>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2; InterPro: IPR004797 This is the DNA internalisation-related competence protein ComEC/Rec2 family. Apparent orthologs are found in 5 species so far (Haemophilus influenzae, Escherichia coli, Bacillus subtilis, Neisseria gonorrhoeae, Streptococcus pneumoniae), of which all but E. coli are model systems for the study of competence for natural transformation. This protein is a predicted multiple membrane-spanning protein likely to be involved in DNA internalisation.; GO: 0030420 establishment of competence for transformation, 0016021 integral to membrane.

Probab=96.87 E-value=0.0078 Score=36.26 Aligned_cols=172 Identities=14% Similarity=0.223 Sum_probs=90.3 Q ss_pred EEEEEECCCCCCCEEEEEECCCCEE-EEECCCCC------------------HHHHHHHHHHCCCC-EEEEEECCCCCCC Q ss_conf 5999970876571699998899849-99838999------------------99999999974997-5299986988521 Q gi|254780758|r 5 SFHIVQVTPFKQNCTFLFDEESLEA-VVVDPGGD------------------LDIIKDVIQSRNFH-VKQIWITHGHVDH 64 (216) Q Consensus 5 ~~~~i~v~~~~~N~~li~~~~~~~~-ilID~G~~------------------~~~i~~~l~~~~~~-i~~Ii~TH~H~DH 64 (216) T Consensus 482 ~~~~~d~g--~g~~~~~~-~~~~~~~~l~d~gg~~~~~~~~w~~~~~p~~~~~~~~~p~l~~~~~~~~~~~~l~~~~~d~ 558 (731) T TIGR00361 482 EVDLLDVG--QGLALLIG-KNGQKGRILYDTGGTLSYSSLPWREGQHPFSLGELLLLPWLTWEGLKQLEGLILSHDDLDH 558 (731) T ss_pred CEEEEECC--CCCEEEEE-CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC T ss_conf 13454226--76213344-4786531686347621125434666667521002455434543021012344200232111 Q ss_pred CCCCHHHHHHHCCCEEECC------HHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC--C-- Q ss_conf 0110567886079554058------43898840123444432002346666741896478399762012331012--2-- Q gi|254780758|r 65 VGGAAQLKEDLSLTIIGPH------KDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC--P-- 134 (216) Q Consensus 65 ~gg~~~l~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t--P-- 134 (216) T Consensus 559 ~g~~~~~l~~~~~~~~~~p~~~~~~p~d~~~~~~~~---------~~---~~~~~~~~~g~~~~~~~l~~~~~~p~~~~~ 626 (731) T TIGR00361 559 AGGADTLLKHWPVLWLVTPKGFNSEPKDEKVLQAAR---------LG---GEYHEPCKRGDDWQWQGLRFHVLSPLAPDP 626 (731) T ss_pred CCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHH---------HC---CCHHHHHHCCCCEEECCCEEEEECCCCCCC T ss_conf 240567776420010321544456640356776654---------04---401112213541011141135415545666 Q ss_pred CC-CCCCCCCCCCCC--CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH Q ss_conf 24-721000001234--321111000001356634679899999999999985199978998488798888999 Q gi|254780758|r 135 GH-SPGHVIYVNFEN--NFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRE 205 (216) Q Consensus 135 GH-t~g~~~~~~~~~--~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e 205 (216) T Consensus 627 ~~~~~~~~~~~~~~g~~~~~l~gd~~~~-----------~~~~~~~---~~~~~~~~~~l~~~~~g~~~~~~~~ 686 (731) T TIGR00361 627 DSGNNHSCVLWVDDGGNSWLLTGDLEAP-----------GEQKELA---RTWPKIDADVLQVGHHGSKTSTGEP 686 (731) T ss_pred CCCCCCEEEEEEECCCCEEEEECCCCCC-----------HHHHHHH---HHHCCHHHHHEECCCCCCCCCCHHH T ss_conf 6677631689971687137872253451-----------2578898---7630000121013666766541257

HHsearch alignment for GI: 254780758 and conserved domain: TIGR00361