RPSBLAST alignment of GI: 254780755 and protein with PDBid: 1uby
>1uby_A FPS, farnesyl diphosphate synthase; transferase, isoprene biosynthesis, cholesterol biosynthesis; HET: DMA; 2.40A {Gallus gallus} SCOP: a.128.1.1 PDB: 1ubw_A* 1ubv_A* 1ubx_A* 1fps_A Length = 367
Score = 149 bits (377), Expect = 8e-37
Identities = 63/327 (19%), Positives = 117/327 (35%), Gaps = 29/327 (8%)
Query: 20 LKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALMLEYRGDNH-------VL 66
L + D V L GGK R + +A L G +
Sbjct: 42 LTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALA 101
Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126
+ IE A+L+ DD++D S RRG++ G + FLL + V++
Sbjct: 102 VGWCIELFQAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYC 161
Query: 127 QEA---LEALSLVACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSA 175
++ + L L T + EL Q+ S +EE Y ++K KTA
Sbjct: 162 RQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFY 221
Query: 176 A--LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
++ + K+ + +G FQ+ DD LD G+ + +G D ++ K
Sbjct: 222 LPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGD-PALTGAVGTDIQDNK 280
Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293
+ V+ QR T ++ + G+ E + K + + S ++
Sbjct: 281 CSWLVVQCLQRVTPEQRQLLEDNY--GRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRR 338
Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320
++ + + K+ + + +R
Sbjct: 339 LQELIEKHSNRLPKEIFLGLAQKIYKR 365