RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3oyr
>3oyr_A Trans-isoprenyl diphosphate synthase; isoprenyl synthase, PSI, protein structure initiative; HET: IPE; 2.00A {Caulobacter crescentus} Length = 345
Score = 281 bits (720), Expect = 1e-76
Identities = 150/317 (47%), Positives = 209/317 (65%)
Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63
L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+
Sbjct: 27 LVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDH 86
Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123
LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++E
Sbjct: 87 FQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVE 146
Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183
T S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++
Sbjct: 147 TNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVS 206
Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243
AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA
Sbjct: 207 AGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIA 266
Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303
R RE FW+ I + + + ++A ++ + AL T A Y KAK +L P
Sbjct: 267 RSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPA 326
Query: 304 SSWKKSLMEVVDFCLQR 320
+ W+++L E+ DF + R
Sbjct: 327 NDWREALEELADFAVSR 343