HHsearch alignment of GI: 254780757 and MMDB domain: 1j5w_A_200-298
>1j5w_A (A:200-298) Glycyl-tRNA synthetase alpha chain; structural genomics, TM0216, JCSG, PSI, protein structure initiative; 1.95A {Thermotoga maritima}
Probab=100.00 E-value=3.2e-41 Score=319.27 Aligned_cols=96 Identities=44% Similarity=0.721 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 24474699777635017989999999999999999985006653233553013828999999999878883875017889
Q gi|254780757|r 202 IFAQSEQEYSRYNFEYANPEILHNHFIDSEKECLDLLKKGIPNEHHRHHLCVFPAYDQCIKASHIFNLLDARGVISTTER 281 (307)
Q Consensus 202 if~q~E~E~S~YNFE~Ad~~~L~~~F~~yE~Ea~rLle~~LP~~~~~~~~lvlPAYD~~LKaSH~FNLLDARGaISVTER 281 (307)
||+|+|+|||+||||+||+++|+++|++||+||++||+++|| +||||+||||||+|||||||||||||||
T Consensus 1 vf~q~E~e~S~ynFE~ad~~~L~~~F~~~E~Ea~rli~~~L~----------lPAYD~~lK~SH~FNLLDARGaISVtER 70 (99)
T 1j5w_A 1 VFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVEKNLY----------LPAYDYILKCSHTFNLLDARGAISVSQR 70 (99)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC----------CCHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 876538999886256449999999999999999999866999----------6669999999888888763578758999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CC
Q ss_conf 999999999999999999854516-89
Q gi|254780757|r 282 QRYILRIRSLAKACGEAFLMTPNG-GH 307 (307)
Q Consensus 282 q~YI~RIR~Lak~~A~ayl~~re~-g~ 307 (307)
|+||+|||+|||+||++|+++|+. ||
T Consensus 71 ~~yI~riR~Lak~~A~~y~~~re~lg~ 97 (99)
T 1j5w_A 71 QTYVKRIQAXARKAARVFLEVQANENS 97 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999998874699