RPSBLAST alignment for GI: 254780755 and conserved domain: COG0142
>gnl|CDD|30491 COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]. Length = 322
Score = 266 bits (681), Expect = 6e-72
Identities = 126/328 (38%), Positives = 202/328 (61%), Gaps = 13/328 (3%)
Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
L L LK + ++ L+ + + SD E++ + ++YL+ +GGKRLRP+L L A L
Sbjct: 1 SDLLALLLKRLARIEELLSELLSGSDPELLLEAMRYLLLAGGKRLRPLLVLLAAEALGID 60
Query: 61 ----GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
G++ + LA AIE IHTA+L+HDD++DD LRRGK +G T++L GD LL+
Sbjct: 61 LETGGNDALDLAAAIELIHTASLIHDDLMDDDDLRRGKPTVHAKFGEATAILAGDALLAA 120
Query: 117 AFCMVIETKSQ--EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
AF ++ + S+ EA++AL+ L G+ L +N VT E+YL VI+ KTA LF+
Sbjct: 121 AFELLSKLGSEALEAIKALAEAINGLCGGQALDL-AFENKPVTLEEYLRVIELKTAALFA 179
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
AA + +++AG + +AL+ YG NLG+AFQ+ DD+LD G+ E+GK +G D + GKP
Sbjct: 180 AAAVLGAILAGADEELLEALEDYGRNLGLAFQIQDDILDITGDEEELGKPVGSDLKEGKP 239
Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294
TLPV+LA ++ + +K G++ ++A ++R++ A+ + A +Y +KA
Sbjct: 240 TLPVLLALEKANEDQKLLRILLEGGGEV-----EEALELLRKSGAIEYAKNLAKTYVEKA 294
Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322
K++L LPDS K++L+E+ DF ++R
Sbjct: 295 KEALEKLPDSEAKEALLELADFIIKRKY 322