RPSBLAST alignment of GI: 254780755 and protein with PDBid: 2j1p

>2j1p_A Geranylgeranyl pyrophosphate synthetase; transferase, isoprene biosynthesis, multifunctional enzyme, carotenoid biosynthesis; HET: GRG; 1.8A {Sinapis alba} PDB: 2j1o_A Length = 293
 Score =  118 bits (297), Expect = 1e-27
 Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 35/290 (12%)

Query: 9   LKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67
           ++  + VN  +   +       I + ++Y + +GGKR+RP+L +A   ++       +  
Sbjct: 18  IRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPA 77

Query: 68  ACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125
           ACA+E IHT +L+HDD+   D+  LRRGK     V+G   +VL GD LLS AF  +    
Sbjct: 78  ACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASAT 137

Query: 126 S-----QEALEALSLVACTLAEGELRQLSL-------SKNLDVTEEDYLHVIKSKTAVLF 173
           S        + A+  +A  +    L    +           +V  E    +   KTA L 
Sbjct: 138 SSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALL 197

Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233
            A+  +  +I G  +   + L+ +   +G+ FQ+VDD+LD                   K
Sbjct: 198 EASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKS--------------SK 243

Query: 234 PTLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKA--FIIMREN 277
            T P ++  ++  +  +       +         V  L     +I  R+N
Sbjct: 244 LTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 293