RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3p8l
>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis} Length = 302
Score = 195 bits (497), Expect = 1e-50
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 18/293 (6%)
Query: 4 LEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
L + + + + V +++ I ++ E + + + Y I +GGKRLRP+L L T +
Sbjct: 10 LTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM 69
Query: 62 DNHVL-LACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
+ +A ++E IHT +L+HDD+ DD LRRGK V+G T++L GD LL+ AF
Sbjct: 70 ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF 129
Query: 119 CMVIETK---SQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVL 172
++ ++ S++ L L +G + + + +T E+ V + KT L
Sbjct: 130 QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGAL 189
Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232
AL ++A V L + + G+AFQ+ DD+LD ++GK +G D
Sbjct: 190 IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN 249
Query: 233 KPTLPVILAFQRGTKREKNF---WKSTINDGKISVENLKKA----FIIMRENR 278
K T P +L + + + K +V N + + + R
Sbjct: 250 KSTYPALLGIAGAKDALTHQLAEGSAVLEKIKANVPNFSEEHLANLLTQLQLR 302