HHsearch alignment for GI: 254780757 and conserved domain: COG0752
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1197.69 Aligned_cols=288 Identities=70% Similarity=1.209 Sum_probs=284.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 67777999999999999866958961167543332248578987448344016764155788765546677500114444
Q gi|254780757|r 8 KNDLSFQNIILTLTQYWAQQGCTILQPYDMEVGAGTFHPSTTLRALGPLSWKAAYVQPSRRPLDGRYAENPNRLQHYYQF 87 (307)
Q Consensus 8 ~~~~~fq~ii~~L~~fW~~~GC~i~qpyd~e~GAgT~hp~T~lr~lg~~pw~~aYvqPsrRP~DgRYGeNPNRlq~y~Qf 87 (307)
T Consensus 2 ~~~~~fQ~~IltLq~yW~~qGC~i~QpyD~evGAGT~hPaTfLralGpePw~aAYVqPSRRP~DGRYGenPNRlq~yyQf 81 (298)
T COG0752 2 NKKLTFQGLILTLQNYWAEQGCTILQPYDMEVGAGTFHPATFLRALGPEPWNAAYVQPSRRPTDGRYGENPNRLQHYYQF 81 (298)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHEEE
T ss_conf 85433999999999999876978614553445667677688997609976410010567799888778892665233157
Q ss_pred EEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCEEEHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 55757983358999999999819996217179883288870011012321768878741477789986682577514567
Q gi|254780757|r 88 QVIIKPNPLNLQNLYIESLKAVGIDPLIHDVRFVEDNWESPTLGAWGLGWECWCDGMEISQFTYFQQVCGIECSPISGEI 167 (307)
Q Consensus 88 QVilKPsp~niq~lYl~SL~~iGid~~~hDIrFveDnWEsPtLGAwGlGWEvwldGMEItQFTYFQQvGGi~c~pv~~Ei 167 (307)
T Consensus 82 QVilKPsP~NiQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWEVWldGMEvTQFTYFQQvGGiec~pV~~EI 161 (298)
T COG0752 82 QVIIKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGLECKPVSGEI 161 (298)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCCCCCCCEEEEECCEEEEEEEHHHHHCCEECCCEEEEE
T ss_conf 89955897118999998899809990123613411688788632023440677766265300064650782045311454
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 87899999998699821133206888788311062447469977763501798999999999999999998500665323
Q gi|254780757|r 168 TYGLERLAMYVQNVNSVYDIVFNAIEGQNVLYGDIFAQSEQEYSRYNFEYANPEILHNHFIDSEKECLDLLKKGIPNEHH 247 (307)
Q Consensus 168 TYGLERiaMylQ~vdnvyDl~wn~~~~~~vtYGdif~q~E~E~S~YNFE~Ad~~~L~~~F~~yE~Ea~rLle~~LP~~~~ 247 (307)
T Consensus 162 TYGlERlAmYiQ~vdnVydl~W~~~~~~~~tYgdvf~q~E~e~S~ynFE~ad~~~L~~~F~~~e~Ea~~ll~~~L~---- 237 (298)
T COG0752 162 TYGLERLAMYIQGVDNVYDLEWNDGPGGKVTYGDVFLQNEVEQSKYNFEYADVDMLFRHFDDYEKEAKRLLELGLV---- 237 (298)
T ss_pred EHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC----
T ss_conf 2229999999957661157650478887501013222327776440400178899999999999999999984898----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3553013828999999999878883875017889999999999999999999854516
Q gi|254780757|r 248 RHHLCVFPAYDQCIKASHIFNLLDARGVISTTERQRYILRIRSLAKACGEAFLMTPNG 305 (307)
Q Consensus 248 ~~~~lvlPAYD~~LKaSH~FNLLDARGaISVTERq~YI~RIR~Lak~~A~ayl~~re~ 305 (307)
T Consensus 238 ------lPAYd~vlKasH~FNlLDARgaISVtER~~YI~RiR~Lar~~a~~y~e~r~~ 289 (298)
T COG0752 238 ------LPAYDYVLKASHTFNLLDARGAISVTERQRYILRIRNLARAVAEAYLESREA 289 (298)
T ss_pred ------CCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------6339999976655533301565441688889999999999999999999985