RPSBLAST alignment of GI: 254780755 and protein with PDBid: 1yhl
>1yhl_A Farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, bisphosphonate, dimethyl allyl pyrophosphate sulfate, FPPS, transferase; HET: DMA RIS; 1.95A {Trypanosoma cruzi} PDB: 1yhk_A* 1yhm_A* Length = 362
Score = 155 bits (393), Expect = 9e-39
Identities = 63/364 (17%), Positives = 124/364 (34%), Gaps = 48/364 (13%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATA 54
M +E L ++V +L ++ S E+ P+ +YL GGK R M + A
Sbjct: 1 MASMERF-LSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 59
Query: 55 LMLEYRGDNH-----------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103
+ + IEF+ L+ DD++D S +RRGK G
Sbjct: 60 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 119
Query: 104 QTSVLVGDFLLSQAFCMVIETKS-------QEALEALSLVACTLAEGELR---------- 146
T + D ++ +++ ++ ++ L V A G++
Sbjct: 120 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNK 179
Query: 147 ------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--LKSYG 198
Q + + T Y ++K KT V L + + ++
Sbjct: 180 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVA 239
Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258
+G FQ+ DDV+D ++GK G D + K + + + + +K+
Sbjct: 240 HLIGEYFQVQDDVMDCFTPPEQLGKV-GTDIEDAKCSWLAVTFLGKANAAQVAEFKANY- 297
Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSWKKSLMEVVDF 316
G + + E D ++ + + L ++ +S+ V +
Sbjct: 298 -GDKDPAKVAVVKRLYSEANLQADFAAYEAEVVREVESLIEQLKVKSPTFAESVAVVWEK 356
Query: 317 CLQR 320
+R
Sbjct: 357 THKR 360