HHsearch alignment of GI: 254780757 and MMDB domain: 1l0w_A_135-278_415-546

>1l0w_A (A:135-278,A:415-546) Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus}
Probab=95.69  E-value=0.22  Score=30.75  Aligned_cols=170  Identities=15%  Similarity=0.213  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCC-----CCCCC---------------CCCHHHHHH-HCCCCCCEEEEECCCCCCCCC
Q ss_conf             999999999998669589611675-----43332---------------248578987-448344016764155788765
Q gi|254780757|r   14 QNIILTLTQYWAQQGCTILQPYDM-----EVGAG---------------TFHPSTTLR-ALGPLSWKAAYVQPSRRPLDG   72 (307)
Q Consensus        14 q~ii~~L~~fW~~~GC~i~qpyd~-----e~GAg---------------T~hp~T~lr-~lg~~pw~~aYvqPsrRP~Dg   72 (307)
                      ..|+.++.+|..++|.+-+.+=-+     +-++-               +-.|...+. .+-+.+=++-|+.||.|..++
T Consensus        14 ~~I~~~ir~~~~~~Gf~Ei~TP~l~~~~~~~~~~~~~~~~~~~~~~~~L~~sp~~~~q~l~~~~~~k~f~ig~~FR~E~~   93 (276)
T 1l0w_A           14 HRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDL   93 (276)
T ss_dssp             HHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEEECTTSTTEEEECCSCSHHHHHHHHHTTCSEEEEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHHCCCEEEECHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99999999999877947973201035787425685246235888452356584798889987055635885343347999


Q ss_pred             CCCCCCCCCCEEEEEEEEECC-CCHHHHH----HHHHHHHH-CCCCCCCCCEEEE--------ECCCC------------
Q ss_conf             546677500114444557579-8335899----99999998-1999621717988--------32888------------
Q gi|254780757|r   73 RYAENPNRLQHYYQFQVIIKP-NPLNLQN----LYIESLKA-VGIDPLIHDVRFV--------EDNWE------------  126 (307)
Q Consensus        73 RYGeNPNRlq~y~QfQVilKP-sp~niq~----lYl~SL~~-iGid~~~hDIrFv--------eDnWE------------  126 (307)
                      +-    -|+-.++|+-+=+.- +..++.+    |.-..+++ +++|+...--|.-        ..+|-            
T Consensus        94 ~~----~h~~EFtqld~e~~~~~~~~~~~~~e~li~~i~~~~~~~~~~~~f~ri~~~~~~f~~~~~~p~~~~~e~e~~l~  169 (276)
T 1l0w_A           94 RA----DRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFREALGVELPLPFPRLSREGFRFLWVVDFPLLEWDEEEEAWT  169 (276)
T ss_dssp             CS----SCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCCCCSSCCEEECCSCCEEEEECCBSBCCCTTTSCCC
T ss_pred             CC----CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEECCCHHCCCC
T ss_conf             98----87852102245541255888876568999999999859876788665663463134564035213120212333


Q ss_pred             ------------------CCHHHHCCCCEEEEECCEEEH-----------HHHHHHHH-----------------CCCCC
Q ss_conf             ------------------700110123217688787414-----------77789986-----------------68257
Q gi|254780757|r  127 ------------------SPTLGAWGLGWECWCDGMEIS-----------QFTYFQQV-----------------CGIEC  160 (307)
Q Consensus       127 ------------------sPtLGAwGlGWEvwldGMEIt-----------QFTYFQQv-----------------GGi~c  160 (307)
                                        .+.-.++.--.+.-+||.||.           |-.-|.+.                 -...+
T Consensus       170 ~~~~vfi~~~p~~~~~~~~~~~~~~a~~~dl~~~g~Ei~~g~~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  249 (276)
T 1l0w_A          170 YMHHPFTSPHPEDLPLLEKDPGRVRALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGA  249 (276)
T ss_dssp             BSSCTTBCBCSTTTTHHHHCGGGCBBSEEEEEETTEEEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTC
T ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEECEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             45688678864114566439976732599962487898037173479999999999837990566767999999977699


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             7514567878999999986998211332
Q gi|254780757|r  161 SPISGEITYGLERLAMYVQNVNSVYDIV  188 (307)
Q Consensus       161 ~pv~~EiTYGLERiaMylQ~vdnvyDl~  188 (307)
                       |.++-..-|+||++|++.+++||-|++
T Consensus       250 -pph~G~GlG~dRlvm~l~~~~~IrdVi  276 (276)
T 1l0w_A          250 -PPHGGIAWGLDRLLALMTGSPSIREVI  276 (276)
T ss_dssp             -CCEEEEEEEHHHHHHHHHTCSSGGGGS
T ss_pred             -CCCCEEEEHHHHHHHHHHCCCCHHEEE
T ss_conf             -987657668999999980999576276