HHsearch results for GI: 254780757 and protein with PDBid: 3dsq_A
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=94.71 E-value=0.3 Score=28.70 Aligned_cols=167 Identities=18% Similarity=0.173 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHHCCCEEEECCCCC-------CCCCCCCH--------------------HHH-----HHHCCCCCCE
Q ss_conf 799999999999986695896116754-------33322485--------------------789-----8744834401
Q gi|254780757|r 12 SFQNIILTLTQYWAQQGCTILQPYDME-------VGAGTFHP--------------------STT-----LRALGPLSWK 59 (307)
Q Consensus 12 ~fq~ii~~L~~fW~~~GC~i~qpyd~e-------~GAgT~hp--------------------~T~-----lr~lg~~pw~ 59 (307)
.+..++..+.+|..+.|...+.+-.++ .|.+.-|| ..+ .....+.|-+
T Consensus 72 ~~~~l~~~ir~~~~~~Gf~eV~tP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lrp~~~p~~~~~~~~~~~~~~~p~r 151 (288)
T 3dsq_A 72 ALLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIR 151 (288)
T ss_dssp HHHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCEEEHHHHHCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 99999999999999887989987526522155345765443302204763742013435771788999986301479848
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEC--CCCH---HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH-C
Q ss_conf 676415578876554667750011444455757--9833---589999999998199962171798832888700110-1
Q gi|254780757|r 60 AAYVQPSRRPLDGRYAENPNRLQHYYQFQVIIK--PNPL---NLQNLYIESLKAVGIDPLIHDVRFVEDNWESPTLGA-W 133 (307)
Q Consensus 60 ~aYvqPsrRP~DgRYGeNPNRlq~y~QfQVilK--Psp~---niq~lYl~SL~~iGid~~~hDIrFveDnWEsPtLGA-w 133 (307)
+.++-+|.|-.+.. ..|+-.++|.-+.+- +... ++.++.-+.|+.+|+. |.+.+-+....+.... +
T Consensus 152 ~~~ig~vfR~E~~~----~~h~~eFtQ~e~~~~~~~~~~~~~~l~~l~~~~l~~~g~~----~~~~~~~~~~~~~~~~~~ 223 (288)
T 3dsq_A 152 IFEIGTCYRKESQG----AQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIR----EFELVTESSVVYGDTVDV 223 (288)
T ss_dssp EEEEEEEECSCCSS----SCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHHHHHTCC----CCEEEECCCCSSCCCEEE
T ss_pred EEEECEEECCCCCC----CCCCCCEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCC----CCEEEECCCCCCCEEEEC
T ss_conf 99966255568688----8867827773158986988999999999999999985997----787997047777307861
Q ss_pred CCCEEEEECCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 232176887874147778998668257751456787899999998699821133206
Q gi|254780757|r 134 GLGWECWCDGMEISQFTYFQQVCGIECSPISGEITYGLERLAMYVQNVNSVYDIVFN 190 (307)
Q Consensus 134 GlGWEvwldGMEItQFTYFQQvGGi~c~pv~~EiTYGLERiaMylQ~vdnvyDl~wn 190 (307)
+-||.-.-.||=-.. -....||++ +|+.+ .-+|+||+||..-+++++-++.=+
T Consensus 224 ~~~~~El~~~~~~~~--~~~~~~~~~-~~~~~-~g~gierlam~~~g~~dir~~~r~ 276 (288)
T 3dsq_A 224 MKGDLELASGAMGPH--FLDEKWEIF-DPWVG-LGFGLERLLMIREGTQHVQSMARS 276 (288)
T ss_dssp EETTEEEEEEEEESC--TTTTTTTCC-SCEEE-EEEEHHHHHHHHHTCSCGGGGSSC
T ss_pred CCCEEEEECCCCCHH--HHHHCCCCC-CCCEE-EECCHHHHHHHHCCCCCHHHHHHC
T ss_conf 896688606875899--998658999-98788-735799999987099857776312