RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3aqb
>3aqb_B Component B of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_B* Length = 325
Score = 252 bits (645), Expect = 7e-68
Identities = 85/319 (26%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
+ + +V + + I SD E I +++ SGGKR+RPM L + + + + D+
Sbjct: 6 YKAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDD 65
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
+ A ++E +H A+L+HDD +D+S +RRG + + + T++ G FLL++A +
Sbjct: 66 LIRTAVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIAT 125
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
+ + + S + GE Q++ N V+ YL I KTA+L A+ + +L
Sbjct: 126 INNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALS 185
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
+ + +K +G +G+++Q++DD+LDY + +GK +G D RNG T P++ A
Sbjct: 186 SQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIA 245
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLP 302
+++ + ++ + + ++ +I+ + + + E + YG KAK L L
Sbjct: 246 NLKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYGDKAKYHLSQLQ 305
Query: 303 DSSWKKSLMEVVDFCLQRL 321
DS+ K L E+ + L+R+
Sbjct: 306 DSNIKDYLEEIHEKMLKRV 324