 50 WLKVPADKLIALKDIGYIIHHSCVLIDDIQDNTLLRRGIPVAHSIYGVASTLNTAIYLLL 109
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+ + +A+ + G+ + N + + K A ++
Sbjct: 110 KGLKRAQILNNPDAIALCIEHLLDMYYGQGLDICWRDNNTCPSLEEYMQMIQKKAAVWLF 169
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + L++ + + M + Q+ DD + + + ED GK +
Sbjct: 170 KIGLLQLLSDNKIDFTKLNSILAMYI----QIRDDYCNLCLQQYTDERGYCEDITEGKLS 225
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
P+I A +R ++ + VE K F ++ + + T + +A+
Sbjct: 226 FPIIHAIRRHPDDQQVIH--ILRQRTRDVELKKYCFTLLEKFGSFSYTRHILKELDAEAR 283
Query: 296 DSLRCLPDSSWKK-SLMEVVD 315
+ L + + L E++D
Sbjct: 284 AEVAKLGGNPVLENVLNELLD 304
>gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
Length = 281
Score = 44.6 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDEPTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEEN 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D T G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNND------THKNSFVNLLGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
149]
gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
149]
Length = 294
Score = 44.6 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 10/234 (4%)
Query: 13 EKVNFLILKRICSD-----VE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66
++ I + + V + + Y GG R+RP + + A+
Sbjct: 5 SRIEAAIAQAVAVGQGRGAVPVRLSSALGYATAPGGARIRPTILTSVAMACGDDQPKLTD 64
Query: 67 LACAI-EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A E IH A+L+HDD DD+ +RRGK + + +VL GD L+ AF ++
Sbjct: 65 AAAAALELIHCASLVHDDLPCFDDADMRRGKPSVHKAYSEPLAVLAGDSLIVLAFEILAR 124
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
++ + + +E + + A + + + +
Sbjct: 125 ESGLAPDRVAQMILILSQRTGMPGGICAGQGWESEAEIDLSAYHQ-AKTGALFIAATQMG 183
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
A + G +G AFQ+ DD+ D + +GK G+D +G+P
Sbjct: 184 AVAAGQDAEPWFELGARIGEAFQVADDLRDALYDAETLGKPAGQDDLHGRPNAV 237
>gi|317031320|ref|XP_001393187.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
513.88]
Length = 728
Score = 44.6 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 84/242 (34%), Gaps = 7/242 (2%)
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
DV D +ALR + A LV+G + +L +A +V L+ L
Sbjct: 482 DVQDQAALRDQRTPAHLVYGPAQCMNSAAYLFVRAARIVTSLNCPGMLDGLLQELEAHFV 541
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ +L+ + + ++ S L + A L+ + LG
Sbjct: 542 GQSWELNWRFSTH-CPGETEYLAMVDQKAGASFRLLTRLMQAASMGGATLDLEPFTKVLG 600
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
Q+ + L ++ GED K T P++ A +
Sbjct: 601 RLSQIRHEYLGLLESAASD-RSFGEDLDQAKVTYPIVRACNLDPAGRAVIFGIFRQKPAG 659
Query: 263 S---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFC 317
+ +E+ ++ ++++ AL T G++A ++L L SL VV
Sbjct: 660 TVLPIESKRQIVSLVQQTGALQATYDLIRQLGREAMNTLSELETAAEELNPSLRAVVKSL 719
Query: 318 LQ 319
++
Sbjct: 720 VE 721
>gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
Length = 290
Score = 44.6 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 15 VNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68
++ + +++ + + +F GG R+RP L LA AL A
Sbjct: 8 FEQVLRSAVEEAADARCPKLLAAALHHSVFPGGARVRPKLCLAVALANHCDAPALAAAAA 67
Query: 69 CAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++E +H A+L+HDD D++ RRG+ + +G ++L GD L+ AF
Sbjct: 68 ASVELLHCASLVHDDMPCFDNADERRGRQSVHTAYGEPIALLAGDALIVSAF 119
>gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
Length = 318
Score = 44.6 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
+ + + L SGGK R L + L +LL+ IEFIH A+LLHDD++D
Sbjct: 21 PKLNKLYEDLF-SGGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDLIDR 79
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147
S LRRGK AA L + + +VL GD+LL++ + + + ++ + V L EGE Q
Sbjct: 80 SHLRRGKTAAWLKYTPEYAVLAGDYLLARVMVNLSGHGNIKLVQYTAEVISDLLEGEWLQ 139
Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
S+ + VT E + KTA LF + +
Sbjct: 140 DSVVGDFFVTMEQLDRIHNLKTASLFKWCIRAPFIAQERY 179
>gi|317028454|ref|XP_001390105.2| hypothetical protein ANI_1_1118034 [Aspergillus niger CBS 513.88]
Length = 569
Score = 44.6 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 102/289 (35%), Gaps = 19/289 (6%)
Query: 24 CSDVEMIPDVVKYLIFSGGKR--------LRPMLTLATALMLEYRGDNHVLLACAIEFIH 75
S ++ +Y + GK+ LR L L D+ ++ I
Sbjct: 272 ASAEQLCMAPYEYTRSTPGKQTISKFIECLRSWLHL--------PDDSASVIEHITNMIF 323
Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135
+TL+ DD+ DDS LRRGK AA +V+G +V +L ++A + + + A
Sbjct: 324 HSTLMIDDIEDDSMLRRGKPAAHVVFGKAQTVNSATYLYAKATRDLDQLQQDACKAAFLE 383
Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
TLA G+ L ++ + + L + L
Sbjct: 384 ELETLALGQALDLHWKFQK-TCPTTGEYLTMVDNKTGGLFRMTLRLLEIESKAEPCPDLM 442
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-- 253
+G +Q+ DD L+ + K ED GK + P+I A Q+ + +
Sbjct: 443 QLITLMGRYYQIRDDYLNLTSDEYTGTKGYCEDLSEGKLSFPLIYALQKSPEADMLRGLL 502
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
N ++S++ MR+ +L A +L +
Sbjct: 503 FHRENGHELSLDMKSYIVAEMRKVGSLAHARETALQLFDAMMGTLERVE 551
>gi|134075547|emb|CAK45077.1| unnamed protein product [Aspergillus niger]
Length = 368
Score = 44.6 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 8/255 (3%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
+ LA LE ++ A+ + TA+LL D+ D S LRR + V+G ++
Sbjct: 102 MLLALNEWLEVPEKKLQVIVRAVNLLLTASLLIGDIEDGSLLRRRQPVTHKVFGVAQTIN 161
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKS 167
+ V + + + +E + L G+ L + + TEE+YL +I +
Sbjct: 162 SANHTYFLVQQCVQQLGNPQVVEIFTEELLNLHRGQGMDLFWRETLICPTEEEYLDMISN 221
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+T LF A+ + + +G+ F++ DD + K + E
Sbjct: 222 RTGRLFRLAIRPLQAESLRTSFCA-----LVGLIGLIFRIQDDFKNLWSGAYTTNKGLCE 276
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
D GK + P+I + + + + E + A ++ +
Sbjct: 277 DITLGKFSFPIIHSIRS--NAGNRQPQHILWQRNTDKELKECARGLIESTERDQYCRQKI 334
Query: 288 YSYGQKAKDSLRCLP 302
Y Q A+ S++ +
Sbjct: 335 ILYMQAARASVKDVE 349
>gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 301
Score = 44.2 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 14 KVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70
++N + L ++ + +KY +FSG KRLR L +T + + +++ A
Sbjct: 13 RINQKLFYTLNQLPFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTA 72
Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
IEFIH+ +L+HDD+ +
Sbjct: 73 IEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKY 105
>gi|258514899|ref|YP_003191121.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257778604|gb|ACV62498.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 260
Score = 44.2 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRI-------CSDVEMIPDVVKYLIFSGGKRLRPMLTLAT 53
+ + K++E V I + + S + V+ Y +RP L + +
Sbjct: 2 VNQVFSSIKKELENVYQKIERELVIKAGHISSFAHLKHSVIDYA-------IRPALVIFS 54
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
M + + LA +FIH A +H DV + S
Sbjct: 55 GRMFGRLSEKTLALAAVCQFIHMAAQVHVDVNEQS 89
>gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F52a Mutant
Length = 299
Score = 44.2 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 19/283 (6%)
Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69
++EKV I + + ++K L GK LR L++ +A G++ +
Sbjct: 12 ELEKVKERIEQILSQFFP--EQIMKDLPLY-GKMLRVRLSILSAKNRGVEIGEDAISSLA 68
Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129
A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF V E + +
Sbjct: 69 ALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKL 128
Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
A V ++E EL + S+ +T+E+YL +++ K+ LF AL++ +L+ +
Sbjct: 129 RRAFLNVIGKMSEAELIEQL-SRYKPITKEEYLRIVEGKSGALFGLALQLPALL---EGE 184
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
+ + L + G+ +G +Q+ DD++D + ++GK+ D +NG + P++ A ++ +
Sbjct: 185 LGEDLYNLGVTIGTIYQMFDDIMD-FAGMEKIGKDGFLDLKNGVASFPLVTAMEKFPEAR 243
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ F + MRE L + E +
Sbjct: 244 QMFENRDWSG----------LMSFMREKGILKECEETLKVLVK 276
>gi|304408348|ref|ZP_07389995.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304342637|gb|EFM08484.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 310
Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 74/260 (28%), Gaps = 12/260 (4%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
LTL +M A A+E + + D+ DD + + ++
Sbjct: 48 LTLLHYMMFNGTSPEIYKAAAAVELMILSL----DIFDDLQDQDQPQSIWSQCEPAVAMN 103
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
V L + ++ + + + S + + + ++
Sbjct: 104 VAIGFLMLSAKLIEQIDLPAGNRDRMIACFNTQVLKAVNGQFSDLNNAIYSEEEYKEMTR 163
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
A + + YG ++GIA Q+ +D D D
Sbjct: 164 QKSGALVACACLVGTLAATDQHADLVLQYGQHIGIAAQIKNDHNDILRWDE------KSD 217
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV--ENLKKAFIIMRENRALVDTEYR 286
F K TL ++ +R + + EN ++ ++R + L
Sbjct: 218 FLRRKRTLLMLYLIERKEEAYFPLRNYLLGHSSREEVLENKEEYEQLIRSSGVLDYAAIH 277
Query: 287 AYSYGQKAKDSLRCLPDSSW 306
+ A D L LP
Sbjct: 278 MRIHQFDALDLLEQLPIREE 297
>gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327]
Length = 281
Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNTGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D T G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNND------THKNSFVNLLGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
15434]
gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
15434]
Length = 405
Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+G +GIAFQL DD+L G+ GK +G+D R GK T+ + L +QR + + +S
Sbjct: 275 QFGEEVGIAFQLRDDLLGVLGDPQVTGKPVGDDLREGKRTVLLALTWQRAGQEGRELLRS 334
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD----SSWKKSLM 311
+ + + S +++ +A +MR+ A+ E ++ + A +L +PD +++L+
Sbjct: 335 VLANREASSQDIAQACSLMRQCGAVQAHEEEITAHLEAAHAALDRVPDAELPEPSREALI 394
Query: 312 EVVDFCLQRL 321
+V R
Sbjct: 395 QVAQALGTRQ 404
>gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
Length = 713
Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 113/319 (35%), Gaps = 26/319 (8%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86
E + V+ L+ + G+ RP L+ + + + LA E +HTA+L+ DD+ D
Sbjct: 384 HESLVQPVRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTELLHTASLIIDDIQD 443
Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT------- 139
S LRRG+ V G ++ G ++ + L +
Sbjct: 444 GSPLRRGRATVHEVIGTPAAITAGTAAFFAFEPLLQRIPQHDPATMLRVYQLCLRALRAG 503
Query: 140 ---------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ + + D + K+ V EV++++A +
Sbjct: 504 HAGQALDLSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGVPVRCIAEVAAVLADADEAQ 563
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG-------KPTLPVILAFQ 243
+A+ Y +GI +Q+ DDV D G + G + K T PV A
Sbjct: 564 IRAVGDYFETVGIVYQISDDVADLDGVSTAQDRRQGRTAKRPAEDLLNGKVTYPVAHAVA 623
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LP 302
R + ++ + + + +A ++ + + + +A +L LP
Sbjct: 624 RLDQADRFRLRDAL--RLRTPAGAAQAAELLTHSGSPQICLEDTHDMMTRAWAALAPVLP 681
Query: 303 DSSWKKSLMEVVDFCLQRL 321
+ K + + + QR+
Sbjct: 682 PTQHKALICALGWYAAQRI 700
>gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 404
Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 84/283 (29%), Gaps = 31/283 (10%)
Query: 41 GGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
GG R+R + + +A A+E I + L+HDDV+D SA+RRGK +
Sbjct: 75 GGSRIRSRFLWWALRACGGTDAHTPGALRVAAALELIQSCALIHDDVMDQSAVRRGKPSF 134
Query: 98 RLVWGNQTSVLVGDFL------------------LSQAFC--MVIETKSQEALEALSLVA 137
Q S LS A + EAL +
Sbjct: 135 HTQIALQYSRTTAARQPGLSPFPQAAAVLAGDLALSWADDLVAEADLDPPVRTEALRIWR 194
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
E Q + + I++ +E + A
Sbjct: 195 AMRTEMIAGQYLDLHGQATSSRSAVQAIRTVCLKAARYTVEQPLALGAALAGADDANTRA 254
Query: 198 GMNLGIA----FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
G FQL DD+L + GK GED R+GK T + LA R
Sbjct: 255 LTAAGRCAGIAFQLRDDLLGVFDDPALTGKPSGEDIRSGKATYLLALAHSRAYASGATTI 314
Query: 254 KSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ D +S L + A E R +
Sbjct: 315 VDLLRDCRGSAPLSEPVLSSVREALHSTGAPAQVERRIERLAR 357
>gi|294995849|ref|ZP_06801540.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
210]
Length = 126
Score = 44.2 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
++ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A ++
Sbjct: 1 MERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELA 60
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
++ ++++A +++ + A Q A +L PD+ L+ +
Sbjct: 61 ALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PDAVRSPDLIAL 117
Query: 314 VDFCLQR 320
+R
Sbjct: 118 SQLICRR 124
>gi|332021468|gb|EGI61836.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 253
Score = 44.2 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 78/225 (34%), Gaps = 8/225 (3%)
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
+ A V+G +S+ +++L A VI K EA + L G+ +
Sbjct: 18 KEEDEVAHSVYGTASSLSAANYVLFIALERVINLKHPEATQVYMEQLLELHRGQGMDIFW 77
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
N E+ ++ + ++ + + ++ + S LG+ FQ+ DD
Sbjct: 78 RDNFICPTEEDYKIMTIRKTGGL---FNLAVRLMKLFSTYEEDFSSLIATLGLYFQIRDD 134
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+ K+ ED GK + P+I A + + + +E +
Sbjct: 135 YCNLCLGEYTENKSYCEDLTEGKFSFPIIHALRSNPDDRQIIN--IVRQRTKDIEVKRHC 192
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
++ + T A+ + L + L++++D
Sbjct: 193 IKLLERFGSFKYTRNVLEELDSTARAEIERLGGNP---LLVKILD 234
>gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
sp. SKA34]
gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
sp. SKA34]
Length = 298
Score = 44.2 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 104/290 (35%), Gaps = 32/290 (11%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++N L+ + + ++Y SGG + R + TA+ L + LLA +E
Sbjct: 21 QEINQLMFELCKHSGPVTLSYLRYHQQSGGSQRRAKICYITAVSLGLNTNTAKLLAVTVE 80
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+L+HDDV D RRG+ A + + ++ +GD L+ A+ + + +
Sbjct: 81 LLHNASLIHDDVQDKDRQRRGQDALWVKASVEEAICLGDTLIIAAYHALSKINTPANSHL 140
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ V + E Q+ E +I + A + + + S+ +
Sbjct: 141 QATVCRRVMETIRGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAK 200
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL + + +A+Q DD+ D + NI +
Sbjct: 201 ALSNAASSFALAYQFYDDLCDQAQDAINQEPNIVNIRIHELVGSL--------------- 245
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
S E++ A ++ + +A SL LP
Sbjct: 246 --------NASDEDIGTAKDDIKR---------KILILLDQATSSLVSLP 278
>gi|212638393|ref|YP_002314913.1| competence regulatory protein comQ [Anoxybacillus flavithermus WK1]
gi|212559873|gb|ACJ32928.1| Competence regulatory protein ComQ [Anoxybacillus flavithermus WK1]
Length = 296
Score = 44.2 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 17/267 (6%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L M + + +A A+E I A L DDVVD L + +
Sbjct: 46 LAYLHYDMFSKQEHPFIYIAAAVELIVLAGDLFDDVVDQDRLEDTAIPLH--------IA 97
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+G LL Q + S + L+ALS V L + Q + TE +Y+ +++ K
Sbjct: 98 IGFLLLGQQAIANVPISSNKKLKALSYVTSCLLQSVHGQQTDVTCDVQTEAEYIKMVEKK 157
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ L + A + +L+ A+++Y +GIA Q+ +D+ D
Sbjct: 158 SGSLVAMACVIGALL--AGKEDIAAIETYASYIGIAAQIDNDLDALYNWDK------KAD 209
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
K +LP++ + + + D +KA M + A+ + +
Sbjct: 210 IHAKKKSLPILYMLESKHDNLWKQYFNNDIDYDRMYIQKEKALEQMEQEGAIYYAKVMSQ 269
Query: 289 SYGQKAKDSLRCLP-DSSWKKSLMEVV 314
Y +KA + L D + K L +
Sbjct: 270 IYKEKALQEIEKLDVDDAHKSELKTFI 296
>gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
Length = 289
Score = 44.2 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEY 59
M ++E ++ LI + + S+ + + D+ Y++ GKR R L + + L
Sbjct: 9 MSIIEFWLEAK-ATIDRLIEQFLNSNRDWDLVDISSYILKD-GKRFRGTLNMFFTVALGG 66
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A AIE +H+A+L D+VD A RRG AA +V+GN+ + + ++L+ A
Sbjct: 67 DIKDSYGGALAIEILHSASLALCDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALR 126
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154
++ + +AL + + G LR + + +
Sbjct: 127 IIQTSYGDDALNTSIELWKDTSVGALRDMYDNSDY 161
>gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568]
Length = 143
Score = 44.2 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
GK + + +M L A+ +A L D + + L ++ +F +
Sbjct: 87 GKDADNDKPTYVKLM----GLEAARSYAHKLVAEAVALLEPFGDKALR--LRQLAEFAVA 140
Query: 320 RL 321
R
Sbjct: 141 RK 142
>gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92]
gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92]
Length = 297
Score = 44.2 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 30/317 (9%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDN 63
M+K+N ++++ I E+ + K L++ + L D
Sbjct: 1 MDKINEIMMEFIK---ELGYEPAL-------KMF---LSVNSGKKLRSKLLLKIAGTSDE 47
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ L IE IH A+LLHDDV+DD+ RRGK + ++G + S+++GD S+ F +
Sbjct: 48 TLRLCAIIELIHLASLLHDDVIDDADTRRGKPSINALFGTKNSIMLGDIFYSKGF-FELA 106
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
S +S L+ GEL + LS+N + ++ Y+ +I KTAVL A +++
Sbjct: 107 KFSPNIARLVSEAVSKLSIGELMDVDLSENFNDDKQKYMDMIYYKTAVLIEATAACGAIL 166
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ YG NLG+AFQ++DDVLD + +GK DF+ GK TLP I ++
Sbjct: 167 ---AGLDETKFRIYGKNLGLAFQIIDDVLDITQSADTLGKPAMNDFKEGKTTLPYIYLYE 223
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
++ K +S +S E + + + A + + A +++ +
Sbjct: 224 ALDEKGKKRLRSLHA-RDMSEEQSSWLTRNFAKFDCVQRSINEAKALCEDALVAIKGYKN 282
Query: 304 SSWKKSLMEVVDFCLQR 320
L E++ + R
Sbjct: 283 KE----LEEIIKSMIDR 295
>gi|134077716|emb|CAK45756.1| unnamed protein product [Aspergillus niger]
Length = 565
Score = 44.2 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 84/242 (34%), Gaps = 7/242 (2%)
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
DV D +ALR + A LV+G + +L +A +V L+ L
Sbjct: 319 DVQDQAALRDQRTPAHLVYGPAQCMNSAAYLFVRAARIVTSLNCPGMLDGLLQELEAHFV 378
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
G+ +L+ + + ++ S L + A L+ + LG
Sbjct: 379 GQSWELNWRFSTH-CPGETEYLAMVDQKAGASFRLLTRLMQAASMGGATLDLEPFTKVLG 437
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
Q+ + L ++ GED K T P++ A +
Sbjct: 438 RLSQIRHEYLGLLESAASD-RSFGEDLDQAKVTYPIVRACNLDPAGRAVIFGIFRQKPAG 496
Query: 263 S---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFC 317
+ +E+ ++ ++++ AL T G++A ++L L SL VV
Sbjct: 497 TVLPIESKRQIVSLVQQTGALQATYDLIRQLGREAMNTLSELETAAEELNPSLRAVVKSL 556
Query: 318 LQ 319
++
Sbjct: 557 VE 558
>gi|326427259|gb|EGD72829.1| hypothetical protein PTSG_04558 [Salpingoeca sp. ATCC 50818]
Length = 586
Score = 44.2 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 109/326 (33%), Gaps = 45/326 (13%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
I D Y+ + GK +R A A + + L +++ H +L+ DD+ D S
Sbjct: 244 IVDPCLYVFDNPGKGVRSKSIKALADNFQIHPHDLKSLMQSVDRFHELSLVIDDIEDHST 303
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147
LRR + A L +G ++ FL + V + + L+ Q
Sbjct: 304 LRRDRPCAHLKFGIPATLNSAYFLTFKLIDSVPRLFRRHHNNTIRLLIDGTVRAHRGQGL 363
Query: 148 --LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN--------------SVR 191
T ++Y+ ++K KT+ F + ++ L +
Sbjct: 364 EIYWRDNQYCPTADEYVEMVKGKTSTPFVLSCQLFFLHSTDWRVRLSSALVPPAQSICNM 423
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGE-----------VNEMGKNIGEDFRNGKPTLPVIL 240
L + + + + V + K +D K + P+I
Sbjct: 424 LGLSRFAREWLQPLHIEQRMTALFEDVGVFFQVRDDPVYWLKKGFCDDIHERKFSYPIIH 483
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
Q + + + + S + + +A +++ AL T + ++
Sbjct: 484 MIQNRLRGYEGVLRLFYAEQAPSFDEITQALETIQQTEALQHTFDYLVALRKRI------ 537
Query: 301 LPDSSWK----KSLMEVVDFCLQRLN 322
D+ + ++L+ + L+RL+
Sbjct: 538 --DTEARALQIQALLSL----LERLS 557
>gi|332025482|gb|EGI65645.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 236
Score = 44.2 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 6/224 (2%)
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
DD+ D++ +R G V+G S+ ++L A +
Sbjct: 1 DDIQDEAIMRNGFPVTNSVYGLHYSINAANYLQFIACEKFFNLHPMAVKIVIEQFMEYYK 60
Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ K + EEDY + K+ L +++ L + + V ++G+
Sbjct: 61 GQGMDLYWKEKFICPKEEDYNILAVRKSGWLNIMVVKLMKLFSTYEEDVLSLASTFGLY- 119
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
Q+ DD + R + + + +D GK + VI A ++ +K +
Sbjct: 120 ---RQIHDDYCNLRHDEDTNENSYCDDLTEGKMSFLVIHALRKNPDDKKIIN--ILKQRS 174
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305
++E + I+ + + +K + + L +
Sbjct: 175 KNIEIKRYCVKILESYGSFKYAKDVLDELEEKMRTEIDRLGGNP 218
>gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
Length = 357
Score = 43.8 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 48/347 (13%), Positives = 107/347 (30%), Gaps = 43/347 (12%)
Query: 11 DMEKVNFLILKRI------CSDVEMIPDVV---KYLIF---SGGKRLRPMLTLATALML- 57
D+++ + + + + + I D + + ++ GGKR R + + + L
Sbjct: 17 DVKRFDEVFHQLVTELIDEDAKNPEISDAMVRFRQVLEYNCPGGKRNRGLSVITSYRFLV 76
Query: 58 ------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA--------RLVWGN 103
E +++ IE++ L+ DD++D S RRG+ +
Sbjct: 77 SSDQLTEENIHRAMVVGWCIEWLQAFFLVLDDIMDQSQTRRGQPCWYRVEEVGNMAINDA 136
Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163
LL + L + + + S ++++
Sbjct: 137 CYIESCIYRLLRRFCRGQPYYVDLLELFQGTTYKTIVGQSLDLITSPDGKVNLSNFTEER 196
Query: 164 VIKSKTAVLFSAALE-----VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ + + K+ + +G FQ+ DD LD G+
Sbjct: 197 YNAIVKYKTAFYSFHLPVAAAMYMAGITSKESHENAKTILLEMGRFFQIQDDYLDCYGDP 256
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
GK + N L V ++ ++ + V +K+ + +R
Sbjct: 257 AVTGKVGTDVEENKCSWLVVQALRLVDARQRATLQENYGQNDPAKVAVVKQLYQELR--- 313
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSW----KKSLMEVVDFCLQRL 321
+ + + + + L L +SS K +E +R
Sbjct: 314 ----LQDEFWKFEESSYSQLMQLINSSSQDLPKDMFVEFARKIYKRQ 356
>gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus lugdunensis HKU09-01]
gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus lugdunensis HKU09-01]
Length = 260
Score = 43.8 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 11/253 (4%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91
++Y I +GGKR+RP+L L T ML + A A+E IHT +L+H +DD R
Sbjct: 1 MQYSINAGGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYR 60
Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--- 148
RGK+ V+G +VL GD LL++AF ++ + + L+ +
Sbjct: 61 RGKLTNHKVFGEWKAVLAGDALLTKAFDVISNDTQLDNDIKVKLIQRLAFASGHLGMVGG 120
Query: 149 ----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
S+ V + ++KT L + A+ ++ IA V V + L + +LG+
Sbjct: 121 QALDMQSETQAVDISTLEQIHRAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGLM 180
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DD+LD GE +++GK IG D N K T +L ++ + +N+ +
Sbjct: 181 FQIKDDLLDVYGEESKLGKKIGSDIDNHKSTYVSLLGKDGAEEKLTMHKNAALNELEQLK 240
Query: 265 E--NLKKAFIIMR 275
E ++ + I+
Sbjct: 241 EDYDISQLKDIVE 253
>gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1]
Length = 281
Score = 43.8 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 101/271 (37%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D T G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNND------THKNSFVNLLGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|152013432|sp|P0C565|CPPAS_TANCI RecName: Full=Chrysanthemyl diphosphate synthase, chloroplastic;
Short=CPPase; Flags: Precursor
Length = 395
Score = 43.8 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 48/337 (14%), Positives = 107/337 (31%), Gaps = 31/337 (9%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLAT 53
L +V + + D + ++ Y + GGK +R + +
Sbjct: 53 TLSSNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNV-PGGKMVRGYSVVDS 111
Query: 54 ALMLEYRGDN------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
+L+ L E++ L+ DD++D S RRG+ +
Sbjct: 112 YQLLKGEELTEDEAFLACALGWCTEWLQAFILVLDDIMDGSHTRRGQPCWFRLPEVGVVA 171
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALS----------LVACTLAEGELRQLSLSKNLDVT 157
+ LL +++ Q + + +L+ K+L
Sbjct: 172 INDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEFQTISGQMIDTICRLAGQKDLSKY 231
Query: 158 EEDYLHVI--KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
I + + + L+ G +K + LG+ +Q+ +D LD
Sbjct: 232 TMTLNRRIVQYKGSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQIQNDYLDTF 291
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
G+ + GK + L +++K ++ + V +K+ + +
Sbjct: 292 GDPDVFGKTGTDIEECKCSWLIAKALELANEEQKKILSENYGINDPSKVAKVKELYHALD 351
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
A D E + + + S++ P+ + + L
Sbjct: 352 LKGAYEDYET---NLYETSMTSIKAHPNIAVQAVLKS 385
>gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis]
Length = 456
Score = 43.8 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 34/324 (10%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR----PMLT--LATALMLEYR---GDN 63
+ + +L+ I ++ + D+VKY+ S GK R L L A+ + + G +
Sbjct: 124 DLLQSQLLEFIPNE---MKDIVKYVFQSEGKLTRQNYLSALVGLLKFAMGVNHSQPIGSD 180
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
H +L +I+ IH+A+LLHDD++D+S +RRGK A ++GN+ ++L+GD+L S++ +
Sbjct: 181 HRMLIHSIQLIHSASLLHDDILDNSEIRRGKKAPYKIFGNKRTILLGDYLFSKSCLNISL 240
Query: 124 TKSQEALEALSLVACTLAEGELRQ--------------------LSLSKNLDVTEEDYLH 163
++ A++ +S++A L +GE Q + + + Y
Sbjct: 241 IENINAMKCISIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVENYFEKYLLKSYYKT 300
Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG--EVNEM 221
+ + L + ++ + G+N G+AFQL+DD+LD+
Sbjct: 301 ASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFTNSISQVNS 360
Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281
GK D + G T+P+ +R +T E LK I+ + ++
Sbjct: 361 GKPFLNDIKQGILTIPIYFLLLGDQERATKILVNTNVHNSDKAEILKDLVNILFDTNSIQ 420
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSS 305
+ Y ++ + + S
Sbjct: 421 ASIVCVAQYLERYIHFINLISKSE 444
>gi|66529793|ref|XP_623861.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Apis
mellifera]
Length = 286
Score = 43.8 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 19/49 (38%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+ K I+ + T+ + QKA + L + + +L ++
Sbjct: 232 DYAKIHKIVMSGPGIELTKQLQKRHSQKAMEVLSVFEKNDARTALYNII 280
>gi|121534497|ref|ZP_01666320.1| geranylgeranyl pyrophosphate synthase [Thermosinus carboxydivorans
Nor1]
gi|121306990|gb|EAX47909.1| geranylgeranyl pyrophosphate synthase [Thermosinus carboxydivorans
Nor1]
Length = 71
Score = 43.8 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+++ A +L A+ ++AK +L + L ++V + L R +
Sbjct: 17 DIRNAKATYVSLYSLEGARQMAWEAVKQAKAALDGF--GAEADILRDLVSYLLTRDS 71
>gi|119481385|ref|XP_001260721.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119408875|gb|EAW18824.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 702
Score = 43.8 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 3/255 (1%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
D +L + + +TLL DD+ D S LRRGK AA L +G +V FL +
Sbjct: 437 WFSVPDDICSVLGEVMVMLFNSTLLLDDIEDGSTLRRGKPAAHLKFGLGQTVNTATFLHA 496
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+A +E + L+ + TLA G+ L+ + N + I
Sbjct: 497 EAVGYTLEHLGPDCLKIVLDEIKTLARGQALDLNWTFNK-TRPTLNEYFIMVDHKTGGFF 555
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
L + L + + + L+ +G +Q+ DD + + K +D GK +
Sbjct: 556 RLLLRGLCSLSGSGLDPDLEHLITLIGRYYQIRDDYQNLASDEYTAKKGFCDDLDEGKFS 615
Query: 236 LPVILAFQRGTKREKNFWKSTINDGK--ISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PV+ + K ++ F D K +S + + M+E +L T
Sbjct: 616 FPVLHLLEHSPKSDELFKVIYGEDRKAQLSHADKLRILAEMKEVGSLAYTLEVLEKLFTT 675
Query: 294 AKDSLRCLPDSSWKK 308
++L + + K
Sbjct: 676 MLETLDRVEEKMGKN 690
>gi|154304945|ref|XP_001552876.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
gi|150853920|gb|EDN29112.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
Length = 307
Score = 43.8 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 7/136 (5%)
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
++ +GI FQ+ DD + K + ED GK + P+I + +
Sbjct: 173 MQAESQTSGDCVPLVNLIGIIFQIRDDYQNLSSPEYSQNKGLCEDLTEGKFSFPIIHSIR 232
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
+ + K A M + + + G++ K + L D
Sbjct: 233 AAPDNLVLLN--ILKQKTDDEQVKKYAVAYMEQTGSFEYCRKVLVTLGERVKKLIEELDD 290
Query: 304 SSWK-----KSLMEVV 314
K K L ++
Sbjct: 291 GGNKGKGVMKILDKMA 306
>gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
Length = 289
Score = 43.8 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68
+K+N + + E + ++Y SGGKR+RP+L L D+H +A
Sbjct: 5 DKINQALTRFYQEKQAVSEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLTDSHYDIA 64
Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+E IHT +L+HDD+ +D+ RRG + + T++L GD L AF ++ T
Sbjct: 65 AALEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFALIAGTNL 124
Query: 127 QEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
++ + G ++ ++T + + KT L + +
Sbjct: 125 SANIKVDLIESLSNSSGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGCLLAYPFWAA 184
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ IA V + + G +G AFQ+ DD+LD + ++GK +D K T P
Sbjct: 185 AKIAEVDEQILLEIYQAGQKVGHAFQVRDDILDVTADFADLGKTPHKDLVAEKMTYP 241
>gi|78191057|gb|ABB29853.1| geranyl-geranyl pyrophosphate synthase [Nicotiana langsdorffii x
Nicotiana sanderae]
Length = 91
Score = 43.4 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A ++A+ L L+ + ++ R N
Sbjct: 49 GIEKSREFAEELNKEAQAQLAGFDQEKA-APLIALANYIAYREN 91
>gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1]
Length = 311
Score = 43.4 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 63/297 (21%), Positives = 118/297 (39%), Gaps = 28/297 (9%)
Query: 2 KMLEDLTLKDMEK-VNFLIL-KRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLA 52
L + ++ + L+ + S + + Y + GK++RP+L LA
Sbjct: 9 DTLSQQVISTLQADIETLLNHANLPS---PLHEACHYAMTGQGKKVRPLLVASSYLTVLA 65
Query: 53 TALMLEYRG-----DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQT 105
++ DN A+EF+HT +L+H +DD LRRG+ + +G T
Sbjct: 66 SSQAATIDTLPLFDDNCRRAMLAVEFLHTYSLIHDDLPCMDDDDLRRGRPTCHIKFGEAT 125
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEAL---------SLVACTLAEGELRQLSLSKNLDV 156
++L GD L + AF + A + ++N V
Sbjct: 126 ALLAGDVLQTLAFEALSADLPGFAPISNDKAASLLTLFAPRARRMVSGQMLDLNAENKQV 185
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216
++ + + KT L AA+ + + A ++ QA+ S+ N+G+AFQ+ DD+LD
Sbjct: 186 SQPQLEAIHRDKTGALIEAAVLMGAACADANDTQYQAITSFASNVGLAFQVQDDILDVTS 245
Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
+ +GK G D K T ++ + T K+ + + + + +
Sbjct: 246 STDTLGKPTGSDEGLNKSTYVKLMGVEAATDYAKSLFLAATQAIDDNFDKNSSLIDL 302
>gi|149032544|gb|EDL87422.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Rattus
norvegicus]
Length = 153
Score = 43.4 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 60/137 (43%)
Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
++ + KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S
Sbjct: 11 ILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSS 70
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
LRRG A ++G + + +++ V+ +A++ + L +G+ +
Sbjct: 71 KLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI 130
Query: 149 SLSKNLDVTEEDYLHVI 165
E+ +
Sbjct: 131 YWRDTYTCPTEEEYKAM 147
>gi|269973905|ref|NP_001161761.1| decaprenyl-diphosphate synthase subunit 2 isoform 2 [Mus musculus]
gi|74146194|dbj|BAE24234.1| unnamed protein product [Mus musculus]
Length = 352
Score = 43.4 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 32/242 (13%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVL---------------LACAIEFIHTATLLHDDVVDDSALRRGKVA-ARLV 100
N LA E IHTA L+H +V+ S L+ +
Sbjct: 124 AGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 183
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNLD 155
+GN+ ++L GDFLL+ A + ++ + +E LS L G ++ S D
Sbjct: 184 FGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDD 243
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L + + + + +A +V+ YG ++ ++ ++ D+ +
Sbjct: 244 IGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFI 303
Query: 216 GE 217
+
Sbjct: 304 KD 305
>gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100]
gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100]
Length = 282
Score = 43.4 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 12/235 (5%)
Query: 12 MEKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLL 67
+EK + + I S + +K+++ +GGK R L L + +
Sbjct: 3 LEKFKQHLEQNFPSIQSFHPFFNEALKWMLEAGGKHFRAQLLLGIVNTKNPALFEKALNA 62
Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF------C 119
A A+EFIHT +L+HDD+ LRRGK + T++LVGD L ++AF
Sbjct: 63 ALALEFIHTYSLIHDDLPAMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLSKLD 122
Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179
+ + + +++ + E + KTA L +AAL++
Sbjct: 123 LKENIRLKLIETLAFNAGLGGMIIGQAIDCYFEDIPLNLEQVEFLHIHKTARLIAAALKM 182
Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
I + + + G+ +G+ FQ+ DD++D + E GK D
Sbjct: 183 GCEICELDEKECEQIYDIGLLIGLIFQIKDDIIDATLDTQEAGKPTHNDLHKNSF 237
>gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
rochei]
gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
rochei]
Length = 439
Score = 43.4 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 60/320 (18%), Positives = 97/320 (30%), Gaps = 37/320 (11%)
Query: 15 VNFLILKRIC---SDVEM----IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
++ + +R+ + + + + + GGKR R L + R
Sbjct: 72 LDEALAERLRRARTADPLFARDVAERMTRFTLEGGKRTRAQLAWWASRACAGRDAAVAAA 131
Query: 68 ACAI----EFIHTATLLHDDVVDDSALRRGKVAARL-----VWGNQTSVLVGDFLLSQAF 118
A I E + T L+HDDV+D + LRRG+ F S A
Sbjct: 132 ALQIGAALELLQTCALVHDDVMDRATLRRGRPTLHTELASGHEDRVGPERARRFGQSAAV 191
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ +R+L ++ YL + TA A
Sbjct: 192 LAGDLALAWADDLVAETPLAVWKAVVVRRLWSDMRTEMVAGQYLDLHGQATAARSLARAL 251
Query: 179 VSSLIAGVQNSVRQAL-----------------KSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++ + SV + L G G+AFQL DD+ D G+ E
Sbjct: 252 RAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDDLDDVFGDPLET 311
Query: 222 GKNIGEDFRNGKPTLP----VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
GK G D R GK T A G + D ++ L + ++
Sbjct: 312 GKASGGDIREGKSTYLVAVARARAEAAGDGTALAVLDRWLGDTALTERGLDEVREVLVAT 371
Query: 278 RALVDTEYRAYSYGQKAKDS 297
A E + +
Sbjct: 372 GARATVETKLDRLAAQGLRH 391
>gi|327311502|ref|YP_004338399.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
gi|326947981|gb|AEA13087.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
Length = 258
Score = 43.4 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNH 64
+DM + I + + + ++Y I + GK +RP+L L +L+ + +
Sbjct: 14 VREDMGR----IGESVQ--NPSLRAAIRYYIETPGKMIRPLLLLLFTYVLDPERLKDERI 67
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A +E +H +LL DDVVD RRG R ++G+ +++ D+L+++A
Sbjct: 68 INAAALLEVLHIVSLLQDDVVDKHDARRGVETPRAIYGDGMAIVASDWLIAEAIE 122
>gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL]
gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii]
Length = 540
Score = 43.4 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A E IH +LLHDDV+D+S RRG ++ +GN+ S+L GDFLL++A +
Sbjct: 265 ENQCKIIAASEIIHMGSLLHDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVF 324
Query: 122 IETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
E + S V +L +GE Q N++ + YL KTA LFS
Sbjct: 325 ASIGYPEICKRFSYVIESLIKGEFLQTNLNYNNIEDALKTYLIKSYHKTASLFSHLFACI 384
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ + + + + G+++G+AFQL DD LDY+ + I D +N T P++
Sbjct: 385 AIISFQNDKITELCFNLGLHIGMAFQLYDDYLDYKINPKT-NQPILNDIKNNIKTAPLLF 443
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
N S IN +S ++++ ++E+ ++ E + + +KA D L
Sbjct: 444 ----SYSYNPNNVLSLINKKYLSNDDIQNVLFYIKESNSMKKNELCSLLHMKKAADILES 499
Query: 301 L 301
L
Sbjct: 500 L 500
Score = 36.5 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
L ++ ++ I I +D I + V Y+ GK+ R +L++
Sbjct: 139 YKLCENKIKNIDEHIYNIIKTDYNNINEFVTYIYQYKGKKFRVILSIL 186
>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
Length = 343
Score = 43.4 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 12 MEKVNFLILKRICSDVEM-IPDVVKYLIFSG----G--KRLRPMLTLATALMLEYRGDNH 64
+ V + + I ++Y + G G KR P+L +A +L
Sbjct: 49 IADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAA 108
Query: 65 VLLACAIEFIHTATLLHDD----VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
+ A A+E +H A+L+ D + RRG+ + +G +VL GD L A+
Sbjct: 109 LPAAAALEMLHAASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 168
Query: 121 VIETKSQEALEAL 133
VI
Sbjct: 169 VISHTPSPDPVPH 181
>gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA]
gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei]
Length = 541
Score = 43.4 bits (100), Expect = 0.046, Method: Composition-based stats.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
+N + A E IH +LLHDDV+D+S RRG ++ +GN+ S+L GDFLL++A +
Sbjct: 266 ENQCKIIAASEIIHMGSLLHDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVF 325
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVS 180
E + S V +L +GE Q +L+ + YL KTA LFS
Sbjct: 326 ASIGYPEICKRFSYVIESLIKGEFLQTNLNYTNIEDALKTYLIKSYHKTASLFSHLFACI 385
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++I+ + + + + G+++G+AFQL DD LDY+ + I D +N T P++
Sbjct: 386 AIISFQNDQITELCFNLGLHIGMAFQLYDDYLDYKINPKT-NQPILNDIKNNIKTAPLLF 444
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
N S IN +S ++++ ++E+ ++ E + + +KA D L
Sbjct: 445 ----SYNYNPNTVLSLINKKYLSNDDIQNVLFYIKESNSMKKNELCSLLHMKKAADILES 500
Query: 301 L 301
L
Sbjct: 501 L 501
Score = 35.7 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
L ++ ++ I I +D I + V Y+ GK+ R +L++
Sbjct: 144 LCENKIKNIDEHIYNIIKTDYNNINEFVTYIYQYKGKKFRVILSIL 189
>gi|297735210|emb|CBI17572.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 43.4 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRL 45
L VN + + + + + ++Y + +GGKR
Sbjct: 114 NFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRF 157
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A + AKD L L+ + ++ R N
Sbjct: 193 GIEKSRELAEQLNKDAKDQLSGFDPDKA-APLIALSNYIAYRQN 235
>gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae]
Length = 303
Score = 43.4 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--MLEYRGDNHVLL 67
+ + + + + S+ +++ ++ + GKR+RP+L L A + L
Sbjct: 21 LNDIEQRLDQLLPVESERDLVGAAMRDGALAPGKRIRPLLLLLAARDLGCNATPAGLLDL 80
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD +DD+ LRRG+ +G ++L LLS+AF
Sbjct: 81 ACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAF 133
>gi|134057781|emb|CAK38176.1| unnamed protein product [Aspergillus niger]
Length = 434
Score = 43.4 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 99/280 (35%), Gaps = 19/280 (6%)
Query: 33 VVKYLIFSGGKR--------LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+Y + GK+ LR L L D+ ++ I +TL+ DD+
Sbjct: 146 PYEYTRSTPGKQTISKFIECLRSWLHL--------PDDSASVIEHITNMIFHSTLMIDDI 197
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
DDS LRRGK AA +V+G +V +L ++A + + + A TLA G+
Sbjct: 198 EDDSMLRRGKPAAHVVFGKAQTVNSATYLYAKATRDLDQLQQDACKAAFLEELETLALGQ 257
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L ++ + + L + L +G
Sbjct: 258 ALDLHWKFQK-TCPTTGEYLTMVDNKTGGLFRMTLRLLEIESKAEPCPDLMQLITLMGRY 316
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW--KSTINDGKI 262
+Q+ DD L+ + K ED GK + P+I A Q+ + + N ++
Sbjct: 317 YQIRDDYLNLTSDEYTGTKGYCEDLSEGKLSFPLIYALQKSPEADMLRGLLFHRENGHEL 376
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
S++ MR+ +L A +L +
Sbjct: 377 SLDMKSYIVAEMRKVGSLAHARETALQLFDAMMGTLERVE 416
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 43.4 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 58/334 (17%), Positives = 121/334 (36%), Gaps = 46/334 (13%)
Query: 34 VKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL-- 90
++Y + + G R+ P L+LA R + A A E +HT +L+HDD
Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------- 143
RRGK +V+G +VL GD LLS +F + S +
Sbjct: 61 RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120
Query: 144 ---------ELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQA 193
++ L ++ + + + L I KTA L A++ + +++ G + ++
Sbjct: 121 IGSEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIES 180
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGK----NIGEDFRNGKPTLPVILAFQRGTKRE 249
L+ Y ++G+ FQ+VD + E + + ++ + + ++ + G+ +
Sbjct: 181 LRMYARSIGLLFQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQ 240
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENR---------------------ALVDTEYRAY 288
+ + + + + + + L + A
Sbjct: 241 IESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAE 300
Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A++ L D L+ + ++ R N
Sbjct: 301 KLLSDAREQLSGF-DQETAAPLLHLANYIAYRQN 333
>gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66]
gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium
muris RN66]
Length = 505
Score = 43.0 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 78/374 (20%), Positives = 141/374 (37%), Gaps = 57/374 (15%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L K+ + +L+ + S + + +V+ Y+ GK RP L L + +
Sbjct: 131 LISFISKERDYQKSKLLEIMSSYLPNSLQNVINYISEIPGKLTRPELCFLIFLCMNNSSN 190
Query: 63 NH---------------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
+L A+E IH A+LLHDD+VD+S +RRGK + L +GN+ ++
Sbjct: 191 EISIESLKSEIQLNSSQRILIKALEMIHIASLLHDDIVDESDIRRGKTSTHLKFGNKIAI 250
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
L GDFL S+A V ++ A++ +SL+ L GEL Q + + ++ L +K+
Sbjct: 251 LTGDFLFSRACHSVAFLENINAMKHVSLIVEGLVRGELLQYNDLREFLDEIKENLDEMKN 310
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM---------------------------- 199
+ + + + + +
Sbjct: 311 QNSTTTQIDIFNKYMKNYLSKIYYKTASLMSHGVSACVEVNGMQQSSNLIGNELFNIKKK 370
Query: 200 -------NLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRNGKPTLPVILAFQRGTKREK 250
N GIAFQL+DD+LD K I +D G T+P + A Q
Sbjct: 371 TIFNIGLNFGIAFQLLDDLLDIINPEANKVLNKPIMKDIIQGVLTVPTLFAIQEAPGNMI 430
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ---KAKDSLRCLPDSSWK 307
+ + + + + + I + A++ T Y + K+ + + S
Sbjct: 431 PLLYNIVENKNFTPNSKSQLLDICTDTMAILKTRLCIALYLESYIKSFQQICNI-SSPVY 489
Query: 308 KSLMEVVDFCLQRL 321
+ + L R+
Sbjct: 490 PGFFRIAEKLLTRI 503
>gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
Length = 283
Score = 43.0 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 97/270 (35%), Gaps = 18/270 (6%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHDD-- 83
+ ++Y + GG R+RP + + A+ A E IH A+L+HDD
Sbjct: 14 PAKLAAALEYAVTPGGARIRPTILTSVAMACGDDRPELTNAAGVALEVIHCASLVHDDLP 73
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143
DD+ +RRGK A + +VL GD L+ F ++ S AL L+
Sbjct: 74 CFDDADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPDRALRLIDILGTRT 133
Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203
+ + ED + + A + + + + A + + G +G
Sbjct: 134 GMP-FGICAGQGWESEDQIDLSAYHQAKTGALFIAATQMGAVAAGQEAEPWEELGARIGE 192
Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263
AFQ+ DD+ D + +GK G+D +G+P Q +R
Sbjct: 193 AFQVADDLRDALCDEQTLGKPAGQDDLHGRPNAVASYGVQGAIQRF-------------- 238
Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQK 293
+ L A + +Y K
Sbjct: 239 DDILGGAISSIPSCPGEAALAQMVRAYADK 268
>gi|297528712|ref|YP_003669987.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|297251964|gb|ADI25410.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
Length = 279
Score = 43.0 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 82/266 (30%), Gaps = 17/266 (6%)
Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
+ +GD+ +A AIE I A L DD+VD + +
Sbjct: 29 AYLHYDLFSIQGDHSTYIAAAIELIVLAGDLLDDIVDQDRFEDTA----------IPLHI 78
Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
L A + + +L T + + + + ++ +
Sbjct: 79 AIGFLLLAQQAIANVPISSNKKLKALSYVTSCLLQSVHGQQTDVACDVQTEADYLKMVEK 138
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A+ A+++Y +GIA Q+ +D+ D
Sbjct: 139 KAGSLVAMACVIGALLAGKEDIAAIETYARYIGIAAQIDNDLDALYNWDK------KADI 192
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ K LP++ + + + D +KA M + A+ + +
Sbjct: 193 QAKKKLLPILYMLESKQNNLWKQYFNNDIDYDRMYVQKEKALQQMEQEGAIYYAKVISQI 252
Query: 290 YGQKAKDSLRCLP-DSSWKKSLMEVV 314
Y +KA + L D +K L ++
Sbjct: 253 YKEKALQEIEKLDVDDRYKSVLKTMI 278
>gi|297661612|ref|XP_002809327.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pongo
abelii]
Length = 246
Score = 43.0 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 5/240 (2%)
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+LL DD+ D+S LRRG A ++G + + +++ V+ +A++
Sbjct: 1 MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ L +G+ + N E+ + + +
Sbjct: 61 FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE--- 117
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
LK LG+ FQ+ DD + + K+ ED GK + P I A + +
Sbjct: 118 DLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQ 177
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ +++ K + + + T KA + + +L++
Sbjct: 178 N--ILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALIK 235
>gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
22.4-21]
Length = 144
Score = 43.0 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + +A Q A L +P +L + +F + R +
Sbjct: 103 GLSGAKQKAQDLYQSALSELEKIP--FDTTALRALAEFVITRKS 144
>gi|251795064|ref|YP_003009795.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247542690|gb|ACS99708.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 306
Score = 43.0 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 38/324 (11%), Positives = 99/324 (30%), Gaps = 32/324 (9%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLR---------PMLTL 51
M+ L + ++M ++ SD I + ++ + +R +LT+
Sbjct: 1 MEELVPIIGQEMLRI---------SDKYFITEPLRGHARA---FIREKQAESMRFGLLTV 48
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
M A A+E A+ + DD+ D A ++
Sbjct: 49 LHYRMFGGDSGQIYRAAAAVELFILASDILDDLQDGD----APHQAWSQVPPAAAMQAAA 104
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + V+E + + L + + ++ ++ ++ +
Sbjct: 105 SFMVLSQQAVLELEFDQVLLLRVARMMNGQLLKAANGQMLDLMNAVTDEDSYLAMVQHKS 164
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
+ + + Y +G+A Q+ +D+ D ++ + +
Sbjct: 165 AALIVFACMTGVMLAGREWHPVVAEYAEEVGMAAQIKNDIKDLLRWDDKNDFILRKKTLL 224
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSY 290
+ L + + + V + ++ A + R +
Sbjct: 225 T-----LFLLEESAEEDQWILDYFEGRLQSEDVADKQQMLEEACERTGAALYGSVRMRMH 279
Query: 291 GQKAKDSLRCLPD-SSWKKSLMEV 313
+ ++ L +P+ SS K L+E+
Sbjct: 280 FNRFRELLDEVPETSSAKDKLLEI 303
>gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group]
Length = 356
Score = 43.0 bits (99), Expect = 0.060, Method: Composition-based stats.
Identities = 51/313 (16%), Positives = 101/313 (32%), Gaps = 25/313 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---------HVLLACAIEFIHTATLL 80
+ ++ Y + GGK R + + + +L+ +L IE++ L+
Sbjct: 47 LESMLDYNVL-GGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLV 105
Query: 81 HDDVVDDSALRRGKVAARLVWGNQ----------TSVLVGDFLLSQAFCMVIETKSQEAL 130
DD++D+S RRGK + S + F
Sbjct: 106 LDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFCGKSYYVDLLDLFN 165
Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI--KSKTAVLFSAALEVSSLIAGVQN 188
E ++ K+L+ I F + + L+ G
Sbjct: 166 EVEFQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFGESL 225
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+K + +G+ FQ DD LD GE +GK + L V + K+
Sbjct: 226 DNYAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQ 285
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308
+ +++ V +K + + R + E +Y +K ++ P+ + +
Sbjct: 286 KGVLFENYGKSDPACVAKVKDLYNELHLQRVFSEYERESY---EKLISAIEAQPNEAVRA 342
Query: 309 SLMEVVDFCLQRL 321
L + +R
Sbjct: 343 VLKSFLHKIYKRS 355
>gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
Length = 304
Score = 43.0 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 44/311 (14%), Positives = 91/311 (29%), Gaps = 51/311 (16%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYRGDNH 64
++ ++++++ + + S + ++Y G+ L L +A ++
Sbjct: 34 EMIEEELDRI---MSNLVKSCPAQLHKAIRYCTADEEGRHL-ASLCIAACELVGGDRHAA 89
Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
+ +AC IE L DD+ R K A + + A
Sbjct: 90 LPMACTIEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQALAALAFGTVV 149
Query: 125 KSQEALEAL-------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
S ++ T E+ +KT+ F L
Sbjct: 150 DSTLVSTDKRLRLVKEFSLSMQRLVYGQYDDVKKGESLETLEELNAKNTNKTSSFFELPL 209
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+++ G + L+ +G G+ +Q+ DD+ D EMGK+ D +N K T
Sbjct: 210 VAGAIVGGAGEEEIEGLRRFGRYFGLMWQVNDDLSDATMTAEEMGKDASSDVKNRKTTYL 269
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
++ + +A+++
Sbjct: 270 TLV--------------------------------------GAERSAQLRDELANRAREA 291
Query: 298 -LRCLPDSSWK 307
L P + K
Sbjct: 292 LLERFPAKNVK 302
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 43.0 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 63/328 (19%), Positives = 118/328 (35%), Gaps = 56/328 (17%)
Query: 7 LTLKDMEKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRL-RPMLTLATALMLEYR 60
+ V+ I + + + + ++Y + G RL ++ +A ++
Sbjct: 36 YVKSKFKAVSISIQHALPPPFKRPETLQLHEAMRYALSQG--RLMCAIVCIAACELVGGS 93
Query: 61 GDNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
D+ + ACA+E I T+T + DD+ D++ LR GK +G T++ G LL F
Sbjct: 94 QDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALLVLGF 153
Query: 119 CMVIETKSQEALEALSLVACTL-------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
+ + + A + + V E V KT+
Sbjct: 154 EHLAAHYRGDTAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAVELETLEFVHLHKTSA 213
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L A+L + ++ G + +AL++YG G+ +Q+VDD+ D E+GK G+D
Sbjct: 214 LLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGKVAGQDAMT 273
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
GK T IL + +
Sbjct: 274 GKSTYSTIL--------------------------------------GVDKSREIVGQLL 295
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+AK+ L ++ L+ ++D +
Sbjct: 296 VEAKERLGVFEETKAL-PLIHLMDHFVN 322
>gi|322796005|gb|EFZ18629.1| hypothetical protein SINV_08110 [Solenopsis invicta]
Length = 338
Score = 43.0 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 95/281 (33%), Gaps = 26/281 (9%)
Query: 21 KRICSDVEMIPDVVKYLIF---SGGKRLRPMLTLATALMLEYRGDN-----HVLLACAIE 72
+ ++ +I + +K ++ GGK+ R ++ + ++ + ++A +E
Sbjct: 17 ELTNAEHAVINNKMKKILEYNVLGGKQFRALILIYAYQLVTNKFTKENMRLVRIVAWCME 76
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
A ++ DD+ D S RRG + + + L + +I+ +
Sbjct: 77 LTQAAAIMIDDLQDQSLFRRGNPCWYRCDQIELAAITDALKLKHSIFYLIKKHCKGKECY 136
Query: 133 LSLVACTLAEGEL------------RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ L+ ++ NL++ D + I +S L ++
Sbjct: 137 VDLMETFEETSSKTVDGQILDLQLSTNVNKKPNLELFTMDTYNCIVRNKTSYYSVVLPIT 196
Query: 181 SLIAGV---QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ +S + +G FQ+ DD LD G+ GK+ +
Sbjct: 197 IAMHLAGIKDRESFMQAESISLEIGRLFQIQDDFLDCFGDSEISGKDSTDIQDGKCTWFV 256
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
V + ++ K + G E +K+ + +
Sbjct: 257 VEALQRATPEQRKILEECY---GFSDPEKVKRVKQLYTDLN 294
>gi|270602136|ref|ZP_06221589.1| geranyltranstransferase [Haemophilus influenzae HK1212]
gi|270318209|gb|EFA29415.1| geranyltranstransferase [Haemophilus influenzae HK1212]
Length = 105
Score = 43.0 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + +A Q A L +P +L + +F + R +
Sbjct: 64 GLSGAKQKAQDLYQSALSELEKIP--FDTTALRALAEFIITRKS 105
>gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
proteobacterium]
gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
bacterium 443]
Length = 292
Score = 43.0 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 9 LKDMEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGD 62
+ + + + ++ + Y +F GG R+RP + A AL
Sbjct: 2 ENGLLDCEQYLEEAMAEHATAQCPPLLAQALNYAVFPGGARVRPKICKAVALANNSSDVG 61
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97
A AIE +H A+L+HDD+ + +
Sbjct: 62 LANAAASAIELLHCASLVHDDLPCFDDATQRRGKP 96
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 42.6 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A ++A++ L L+ + ++ R N
Sbjct: 163 GIEKSREFAEKLNKEAQEQLSEFDQRKA-APLIALANYIAYREN 205
>gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 308
Score = 42.6 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 20/290 (6%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATAL 55
L + +V+ + + S + + Y GK +RP L LA A
Sbjct: 21 LLERARAEVDPALRAALGSLPGPLRRIALYHFGWEHADGTSAEEGSGKAIRPALVLAAAS 80
Query: 56 MLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
L V A A+E +H TLLHDDV+D RR + A V+G+ ++L GD L
Sbjct: 81 ALGGSEARRAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADAILAGDAL 140
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-----VTEEDYLHVIKSK 168
+ A ++ E A A + +A + E Q + + VT + L + ++K
Sbjct: 141 QALALGLLAEDPHPAAPAAAARLAHCVVELCAGQHTDTAMERRGPGEVTLAETLTMAEAK 200
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A + +L A +++ AL ++G G+AFQL+DDV+ G+ GK G D
Sbjct: 201 TGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPAGAD 260
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
K +LPV+ A GT + E+L++ + +
Sbjct: 261 LAARKKSLPVVAALTSGTPAAAELAALYATAHR--EEDLERITLAVERAG 308
>gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
Length = 277
Score = 42.6 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 12/224 (5%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---E 58
+ + + + D ++ ++K+ D + + + Y S GKR+RP++ L T ML
Sbjct: 4 EKFDKILIADKNIIDMAMIKKFDEDNP-LSESLIYASDS-GKRIRPVVFLETIKMLLGEG 61
Query: 59 YRGDNHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ + L+ A+E +H +L+HDD +D+ RRGK+ +G ++LVGD LLS
Sbjct: 62 SVDEKLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLSY 121
Query: 117 AFCMVIETKSQEALE-----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
AF ++++ + L+ + + + D E L V K+KTA
Sbjct: 122 AFEIILDLSIYDQRFLEAGKYLAKACGKDGMIKGQVFDIKSKKDENIEYILDVYKNKTAR 181
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
LF AA+ +++L A V+ + L++Y LG+AFQL DD+LD
Sbjct: 182 LFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILDKY 225
>gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 247
Score = 42.6 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 15/234 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIF-----------SGGKRLRPMLTLATALMLEYRGDNHVLL 67
+ + I S E + + Y + S GK R L A A + +
Sbjct: 2 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 61
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIE 123
+ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A + E
Sbjct: 62 SAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDE 121
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ A+ L + L G+ L +VT +DYL + KTA L + +L+
Sbjct: 122 CVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALV 181
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLP
Sbjct: 182 ANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLP 235
>gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 387
Score = 42.6 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 85/270 (31%), Gaps = 11/270 (4%)
Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84
+D + + Y+ K +R A LE + + I +H ++L+ DD+
Sbjct: 98 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 157
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
D+S RRG ++G ++ ++ AF + + +S A+ L G+
Sbjct: 158 EDNSVPRRGSPTTHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQ 217
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204
L N V D + + + + LG
Sbjct: 218 GLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDARRFVTLLGRY 277
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKI 262
FQ+ DD + D GK + P+I + + G++
Sbjct: 278 FQIRDDYQNLTSAE---------DLDEGKSSWPLIDCLTGSDPEQTMIKGILQHKGVGEM 328
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQ 292
+ + MR+ AL T +
Sbjct: 329 PMAMKRLILGKMRKGGALDSTFLLLQDMQE 358
>gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides]
Length = 288
Score = 42.6 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 5/221 (2%)
Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLH 81
S+ + + Y + GG R+RP L L+ A + R A A+E IH A+L+H
Sbjct: 20 GSEAPSKLATALDYAVTPGGARIRPTLLLSVATRCGDSRPALSDAAAVALELIHCASLVH 79
Query: 82 DD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
DD DD+ +RRGK + ++L GD L+ F ++ + AL LV
Sbjct: 80 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAADRPQRALQLVTAL 139
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199
+ + +E + A + + + + A + + G
Sbjct: 140 AVRTGMPMGICAGQGWESESQINLSAYHR-AKTGALFIAATQMGAIAAGYEAEPWEELGA 198
Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+G AFQ+ DD+ D + +GK G+D + +P+
Sbjct: 199 RIGEAFQVADDLRDALCDAETLGKPAGQDEIHARPSAVREY 239
>gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
Length = 302
Score = 42.6 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 SDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH-- 81
S V + ++Y + GGK LR + + A + + + A AIE +H +L+H
Sbjct: 38 SGVPGPVAAAMRYAVE-GGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYSLVHDD 96
Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+DD +RRGK W T+VL GD L + AF
Sbjct: 97 LPCMDDDDMRRGKPTVHRKWDETTAVLAGDALQALAFQ 134
>gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 392
Score = 42.6 bits (98), Expect = 0.077, Method: Composition-based stats.
Identities = 60/310 (19%), Positives = 94/310 (30%), Gaps = 33/310 (10%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-- 71
+ + + + S V + GGKRLR L GD L
Sbjct: 54 RTDAVFADEVASRVAA-------FVLQGGKRLRTAFVRCGWLAAGGSGDPGTPLRVGAAL 106
Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT----------------SVLVGDFLLS 115
E + L+HDDV+D+S +RRG A + +VL GD L
Sbjct: 107 ELLQACALVHDDVMDESPVRRGAPAVHAQFARLHREGRMRGSATSYSATAAVLAGDLALV 166
Query: 116 QAFC------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
A + E ++ +A L + + +
Sbjct: 167 WADDLLTETALSSPYGGHLHREWQAMRGEMVAGQYLDMRAQATGSSDETQARNIATLKSA 226
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
L + + +AG V AL+S G G+AFQL DD+L G+ GK ED
Sbjct: 227 LYTVERPLALGACLAGAGAPVMDALRSAGRCAGLAFQLHDDLLGAFGDPAVTGKPADEDL 286
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKKAFIIMRENRALVDTEYRA 287
R K T + A + + + + + + A E
Sbjct: 287 RTRKLTGLLAAALRLAGESGDTDALAVLGHQGPEPGGGTADRMRAALERTGARAAVEEEI 346
Query: 288 YSYGQKAKDS 297
+
Sbjct: 347 ARLSASSLRH 356
>gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221]
gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221]
gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Campylobacter
jejuni subsp. jejuni S3]
Length = 281
Score = 42.6 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNL------LGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +N+ + +E L + M +N +
Sbjct: 250 TKENLLNECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1]
gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1]
Length = 296
Score = 42.6 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTAT 78
++ S ++ +GGKR RP L LA N +A A+E +HT +
Sbjct: 26 KLKSFHPTFEQAFWEMLLNGGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALALEVLHTYS 85
Query: 79 LLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
L+HDD +D++ LRR + +G + LVGD L + AF
Sbjct: 86 LIHDDLPCMDNAPLRRYHPTLHVSYGVTVATLVGDGLNTYAFE 128
>gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305]
Length = 281
Score = 42.2 bits (97), Expect = 0.094, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNL------LGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str.
Illinois]
gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str.
Illinois]
Length = 256
Score = 42.2 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 8 TLKDMEKVNFLILKRICSDVEM------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
K ++K + LI + + ++ + + ++Y + + +R L L +
Sbjct: 3 VKKKLQKASRLIHETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPY 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
+ + +A AIE IH+ +L+HDD+ +
Sbjct: 63 VDTIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACH 101
>gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212]
Length = 298
Score = 42.2 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
GKR+RP++ + A + R ++ + CA+E H A+L+ DD+
Sbjct: 51 GPGKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDD 100
>gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 281
Score = 42.2 bits (97), Expect = 0.097, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNL------LGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|167630013|ref|YP_001680512.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
Ice1]
gi|167592753|gb|ABZ84501.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
Ice1]
Length = 273
Score = 42.2 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG-G-----KRLRPMLTLATALMLEYRG 61
L ++ KV + R+ +I ++L F G G K +L L TA M
Sbjct: 9 ILPELSKVRARLDDRM----PLISK--QHLRFMGLGSYDVYKLFPAILVLLTARMFGTPS 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
LA A++FI T T +H + D+ + R A + + L LS
Sbjct: 63 LKTNCLASAVQFIQTGTDIHRTIPDEGRVLRHLEKATIPFSVLVGDLYYCQFLSLLCE 120
Score = 36.9 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%)
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
E L +A ++ R L T + +A ++L+ LP + ++ ++
Sbjct: 192 EQLGRAVGLLAGCRILAATSDEVVEWLDEAMEALQALPQGAMAEAFRVLLSQL 244
>gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92]
gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter curvus 525.92]
Length = 300
Score = 42.2 bits (97), Expect = 0.100, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 12 MEKVNFLILKRIC---SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67
+++ + + S + + ++ +GGK R L L L + N + +
Sbjct: 4 LDEFIKFLNANLPKAPSFHPYYEEALGVMLKAGGKHFRAQLLLGVVDALRPQLTQNAMRV 63
Query: 68 ACAIEFIHTATLLHDDVVDDSA 89
A +E +HT +L+HDD+
Sbjct: 64 ALGLEMMHTYSLIHDDLPAMDD 85
>gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 377
Score = 42.2 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 63/346 (18%), Positives = 117/346 (33%), Gaps = 42/346 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICS-----------------DVEMIPDVVKYLIFSGGKRL 45
++ + + + + + + D ++ V + GGKR
Sbjct: 13 TMKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGKRW 72
Query: 46 RPMLTLATALML-----------------EYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88
RP+L + +A + + L+ +E IHTA+LLHDD+ D S
Sbjct: 73 RPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIEDHS 132
Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148
+ RRGK A L +G + +L A ++ + AL+A A A L
Sbjct: 133 STRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSATISATRALHMG 192
Query: 149 SLSKNLDVTEED-------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201
+ YL ++ KT L + + E+ L AG ++ + M +
Sbjct: 193 QALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREARSFGAQVMPI 252
Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261
GI FQ++DDV G V+ + + + +
Sbjct: 253 GIGFQILDDVQGIDGGVSGKAHADDIVEGKKSFPVILHVHTHPQDAPTFARLFAAARAEG 312
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
+ +K+A I+ + AL ++ + P +
Sbjct: 313 LHSPAVKQAQRILYSSEALTHARAYGLRMIERTLTRVHAHFPCNPA 358
>gi|332812281|ref|XP_003308877.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Pan troglodytes]
gi|119590424|gb|EAW70018.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
gi|119590426|gb|EAW70020.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
gi|221039434|dbj|BAH11480.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 5/240 (2%)
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+LL DD+ D+S LRRG A ++G + + +++ V+ +A++
Sbjct: 1 MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ L +G+ + N E+ + + +
Sbjct: 61 FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE--- 117
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
LK LG+ FQ+ DD + + K+ ED GK + P I A + +
Sbjct: 118 DLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQ 177
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ +++ K + + + T KA + + +L++
Sbjct: 178 N--ILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 235
>gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
coagulans 36D1]
gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
coagulans 36D1]
Length = 289
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 99/272 (36%), Gaps = 16/272 (5%)
Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107
ML + +L + + +A +E I A + DD D + Q+
Sbjct: 18 MLCVNHHHLLGGKSASVFHVAACVELIILAFNILDDWQDQD---HHRSPWMQDHAGQSLT 74
Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167
+ FLL + SQ+ A L+ + Q + +N + EE+Y+ VIK
Sbjct: 75 VETAFLLLAMSKLNGFLGSQKNNLAFQLIVDRINRSVHGQFADIRNAPLKEEEYIAVIKQ 134
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
K+ L A + + + + Y +GI QL +D+ D
Sbjct: 135 KSGALC-ALACLCGAMLAGNTTDLHLIGEYATGIGICAQLENDLDDVLH------LGEKN 187
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII---MRENRALVDTE 284
D + K TL + ++ + ++S++ L + ++ + ++ T
Sbjct: 188 DLIHKKWTLATMYLAHH--PSRIGKAVASYFENRLSLDRLLAIQSLEAWIQSSGVILYTR 245
Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVD 315
+ KAK+ + L D + K+ + VD
Sbjct: 246 VLIEAEKIKAKNIIDKLSVDETIKRQIKSFVD 277
>gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
Length = 260
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD--VVDDSAL 90
+ Y GG R+RP + L+ A+ + A A+E IH A+L+HDD DD+ +
Sbjct: 1 MDYATAPGGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADI 60
Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150
RRGK + + +VL GD L+ AF ++ + A L+ +
Sbjct: 61 RRGKPSVHRAFSEPLAVLAGDSLIVLAFEVLARQAITDPARAARLMTSLAERTGMPGGIC 120
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+ +E + + + + + + + A + G +G AFQ+ DD
Sbjct: 121 AGQGWESEPEVDLAAYHR-SKTGALFIAATEMGAIAAGHDPDNWRDLGALIGEAFQVADD 179
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ D + +GK +G+D +G+P
Sbjct: 180 LRDALLDETTLGKPVGQDALHGRPNAV 206
>gi|167465853|ref|ZP_02330942.1| hypothetical protein Plarl_25353 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 40
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
+ A + QKA S+ LPD KK L+ + F +R
Sbjct: 1 ADEIAETCIQKAIASIDPLPDIQAKKDLVNIAYFIAKRS 39
>gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14]
gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14]
Length = 298
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 53/290 (18%), Positives = 103/290 (35%), Gaps = 32/290 (11%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72
+++N L+ + + ++Y S G + R + TA+ L + LLA +E
Sbjct: 21 QQINQLMFELCKHSGPVTLSYLRYHQQSDGSQRRAKICYITAVSLGLNTNTAKLLAVTVE 80
Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132
+H A+L+HDDV D RRG+ A + + ++ +GD L+ A+ + + +
Sbjct: 81 LLHNASLIHDDVQDKDQKRRGQDALWVKASVEEAICLGDTLIVAAYHALSKINTPANSHL 140
Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
+ V + E Q+ E +I + A + + + S+ +
Sbjct: 141 QATVCRRVMETIRGQMDDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAK 200
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
AL + + +A+Q DD+ D + NI +
Sbjct: 201 ALSNAASSFALAYQFYDDLCDQAQDAINQEPNIVNIRIHELAGSL--------------- 245
Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
S E++ A ++ + +A SL LP
Sbjct: 246 --------NASDEDIGTAKDDIKR---------KILILLDQATSSLAPLP 278
>gi|215447704|ref|ZP_03434456.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85]
Length = 119
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260
+G+AFQ VDD++ G+ GK +G D K TLPV+ A ++
Sbjct: 1 MGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPA 60
Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ ++++A +++ + A Q A +L PD+ L+ + +R
Sbjct: 61 AMTASDVERATALVKVAGGGHVAQRCADERIQAAIAAL---PDAVRSPDLIALSQLICRR 117
>gi|332020708|gb|EGI61113.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 362
Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 107/318 (33%), Gaps = 35/318 (11%)
Query: 30 IPDVVKYLIFSGGKRLRPM-LTLA------TALMLEYRGDNHVLLACAIEFIHTATLLHD 82
+ V++Y + GGK++R + L A + + E +LA +E + L+ D
Sbjct: 55 MAKVLQYNV-PGGKKIRALALVYAYKVLAPSDQLTEENIRLVRILAWCVELMQAFLLVID 113
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------LSLV 136
D+ D S +RRG+ + + LL A +I+ +
Sbjct: 114 DIQDRSLIRRGQPCWYRYNDLGLAAVNDSLLLENAIFYLIKKYFKGKDCYVTLLETFHDT 173
Query: 137 ACTLAEGELRQLSLSKNL-----DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
G+ + + D+ + + I +S L ++ +
Sbjct: 174 ILKTIIGQSLDMLSTNFGKKPDLDMFTMNRYNSIVEYKTSHYSFILPITIAMHLAGIKDP 233
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ + L L DY G +++ D + GK T +++A QR T ++
Sbjct: 234 EMFRQAKTILLEMGHLFQVQDDYLGCYSDVHSKDYTDIQEGKCTWLIVVALQRATPEQRK 293
Query: 252 FWKSTINDGKISVENLKKAFIIMRENR-----AL--VDTEYRAYSYGQKAKDSLRCLPDS 304
+ E +++ + + ++ +T + Q+ LP S
Sbjct: 294 ILEECYGSP--DPEKVRRVRQLFTDLGLPNTYSIYEEETYNLLNVHIQQISR---GLPHS 348
Query: 305 SWKKSLMEVVDFCLQRLN 322
+ ++ R++
Sbjct: 349 ----LFLNLLRKIYHRVS 362
>gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 281
Score = 42.2 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNL------LGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L K M +N +
Sbjct: 250 TKENLLSECEQDLEKLNKKLAQMIQNLIIQY 280
>gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase;
geranyltranstransferase [Schistosoma mansoni]
gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni]
Length = 401
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 20/211 (9%)
Query: 19 ILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVL 66
+L+ + + + V Y + S GKR+R +L + + ++ + +N L
Sbjct: 27 LLRHVHPKSLELAEQHFQNVTSYNLSS-GKRIRGVLVVLSYMVFSNKNENSRKNLSCVYL 85
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ +E +H L+ DD++D+S LRRG+ + L+G +
Sbjct: 86 IGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHCTQIDSNRGLIGVN-------DGLHLIL 138
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
SL A ++ + N+ + I KT + S+
Sbjct: 139 SSKYLIHSLFAENQSDVDSYSWKDKNNVYLKLCKLFDEISYKTCSGQCLDVLSSNPNNQC 198
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
+Q + V + + +
Sbjct: 199 ILDRKQNNLEFDSFTRNYSPDVFEAITHWKT 229
>gi|147677775|ref|YP_001211990.1| hypothetical protein PTH_1440 [Pelotomaculum thermopropionicum SI]
gi|146273872|dbj|BAF59621.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 256
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
A +Y +KA SL LPD+ +K + ++ D RL
Sbjct: 214 KYAAAYLEKALSSLALLPDTPERKLMEKMTDLLSGRL 250
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 35/88 (39%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + ++ V+ LI + + D K +RP L + ++ +
Sbjct: 2 LADILEPIEAELRYVSDLIEGHLTIKAGYLGDFAHLEFSYTDKTVRPALVILSSRIYGLA 61
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDS 88
LLA +FIH A+ +H + ++
Sbjct: 62 RQKTALLASVFQFIHMASKVHQGISEND 89
>gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
Length = 276
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL 51
+ V L ++ S + +++ Y + SGGKR+RP+ +
Sbjct: 7 DYINNVISNFLAKLESIPDKTKELIIYSVLSGGKRIRPIFLI 48
>gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
Length = 384
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 20/290 (6%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-----------FSGGKRLRPMLTLATAL 55
L + +V+ + + S + + Y GK +RP L LA A
Sbjct: 97 LLERARAEVDPALRAALGSLPGPLRRIALYHFGWEHADGTSAEEGSGKAIRPALVLAAAS 156
Query: 56 MLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
L V A A+E +H TLLHDDV+D RR + A V+G+ ++L GD L
Sbjct: 157 ALGGSEARRAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADAILAGDAL 216
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-----VTEEDYLHVIKSK 168
+ A ++ E A A + +A + E Q + + VT + L + ++K
Sbjct: 217 QALALGLLAEDPHPAAPAAAARLAHCVVELCAGQHTDTAMERRGPGEVTLAETLTMAEAK 276
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T L A + +L A +++ AL ++G G+AFQL+DDV+ G+ GK G D
Sbjct: 277 TGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPAGAD 336
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
K +LPV+ A GT + E+L++ + +
Sbjct: 337 LAARKKSLPVVAALTSGTPAAAELAALYATAHR--EEDLERITLAVERAG 384
>gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 276
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60
+ + D + ++ I + + + + Y GGKR+R L L T M
Sbjct: 5 EKFLESLSLDKKIIDREIQSYFNPKNK-LEEAMVYATD-GGKRIRAFLYLETKKMFSQNI 62
Query: 61 GDNHVLLACAIEFIHTATLLH 81
+ LA +IEFIH +L+H
Sbjct: 63 SELDYKLAMSIEFIHAYSLVH 83
>gi|325289010|ref|YP_004265191.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324964411|gb|ADY55190.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 304
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 82/264 (31%), Gaps = 9/264 (3%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L + M + + + A A+E + + + DD+ D+ + +
Sbjct: 46 LVILHYQMFDGQSTDIFRAAAAVELMILSLDIFDDLQDND----NFSVPWNNIDHAIVMN 101
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ LL + + T + +A+ + L++ E + ++ +
Sbjct: 102 IATGLLMLSTKSLEHTSFEPNKKAMGTNYLNSCVIKAINGQHIDLLNLIESEKDYIEMVR 161
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ A A + + Y +LGI Q+ +D+ D +
Sbjct: 162 SKSGSLMASACLVGTALASENHHDVVNKYAEHLGIIAQIKNDINDIFRLDPKNDLLNKRK 221
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288
+L Q+ + + K + + + I+R++ L +
Sbjct: 222 TLLTLY----LLNLQQPQYQFVRDYFDGKTIKKELLNDRAELEEIIRKSGVLEYAQIIIR 277
Query: 289 SYGQKAKDSLRCLP-DSSWKKSLM 311
+A + + + WK L+
Sbjct: 278 INQLQAIELIDKMSVQKEWKNKLL 301
>gi|212960746|gb|ACJ38671.1| farnesyl pyrophosphate synthase [Chimonanthus praecox]
Length = 358
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 103/311 (33%), Gaps = 23/311 (7%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHTATLLHD 82
I ++ Y + GGK R + + + L+ + +L IE++ L+ D
Sbjct: 51 IDRMLDYNV-PGGKLNRGLSVIDSYKSLKQGKELSEEEIFLACVLGWCIEWLQAYFLVLD 109
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---------- 132
D++D S RRG+ V + LL ++ +E
Sbjct: 110 DIMDGSHTRRGQPCWFRVPKVDMIAVNDGILLRNHIPRILRRHFREKPYYVDLLDLFNEV 169
Query: 133 --LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190
+ L + + V F + + L++G
Sbjct: 170 EFQTASGQMLDLITTHEGESDLSKYSMPVYRRIVQYKTAYYSFYLPVACALLMSGENLEN 229
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+K+ + +G FQ+ DD LD G+ +GK + L V + ++K
Sbjct: 230 FIDVKNILIEMGTYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLVVQALDRADENQKK 289
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+++ V +K + ++ ++ E +Y + S+ P S ++ L
Sbjct: 290 ILFENYGKADPSHVIKIKTLYNDLQLQAVFLEYERESYKHL---IASIDAFPSKSVQEVL 346
Query: 311 MEVVDFCLQRL 321
+ +R
Sbjct: 347 KSFLGKIYKRQ 357
>gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
Length = 281
Score = 41.9 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + ++ +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 17 KVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV---------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ + L + +LS A
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 136
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + + G+ ++ ++ + + KTA L +AAL++ I + N
Sbjct: 137 AFNAGLNGMVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEES 195
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 196 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPANNDIHKNSFVNL------LGLEQAIK 249
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +++ + +E L + M +N +
Sbjct: 250 TKENLLSECEQDLEKLNEKLAQMIQNLIIQY 280
>gi|332523798|ref|ZP_08400050.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
gi|332315062|gb|EGJ28047.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
Length = 319
Score = 41.9 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 53/322 (16%), Positives = 107/322 (33%), Gaps = 14/322 (4%)
Query: 1 MKMLEDLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFS-GGKRLRPMLTLATALMLE 58
M+ L ++ L EK F I RI + + +P ++ G R RP+LT +
Sbjct: 1 MRNLPEIVLTKKEKGFLFEIDSRIKALLLELPKQYHDILQVVNGNRFRPLLTYYGYTLYS 60
Query: 59 YR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ A AIE IH A+++ DD++D R G + ++++ FLL +
Sbjct: 61 NELNETIYHSATAIELIHKASIIIDDIIDQDEKRHGLPTVHQQYSINEALIITVFLLGKC 120
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
++ +++ LS D + I
Sbjct: 121 IELLSNIDDSTIRLFSQMISKMCQGT----LSELNIDDNVTLSEVKYILDNQTSQVIQNS 176
Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
+ + + + Q L++ G LG FQL++D Y M G L
Sbjct: 177 LIIGMKSYDDSIYNQYLETIGYKLGYLFQLLNDCEAYFNPKFAM-------KYKGNANLD 229
Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297
+ + + + +++ N ++++ + L + +
Sbjct: 230 INKQRKNLCFSYLEQFLNYKEKIELNNGNYSILNHLLKKYQILDYVRQEIHCIELDIQSH 289
Query: 298 LRCLPDSSWKKSLMEVVDFCLQ 319
L L + L + + +
Sbjct: 290 LNHLGEELNTDRLTLFIRYAIN 311
>gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
Length = 335
Score = 41.9 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 71/329 (21%), Positives = 125/329 (37%), Gaps = 73/329 (22%)
Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---------------------RGDNHV 65
+ D +Y++ GK +RP+L A+A Y D
Sbjct: 45 PSPLLDACRYVMTGTGKLVRPLLV-ASAFASTYSHNDTIADKDNALATLLENDSDYDMSR 103
Query: 66 LLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
A A+E +HT +L+HDD +DD LRRG+ A +V+ T++L GD L + AF ++
Sbjct: 104 RAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVLTA 163
Query: 124 TKSQEALEA----------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
A + A + G++ L+ +++ D + + KT L
Sbjct: 164 EMPTFAPFDSDIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGALI 223
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
AA+ + + AG + R AL+ ++G+AFQ+ DD+LD + +GK G D + K
Sbjct: 224 EAAMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDVTTSTDMLGKPAGSDEKLDK 283
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
T ++ + A S
Sbjct: 284 STYVKLM--------------------------------------GVDKATSYAQSLFDD 305
Query: 294 AKDSLR-CLPDSSWKKSLMEVVDFCLQRL 321
+ +L L + +LM ++++ R
Sbjct: 306 GRAALNRELSGNKDTDALMALIEWLWARK 334
>gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
SS14]
gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum]
gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
SS14]
Length = 364
Score = 41.9 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 61/294 (20%), Positives = 105/294 (35%), Gaps = 25/294 (8%)
Query: 38 IFSGGKRLRPMLTLATALML-----------------EYRGDNHVLLACAIEFIHTATLL 80
+ GGKR RP+L + +A + + L+ +E IHTA+LL
Sbjct: 52 VSCGGKRWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLL 111
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
HDD+ D S+ RRGK A L +G + +L A ++ + AL+A A
Sbjct: 112 HDDIEDHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSATIS 171
Query: 141 AEGELRQLSLSKNLDVTEED-------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193
A L + YL ++ KT L + + E+ L AG ++
Sbjct: 172 ATRALHMGQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREARS 231
Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253
+ M +GI FQ++DDV G V+ + + +
Sbjct: 232 FGAQVMPIGIGFQILDDVQGIDGGVSGKAHADDIVEGKKSFPVILHVHTHPQDAPTFARL 291
Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306
+ + +K+A I+ + AL ++ + P +
Sbjct: 292 FAAARAEGLHSPAVKQAQRILYSSEALTHARAYGLRMIERTLTRVHAHFPCNPA 345
>gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
Length = 224
Score = 41.9 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQRLN 322
L + +A + ++A D+L ++ +L + + + R +
Sbjct: 183 GLDAAQQKAKTLHEQALDALSGF---DYRADNLRHLSAYIINRRS 224
>gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona
intestinalis]
Length = 348
Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 100/315 (31%), Gaps = 26/315 (8%)
Query: 28 EMIPDVVKYLIFSG-GKRLRPMLTLATAL--MLEYRGDN----HVLLACAIEFIHTATLL 80
E I D+++Y + GKR R + +A + ++ + + A+E + + L+
Sbjct: 38 ERIKDLLEY--NAPHGKRTRGLTVVAAFKTIAGDGISEDEMKLALTMGWAVEILQASFLV 95
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA------FCMVIETKSQEALEALS 134
DD++D S RRG+ L + +L + + +
Sbjct: 96 ADDLMDQSKTRRGQACWYLNPNVGYQAVNDGMILETCVFTLIRQHCKGKAFYADIFDLFH 155
Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS----- 189
V G+ + S+ V + + +A +A
Sbjct: 156 KVILNTLMGQSLDMEASEQPTVDFTLFTETKHAAIIKYKTAFYSFYLPVAIAFYMAGIND 215
Query: 190 --VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
A +G FQ+ DD LD G+ GK + N L + +
Sbjct: 216 EQCHTAACDILTKIGCLFQIQDDYLDCYGDPEVTGKIGTDIEDNKCSWLIIKAIQLATPE 275
Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW- 306
+ + ++ V +K+ F + + E +Y D + D
Sbjct: 276 QIRILQENYAKKDPEKVAIVKRVFDDINIKPIFLKHEE--ETYASIC-DEINKFSDPRVP 332
Query: 307 KKSLMEVVDFCLQRL 321
+++++ +R
Sbjct: 333 HSIFLDLLNKIYRRK 347
>gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 370
Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 60/286 (20%), Positives = 105/286 (36%), Gaps = 13/286 (4%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
+ GGKR R L +A + + A+E + T L+ DD +D +RRG
Sbjct: 74 TL-RGGKRFRAGLLVAAYQGVAPDAPLGPAIDAGVALELLQTYLLIQDDWIDGDTVRRGD 132
Query: 95 VAAR---------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
G +++L GD S A + + A +++ ++
Sbjct: 133 RTVHVALTETLGDPHLGASSAILAGDLTWSFALSTLAGADAPPATTLAAVLLFCKMHEDV 192
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205
+ E+ + L + + +AG AL+ + +G+AF
Sbjct: 193 VIGQHLDVVGRAEDVEQMHALKTGSYTVRGPLALGATLAGAPAETVAALERFAAPVGVAF 252
Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265
QL DD+L G GK +G D R GK T + A R ++ + + S +
Sbjct: 253 QLRDDLLGTFGSAAATGKPVGNDLRAGKRTAVLAAAEGRLDPAGRSAVERALGRKDASDD 312
Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSL 310
+ A + + A E R + +A+ R LP S ++ L
Sbjct: 313 AVAAATLALEACGARRAVEERLSALCGEAEVLARSLPVSAPARQIL 358
>gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Geranyltranstransferase
gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli
dimethylallyltranstransferase, Swiss-Prot Accession
Number P22939 (Fujisaki et al., J. Biochem.
108:995-1000(1990) [Bradyrhizobium japonicum USDA 110]
Length = 332
Score = 41.5 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 67/329 (20%), Positives = 122/329 (37%), Gaps = 59/329 (17%)
Query: 9 LKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
++V + + +C++ + + ++Y GGKR R +L LA + +
Sbjct: 38 QDGAKRVEEALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHMLD 97
Query: 66 LLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ AIE +H TL+HDD+ LRRG + +G T++LVGD L + AF +
Sbjct: 98 DVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLAS 157
Query: 124 TKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ V+ A G V + + + + K+ L A++
Sbjct: 158 LNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASV 217
Query: 178 EVSSLI----AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ +L ++ AL Y G+A Q++DD+LD + +GK G+D K
Sbjct: 218 RMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQK 277
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT I+ L + A +
Sbjct: 278 PTCASIM--------------------------------------GLQEARQFALDLLRD 299
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +++ L + + L ++ +QR N
Sbjct: 300 AGEAIAPLGPRAER--LAQL----IQRAN 322
>gi|303398760|emb|CBW46741.1| B318L [African swine fever virus Georgia 2007/1]
Length = 318
Score = 41.5 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 9/217 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
E+ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 EEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAAEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++ G AFQL DD+ D+ +
Sbjct: 233 TGSVEDIGMIERAAHCFGHAFQLADDIKDHDTDTGWN 269
>gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 371
Score = 41.5 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 8 TLKDMEKVNFLI------LKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57
D+ V+ + D + + + GGKRLRP L+ L
Sbjct: 23 LDADLVAVDAALAVFFAERSAAAGDFGHAYRRLWESARDAAE-GGKRLRPRFLLSAFHGL 81
Query: 58 EYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
D + A A E +HTA LLHDD++D +RRG+ + D L
Sbjct: 82 GAPDDRREDAIRTAVAFELLHTAFLLHDDLIDGDTVRRGRPNVAGEFSADALFRGADAPL 141
Query: 115 SQAF 118
+ +
Sbjct: 142 ATVW 145
>gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
Length = 715
Score = 41.5 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 59/299 (19%), Positives = 111/299 (37%), Gaps = 28/299 (9%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ D + ++ME V + + +DV + +Y+ GK +R A +
Sbjct: 399 INDDSHQEMEVVQDV--PSLGTDV--LEAPSRYIDSLPGKGIRHKAIDALNVWYRVPPQQ 454
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+++ A+ +H A+L+ DD+ D S LRRGK AA LV+G ++ F A +
Sbjct: 455 AAIVSKAVHLLHGASLMLDDIEDSSRLRRGKPAAHLVFGTMQTINSAGFRFLNALEELTN 514
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+K +E + + LA + ++ ++ A + +
Sbjct: 515 SKLEELQDLYVGQSYDLAWT---------CNLSCPTEEEYLAMVDGSLFRMLARMLDAQS 565
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + LG FQ+ DD ++ K ED GK +LP+I A
Sbjct: 566 DSPTKPDVVLITRFMTLLGRFFQIRDDYMNLTSADYTKQKGFCEDLDEGKYSLPIIHALS 625
Query: 244 RGTKREKNFWKSTIND---------------GKISVENLKKAFIIMRENRALVDTEYRA 287
R + + KS N GK++++ +++ +L T
Sbjct: 626 RCGNSKSSDIKSKANSHVAILQNLLSQRQIAGKMTLDQKNLFLEHLKQTGSLEYTRQAM 684
>gi|19115339|ref|NP_594427.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces
pombe 972h-]
gi|60389474|sp|O13851|DLP1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
2; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 2
gi|2239206|emb|CAB10123.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces
pombe]
gi|34393187|dbj|BAC82458.1| decaprenyl diphosphate synthase subunit2 [Schizosaccharomyces
pombe]
Length = 294
Score = 41.5 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ + L +Y + AK SL PD K++LME+ +
Sbjct: 251 DAQVLQKNNDILKTYVENAKSSLSVFPDIEAKQALMEIANSV 292
>gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Campylobacter concisus 13826]
gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter concisus 13826]
Length = 299
Score = 41.5 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 31/263 (11%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
M +LED +N + K S + + ++ +GGK R +L L ++
Sbjct: 1 MSLLEDFVK----FLNANLPKA-PSFHPYYEEALGVMLKAGGKHFRALLLLGVVENVDKS 55
Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117
+ +A +E +HT +L+HDD+ LRRG + + T++L GD L + A
Sbjct: 56 LTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTPTLHVTYDETTAILAGDALNTHA 115
Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI------------ 165
F + + + G + E I
Sbjct: 116 FYEISRADLPADTRIKCVEILSQNAGVSGMVLGQALDCFFENTNKEDIKRAKAKFGLSGK 175
Query: 166 -----------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214
KTA L +A+L++ ++I + + G+ LG+AFQ+ DD++D
Sbjct: 176 MLSLDELVFLHIHKTAKLIAASLKMGAVIVNLDEKECDKIYDIGLKLGLAFQIQDDIIDL 235
Query: 215 RGEVNEMGKNIGEDFRNGKPTLP 237
+ GK + D T
Sbjct: 236 TSDEAAAGKPVHNDLAKNSFTNL 258
>gi|302544313|ref|ZP_07296655.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate
synthase) [Streptomyces hygroscopicus ATCC 53653]
gi|302461931|gb|EFL25024.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate
synthase) [Streptomyces himastatinicus ATCC 53653]
Length = 266
Score = 41.5 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71
+ V +++ SDV I + ++L GG+RLRP+L L A + V A +
Sbjct: 17 LAAVEEGLVEATRSDVPFISEAARHLARPGGRRLRPLLVLLAARFGDPDAPGVVPAAVVV 76
Query: 72 EFIHTATLLHDDVVD 86
E H AT HDDV
Sbjct: 77 ELTHLATRYHDDVRH 91
Score = 40.7 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
AL + + A +L LP + +L ++ D +
Sbjct: 224 ALTEARHEVLRQCAAAHAALTPLPAGPARTALADLCDAVAE 264
>gi|73427150|gb|AAZ76165.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|73427153|gb|AAZ76167.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium]
Length = 31
Score = 41.5 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
KA +L+ LPD+ W+++L+ + +QR
Sbjct: 1 DKAISALQILPDTPWREALIGLAHIAVQR 29
>gi|9628182|ref|NP_042768.1| prenyltransferase [African swine fever virus]
gi|82051504|sp|Q65164|TPRT_ASFB7 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
gi|780444|gb|AAA65304.1| prenyltransferase [African swine fever virus]
gi|162849284|emb|CAN10174.1| Prenyltransferase [African swine fever virus Benin 97/1]
gi|162849457|emb|CAN10424.1| Prenyltransferase [African swine fever virus OURT 88/3]
gi|291289519|emb|CBH29176.1| BA71V-B318L [African swine fever virus E75]
gi|1097465|prf||2113434CC prenyltransferase
Length = 318
Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 9/217 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
++ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 KEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++ G AFQL DD+ D+ +
Sbjct: 233 TGTIEDIGMIERAAHCFGHAFQLADDIKDHDTDTGWN 269
>gi|229891677|sp|P0C9E0|TPRT_ASFP4 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 9/217 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
E+ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 EEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++ G AFQL DD+ D+ +
Sbjct: 233 TGTIEDIGMIERAAHCFGNAFQLADDIKDHDTDTGWN 269
>gi|87133512|gb|ABD24398.1| geranylgeranyl pyrophosphate synthase [Dietzia sp. CQ4]
Length = 382
Score = 41.5 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 54/296 (18%), Positives = 96/296 (32%), Gaps = 29/296 (9%)
Query: 42 GKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
GK +R L A A+E +H A L+HDDV D RRG+ +
Sbjct: 77 GKGMRSALFDAVYTHAGGRDEAVRAAACQALELLHEAFLVHDDVADGDDHRRGRPNLQGR 136
Query: 101 WGNQTSVL----------------------VGDFLLSQAFCMVIETKSQEALEALSLVAC 138
+ + + + A V A+ +
Sbjct: 137 TTTRGAEQGLSRETAAHVGMVGGLLGGDLLLVAAMGEFARLPVPAPVLHRAMAEVEGAVV 196
Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVRQALKS 196
GE + + + + T +++ I + +S L + + + L+
Sbjct: 197 ASIAGEYADVHGAAHGEPTTQEHALAIGAAKTAAYSVTLPMVLGVVLAGGPEEMIPPLRE 256
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
G +LG A+Q+VDDVL G+ GK+ D PT+ + A +
Sbjct: 257 TGRHLGTAYQVVDDVLGVFGDPAVTGKSNEGDLMRRAPTVLLAFASTTDLWPRVDAALGG 316
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSL 310
+ G+ + A ++ E A A A+ +L P + +L
Sbjct: 317 TDAGRPGP-DPAAARALLAECGARDHALGIAEDLVTAARAALDS-PAVPHELRSAL 370
>gi|138895709|ref|YP_001126162.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
gi|196250964|ref|ZP_03149647.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267222|gb|ABO67417.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
gi|196209528|gb|EDY04304.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 310
Score = 41.1 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 81/262 (30%), Gaps = 10/262 (3%)
Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
M +A ++E + A + DD+VD +L A L ++ + L
Sbjct: 57 YQMFSENMKETERIAASVELMMLAGDMLDDLVDQDSLETTWNKAPLTTSLHIAIGL---L 113
Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
L+ +V L + + + D+ E + K +
Sbjct: 114 LAGQKAIVDLLIDDHKKAKAQLYISSRLLQSVNGQHMDVTYDIQTEAEYIEMVKKKSGSL 173
Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
A ++ Y ++GIA Q+ +D+ D + K
Sbjct: 174 VAMACFVGTALAGAEKNTVIIEKYANDIGIAAQIENDIDALYRWDE------KNDIKAKK 227
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
+LP++ + S D +K M + A + + Y +K
Sbjct: 228 KSLPILYMLTSKRDNLLKQYFSNHVDYNELYVQKEKVIQQMEQEGAFYYAKVMSQIYKEK 287
Query: 294 AKDSLRCLPDSS-WKKSLMEVV 314
A + L + +K +L ++
Sbjct: 288 ALQEIEKLDVNDRYKSALKMII 309
>gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans]
Length = 150
Score = 41.1 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ + A + A D++ L L + + ++R N
Sbjct: 109 GIEGAKKMAKEKLEAALDAVSGL--GEKANHLRGIARYIIERRN 150
>gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
Length = 362
Score = 41.1 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 85/268 (31%), Gaps = 18/268 (6%)
Query: 41 GGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
GGKRLR + A ++ A +E + T L+HDD++DD +RRG +
Sbjct: 60 GGKRLRVAMLYEAARLVTPDPVPGLEEAALGVELLQTHGLVHDDIIDDGPVRRGGPSTYY 119
Query: 100 VWGNQTS-----------------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
+ Q +++ +L + + + + + A +
Sbjct: 120 AYREQFPDRPQDALGLAVLAGDLALVLSLRVLLDSPAPPSARHAMVGVLSAAASAMIAGQ 179
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
+ + + K+ + + L+ Y +G
Sbjct: 180 ITDIERDFTHLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLVG 239
Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262
I + DD LD G+ MGK+ G D R+GK + + E+ ++ +
Sbjct: 240 IYETMRDDYLDLFGDARTMGKSTGSDLRDGKRSYTITAVLAAVNGTERAVVEAALGAPSC 299
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSY 290
+ + + I Y
Sbjct: 300 TPQTVAAVREIAVSRGVEQKLRADMRRY 327
>gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
Length = 335
Score = 41.1 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 67/329 (20%), Positives = 122/329 (37%), Gaps = 59/329 (17%)
Query: 9 LKDMEKVNFLILKRICSDVE---MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65
++V + + +C++ + + ++Y GGKR R +L LA + +
Sbjct: 41 QDGAKRVEEALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHMLD 100
Query: 66 LLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ AIE +H TL+HDD+ LRRG + +G T++LVGD L + AF +
Sbjct: 101 DVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLAS 160
Query: 124 TKSQEALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177
+ V+ A G V + + + + K+ L A++
Sbjct: 161 LNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASV 220
Query: 178 EVSSLI----AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
+ +L ++ AL Y G+A Q++DD+LD + +GK G+D K
Sbjct: 221 RMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQK 280
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
PT I+ L + A +
Sbjct: 281 PTCASIM--------------------------------------GLQEARQFALDLLRD 302
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A +++ L + + L ++ +QR N
Sbjct: 303 AGEAIAPLGPRAER--LAQL----IQRAN 325
>gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
Length = 378
Score = 41.1 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 102/283 (36%), Gaps = 31/283 (10%)
Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN-----HVLLACAIEFIHTATLLHDDVVDDSALR 91
+ GKR+RP L + A+E + L HDD++D S LR
Sbjct: 64 FVLGSGKRIRPAFAWLGWLGAGGDAAGASAVPVQRVCAALELLQAGLLAHDDIIDQSDLR 123
Query: 92 RGKVAARLVWGNQTS-----------------------VLVGDFLLSQAFCMVIETKSQE 128
RG+ + + + S + D L ++ V E
Sbjct: 124 RGEPSLHRRFEAEHSRERWAGRSERHGEALAILAGELAFVWADDLAAEGLDAVTEADRPA 183
Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAGVQ 187
A + + + G+ + D +EE VI+ KTA A E+ ++A
Sbjct: 184 FRRAWAAMRSEVIGGQCLDVLAQAGGDESEEAAARVIRWKTASYTVARPLELGGVLARAD 243
Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247
++ + +G ++G AFQL DD+L G+ GK G+D R GK T+ LA
Sbjct: 244 EALLTFYRGFGEDVGAAFQLQDDLLGVFGDPAVTGKPAGDDVREGKRTVLAALALSAARS 303
Query: 248 REKNFWKSTINDGKISVEN--LKKAFIIMRENRALVDTEYRAY 288
++ + ++ + +A ++ A R
Sbjct: 304 AGSAEEQALRSVFGRGDDDHAVAEAVAMIDRLGARAQVRARIE 346
>gi|229891678|sp|P0C9E1|TPRT_ASFWA RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 41.1 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 9/217 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
E+ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 EEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221
++ G AFQL DD+ D+ +
Sbjct: 233 TGSVEDIGMIERAAHCFGNAFQLADDIKDHDTDTGWN 269
>gi|123469801|ref|XP_001318110.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
gi|121900861|gb|EAY05887.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
Length = 338
Score = 41.1 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 89/279 (31%), Gaps = 24/279 (8%)
Query: 31 PDVVKYLIFSGGKRLRPML-TLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDV 84
D+V Y I +GGK LR +L + Y + L E + + L+ DD+
Sbjct: 36 HDLVDYTI-AGGKCLRGLLSVFGFLELTGYSPDSKEAEAAYALGWVQEILQASFLVADDL 94
Query: 85 VDDSALRRGKVAAR-----LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139
+D S LRR K S + + L + + LE L+ T
Sbjct: 95 MDKSPLRRDKPCWYCLQENKYTAVSDSYFLENVLYMIIDKYFADFPVEVVLEIKHLLHIT 154
Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE----VSSLIAGVQNSVRQALK 195
L Q + T +++ + +KTA V+S + + +
Sbjct: 155 TLRTALGQYIDMHKKEPTIDNWTLTVTNKTAYYTIWQPFLSGIVASQKIPAEVWQSKPFE 214
Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255
+ G+ FQ DD LD G+ GK + L A E+
Sbjct: 215 DALIKAGVLFQCQDDWLDQYGQAAVTGKVGTDIQDGKVSWL---FAKAMEVGNEEQRKLL 271
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
N G E ++ I + + Q A
Sbjct: 272 LENVGHHEPEKVQIVRDIYKALNI-----QKLSEEAQLA 305
>gi|322376314|ref|ZP_08050807.1| putative farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Streptococcus sp. M334]
gi|321282121|gb|EFX59128.1| putative farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Streptococcus sp. M334]
Length = 321
Score = 41.1 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 83/279 (29%), Gaps = 11/279 (3%)
Query: 42 GKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100
G R RP+LT + + A AIE IH ++++ DD++D R
Sbjct: 44 GSRFRPLLTYYGYKLFSENLNEKVYKSAIAIELIHKSSIIIDDIIDQDDKRHSIYTVHKQ 103
Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160
+ ++++ FLL + ++ E ++ D
Sbjct: 104 YSIDEALVITVFLLGKCIELLSEIDDSTIRVFSRMIIRMCQGTI----QELNIDMNVSID 159
Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220
+ I V + + Q L G LG FQL++D Y
Sbjct: 160 KIKEILDNQTSQVIQNCLVIGMKSYDPELDNQHLAIIGYKLGYLFQLLNDCEAYFNPEFT 219
Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280
+ +F + F + G + + + I++ + L
Sbjct: 220 IKYKGNHNFD------INKSRKNLCYVYLEQFLSNKEKLGLQNKDKVTNIEILLNKYSVL 273
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+ K L + + L +D+ ++
Sbjct: 274 KHIKNEVSLIEFDIKKQCEVLEKNHSMERLNYFIDYSIK 312
>gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20]
gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20]
Length = 279
Score = 41.1 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 22/291 (7%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEY 59
MK L ++ + + K + S + + ++ +GGK R L L +
Sbjct: 1 MKELF------IKHLENHLPK-VQSFHPFFNEALAKMLKAGGKHFRAQLLLGVVQNKAPH 53
Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
N + A A+EFIHT +L+HDD+ LRRG + T++LVGD L ++A
Sbjct: 54 LIPNALNAALALEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTAILVGDALNTEA 113
Query: 118 FCMVIETKSQEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
F ++ +E+++ ++ + E+ + KTA
Sbjct: 114 FLLLSNLNLKESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNLEELEFLHTHKTAK 173
Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
L +AAL++ I + + + G+ LG+ FQ+ DD++D E GK D
Sbjct: 174 LIAAALKMGCEICELDEKESEKIYQIGLKLGLIFQINDDIIDETMSEEESGKPSKHDEHK 233
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
G ++ ++ IN+ K + +L M ++ +
Sbjct: 234 NSFVNL------LGLEKAIQSKENLINECKNDLGDLDANLAHMIKSLMIKY 278
>gi|219849930|ref|YP_002464363.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219544189|gb|ACL25927.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 305
Score = 41.1 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 60/301 (19%), Positives = 116/301 (38%), Gaps = 19/301 (6%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80
+R + +I V +LI + RLR +L LA A + G++ A A+E I AT
Sbjct: 22 ERTRARATVISMVNPHLIANPTDRLRALLVLAVARLGGATGEHVAHAAAAVELIEAATRA 81
Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140
H++++D+ A R G+V W + +++VGD+L + A + + + S +
Sbjct: 82 HNNLIDEQARRLGRVKNGA-WDHGVALMVGDYLFALASGEMALSPDPRIIGLYSHAVMQI 140
Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200
EG+L ++ + Y ++ L +AA + L + + ++ G +
Sbjct: 141 CEGQLTTVTNLIPHETALATYWQRAEALAGALPAAAAQAGILCSNLPDTFLAPAARLGKH 200
Query: 201 LGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
LG+A QL ++ D + G+ P +
Sbjct: 201 LGLARQLAAEIRDLESQGSFIQSGQAPLALILAAGAAPPDEIQAVFAHP----------- 249
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ E + A I+R + L + + A +L LP S L +++
Sbjct: 250 ----TPEAVAAALPIIRTHG-LPLARESLAAQQRAAHQALSELPVGSTTPWLATLIEQSG 304
Query: 319 Q 319
+
Sbjct: 305 E 305
>gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y]
Length = 303
Score = 40.7 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--MLEYRGDNHVLL 67
+ + + + + S+ +++ ++ + GKR+RP+L L A + L
Sbjct: 21 LNDIEQRLDQLLPVESERDLVGAAMRDGALATGKRIRPLLLLLAARDLGCNATPAGLLDL 80
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
ACA+E +H A+L+ DD +DD+ LRRG+ +G ++L LLS+AF
Sbjct: 81 ACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAF 133
>gi|987496|gb|AAB41905.1| geranylgeranyl pyrophosphate synthetase homolog; Method: conceptual
translation supplied by author [Staphylococcus aureus]
Length = 43
Score = 40.7 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + + + Y KA D + LPD K L+ + R
Sbjct: 1 IDEAKAVSSKYLSKALDLISELPDGHPKSLLLSLTKKMGSR 41
>gi|321459662|gb|EFX70713.1| hypothetical protein DAPPUDRAFT_256817 [Daphnia pulex]
Length = 1746
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
+V D+ + ++ K+ + + + ++ + + + + +
Sbjct: 256 HHIVLDMENCILSPDQDSKDSTSAWCDQLWQVTARCLARQIEQAFIDQKRKIEMKRRETN 315
Query: 265 ENLKKAFIIMRENRA-LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
+ + K + + + R + ++A + L+ L +WKK L+++ +
Sbjct: 316 KEIDKILENVERLNSEIAKCHQRIDNIDRRAAEELKLLEKLAWKKMLLDLAN 367
>gi|118138423|pdb|2IHI|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138424|pdb|2IHI|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138425|pdb|2IHI|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138426|pdb|2IHI|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662582|pdb|3MAV|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662583|pdb|3MAV|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662584|pdb|3MAV|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662585|pdb|3MAV|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
Length = 395
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 55/327 (16%), Positives = 97/327 (29%), Gaps = 47/327 (14%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLA 68
+ I + I +++ D Y GGK R +L + ++ R + LA
Sbjct: 56 LEEEIKEHISKYYKLLFD---YNCL-GGKNNRGILVILIYEYVKNRDINSSEWEKAACLA 111
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE + A L+ DD++D +RR K L+ +T V D LL +
Sbjct: 112 WCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLR 171
Query: 129 ALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
V T + L+ Q + D I + + ++I
Sbjct: 172 NESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVIDINMIN 231
Query: 185 GVQNSVRQALK------------------------------SYGMNLGIAFQLVDDVLDY 214
K M +G FQ+ DD LD
Sbjct: 232 FGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDI 291
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ + GK + N + + K+ GK ++ +K +
Sbjct: 292 FGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNY---GKNNLACVKVIDSLY 348
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + E + K ++ L
Sbjct: 349 EQYKIRKHYESYEKAQKAKILSAINEL 375
>gi|187955430|gb|AAI47754.1| Pdss2 protein [Mus musculus]
gi|187955834|gb|AAI47753.1| Pdss2 protein [Mus musculus]
Length = 264
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 33/118 (27%), Gaps = 13/118 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
N + + + + + L + N + + D L
Sbjct: 124 AGPSTRNA--ACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPL 179
>gi|12856514|dbj|BAB30693.1| unnamed protein product [Mus musculus]
Length = 264
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 33/118 (27%), Gaps = 13/118 (11%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------VKYLIFSGGKRLRPMLTLATALM 56
L L ++ + + K + + ++ ++ + LR ++ L +
Sbjct: 69 SLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQ-----LRGLVVLLISKA 123
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114
N + + + + + L + N + + D L
Sbjct: 124 AGPSTRNA--ACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPL 179
>gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
Length = 302
Score = 40.7 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++VN ++++++ S ++ + +V++Y+IF GK++R + ML+ +A
Sbjct: 18 KQVNDILMQKVRSFQKIHRNLINVIRYIIF-EGKKIRSCFIYSVGSMLKVSCKQISKIAA 76
Query: 70 AIEFIHTATLLHDDVVDDSA 89
++E +H +L+HDD+
Sbjct: 77 SVECMHAYSLIHDDLPSMDN 96
>gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 413
Score = 40.7 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 105/310 (33%), Gaps = 32/310 (10%)
Query: 37 LIFSGGKRLRPMLTLATAL---MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
GGKR R + + + A+E I T L+HDDV+D S LRRG
Sbjct: 68 FTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDVMDGSRLRRG 127
Query: 94 KVAARLVWGNQT----------------SVLVGDFLLSQAFCMV------IETKSQEALE 131
+ A Q ++L GD L+ A +V + +
Sbjct: 128 RPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRVREV 187
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L +A L + + LE+ + +AG +
Sbjct: 188 WSCLRMEMVAGQYLDIQGQATSSHSEARAMRAACLKSALYSVQRPLELGAALAGADTATT 247
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QAL S G +G+AFQL DD+ D E GK G D R GKPT V +A R
Sbjct: 248 QALCSAGRCVGLAFQLRDDLHDVFEEPRRTGKPSGGDIRAGKPTYLVAVARARAEAAGDR 307
Query: 252 FW----KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSS 305
+ ++ +S +L + ++ A E + + L
Sbjct: 308 GALAVLRRSLGCADLSDADLARVRDVLVTTGARDTVEAEIDRLVAQGLRHMGAASLAP-E 366
Query: 306 WKKSLMEVVD 315
++ L ++
Sbjct: 367 GRRHLDALLR 376
>gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14]
gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14]
Length = 304
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHD 82
S ++V+ + GGKRLR L A ++ A +IE + T L+HD
Sbjct: 39 GSFAPEALELVRDMSLRGGKRLRVALLYEAARLVTSDAVAGLEEAALSIELLQTHGLIHD 98
Query: 83 DVVDDSALRRGKVAARLVWGNQTS 106
D+VDDS +RRG + + + +
Sbjct: 99 DIVDDSPVRRGAASVYYAYRERFA 122
>gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis]
Length = 379
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 105/310 (33%), Gaps = 32/310 (10%)
Query: 37 LIFSGGKRLRPMLTLATAL---MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
GGKR R + + + A+E I T L+HDDV+D S LRRG
Sbjct: 34 FTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDVMDGSRLRRG 93
Query: 94 KVAARLVWGNQT----------------SVLVGDFLLSQAFCMV------IETKSQEALE 131
+ A Q ++L GD L+ A +V + +
Sbjct: 94 RPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRVREV 153
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
L +A L + + LE+ + +AG +
Sbjct: 154 WSCLRMEMVAGQYLDIQGQATSSHSEARAMRAACLKSALYSVQRPLELGAALAGADTATT 213
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
QAL S G +G+AFQL DD+ D E GK G D R GKPT V +A R
Sbjct: 214 QALCSAGRCVGLAFQLRDDLHDVFEEPRRTGKPSGGDIRAGKPTYLVAVARARAEAAGDR 273
Query: 252 FW----KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL--RCLPDSS 305
+ ++ +S +L + ++ A E + + L
Sbjct: 274 GALAVLRRSLGCADLSDADLARVRDVLVTTGARDTVEAEIDRLVAQGLRHMGAASLAP-E 332
Query: 306 WKKSLMEVVD 315
++ L ++
Sbjct: 333 GRRHLDALLR 342
>gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514]
gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514]
Length = 189
Score = 40.7 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
L + A +A D+L+ +L + + LQR
Sbjct: 148 GLEKSRKIATQLTNRAFDALKTF-RGQA-TALEALAQYLLQR 187
>gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512]
Length = 309
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 13 EKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66
+ + + + + + + + +F GG R+RP L L + + +
Sbjct: 15 KLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATR 74
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A AIE +H A+L+HDD D++ALRRG+ ++G +VL GD L+ AF
Sbjct: 75 AAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKY 130
>gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
Length = 328
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 13 EKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66
+ + + + + + + + +F GG R+RP L L + + +
Sbjct: 34 KLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATR 93
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A AIE +H A+L+HDD D++ALRRG+ ++G +VL GD L+ AF
Sbjct: 94 AAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKY 149
>gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3]
gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
Length = 309
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 13 EKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66
+ + + + + + + + +F GG R+RP L L + + +
Sbjct: 15 KLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATR 74
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A AIE +H A+L+HDD D++ALRRG+ ++G +VL GD L+ AF
Sbjct: 75 AAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKY 130
>gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
Length = 300
Score = 40.3 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Query: 10 KDMEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRP 47
+ + ++ I K + +D + + + Y + +GGKR+RP
Sbjct: 5 EKLARIGQAIETFYAQKAVSAD---LIEAILYSVNAGGKRIRP 44
>gi|170785230|pdb|3CC9|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785231|pdb|3CC9|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785232|pdb|3CC9|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785233|pdb|3CC9|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|215794781|pdb|3EZ3|A Chain A, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794782|pdb|3EZ3|B Chain B, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794783|pdb|3EZ3|C Chain C, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794784|pdb|3EZ3|D Chain D, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|298508704|pdb|3MYS|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508705|pdb|3MYS|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508706|pdb|3MYS|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508707|pdb|3MYS|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|312207872|pdb|3LDW|A Chain A, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207873|pdb|3LDW|B Chain B, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207874|pdb|3LDW|C Chain C, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207875|pdb|3LDW|D Chain D, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312208197|pdb|3PH7|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208198|pdb|3PH7|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208199|pdb|3PH7|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208200|pdb|3PH7|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
Length = 396
Score = 40.3 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 55/327 (16%), Positives = 97/327 (29%), Gaps = 47/327 (14%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLA 68
+ I + I +++ D Y GGK R +L + ++ R + LA
Sbjct: 57 LEEEIKEHISKYYKLLFD---YNCL-GGKNNRGILVILIYEYVKNRDINSSEWEKAACLA 112
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE + A L+ DD++D +RR K L+ +T V D LL +
Sbjct: 113 WCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLR 172
Query: 129 ALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
V T + L+ Q + D I + + ++I
Sbjct: 173 NESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVIDINMIN 232
Query: 185 GVQNSVRQALK------------------------------SYGMNLGIAFQLVDDVLDY 214
K M +G FQ+ DD LD
Sbjct: 233 FGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDI 292
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ + GK + N + + K+ GK ++ +K +
Sbjct: 293 FGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNY---GKNNLACVKVIDSLY 349
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + E + K ++ L
Sbjct: 350 EQYKIRKHYESYEKAQKAKILSAINEL 376
>gi|312112561|ref|YP_003990877.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311217662|gb|ADP76266.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 316
Score = 40.3 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 22/299 (7%), Positives = 82/299 (27%), Gaps = 13/299 (4%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPML-----TLATALMLEYRGDNHV 65
++ + + ++ + ++++Y+ + GK + + Y
Sbjct: 8 EIRAFLQNHLSTNCMLEQEIIQYIFHMLHRKGK----IFKHDETYFSWGEFYTYVSSFRF 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ + T + ++ + + + + +G+ + M+ +
Sbjct: 64 DEDTCRQSVITYAAAIELLILATDIFDEISDHDQSNEIISQLSIGETVTIANALMMEAFR 123
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ Q + + + ++ + SSL+
Sbjct: 124 LILHNSKTDVYEKFAIIIHELQNACNGQWRDLHFVISEHVPTEEEYFHLIQQKSSSLVKL 183
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V ++ + + + + ++ K+ + + P + +
Sbjct: 184 VCELSDIHNQNIWGPIATDIGISGQLKNDAKDILSDHKSDLINKKATLPFIKAVEYSIEK 243
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPD 303
+ + +++ +R+ A+ + Y KA D L P+
Sbjct: 244 DNGWLLKKLHQLKANDHNSLLMQEIKNYIRKTGAIDYCFILSKVYMNKAVDQLTAHFPE 302
>gi|81997099|sp|Q8V9T7|TPRT_ASFM2 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
gi|16905412|gb|AAL31326.1|L00966_9 polyprenyl synthetase [African swine fever virus]
Length = 318
Score = 40.3 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 9/214 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
E+ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 EEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++ G AFQL DD+ D+ +
Sbjct: 233 TGTIEDIGVIERAAHCFGNAFQLADDIKDHDTDT 266
>gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group]
Length = 358
Score = 40.3 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 25/310 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN---------HVLLACAIEFIHTATLLHDD 83
++ Y + GGK R + + + +L+ +L IE++ L+ DD
Sbjct: 52 MLDYNVL-GGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDD 110
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------LSLVA 137
++D+S RRGK + + +L + + + V
Sbjct: 111 IMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVE 170
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
G+L + Y + + +A +A ++L +Y
Sbjct: 171 IQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNY 230
Query: 198 GM------NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+G+ FQ DD LD GE +GK + L V + K++
Sbjct: 231 AQVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQKGV 290
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+++ V +K + + R + E +Y +K ++ P+ + + L
Sbjct: 291 LFENYGKSDPACVAKVKDLYNELHLQRVFSEYERESY---EKLISAIEAQPNEAVRAVLK 347
Query: 312 EVVDFCLQRL 321
+ +R
Sbjct: 348 SFLHKIYKRS 357
>gi|326498241|dbj|BAJ98548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L + A AK+ L L+ + ++ R N
Sbjct: 117 GLEKSREFAEKLLSDAKEQLAYFEKEKA-APLLYLANYIAYRQN 159
>gi|170103875|ref|XP_001883152.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642033|gb|EDR06291.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 10/116 (8%)
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266
L N + R G PT P + + + I S+ +
Sbjct: 11 RRHTRLRIHINSRLCRSNTWKTRRCGPPTWPSHGPALYAWEEFQEMGE-LIRKKFESLGD 69
Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++ T R AK+ L+ LP+S K L+ + + + R +
Sbjct: 70 FEMVCSLLC---IFPKTIRR------SAKEVLQELPESVAKTGLVALTERVVGRRS 116
>gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1]
gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1]
Length = 303
Score = 40.3 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLL 67
+ + + + + S+ +++ ++ + GKR+RP+L L A L + L
Sbjct: 21 LNDIEHRLDQLLPVESERDLVGAAMREGALAPGKRIRPLLLLLAARDLGCSATPAGLLDL 80
Query: 68 ACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
ACA+E +H A+L+ DD +DD+ LRRG+ +G ++L LLS+AF +V +
Sbjct: 81 ACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAMAE 140
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-------KSKTAVLFSAALE 178
A VA ++ L + D++E D KT+ LF A+++
Sbjct: 141 GLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFCASMQ 200
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
++S++A R+ L + +NLG AFQL+DD+ D +
Sbjct: 201 MASIVAETPKEAREQLHRFSLNLGQAFQLLDDLTDGMADT 240
>gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5]
gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5]
Length = 360
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 76/352 (21%), Positives = 136/352 (38%), Gaps = 76/352 (21%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--------- 53
+ KD+E + + S + D +Y++ GK +RP+L +
Sbjct: 51 EVRAQLAKDIEVLFDY--AELPS---PLLDACRYVMTGTGKLVRPLLVASAFSSTYSHND 105
Query: 54 ---------ALMLEYRGDNHVL--LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLV 100
A +LE D + A A+E +HT +L+HDD +DD LRRG+ A +V
Sbjct: 106 TIADKDNALASLLENDSDYDMCRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIV 165
Query: 101 WGNQTSVLVGDFLLSQAFC----------MVIETKSQEALEALSLVACTLAEGELRQLSL 150
+ T++L GD L + AF + + + A + G++ L+
Sbjct: 166 FEESTALLAGDVLQTLAFEVLTADLPTFAPFDSAIASQLFAIFAPRARRMVSGQMLDLNA 225
Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
+++ D + + KT L AA+ + + AG R AL+ ++G+AFQ+ DD
Sbjct: 226 EATTGISQNDLEAIHRDKTGALIEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDD 285
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
+LD + +GK G D + K T ++
Sbjct: 286 ILDVTTSTDTLGKPAGSDEKLDKSTYVKLM------------------------------ 315
Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQRL 321
+ + A S + ++ L DSS +LM ++++ R
Sbjct: 316 --------GVNNATSYAQSLFDDGRAAISRELDDSSDTDALMALIEWLWARK 359
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 12/44 (27%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ A A+ L D+ L + F R +
Sbjct: 177 GVDKAREYAADLLAMAEAELDGF-DAERAAPLRHLARFIAYRQH 219
>gi|295400761|ref|ZP_06810738.1| heptaprenyl diphosphate synthase related protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977342|gb|EFG52943.1| heptaprenyl diphosphate synthase related protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 316
Score = 39.9 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 20/296 (6%), Positives = 79/296 (26%), Gaps = 12/296 (4%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPML-----TLATALMLEYRGDNHV 65
++ + + ++ + ++++Y+ + GK + + Y
Sbjct: 8 EIRAFLQNHLSTNCMLEQEIIQYIFHMLHRKGK----IFNHDETYFSWGEFYTYVSSFRF 63
Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
+ + + ++ + + + + +G+ + M+ +
Sbjct: 64 DEDTCTQSVIAHAAAIELLILATDIFDEISDHDQSDEIISQLSIGETVTIANAIMMEAFR 123
Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185
+ Q + + + ++ + SSL+
Sbjct: 124 LILHNSKTDVYEKFAIIIHELQNACNGQWRDLHFVISEHVPTEEEYFHLIQQKSSSLVKL 183
Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245
V ++ + + + + ++ K+ + + P + +
Sbjct: 184 VCELSDIHNQNIWGPIATDIGIAGQLKNDAKDILSDDKSDLINQKATLPFIKAVEYSIEK 243
Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + +++ +R+ A+ + Y KA D L
Sbjct: 244 DNEWLLKKLRQLKANDHNSLLMQEIKNYIRKTGAIDYCFILSKVYMNKALDQLAAY 299
>gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 332
Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 13 EKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V ++ +R+C+ E + ++Y GGKR R +L LA + + +
Sbjct: 34 QRVEQVLARRLCAGNEESTELMTAMRYATLQGGKRTRALLCLAAGALADTPAHVLDDIGA 93
Query: 70 AIEFIHTATLLHDDVVDDSA 89
AIE +H TL+HDD+
Sbjct: 94 AIEMMHACTLVHDDLPAMDN 113
>gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
Length = 277
Score = 39.9 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 15/277 (5%)
Query: 13 EKVNFLILK---RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLA 68
E+ + +++ +I S + + ++ +GGK R L L + + A
Sbjct: 3 EEFHKHLMRNLPQIPSFHPFFNEALAVMLKAGGKYFRAQLLLNVVYFYKKERFKEALDAA 62
Query: 69 CAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
A+EFIHT +L+HDD+ RR + T++LVGD L ++AF ++
Sbjct: 63 LALEFIHTYSLIHDDLPAMDNADFRRSTPTLHKSYDETTAILVGDALNTEAFLLLSRLNL 122
Query: 127 QEALEAL------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + ++ + KTA L +A+L++
Sbjct: 123 SATISLKLVETLAFNAGLNGMIIGQAIDCYFEDQKLNLKELEFLHTHKTAKLIAASLKMG 182
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
I + ++ + L G+ LG+ FQ+ DD++D E GK D + L
Sbjct: 183 CQICELDETITKQLYELGLKLGLIFQINDDIIDATLSEKESGKPTNADTHKNSFVNLLGL 242
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
+ K + ++ + +++E
Sbjct: 243 KEAKECKDKLLKECQFEG---LNANFIANLKDLIKEY 276
>gi|156098771|ref|XP_001615401.1| farnesyl pyrophosphate synthase [Plasmodium vivax SaI-1]
gi|148804275|gb|EDL45674.1| farnesyl pyrophosphate synthase, putative [Plasmodium vivax]
Length = 375
Score = 39.9 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 55/327 (16%), Positives = 96/327 (29%), Gaps = 47/327 (14%)
Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLA 68
+ I + I +++ D Y GGK R +L + ++ R + LA
Sbjct: 36 LEEEIKEHISKYYKLLFD---YNCL-GGKNNRGILVILIYEYVKNRDINSSEWEKAACLA 91
Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128
IE + A L+ DD++D RR K L+ +T V D LL +
Sbjct: 92 WCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLR 151
Query: 129 ALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
V T + L+ Q + D I + + ++I
Sbjct: 152 NESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVININMIN 211
Query: 185 GVQNSVRQALK------------------------------SYGMNLGIAFQLVDDVLDY 214
K M +G FQ+ DD LD
Sbjct: 212 FGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDI 271
Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274
G+ + GK + N + + K+ GK ++ +K +
Sbjct: 272 FGDSTKTGKVGSDIQNNKLTWPLIKTFELCSEPDKIKIVKNY---GKNNLACVKVIDSLY 328
Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCL 301
+ + E + K ++ L
Sbjct: 329 EQYKIRKHYESYEKAQKAKILSAINEL 355
>gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group]
gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa
Japonica Group]
gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group]
Length = 307
Score = 39.9 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 25/310 (8%)
Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN---------HVLLACAIEFIHTATLLHDD 83
++ Y + GGK R + + + +L+ +L IE++ L+ DD
Sbjct: 1 MLDYNVL-GGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDD 59
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------LSLVA 137
++D+S RRGK + + +L + + + V
Sbjct: 60 IMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVE 119
Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197
G+L + Y + + +A +A ++L +Y
Sbjct: 120 IQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNY 179
Query: 198 GM------NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+G+ FQ DD LD GE +GK + L V + K++
Sbjct: 180 AQVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQKGV 239
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
+++ V +K + + R + E +Y +K ++ P+ + + L
Sbjct: 240 LFENYGKSDPACVAKVKDLYNELHLQRVFSEYERESY---EKLISAIEAQPNEAVRAVLK 296
Query: 312 EVVDFCLQRL 321
+ +R
Sbjct: 297 SFLHKIYKRS 306
>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
Length = 146
Score = 39.6 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
+ ++ A + A++ L + L+ + ++ R N
Sbjct: 104 GIEKSKEFAEKLNRDAQEQLSGFDLNKS-APLIALANYIAYRQN 146
>gi|119487864|ref|ZP_01621361.1| hypothetical protein L8106_28411 [Lyngbya sp. PCC 8106]
gi|119455440|gb|EAW36578.1| hypothetical protein L8106_28411 [Lyngbya sp. PCC 8106]
Length = 53
Score = 39.6 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 16/52 (30%), Gaps = 4/52 (7%)
Query: 274 MRENRALVDTEYRAYSYGQKAKDS----LRCLPDSSWKKSLMEVVDFCLQRL 321
M ++ A + L + + K L ++ ++ RL
Sbjct: 1 MNNFGSIEYAVELADRLADEGVRHFEEDLTFIEELEPKGVLRQIANYVTTRL 52
>gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f]
gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f]
Length = 860
Score = 39.6 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 59/311 (18%), Positives = 97/311 (31%), Gaps = 59/311 (18%)
Query: 25 SDVEMIPDVVK-YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
S ++ D ++ Y + KRLRP+LTL A L L A E HTA+LL DD
Sbjct: 592 SPHDL--DAIRAYALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAASELFHTASLLLDD 649
Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141
+ RRG+ A V+ + L ++S F + + V
Sbjct: 650 LPAQDNATTRRGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVVEVVAYAG 709
Query: 142 EGELRQLSLSKNL------------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189
+ VT D L + + K++ AAL ++ G +
Sbjct: 710 STLGPERLCRGQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMMLLGRPDR 769
Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249
++ Y + GI FQ+ DDVLD + +GK+ G
Sbjct: 770 EISLVERYARHAGIVFQIRDDVLDLTAADDLLGKDTGH---------------------- 807
Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309
+ + E + + +A + L +
Sbjct: 808 -------------DTGKVNAVRAY-----GRAEAERLMHHHLTEAVGACADL--RFDTRL 847
Query: 310 LMEVVDFCLQR 320
L + R
Sbjct: 848 LEAMAHHFATR 858
>gi|213404660|ref|XP_002173102.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
japonicus yFS275]
gi|212001149|gb|EEB06809.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
japonicus yFS275]
Length = 286
Score = 39.6 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
TE R +AK L LPD K++L E+ D
Sbjct: 245 DKTEIRLDDEVNRAKKVLSVLPDVEVKQTLYEIADAI 281
>gi|85000425|ref|XP_954931.1| prenyl transferase [Theileria annulata strain Ankara]
gi|65303077|emb|CAI75455.1| prenyl transferase, putative [Theileria annulata]
Length = 468
Score = 39.6 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 65/373 (17%), Positives = 136/373 (36%), Gaps = 60/373 (16%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-------- 58
+ + I+ I ++ + Y++ + K RP+++ +L
Sbjct: 73 FIKESLFDFKKKIMDSIYTNNIKFDEAKNYILNTNCKLFRPIISFYIYHILNSSMNNSKL 132
Query: 59 ----------------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
+ L + E +H +L+HDD++D+S +RR +++ +G
Sbjct: 133 SNPAEEDSKLNISTDDEQKKLVEKLNISYELVHIGSLIHDDIIDESDVRRNLMSSHKKFG 192
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAEGELRQLSLSKNLD 155
+ SVL GDFLLS++ ++ ++ L+ L L LS
Sbjct: 193 VKFSVLFGDFLLSKSAQIITSLQNIKLVDKLSNTLDNLIHGELMYVNLNNNDLYLSYLYK 252
Query: 156 VT---------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206
+ + +K + + L + V + L G+++G++FQ
Sbjct: 253 IYLKTASLISNNISSISHFTNKYTPRYDSQLGIGIFTFSVTTLYNELLYIIGVHIGLSFQ 312
Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF-------------- 252
+ DD+LDY + +GK I D + G TLP+I G+
Sbjct: 313 MCDDLLDYNSNLEHLGKPILNDIKLGLITLPLIYLLNNGSYFSPEGKTVTTDSVSSVLSE 372
Query: 253 -----WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307
K + K+ + N+K+ ++ + + + Y + + K ++ +
Sbjct: 373 LKSLLNKYENDREKLEINNIKEFLKVVNDKNNINKCKLSIYYHLYQVKSLMKSFNQTK-T 431
Query: 308 KSLMEVVDFCLQR 320
SL+ + + R
Sbjct: 432 DSLINYIYNVVNR 444
>gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
Length = 268
Score = 39.6 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 12/265 (4%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLL 80
+I S + + ++ +GGK R L L + + A A+EFIHT +L+
Sbjct: 6 QIPSFHPFFNEALAVMLKAGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLI 65
Query: 81 HDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----- 133
HDD+ RR + T++LVGD L ++AF ++ +
Sbjct: 66 HDDLPAMDNADFRRSTPTLHKSYDETTAILVGDALNTEAFLLLSRLNLSATISLKLVETL 125
Query: 134 -SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192
++ + ++ + KTA L +A+L++ I + ++ +
Sbjct: 126 AFNAGLNGMIIGQAIDCYFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITK 185
Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252
L G+ LG+ FQ+ DD++D E GK D + L + K +
Sbjct: 186 QLYELGLKLGLIFQINDDIIDATLSEKESGKPTNADTHKNSFVNLLGLKEAKECKDKLLK 245
Query: 253 WKSTINDGKISVENLKKAFIIMREN 277
++ + +++E
Sbjct: 246 ECQFEG---LNANFIANLKDLIKEY 267
>gi|296133277|ref|YP_003640524.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Thermincola sp. JR]
gi|296031855|gb|ADG82623.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Thermincola potens JR]
Length = 526
Score = 39.6 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRG 61
D D++ V +I K I + + Y + K L P + + T M
Sbjct: 7 DTINSDLQAVEAIINKAFKIKPGYIGNFARIDDDYPV----KYLHPAVIILTGRMFGLYE 62
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ +A I+FI+ A +H + D
Sbjct: 63 EKLYSMAAIIQFIYLAANVHFRIPDYDP 90
Score = 36.9 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 285 YRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQ 319
A Y +A D LR S + +L+E+V ++
Sbjct: 209 EEAQEYFNRAIDILRHSFSASKARDTLLELVQSLIK 244
>gi|218659538|ref|ZP_03515468.1| octaprenyl-diphosphate synthase protein [Rhizobium etli IE4771]
Length = 30
Score = 39.6 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
A+D+L LPD+ WK +LMEV+DFC++R+N
Sbjct: 2 ARDALAPLPDTMWKSALMEVIDFCIERVN 30
>gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 306
Score = 39.6 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L L + ++ ++ + ++ + ++ L GK +R L L A +
Sbjct: 5 ALPALRARLLDALDRHLPTHAHAE-PSLRAALRQLASHPGKLVRAQLVLIGAEQHGWSAA 63
Query: 63 NHVLLACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
LACAIEF H A+L+ DD +D++ RRG+ G+ T++L L+++A+
Sbjct: 64 AAEQLACAIEFFHVASLVLDDLPCMDNAETRRGQPCVHRRHGDATAILAALALINRAY 121
>gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From
Campylobacter Jejuni
gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From
Campylobacter Jejuni
Length = 291
Score = 39.6 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 17/271 (6%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLL 80
++ S + + + +GGK R L L+ + + + +A A+EFIHT +L+
Sbjct: 19 KVESFHPFFNEALALXLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 78
Query: 81 HDDVV--DDSALRRGKVAARLVWGNQTSV-------LVGDFLLSQAFCMVIETKSQEALE 131
HDD+ D++ RRG + T++ +LS A
Sbjct: 79 HDDLPAXDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTL 138
Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191
A + G+ ++ ++ + + KTA L +AAL+ I + N
Sbjct: 139 AFNAGLNGXVIGQAIDC-FFEDKRLSLNELEFLHTHKTARLIAAALKXGCEICELNNEES 197
Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251
+ G+ LG+ FQ+ DD++D + GK D G ++
Sbjct: 198 NQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNL------LGLEQAIK 251
Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVD 282
++ +N+ + +E L + +N +
Sbjct: 252 TKENLLNECEQDLEKLNEKLAQXIQNLIIQY 282
>gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5]
Length = 297
Score = 39.6 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 13 EKVNFLILKRICSDVEM-----IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66
+ + + + + + + + +F GG R+RP L L + + + +
Sbjct: 15 KLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKHPELATR 74
Query: 67 LACAIEFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120
A AIE +H A+L+HDD D++ALRRG+ ++G +VL GD L+ AF
Sbjct: 75 AAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLAGDALIVMAFKY 130
>gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
Length = 538
Score = 39.6 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 23/277 (8%)
Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
DN + A E IH +LLHDDV+DDS RRG +A +GN+ S+L GD+LL++A +
Sbjct: 264 DNQCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIF 323
Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVS 180
T S + + S V +L +GE Q +L N KTA LFS
Sbjct: 324 AGTGSPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACI 383
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
++++ +++ Q + G+++G+AFQL DD LDY+ + N K I D +N T P++
Sbjct: 384 AILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYKIDDNT-NKPILNDLKNNIKTAPLLF 442
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
IN + +++ ++ + ++ E + + +KA D L
Sbjct: 443 ----SYNYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKNELCSLLHIKKASDILYS 498
Query: 301 L-----PDSSWK------------KSLMEVVDFCLQR 320
L S+ K ++L+ ++ L R
Sbjct: 499 LISHCNKPSTNKNNTKHDDIKQSSEALINLILNVLSR 535
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
L ++ ++ I I ++ + I + + Y+ GKR R +L++
Sbjct: 157 LCESKIKNIDEYIYNIIKTNYKNIDEFITYIYLYKGKRFRVILSIL 202
>gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 364
Score = 39.2 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 25/273 (9%)
Query: 32 DVVKYLIFSGGKR--------LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83
+ +Y GK LRP L + +L + + ++L+ DD
Sbjct: 67 EPFEYTRSLPGKNTVGKVIESLRP--------WLNISDRSAAVLTDVMTMLQNSSLMLDD 118
Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---SLVACTL 140
+ D S LRRG AA + +G ++ +++++ V E + L +A L
Sbjct: 119 IEDGSQLRRGAPAAHVKYGLSQTINSTTYIIAKVVSEVQTHLRLECAKVLSVLRKLAEEL 178
Query: 141 AEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198
L Q +++ L + + + L+
Sbjct: 179 QTLTLGQALDLNWTFNKTCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDELRHLI 238
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK----REKNFWK 254
LG +Q+ DD + + K +D GK + P+I + + +
Sbjct: 239 TLLGRYYQIRDDYQNIASDEYTTKKGFCDDLSEGKFSFPLIHLLEHSPNASTLHKMIYDG 298
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRA 287
+++GK+S E M+E +L T+
Sbjct: 299 QPVDEGKMSEEAKSYIISQMKEVGSLDYTQEVL 331
>gi|229188212|ref|ZP_04315288.1| hypothetical protein bcere0004_57140 [Bacillus cereus BGSC 6E1]
gi|228595232|gb|EEK52976.1| hypothetical protein bcere0004_57140 [Bacillus cereus BGSC 6E1]
Length = 551
Score = 39.2 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS---SWKKSLMEVVDFCL 318
++ + +K + L D+ + + +KA DSL + + K+ M+V+ + +
Sbjct: 446 LNGDQKQKIRTRILNYGGLQDSIDKINNSHKKAFDSLNNIQEQSFYEAKE--MDVISYNI 503
Query: 319 QRLN 322
+RLN
Sbjct: 504 ERLN 507
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 39.2 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCL 318
GK + ++L A L + A ++AK L + + L + ++
Sbjct: 243 GKTAGKDLASAKTTYPSLVGLERSREIADELIEEAKSMLTTYD--PARAAPLYALAEYIR 300
Query: 319 QRLN 322
R N
Sbjct: 301 CRKN 304
>gi|198433716|ref|XP_002125418.1| PREDICTED: similar to castor homolog 1, zinc finger [Ciona
intestinalis]
Length = 886
Score = 39.2 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 22/276 (7%), Positives = 59/276 (21%), Gaps = 20/276 (7%)
Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
+ +H + T D + + ++ + +
Sbjct: 444 CPHINRDHFHCTDSDCNFQRFTNKSDVIRHYNMHKKRDNSLAHGFMRFAPTDDCTSQFGN 503
Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176
T + + V + ++ + KN + +++ +
Sbjct: 504 CHLNGKSTHYHCLYTSCTKVYTSTSDVMTHENFHKKNQQFVSNGFQRYRATESCGMQDCP 563
Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236
+ + D E + T
Sbjct: 564 FIMQRTTHFHCTRPDCNFTFKNKCDIEKHKAYHMRDDAYARQGFKKFYKNESCKFPSCTW 623
Query: 237 PVILAFQRGTKREKNF-----WKSTINDGKISVENLK---------KAFIIMRENRALVD 282
+R +F + + K +L A ++ +
Sbjct: 624 NRTANHFHCLRRNCDFAFTSTSQMVSHKRKHDRHDLMGTDGATSSPAAPVLFEQRNG--- 680
Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSL-MEVVDFC 317
++ + AK L +P S +L + F
Sbjct: 681 --NLTSAFKEAAKKVLASIPSSVAAAALPRNLAAFS 714
>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
Length = 298
Score = 39.2 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 13/86 (15%)
Query: 13 EKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLR------PMLTLATALMLEYRGDNHV 65
+ ++ + + I + + +L F+ P L +A + R + +
Sbjct: 46 DDIDAHLRRVITIREPFSVFKPMHHLTFA------APETTAPALCIAACELFGGRRELAI 99
Query: 66 LLACAIEFIHTATLLHDDVVDDSALR 91
A A+ +H A+ H+ + R
Sbjct: 100 AAASALHLMHAASYFHEHIPLTDQTR 125
>gi|255965421|gb|ACU45015.1| geranylgeranyl diphosphate synthase [Pfiesteria piscicida]
Length = 90
Score = 39.2 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312
+ + +E K A M +L T R ++ ++ + L L + + +SL+E
Sbjct: 1 NILRQRTEDIELKKYAVDYMTLTGSLEYTRKRIFTLVEELYEMLSELGGNQFLQSLIE 58
>gi|83590129|ref|YP_430138.1| hypothetical protein Moth_1281 [Moorella thermoacetica ATCC
39073]
gi|83573043|gb|ABC19595.1| hypothetical protein Moth_1281 [Moorella thermoacetica ATCC
39073]
Length = 234
Score = 39.2 bits (89), Expect = 0.90, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKR--------ICSDVEMIPDVVKYLIFSGGKRLRPMLTLA 52
M L ++E V + K + + + ++ + + P L L
Sbjct: 1 MLALFHFLQPELEMVRRRLDKETSWRKDQFLGFVLPTLNEIDRDFL--------PALVLL 52
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91
+A Y G + LA + I A+L+H V A++
Sbjct: 53 SAHGQGYFGPRALSLAAVFQLIFMASLIHSRVNQGVAMQ 91
>gi|196006065|ref|XP_002112899.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens]
gi|190584940|gb|EDV25009.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens]
Length = 382
Score = 39.2 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 49/339 (14%), Positives = 103/339 (30%), Gaps = 59/339 (17%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV------------VKYLIFSGGKRLRPMLT 50
L ++ V + K + S ++ + KY + +
Sbjct: 64 SFRHLLTDEVSNVAVHMKKLLGSRHPLMHTIRGLINNSYNENKAKYSL----------IV 113
Query: 51 LATALMLE-----------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99
L A LA E I A ++H VV+ + L
Sbjct: 114 LLIAKAAGKSQMIEEQSVDGIYPTQRSLAEITEIIRMAQIIHTGVVNLPEPIASEEDKEL 173
Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLSLSKNLD 155
GN+ +VL+GDFLL++A + + ++ + ++ + S + Q + ++
Sbjct: 174 QLGNKMAVLIGDFLLAKASNGLAKLENTQVVQLMSEAISEMMEGEFLCSTIQDVIKSDII 233
Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215
+ + L S + + + + + ++G NL QL ++ +
Sbjct: 234 DYVNLWEQRTLLRKGSLLSKSCQCALKLVNHSEEAQMVANNFGQNLAYTQQLSLELSALQ 293
Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275
+ G + L + K+ ++ +K +
Sbjct: 294 LDDT------GSQIDYTSLPALLALQNSEDKATLFSSNIQFYKHQKLVLDEVKTVYE--- 344
Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314
+Y K DSL D K +L ++V
Sbjct: 345 -------------TYKSKLLDSLAYFQDCDAKTALEKIV 370
>gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
Length = 382
Score = 39.2 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322
A +A++ L LP ++ L + L R +
Sbjct: 344 DLATDLVDRARELLDGLPLPGPQREQLDALCHHVLNRDS 382
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 39 FSGGKRLRPMLTLATALML---------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+GGK +RP LTL V LA + E +H A L+HDDVVD
Sbjct: 68 LAGGKLIRPRLTLIAWRSFTAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDVVDRDW 127
Query: 90 LRRGKVA 96
RRG+
Sbjct: 128 RRRGRPT 134
>gi|229891676|sp|P0C9E2|TPRT_ASFK5 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 39.2 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 71/214 (33%), Gaps = 9/214 (4%)
Query: 13 EKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65
E+ ++ I + + Y + GGK +RP++ + +
Sbjct: 54 EEFETILNNAIEDGDFKGQLTEPCSYAL-RGGKYIRPIILMEIVRACQLQHSFGAPIYPA 112
Query: 66 LLACAIEFIHTATLLHDDVVDD-SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124
A A+E+ H A+L+ DD+ + ++R + L+ I
Sbjct: 113 EAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALTMQGFQNICR 172
Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184
+ E G L +S +L+ L KT F A + ++
Sbjct: 173 QVDWIKENCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPEKTIPFFKIAFIMGWVLG 232
Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
A++ G AFQL DD+ D+ +
Sbjct: 233 TGTIEDIGAIERAAHCFGNAFQLADDIKDHDTDT 266
>gi|311897507|dbj|BAJ29915.1| hypothetical protein KSE_41280 [Kitasatospora setae KM-6054]
Length = 106
Score = 38.8 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVV 314
+ +++ + AL T RA + +A+ + LP + LM+++
Sbjct: 39 TADDIPAIRDAFVSSGALRATGRRAEALADRARTVIPTLPLGGPATEYLMDLL 91
>gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
35098]
gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
35098]
Length = 275
Score = 38.8 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 1 MKML--EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58
M + + + ++ I I + +I + + Y + + GKR+R L L T +
Sbjct: 1 MNDIDYRQRLVDNKNLLDDEIKTYIKGE-SLIEEAMLYALEA-GKRIRASLFLETRRLSR 58
Query: 59 YRGDNHVLLAC-AIEFIHTATLLH 81
+ D + LL AIE I +L+H
Sbjct: 59 NQIDKNDLLFALAIEMIQAYSLVH 82
>gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
Length = 269
Score = 38.8 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+ + + + GKRLRP L A A
Sbjct: 6 LNRALSHTSTNPGKRLRPQLLQAAARATGNP 36
>gi|312376899|gb|EFR23859.1| hypothetical protein AND_11966 [Anopheles darlingi]
Length = 451
Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 249 EKNFWKSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306
N I G+ SV+N+ K + L T+ + A L LP +
Sbjct: 378 HDNTLYDEIEKGRRSVDNIDYTKVHEAVLNGPGLEKTKILQRKHSLAAMQVLTELPATDA 437
Query: 307 KKSLMEVV 314
+ +L ++
Sbjct: 438 RTALQNII 445
>gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
Length = 300
Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Query: 10 KDMEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRP 47
+ + ++ I K + +D + + + Y + +GGKR+RP
Sbjct: 5 EKLARIGQTIEGLYAQKVVSAD---LIEAILYSVNAGGKRIRP 44
>gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate
Synthase From Rhodobacter Capsulatus
gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate
Synthase From Rhodobacter Capsulatus
Length = 297
Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87
+ D Y GGKRLR L + +A + A A+E +H +L+H D+
Sbjct: 30 LRDAXAYAAQ-GGKRLRAFLAIESAAIHGISXAQAXPAALAVEALHAYSLVHDDXPCXDN 88
Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121
LRRG W + T+VL GD L + AF +
Sbjct: 89 DDLRRGLPTVHKKWDDATAVLAGDALQTLAFELC 122
>gi|322800772|gb|EFZ21658.1| hypothetical protein SINV_01398 [Solenopsis invicta]
Length = 352
Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 56/335 (16%), Positives = 116/335 (34%), Gaps = 37/335 (11%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--- 57
M+M ++L D V I K + V GGK++R + + L
Sbjct: 28 MEMAKNLITPD---VADWIEKMLQYTVP------------GGKKIRSLTLIYAYKSLVSK 72
Query: 58 ----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113
E +LA +E + + ++ +D+ + S LRRG+ + + L
Sbjct: 73 DQLTEDNIRLVRILAWCVELMQASLIVIEDIQNQSLLRRGQPCWYRCNDIDKAAINDYIL 132
Query: 114 LSQAFCMVIETKSQEALEA-----------LSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
L +++ ++ V + +LS NLD+ D
Sbjct: 133 LQNTIYYILQKYFKDKECYVSLVETFQEALFMTVMGQYLDFFSTELSKRPNLDLFTMDRY 192
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQN---SVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219
I +S L V + ++ + +++G FQ+ D L+ G+ +
Sbjct: 193 SSIVEYKESHYSVILPVVVAMHLAGIKDLNMFKQANVILLDIGHLFQVQIDYLNCFGDSD 252
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
GK+ + + L V + +++ K + ++ +K+ FI + A
Sbjct: 253 VYGKDSTDIQKGKCTWLIVAALLRATSEQRKVLKECYGILDPQKIKRVKQIFIDLDLPNA 312
Query: 280 LVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEV 313
+ Y+ + + LP S + L ++
Sbjct: 313 YNMYKEHMYNVINGRIEQISCELPHSLFLNLLEKL 347
>gi|228962654|ref|ZP_04123960.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228797045|gb|EEM44349.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 298
Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 14/272 (5%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
LT+ M + + A A+E+++ A + D D T +
Sbjct: 35 LTILHFEMFNGSSNEIIKAASAVEYLNLALDIID----DIQDEDNAGNTWGSINKATLLN 90
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
L+ + ++I+ + + L Q + EE YL +IK K
Sbjct: 91 YAILLIFISQKILIDIELMKKDAILRYFNELTITAIQGQHLDLNMVCTNEEQYLEIIKKK 150
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ L S A+ + LIA ++ ++ Y +GI+ QL++D + + + D
Sbjct: 151 SGALTSLAVVIGVLIAQDNYALESIIE-YATYIGISGQLLNDA------SDVIRLDDKSD 203
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV--ENLKKAFIIMRENRALVDTEYR 286
RN K T PV+ ++ ++ EN + + ++A+ T
Sbjct: 204 VRNKKLTFPVLYLLNHPSQNLTIVKSYYNDEIGFGELIENRELIIKEILNSKAIEYTLIY 263
Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
+ QKA + ++ + S+ KK E +DF L
Sbjct: 264 KEIFVQKALEIVKGIAFSNQKKE-YEFIDFLL 294
>gi|261884768|ref|ZP_06008807.1| geranyltranstransferase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 124
Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLL 80
++ S D + +++ +GGK R L L L+ + +A A+E +HT +L+
Sbjct: 13 KVDSFHPHFNDSLSWVLKAGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVEMLHTYSLI 72
Query: 81 HDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117
HDD +D++ LRRG + + ++VL GD L + A
Sbjct: 73 HDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHA 111
>gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
NGR234]
gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Geranyltranstransferase
gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
NGR234]
Length = 332
Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 13 EKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
++V + + +C++ + ++Y GGKR R +L LA + + +
Sbjct: 42 KRVEQALARLLCAEDHGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHILDDVGA 101
Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
AIE +H TL+HDD+ LRRG + +G T++LVGD L + AF + +
Sbjct: 102 AIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAP 161
Query: 128 EALEA------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
V+ A G V + + + + K L A++ + +
Sbjct: 162 GDNRIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKCGALVRASVRMGA 221
Query: 182 LIAGVQN----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237
L A ++ ++ AL Y G+A Q+VDD+LD + +GK G+D KPT
Sbjct: 222 LCAIAEDAADATLYCALDHYSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCA 281
Query: 238 VIL 240
I+
Sbjct: 282 SIM 284
>gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 358
Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 70/315 (22%), Positives = 113/315 (35%), Gaps = 40/315 (12%)
Query: 42 GKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95
GK +RP L + L A E +HTA L+HDDV+D LRRG+
Sbjct: 50 GKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDVIDRDVLRRGQP 109
Query: 96 AARLVWGNQTSVLV----------------------GDFLLSQAFCMVIETKSQEALEAL 133
A ++ A C ++ EA +
Sbjct: 110 AVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAADTARAAEAAAVV 169
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-----VLFSAALEVSSLIAGVQN 188
A A GEL + L + EE I + A L +L+AG
Sbjct: 170 FDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAPLRAGALLAGADP 229
Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ +A+ G +LG A+Q++DDVL G+ E GK+ D R GK T+ R
Sbjct: 230 DLARAMGEAGADLGAAYQVIDDVLGVFGDPGETGKSADGDLREGKATVLT------AHGR 283
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWK 307
++ ++ G + +++ A + A A +A++ + LP D + +
Sbjct: 284 RIPAVRALLDAGPATPADIEAARRALEAAGAREHALDVAAELTVRARERIAALPLDETVR 343
Query: 308 KSLMEVVDFCLQRLN 322
+ L R +
Sbjct: 344 AEFADACHAVLTRRS 358
>gi|71425811|ref|XP_813173.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
Brener]
gi|70878032|gb|EAN91322.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 346
Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 45/308 (14%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALML--------- 57
++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + IEF+ L+ DD++D S +RRGK G T + D ++
Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131
Query: 116 QAFCMVIETKSQEALEA------------------LSLVACTLAEGELRQLSLSKNLDVT 157
+++ ++ ++ + +++ +
Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTD 191
Query: 158 EEDYLHVIKSK-------TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
++ I + + + + ++ +G FQ+ DD
Sbjct: 192 FAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDD 251
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
V+D ++GK + L V G + N G +
Sbjct: 252 VMDCFTPPEQLGKVGTDIEDAKCSWLAVTFL---GKANAAQVAEFKANYGDKDPAKVAVV 308
Query: 271 FIIMRENR 278
+ E
Sbjct: 309 KRLYSEAN 316
>gi|322829693|gb|EFZ32996.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 362
Score = 38.4 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 17/222 (7%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALML--------- 57
++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + IEF+ L+ DD++D S +RRGK G T + D ++
Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
+++ ++ L + C + + + D + + +
Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNKLDPEVAQPMTTD 191
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
E + I + +Y + L + + +
Sbjct: 192 FAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLISEAAASVEMN 233
>gi|310800265|gb|EFQ35158.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 742
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 97/266 (36%), Gaps = 15/266 (5%)
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ + +H A+L+ DDV D+S +RRG +A +V+G + +L+ + + +
Sbjct: 478 IRTIVRIMHNASLMLDDVQDNSPVRRGSPSAHVVFGTAQTTNSASYLMIKCVDLARRLGN 537
Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186
LS + + +Y ++ KT LF A + A
Sbjct: 538 DTLSCLLSELGQLHLGQSHDLAWTFHCRAPSMPEYYSHLEQKTGGLFRMAS--RMMRASA 595
Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV----------NEMGKNIGEDFRNGKPTL 236
+ LG +QL DD D E + I R +
Sbjct: 596 TQNKHLDACKLMSLLGRLYQLRDDYQDITSESLSTYDDLDEGSFTLPLIHALQRENEHGD 655
Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+ + + + ++ S+ N+G++SVE ++ E+ +L T + +
Sbjct: 656 VQLHSILQSARAARSASTSSNNNGRLSVETKLLIREVLEESGSLEYTRGVIRGLYDETRA 715
Query: 297 SLRCLPDSS---WKKSLMEVVDFCLQ 319
L L + S K ++ ++ F L+
Sbjct: 716 VLNALENESGPGGKNWMLRLLTFQLK 741
>gi|159471277|ref|XP_001693783.1| exostosin-like glycosyltransferase [Chlamydomonas reinhardtii]
gi|158283286|gb|EDP09037.1| exostosin-like glycosyltransferase [Chlamydomonas reinhardtii]
Length = 611
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 24/280 (8%), Positives = 67/280 (23%), Gaps = 18/280 (6%)
Query: 24 CSDVEMIPDVVKYLIFS-------GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76
SD ++ + +L + GG R +A M + + T
Sbjct: 213 SSDAYVLQRAIHHLRHAHPWFNATGGGR---HFVIAVGDMGRLESER-----GPLSANVT 264
Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
A R R N T +++ ++ + T+S+ + ++
Sbjct: 265 FVSHWGLASSKKAERLNSSPWRASHRNATDIVLPVYISLRKLEKYGITRSRHHPKFATMA 324
Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196
+ E + + S++ +
Sbjct: 325 PPEIRERNGPLFWFAGRICQDRSKPATDGVWPNCPGAMG---YSAMTRQAVHFHHWDRPG 381
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y + G + G + + ++ + + +
Sbjct: 382 YFVAPGDKNYSRHLLTSKFCFGAMGGGHGQRQLQAALAGCVPVVIGDGVLEAWEPYLDWN 441
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296
+++ ++ + I+ + +KA
Sbjct: 442 DFGVRVAEADIPRLHTILGAIGPEEYARKLIVQHQRKALA 481
>gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2]
gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2]
Length = 229
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
GK + ++ + + T + +A+ L ++L + F +
Sbjct: 169 GKATGKDAAAGKATLVSLHGIDWTRQQLSGLVAQAESLLAPF--GEDAETLKQAARFIAE 226
Query: 320 RLN 322
R N
Sbjct: 227 RQN 229
>gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 435
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 41 GGKRLRPMLTLATALML----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
GG+RLRP L R + + A+E + T L+HDDV+D S LRRG+ A
Sbjct: 127 GGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDVMDSSRLRRGRPA 186
Query: 97 AR 98
Sbjct: 187 LH 188
>gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 390
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 41 GGKRLRPMLTLATALML----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
GG+RLRP L R + + A+E + T L+HDDV+D S LRRG+ A
Sbjct: 82 GGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDVMDSSRLRRGRPA 141
Query: 97 AR 98
Sbjct: 142 LH 143
>gi|222528083|ref|YP_002571965.1| ABC transporter ATP-binding protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222454930|gb|ACM59192.1| ABC transporter ATP-binding protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 431
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 267 LKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV-DFCLQR 320
L + + + + E Y +A + + L D K++L + D L R
Sbjct: 104 LMELKNAVENSNGIDKNLEKEIVKYINQAIEKINLLED---KETLKKFALDKILNR 156
>gi|293353562|ref|XP_001070116.2| PREDICTED: serine/threonine/tyrosine interacting protein [Rattus
norvegicus]
Length = 393
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 26/297 (8%)
Query: 41 GGKRLRPMLTLATAL-MLEYRGDNHVLLAC------AIEFIHTATLLHDDVVDDSALRRG 93
GGK R + + +LE R + L + + L+ DD+++ S R
Sbjct: 105 GGKFTRGLTVVQAFKELLEPRKQDAENLEWALAVGWCVGLLQAXFLMSDDIMNPSLTRHS 164
Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFC-----MVIETKSQEALEALSLVACTLAEGELRQL 148
++ G ++ L + + + S + + +L
Sbjct: 165 QICWYQKPGIGLAINDALLLEASIYRLLKFSCREQPYSFCRVTSNRPGRLSLITAPQGHA 224
Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208
L ++ + + + + + L + +G FQ+
Sbjct: 225 DLGRHTEKRYKSIVKYKTASLYSFYLPITAAVCLAGISGEKEHANAMKILLEMGEFFQVQ 284
Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268
DD LD G+ K + N L V Q + ++ + N G+ E +
Sbjct: 285 DDSLDPHGDTCVTRKVSTDIQDNRCSWLAVQCLLQTTPQLQQVLDE---NSGQKDPEKVA 341
Query: 269 KAFIIMRENRAL--VDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQRLN 322
+ + + + + TE R ++ L L S + +E+ D +R N
Sbjct: 342 QVKALCXDLQCVFFKYTEDR--------QNHLSXLTEQCSALSTFLELADKIYKRRN 390
>gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 363
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 38 IFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96
+ SGGKR R L A A + + A E T+ L+HDD++D ++ RR + +
Sbjct: 48 LLSGGKRTRAALLAAGYACATAEDREPAISAGAAAELYQTSALIHDDILDAASTRRSQPS 107
Query: 97 AR 98
A
Sbjct: 108 AH 109
>gi|56756549|gb|AAW26447.1| SJCHGC00702 protein [Schistosoma japonicum]
Length = 325
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 62/149 (41%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ + Y + GK +R +L A L+ +++ I+ +H A+L+ DD+
Sbjct: 13 SEKVVMEPYNYTCSTNGKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE 72
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D S LRRGK AA V+G +S+ +++ A + + E+++ + L G+
Sbjct: 73 DGSYLRRGKPAAHCVFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQG 132
Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ + E +
Sbjct: 133 MDIYWRSSFKCPSESEYEAMVLCKTGGLF 161
>gi|85543983|pdb|1YHK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase
gi|85543984|pdb|1YHL|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
Diphosphate Synthase With Risedronate, Dmapp And Mg+2
gi|288563001|pdb|3IBA|A Chain A, Crystal Structure Of The Complex Of Trypanosoma Cruzi
Farnesyl Diphosphate Synthase With Zoledronate, Ipp And
Mg2+
gi|288563002|pdb|3ICK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Minodronate And Isopentenyl Disphosphate
gi|288563003|pdb|3ICM|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Isopentenyl Pyrophosphate, Mg2+ And
1-(2-
Hydroxy-2,2-Bis-Phosphono-Ethyl)-3-Phenyl-Pyridinium
gi|288563004|pdb|3ICN|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Isopentenyl Pyrophosphate And
3-Fluoro-1-(2-
Hydroxy-2,2-Bis-Phosphono-Ethyl)-Pyridinium
gi|288563005|pdb|3ICZ|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With
1-(2,2-Bis-Phosphono-Ethyl)-3-Butyl-Pyridinium And
Isopentenyl Pyrophosphate
gi|288563006|pdb|3ID0|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With
3-Fluoro-1-(2-Hydroxy-2,2-Bisphosphono-Ethyl) Pyridinium
gi|14647139|gb|AAK71861.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi]
Length = 362
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 45/308 (14%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALML--------- 57
++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + IEF+ L+ DD++D S +RRGK G T + D ++
Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131
Query: 116 QAFCMVIETKSQEALEA------------------LSLVACTLAEGELRQLSLSKNLDVT 157
+++ ++ ++ + +++ +
Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTD 191
Query: 158 EEDYLHVIKSK-------TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210
++ I + + + + ++ +G FQ+ DD
Sbjct: 192 FAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDD 251
Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270
V+D ++GK + L V G + N G +
Sbjct: 252 VMDCFTPPEQLGKVGTDIEDAKCSWLAVTFL---GKANAAQVAEFKANYGDKDPAKVAVV 308
Query: 271 FIIMRENR 278
+ E
Sbjct: 309 KRLYSEAN 316
>gi|315225498|ref|ZP_07867310.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|314944534|gb|EFS96571.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
Length = 672
Score = 38.4 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV---VDFCLQ 319
++K I+RE + + + ++ KD + D+ KKSL + D ++
Sbjct: 151 NEVEKIKSILREYKGKKNQQKELKEQVKQIKDEIDKHNDNELKKSLENLEKSADNLIE 208
>gi|326930885|ref|XP_003211568.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like,
partial [Meleagris gallopavo]
Length = 850
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
I++E+++L+ + + +A ++ L DSS +++L DF L R
Sbjct: 66 ILQESKSLLKCQTVSDQAVAEALCAIMLLEDSSPRQAL---ADFLLARK 111
>gi|154508212|ref|ZP_02043854.1| hypothetical protein ACTODO_00706 [Actinomyces odontolyticus ATCC
17982]
gi|153797846|gb|EDN80266.1| hypothetical protein ACTODO_00706 [Actinomyces odontolyticus ATCC
17982]
Length = 993
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS---LMEVVDF 316
+ ++++KA ++ T+ R Y Q+AK ++ LP + + V F
Sbjct: 747 LDPDDVEKANDLIYSGSTTAKTQQRVIYYLQRAKAAIERLPIEEQLEIQGLMKSFVRF 804
>gi|322795978|gb|EFZ18602.1| hypothetical protein SINV_01245 [Solenopsis invicta]
Length = 272
Score = 38.0 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 84/250 (33%), Gaps = 8/250 (3%)
Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
+ +N + + + LL DD+ D + R+ A ++G ++ ++
Sbjct: 28 WFKISPENLQQIEDILNILLNVCLLLDDIQDKAIFRKDFPVAHSIYGVSNTINAANYAQL 87
Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175
A + + + + G+ + +N E+ +I K
Sbjct: 88 NALEKMGSLHPEAIKITIEGLQEFYR-GQGMDMYSKENFICPTEEEYKMIARKNGWFLKL 146
Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235
+ + +S + L S + + +Q+ DD + + + N D GK +
Sbjct: 147 TYRL----MKLFSSYEEDLSSLINMIELFYQIFDDYCN-LCQETDNDHNYCSDISEGKFS 201
Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295
PVI A + ++ + V + F ++ + ++ T+ +K +
Sbjct: 202 FPVIHALTKNPDDKQILN--ILKQRTTDVRMKRYCFNLLESSGSIKYTKDALEELNKKIR 259
Query: 296 DSLRCLPDSS 305
+ L +
Sbjct: 260 LEIERLGGNP 269
>gi|126650453|ref|ZP_01722676.1| ComQ [Bacillus sp. B14905]
gi|126592609|gb|EAZ86608.1| ComQ [Bacillus sp. B14905]
Length = 297
Score = 38.0 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 95/283 (33%), Gaps = 25/283 (8%)
Query: 38 IFSG---GKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
I +G GK L D+ +A A+E + + + D L+
Sbjct: 35 IEAGFSFGK-----LCYWHYESFSDSVNDDIYKIAAAVELVILSFDIID------DLQDK 83
Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153
+ S+ V +L A + ET + A++++ + Q N
Sbjct: 84 DSDNSWSRTPELSLNVALAMLIMASKTIDETSFEHKRAAITILEECALKSISGQQLDLLN 143
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
E+ Y+H+I K+ L + + + V + +++YG +GI Q+ +D+
Sbjct: 144 NCRDEDSYIHMITLKSGSLTAMSC--LIGEVLAKGEVSKEVEAYGKYIGIIQQIKNDI-- 199
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
+ G + I+ ND +++ + K+A
Sbjct: 200 --QSLKTWGPKNDLLNKRFS---LPIIYLLSLKNDVSKSVADYYNDDIVTILDHKEAENE 254
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVD 315
+ A+ Y KA + L + + K L +++
Sbjct: 255 LTNGGAIRYAITVKNVYKLKAINDLENIELNDLAKDYLQKLIK 297
>gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 124
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
L ++ Q A L + + L E+ ++ ++R+N
Sbjct: 84 LEKSQEMVVELTQNAVKILDRFGEKAL--FLKELSNYLIERVN 124
>gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 274
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYR 60
K +++ L++ ++ I K S+ + I + + Y + GKR+R L L T + L+
Sbjct: 3 KEYKEIFLQNKNLIDQEIAKYFNSESK-IEEAMLYSMED-GKRVRATLFLETRKLSLKEI 60
Query: 61 GDNHVLLACAIEFIHTATLLH 81
N L A AIE I +L+H
Sbjct: 61 SKNDFLFALAIEMIQAYSLVH 81
>gi|285808231|gb|ADC35765.1| hypothetical protein [uncultured bacterium 293]
Length = 107
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 6/42 (14%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ A Q ++++LR + ++L ++ + + R
Sbjct: 66 GVDGAVQLARELAQASQEALRPF--GARARALRDLALYVVAR 105
>gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus]
Length = 369
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64
+D + + SGGKR+RP L L L +G
Sbjct: 35 AADYRRLWAAARDA-ASGGKRIRPRLVLGAYDALAAQGAPA 74
>gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
Length = 291
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRP 47
K + +D + + + Y + +GGKR+RP
Sbjct: 21 KEVSAD---LTETILYSVEAGGKRIRP 44
>gi|116179884|ref|XP_001219791.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51]
gi|88184867|gb|EAQ92335.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51]
Length = 352
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 59/137 (43%)
Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85
+++ YL GK R L A LE ++ ++ + +HTA+LL DDV
Sbjct: 176 KDKVLTGPFDYLNGHPGKDFRSALVKAFDAWLEVPPESLEVITKVVGMLHTASLLVDDVE 235
Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145
D+S LRRG A ++G ++ +++ A + + K+ +A+ + L G+
Sbjct: 236 DNSQLRRGYPVAHAIFGIPQTINSSNYIYFCALQELQKLKNPKAVSIFAEELVNLHRGQG 295
Query: 146 RQLSLSKNLDVTEEDYL 162
L L ED
Sbjct: 296 MDLFWRDTLTCPTEDDY 312
>gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
Length = 215
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 7/179 (3%), Positives = 22/179 (12%), Gaps = 2/179 (1%)
Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142
+ + G F + + +
Sbjct: 13 TCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIF 72
Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202
L + + + +
Sbjct: 73 TCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIF 132
Query: 203 IAFQL--VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
D+ G + G T + + ++
Sbjct: 133 TCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLHWCWGIFTCVHW 191
>gi|255542718|ref|XP_002512422.1| respiratory burst oxidase, putative [Ricinus communis]
gi|223548383|gb|EEF49874.1| respiratory burst oxidase, putative [Ricinus communis]
Length = 888
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291
+ + + DG+I+ E +K+ + L + RA Y
Sbjct: 203 HEFWEQITDHSFDARLQTFFDMVDKNADGRITEEEVKEIIALSASANKLSKIQERAEEYA 262
Query: 292 QKAKDSLRCLPDS 304
+ L PD+
Sbjct: 263 ALIMEELD--PDN 273
>gi|188475812|gb|ACD50074.1| putative geranylgeranyl diphosphate synthase [uncultured
crenarchaeote MCG]
Length = 333
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 46 RPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105
R + + + L A+ FI +HDD++DDS ++ + G
Sbjct: 58 RSGVLALACEAVGGNPAEVLPLQVALLFIDATMDIHDDIIDDSVSKKNRGTVYGKLGKGN 117
Query: 106 S-------VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158
+ ++ G L Q+ + + Q L ++ + L +++L +
Sbjct: 118 TLLIGDGFMVKGFGYLFQSLEHLAKDLRQRVLAEVTYFLYEVVAAHLSEVALKGKKWRVK 177
Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218
+ I + +++ ++ AL +YG N+G+ D +D
Sbjct: 178 PNDYLQILMRKGADIEGRMKLGAICGRGSARDVDALTTYGRNVGVLLAAKSDFVDIFEPS 237
Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278
M R +P+ + + +++ + + +S ++ + +
Sbjct: 238 ELM-------HRIKYEVMPLQILYAIKSRKHGPKIREILQKDILSPKDCDMLLETIYMTK 290
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319
+V S ++A +L L DS K L ++ +
Sbjct: 291 EIVILNDLLRSKEKEAVQALDTLADSRVKGELRLLIASLTE 331
>gi|18478919|gb|AAL73357.1|AF386102_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi]
Length = 425
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALML--------- 57
++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 75 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 134
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + IEF+ L+ DD++D S +RRGK G T + D ++
Sbjct: 135 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 194
Query: 116 QAFCMVIETKSQ 127
+++ ++
Sbjct: 195 KSWTQIMAWHYF 206
>gi|228470150|ref|ZP_04055059.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
gi|228308288|gb|EEK17143.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
Length = 69
Score = 37.2 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS--LMEV 313
+ + E + K + E + + Y KA+ +L CL + +++ L
Sbjct: 1 MRRPNEQADEKISKVKALYDEMEVAIQVQALVRDYLAKAQKALECLESFTGREATLLRAF 60
Query: 314 VDFCLQR 320
V +R
Sbjct: 61 VSKLAER 67
>gi|71409298|ref|XP_807002.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
Brener]
gi|70870903|gb|EAN85151.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 425
Score = 37.2 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALML--------- 57
++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 75 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 134
Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115
E + + IEF+ L+ DD++D S +RRGK G T + D ++
Sbjct: 135 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 194
Query: 116 QAFCMVIETKSQ 127
+++ ++
Sbjct: 195 KSWTQIMAWHYF 206
>gi|71897095|ref|NP_001025878.1| conserved oligomeric Golgi complex subunit 1 [Gallus gallus]
gi|53136504|emb|CAG32581.1| hypothetical protein RCJMB04_30a15 [Gallus gallus]
Length = 954
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321
I++E+++L+ ++ + +A ++ L DSS +++L DF L R
Sbjct: 171 ILQESKSLLKSQTVSDQAVAEALCAIMLLEDSSPRQAL---ADFLLARK 216
>gi|145628196|ref|ZP_01783997.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae 22.1-21]
gi|144979971|gb|EDJ89630.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae 22.1-21]
Length = 50
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPD 32
+ ++ L DM+KVN IL ++ SDV +I
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQ 40
>gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain
Ankara]
gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata]
Length = 384
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 56/346 (16%), Positives = 105/346 (30%), Gaps = 57/346 (16%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPD----------------VVKYLIFSGGK 43
M +LT D+ K N L+ +E+ I + V+Y + GGK
Sbjct: 1 MDSSYNLTKDDIHKCNGLLKDFFPKFLELAINELKTYGLSQNVLLYYSYAVQYNLQ-GGK 59
Query: 44 RLRPMLTLATAL-------------------MLEYRGDNHVLLACAIEFIHTATLLHDDV 84
LR + L+T M ++A +E + T+ L+ DD+
Sbjct: 60 MLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQTSFLVADDI 119
Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144
+D S RR LV S + D + I + + + + T
Sbjct: 120 IDKSTKRRSNTCWYLVPTIGVSNAINDVMFLYTLIYRILFNTMKDSKKFLEIIETFNRVS 179
Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-------- 196
+ + + SK A A + + +
Sbjct: 180 MTTILGQHLDIYESNSDVLFHDSKEATKLFAEICKNKTSYYSFFLPLKLGMMLSGVELSN 239
Query: 197 --------YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248
+ +G FQ DD LD G+ + GKN + L ++
Sbjct: 240 LFYSKVESISILIGTLFQAQDDYLDCYGDPDNFGKNGTDIQTRKCSWLLSQALTIASEEQ 299
Query: 249 EKNFWKSTINDGKISVENLKKAFIIMR--EN--RALVDTEYRAYSY 290
+ ++ +D V+ +K + + ++ + E + Y
Sbjct: 300 KNLIKENIGHDDNSKVDVVKSIYRELEMDKHFLNYTLYAENKINRY 345
>gi|331237827|ref|XP_003331570.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309310560|gb|EFP87151.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 450
Score = 36.9 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 15/42 (35%)
Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311
A ++ ++ A+ + A + L DS K L
Sbjct: 409 AKEMVHKSDAIHSSYQLASHHIHLYLSQLNSFNDSKAKAGLE 450
>gi|205363969|gb|ACI04497.1| CrtE [uncultured bacterium]
Length = 351
Score = 36.9 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 39/89 (43%)
Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89
+ + + GK R LT + + LA +E +H +L+ DD+ D+S
Sbjct: 47 LGAPLHEFLQRPGKEFRAELTRIFFALGGRKEPPPENLALIVEVLHAGSLIVDDIQDESE 106
Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
RRG A + G ++ G++L A+
Sbjct: 107 ERRGGPALHQIHGVPLALNAGNWLYFWAY 135
>gi|323702888|ref|ZP_08114546.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
DSM 574]
gi|323532146|gb|EGB22027.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
DSM 574]
Length = 255
Score = 36.9 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ Y +A +L+ LP+ K L +++
Sbjct: 210 HQQIQKYFDRAMQALKGLPNRLEKDLLEKLIHSL 243
>gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
Length = 175
Score = 36.9 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 15/48 (31%), Gaps = 4/48 (8%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLP----DSSWKKSLMEVVDFCLQRLN 322
+ E Y ++ + L+ L D L+ + R N
Sbjct: 128 GMEKAEAMVEQYTEEGRSLLQSLDRNAVDGEALDFLLSFSQYLCSRRN 175
>gi|221056306|ref|XP_002259291.1| Farnesyl pyrophosphate synthase [Plasmodium knowlesi strain H]
gi|193809362|emb|CAQ40064.1| Farnesyl pyrophosphate synthase, putative [Plasmodium knowlesi
strain H]
Length = 375
Score = 36.9 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 49/325 (15%), Positives = 92/325 (28%), Gaps = 44/325 (13%)
Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLL 67
+ I + I +++ D Y GGK R +L + + + L
Sbjct: 35 ALEEEIKEHISKYYKLLFD---YNCL-GGKYNRGILVILIYEYVKNRDINSIEWEKAACL 90
Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------------------- 98
A IE + + L+ DD++D RR K
Sbjct: 91 AWCIEILQASFLVADDIMDKGEKRRKKYCWYLLKDVETKNAVNDILLLYNSIYKLIEIYL 150
Query: 99 --LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156
D L ++T + + + + V
Sbjct: 151 RNESCYVDILSTFRDATLKTIIGQHLDTNIFSDKYTDLNKEIDVNNINVPEQEIININMV 210
Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSL---IAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
E Y +++ KTA V + V N + + ++ M +G FQ+ DD LD
Sbjct: 211 NFEVYKNIVIHKTAYYSFFLPIVCGMLLGGIAVDNLIYKKIEGISMLMGEYFQVHDDYLD 270
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
+ GK + N + + K+ + V+ ++ +
Sbjct: 271 VFADSKNTGKVGTDIQNNKLTWPLIKAFELCSESDKMKIVKNYGQNNLACVKVIESIYEQ 330
Query: 274 MRENRALVDTEYRAYSYGQKAKDSL 298
+ + D E A + L
Sbjct: 331 YKIKKHYEDYERAQKERILSAINEL 355
>gi|298241116|ref|ZP_06964923.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Ktedonobacter racemifer DSM 44963]
gi|297554170|gb|EFH88034.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Ktedonobacter racemifer DSM 44963]
Length = 938
Score = 36.9 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 28/281 (9%), Positives = 71/281 (25%), Gaps = 21/281 (7%)
Query: 46 RPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105
RP L L A L + V + + T H ++ L +
Sbjct: 435 RPRLCLGMAQSLFWTTPPDVAESWVHDARRAWTRAHQR--EEQRLMAQDAHEPEAPLHLL 492
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
+ L +F ++ + Q++ ++ ++
Sbjct: 493 GEIAALHGLIASFYQGDAGAARAFCQEALTHLEEQQWATQVQVTFAQARANVAQEQ---- 548
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
V + ++ R Y + + +
Sbjct: 549 -----VPSTMQQLQAAWRWIKVEGDRALESIYCCERAWEMTIAGKLHQAWQWSQQAIHA- 602
Query: 226 GEDFRNGKPTLPVILAFQRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282
+ +PT + + + + I + + I+ AL+
Sbjct: 603 LQTIEGHQPTHLCWPYTYQARILHEWNQLEEAHHRAEQAIQLGEQAEILAILPLAYALLV 662
Query: 283 TEYRAYSYGQKAKDSLRCLP------DSSWKKSLMEVVDFC 317
+ ++A+ + + L S ++ +L+ VD
Sbjct: 663 RIALSQGRLEEAQKASQQLEYTWRVMSSPYRTALLSCVDQM 703
>gi|241739844|ref|XP_002405165.1| hypothetical protein IscW_ISCW010870 [Ixodes scapularis]
gi|215505669|gb|EEC15163.1| hypothetical protein IscW_ISCW010870 [Ixodes scapularis]
Length = 233
Score = 36.9 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317
+ A + +K K+SL L K L+++ D+
Sbjct: 103 VISYARSEADEHARKLKESLESLG---AKVFLVKLADYI 138
>gi|258597332|ref|XP_001347966.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
3D7]
gi|254832668|gb|AAN35879.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
3D7]
Length = 376
Score = 36.9 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 89/301 (29%), Gaps = 43/301 (14%)
Query: 41 GGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GGK R +L + ++ R + +A IE + + L+ DD++D RR K
Sbjct: 59 GGKNNRGILVILIYEYVKNRDINCNEWEKVACIAWCIEILQASFLVADDIMDKGETRRNK 118
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCM-------------------------------VIE 123
L+ + V D L ++
Sbjct: 119 HCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLITSFREATLKTIVGQHLD 178
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + + + Q + + + Y ++I KTA V +
Sbjct: 179 TNIFSDKYSHIDKDIDVNNINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQ 238
Query: 184 AGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
G + + +++ + +G FQ+ DD +D G+ + GK + N +
Sbjct: 239 MGGISLDNLLYKKVENIAILMGEYFQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKA 298
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
N GK +V +K I K +++
Sbjct: 299 FELCSQPE---KEDIIRNYGKDNVTCIKFINDIYEHYNIRDHYVEYEKKQKMKILEAINQ 355
Query: 301 L 301
L
Sbjct: 356 L 356
>gi|329767035|ref|ZP_08258563.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
gi|328837760|gb|EGF87385.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
Length = 113
Score = 36.5 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 6/42 (14%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
+ + E + + A + L + L++ ++ L+R
Sbjct: 74 GIEECEELLQKHTENAINIANKLNNG----LLVDFANYLLKR 111
>gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 310
Score = 36.5 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 7/119 (5%)
Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256
Y ++GIA Q+ +D+ D + K +LPV+ + S
Sbjct: 197 YANDIGIAAQIDNDIDALYRWDE------KNDIKAKKKSLPVLYMLASKRDNLLKQYFSN 250
Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVV 314
D +K M + A + ++ Y +KA + L D +K L ++
Sbjct: 251 HIDYNELYAQKEKVIQQMEQEGAFYYAKVMSHIYKEKALQEIEKLDVDDRYKSVLKTII 309
>gi|328793673|ref|XP_396224.4| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
Length = 418
Score = 36.5 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 31/290 (10%)
Query: 31 PDVVKYLIFSGGKRLR--PMLT---LATA--LMLEYRGDNHVLLACAIEFIHTATLLHDD 83
++++Y + GGKR R P++ L + + E +LA +IE + + DD
Sbjct: 108 KELLEYTVPKGGKR-RSVPIVIAYKLLASQDQLTEENIRLARILAWSIEIMQAFHTMIDD 166
Query: 84 VVDDSALRRGKVAARLV----------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133
++D++ +RR + + + C
Sbjct: 167 ILDNANMRRNQPTWHVKVGLGAINDGLILETCIYKLIKKHFKSKNCYTDIVDILLKYNTK 226
Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV---QNSV 190
+ L + ++N ++ D + + FS L S + +
Sbjct: 227 AAHGECLDILISTDWAKNENFNLFSMDRYNHLIKYKTSYFSFILPFSLAMRFAGIIDPEM 286
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ + + +G FQ+ +D LD E+G+ G D + GK T P+++A +R T +K
Sbjct: 287 HREAEKILIKIGHLFQVQNDFLD-YYSKEEIGEKSGTDIQEGKCTWPIMIALERATAEQK 345
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRA-------LVDTEYRAYSYGQK 293
K G E +K+ I + +T +Y Q+
Sbjct: 346 RILKECY--GVADEEKVKRVKEIYDKIGISNIYFDYEEETHNLLNTYIQQ 393
>gi|301610667|ref|XP_002934879.1| PREDICTED: baculoviral IAP repeat-containing protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 1263
Score = 36.5 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 24/240 (10%), Positives = 66/240 (27%), Gaps = 29/240 (12%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-----------L 51
L + L +ME+ + I +++ Y + S GKRL+ +L L
Sbjct: 35 DLRAVVL-EMEETHRNIRQQMPKGP-------NYSMRSEGKRLKSLLALGPTSTWSPCEL 86
Query: 52 ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD 111
A A ++ + + +L + + +++ K Q +
Sbjct: 87 AAAGFF------FTGISDSCQCFCCGLVLCRQSLTTTPMQKHKQCNPRCGFVQGKDVGNI 140
Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVIKS 167
+ + + S + + + + I
Sbjct: 141 SKYEVCLQPLEPNERFKKDAMKSEESRLGTYKGWPLYAAANPRALAQAGFYFTGGRDIVQ 200
Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
+ + +++ + + ++ D + +Y G + G + +
Sbjct: 201 CFSCEGCLGNWEENDDPWKEHAKWFPECVFLRSEKSEAEISDYIDNYYGFTSFQGMSFCD 260
>gi|29124957|gb|AAO63552.1| putative farnesyl pyrophosphate synthase [Plasmodium falciparum]
Length = 362
Score = 36.5 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 89/301 (29%), Gaps = 43/301 (14%)
Query: 41 GGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94
GGK R +L + ++ R + +A IE + + L+ DD++D RR K
Sbjct: 59 GGKNNRGILVILIYEYVKNRDINCNEWEKVACIAWCIEILQASFLVADDIMDKGETRRNK 118
Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCM-------------------------------VIE 123
L+ + V D L ++
Sbjct: 119 HCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLITSFREATLKTIVGQHLD 178
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T + + + Q + + + Y ++I KTA V +
Sbjct: 179 TNIFSDKYSHIDKDIDVNNINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQ 238
Query: 184 AGVQNSV---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
G + + +++ + +G FQ+ DD +D G+ + GK + N +
Sbjct: 239 MGGISLDNLLYKKVENIAILMGEYFQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKA 298
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
N GK +V +K I K +++
Sbjct: 299 FELCSQPE---KEDIIRNYGKDNVTCIKFINDIYEHYNIRDHYVEYEKKQKMKILEAINQ 355
Query: 301 L 301
L
Sbjct: 356 L 356
>gi|294940462|ref|XP_002782796.1| hypothetical protein Pmar_PMAR025055 [Perkinsus marinus ATCC 50983]
gi|239894774|gb|EER14591.1| hypothetical protein Pmar_PMAR025055 [Perkinsus marinus ATCC 50983]
Length = 507
Score = 36.5 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 12/211 (5%), Positives = 36/211 (17%), Gaps = 2/211 (0%)
Query: 51 LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW--GNQTSVL 108
A N A E + + + +
Sbjct: 161 YMAAKECCPEMMNKCPYMAAKECCPAMMMNKCPYMAAKECCPEMMNKCPYMAAKKCCPEM 220
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ A + + C +K + + +K
Sbjct: 221 MNRCPYMAAKECCPAMMMNKCPYMAAKECCPAMMMNKCPYMAAKECCPEMMNKCPYMAAK 280
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
+ + A Y ++++ + + +
Sbjct: 281 ECCPAMMMSKCPYMAAKECCPAMMNKCPYMAAKECCPEMMNKCPYMAAKECCPAMMMNKC 340
Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND 259
+ + K +N+
Sbjct: 341 PYMAAKACCPKMTSKCPYMAAKECCPEMMNN 371
>gi|302781466|ref|XP_002972507.1| hypothetical protein SELMODRAFT_97417 [Selaginella moellendorffii]
gi|300159974|gb|EFJ26593.1| hypothetical protein SELMODRAFT_97417 [Selaginella moellendorffii]
Length = 895
Score = 36.5 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ L + + DG+IS E +K+ ++
Sbjct: 197 MTNAEQISKRDLYEFWLQISDQSFDARMQIFFDMCDKNADGRISEEEVKEVIMLSASANK 256
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDS 304
L + +A Y + L PD+
Sbjct: 257 LSKLKEQAEEYAALIMEELD--PDN 279
>gi|342075|gb|AAA36834.1| apolipoprotein A-1 [Macaca fascicularis]
Length = 267
Score = 36.5 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 6/123 (4%)
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L + +L ++ G + K + R
Sbjct: 122 QPYLDDFQKKWQEEMELYRQKVEPLRAELHEGTRQKLHELHEKLSPLGEEVRDRARAHVD 181
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ L ++EN R Y KA + L L + K +L
Sbjct: 182 ALRTHLAPYSDELRQRLAARLEALKENGG-----ARLAEYHAKASEHLSTLSE-KAKPAL 235
Query: 311 MEV 313
++
Sbjct: 236 EDL 238
>gi|302821806|ref|XP_002992564.1| hypothetical protein SELMODRAFT_135543 [Selaginella moellendorffii]
gi|300139633|gb|EFJ06370.1| hypothetical protein SELMODRAFT_135543 [Selaginella moellendorffii]
Length = 902
Score = 36.5 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279
+ L + + DG+IS E +K+ ++
Sbjct: 204 MTNAEQISKRDLYEFWLQISDQSFDARMQIFFDMCDKNADGRISEEEVKEVIMLSASANK 263
Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDS 304
L + +A Y + L PD+
Sbjct: 264 LSKLKEQAEEYAALIMEELD--PDN 286
>gi|169829787|ref|YP_001699945.1| transcriptional regulator of comG and srfA [Lysinibacillus
sphaericus C3-41]
gi|168994275|gb|ACA41815.1| transcriptional regulator of comG and srfA [Lysinibacillus
sphaericus C3-41]
Length = 297
Score = 36.5 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 25/283 (8%)
Query: 38 IFSG---GKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93
I +G GK L R ++ +A A+E + + + D L+
Sbjct: 35 IDAGFSFGK-----LCCLHFEAFSNSRNNDIYKIAAAVELLILSFDIID------DLQDK 83
Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153
+ S+ V +L A + ET + A+ ++ + Q N
Sbjct: 84 DSDNSWSRTPELSLNVALAMLIMASKTIDETSFEHKRAAIKILEECALKSISGQQLDLLN 143
Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213
E+ Y+ +I K+ L + + + V Q +++YG +GI Q+ +D+
Sbjct: 144 NCRDEDSYVQMITLKSGSLTAMSC--LIGEVLAKGEVSQEVEAYGKYIGIIQQIKNDI-- 199
Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273
+ G + I+ ND +++ + K+A
Sbjct: 200 --QSLKAWGPKNDLLNKRFS---LPIIYLLSQKNDVSKSVADYYNDDIVTILDHKEAENE 254
Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSS-WKKSLMEVVD 315
+ A+ Y KA L + + K L +++
Sbjct: 255 LTNGGAIRYALTVKNVYKLKAISYLENVELNDLAKDYLQKLIK 297
>gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 332
Score = 36.5 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 15 VNFLILKRICSDVE---MIPDVVKYLIFSGGKRLR 46
V + + +C++ + + ++Y GGKR R
Sbjct: 44 VEQALARLLCAEDDGETELMAAMRYATLHGGKRTR 78
>gi|145494606|ref|XP_001433297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400414|emb|CAK65900.1| unnamed protein product [Paramecium tetraurelia]
Length = 2633
Score = 36.5 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 15/203 (7%), Positives = 32/203 (15%), Gaps = 1/203 (0%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L A D + A L + D + + N
Sbjct: 361 LCYLCASGTSLSPDMTQCMPQAPTTPVVDCLYYGDSSNKCQQCQNYQILD-FDNNLCKSD 419
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+ + E S+
Sbjct: 420 FCFTQIKNCQNCYQYRTINIVQQKTFYHCTKCEEYYYPDFFTGTCEHCPNHCSSCWQYSQ 479
Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
T + + A+ Y FQL ++ +
Sbjct: 480 TYNFTLYNEIPKIIQNRKIYYLDGAINIYCSECESGFQLYNNQCLGCTSNCMIPATGVAT 539
Query: 229 FRNGKPTLPVILAFQRGTKREKN 251
++ + +
Sbjct: 540 LKSSCLYKSKYALCSQCYEPLYQ 562
>gi|238878783|gb|EEQ42421.1| glutamate-cysteine ligase [Candida albicans WO-1]
Length = 685
Score = 36.1 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 11/69 (15%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
+K++ L D+ V + S ++I +++ RLR L L
Sbjct: 574 IKLVIKLIATDL--VPQALNNSTISKEQLIEELI---------RLRSYLCLLATRANGEI 622
Query: 61 GDNHVLLAC 69
+
Sbjct: 623 PTTAHWVRN 631
>gi|62858705|ref|NP_001017083.1| autocrine motility factor receptor [Xenopus (Silurana) tropicalis]
gi|89266846|emb|CAJ83385.1| autocrine motility factor receptor [Xenopus (Silurana) tropicalis]
gi|112419321|gb|AAI21832.1| autocrine motility factor receptor [Xenopus (Silurana) tropicalis]
Length = 635
Score = 36.1 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 62/282 (21%), Gaps = 18/282 (6%)
Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108
L + A + Y H L A E + T V+ G T V
Sbjct: 192 LAVLCA-IAGYTHGMHTLAFMAAECMLVTTRTTHVVLRYVIHLWDLNHEGTWEGKGTYVY 250
Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV---I 165
DF++ + + L ++ + QL + +
Sbjct: 251 YTDFVMELSHLSIDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEFQRRIRRHKNYLRV 310
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
F+ A ++ L + L E +
Sbjct: 311 VGNMEAHFAVATPEELEANSDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTC 370
Query: 226 GEDFRNGKPTLPVILAFQR-------------GTKREKNFWKSTINDGKISVENL-KKAF 271
T + + G R + DG L +
Sbjct: 371 RMSLNMADGTRTRVEQQRENQDQNAVPLAVTEGRPRLNHHNHFFHFDGSRFASWLPSFSV 430
Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
+M L + A+ L P + L ++
Sbjct: 431 EVMHTTNILGLAQASNSQLNAMARQVLDMFPQVPYHLVLQDL 472
>gi|72160952|ref|YP_288609.1| RNA polymerase sigma factor RpoE [Thermobifida fusca YX]
gi|71914684|gb|AAZ54586.1| RNA polymerase sigma-70 factor, ECF subfamily [Thermobifida fusca
YX]
Length = 256
Score = 36.1 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 26/96 (27%), Gaps = 10/96 (10%)
Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277
G + + + G +E+ + A +
Sbjct: 96 TKAFGSFHQFKEGTNLKAWLYRILTNTFINSYRKKQREPRQAGTEDIEDWQLARAASHTS 155
Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313
L E ++L LPD+ K++L E+
Sbjct: 156 SGLKSAEA----------EALEHLPDTDVKRALQEL 181
>gi|162951920|ref|NP_001106116.1| apolipoprotein A-I [Papio anubis]
gi|109108768|ref|XP_001090535.1| PREDICTED: apolipoprotein A-I isoform 1 [Macaca mulatta]
gi|109108772|ref|XP_001090774.1| PREDICTED: apolipoprotein A-I isoform 3 [Macaca mulatta]
gi|56404986|sp|P68292|APOA1_MACFA RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I;
AltName: Full=Apolipoprotein A1; Flags: Precursor
gi|56404987|sp|P68293|APOA1_PAPHA RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I;
AltName: Full=Apolipoprotein A1; Flags: Precursor
gi|86653|pir||JS0079 apolipoprotein A-I precursor - baboon
gi|176567|gb|AAA35380.1| apolipoprotein A-I (ApoA-I) [Papio anubis]
gi|342071|gb|AAA36832.1| apolipoprotein A-I [Macaca fascicularis]
Length = 267
Score = 36.1 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 6/123 (4%)
Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250
+ L + +L ++ G + K + R
Sbjct: 122 QPYLDDFQKKWQEEMELYRQKVEPLRAELHEGTRQKLHELHEKLSPLGEEVRDRARAHVD 181
Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310
+ L ++EN R Y KA + L L + K +L
Sbjct: 182 ALRTHLAPYSDELRQRLAARLEALKENGG-----ARLAEYHAKASEHLSTLSE-KAKPAL 235
Query: 311 MEV 313
++
Sbjct: 236 EDL 238
>gi|145609315|ref|XP_367595.2| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
gi|145016701|gb|EDK01131.1| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
Length = 725
Score = 36.1 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 12/246 (4%)
Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ + + +H A+L+ DDV D+S LRRG +A +V+G ++ ++ +
Sbjct: 451 VPPETLATIRTIVRIMHNASLMLDDVHDNSPLRRGSPSAHIVFGTAQTINSAGYVTIKCV 510
Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178
+ +AL L L G+ L+ + + + + L
Sbjct: 511 DLARRRLGDDALSCLLSELGQLHLGQSHDLAWTFHCRAPSMAGYYSHLEQKTGGL-FRLA 569
Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR-----------GEVNEMGKNIGE 227
+ A + LG +QL DD D +
Sbjct: 570 ARMMRASATQNRHLDACGLMSLLGRLYQLRDDYQDITSETLSTYDDLDEGSFTLPLIHAL 629
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287
+ + + + Q ++ + ++ E I+ E +L T
Sbjct: 630 EREDKHGGVQLRSILQSARAARSASAAASSDGARLPAETKLLVREILEEAGSLEYTRAVI 689
Query: 288 YSYGQK 293
+
Sbjct: 690 RDLYDE 695
>gi|168005371|ref|XP_001755384.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693512|gb|EDQ79864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1312
Score = 36.1 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 73/277 (26%), Gaps = 10/277 (3%)
Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102
KR+ + L++ R + L +A+ + +V D +
Sbjct: 942 KRIHSFILLSSIKCC-LRTEKASHLKKVRLSSSSASWSYFEVYGDVQ--------GHLSP 992
Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162
+V + + + + E ++R + D
Sbjct: 993 LDETVCRTPYEQTLHREGTSRVLAAWKKIQSWSPTKSRIEEKIRDRPIPSQKCAARSDRA 1052
Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222
+ + S + +++ + I+ + R
Sbjct: 1053 REQSATMYNRKGSGPRSSWYTPLQAEAYIGQSRNFHSSRAISQPPTKKMNTKRQLAVAAI 1112
Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALV 281
+ + L + + N+ + + ++++ IM + A
Sbjct: 1113 TQALTPSLHPQKRGQGELGLCMANFLKSFTSPAQTNETRFCEDRVRQSLEIMLKITDAAE 1172
Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318
S+ A++ L LP + L ++D L
Sbjct: 1173 REVKAIQSWINDAENHLHSLPSERDIERLEALLDNLL 1209
>gi|195578229|ref|XP_002078968.1| GD22254 [Drosophila simulans]
gi|194190977|gb|EDX04553.1| GD22254 [Drosophila simulans]
Length = 987
Score = 35.7 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 71/279 (25%), Gaps = 33/279 (11%)
Query: 53 TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA-------ARLVWGNQT 105
A M +Y +L +E I ++ + + + A
Sbjct: 193 FARM-DYVDKKQRMLDLEMEMIWQSSEFLKNSNIFTGMLYNHYAAPPGFCFDINCEDAPI 251
Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165
A + ++ + G+ Q + + + +
Sbjct: 252 IDGDSYDNNVDARVSEFIDYVKNMAKSYRSTHIMVPMGDDFQYEDAAVNFKNMDKLIKYV 311
Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225
+ + + S+ L QL + + +
Sbjct: 312 NDRQSTGSQVNVFYSTP---------------SCYLYELHQLKQTWPNKTEDFFPYSSDS 356
Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-------NDGKISVENLKKAFIIMRENR 278
+ + P F R K ++NL +A IM+ +
Sbjct: 357 HSYWTGYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGTQHSEDLDNLSQAMGIMQHHD 416
Query: 279 ALVDTEYRA--YSYGQKAKDSLRCLPDSSWKKSLMEVVD 315
A+ TE +A Y + ++ +S + +L + +
Sbjct: 417 AVTGTEKQAVASDYDRMLFKAIVGAENS-ARDALRSLTN 454
>gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC416]
Length = 301
Score = 35.7 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 9 LKDMEKVNFLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL--MLEYR 60
D+ +++ + + + + ++ + GKR+RP+L L A +
Sbjct: 12 ESDLLQLHHALQAHLEHLLPAGQQADRVRAAMRAGTLAPGKRIRPLLLLLAARDMGCDVA 71
Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDS--ALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ LACA+E +H A+L+ DD+ +RRG+ A +G ++L LLS+AF
Sbjct: 72 QQGILDLACAVEMVHAASLILDDIPSMDNARMRRGRPAIHCEYGENVAILAAVALLSRAF 131
Query: 119 C 119
Sbjct: 132 E 132
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.111 0.269
Lambda K H
0.267 0.0342 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,660,127,302
Number of Sequences: 14124377
Number of extensions: 74895376
Number of successful extensions: 296105
Number of sequences better than 10.0: 5728
Number of HSP's better than 10.0 without gapping: 5120
Number of HSP's successfully gapped in prelim test: 608
Number of HSP's that attempted gapping in prelim test: 285190
Number of HSP's gapped (non-prelim): 7280
length of query: 322
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 183
effective length of database: 2,879,505,227
effective search space: 526949456541
effective search space used: 526949456541
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.7 bits)