HHsearch results for GI: 254780758 and protein with PDBid: 2i7t_A
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.72 E-value=3.5e-18 Score=124.19 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=96.2
Q ss_pred CEEEEEECCCCC---CCEEEEEECCCCEEEEECCCCCHH----HHHHHHHHCC-CCEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 359999708765---716999988998499983899999----9999999749-97529998698852101105678860
Q gi|254780758|r 4 LSFHIVQVTPFK---QNCTFLFDEESLEAVVVDPGGDLD----IIKDVIQSRN-FHVKQIWITHGHVDHVGGAAQLKEDL 75 (216)
Q Consensus 4 ~~~~~i~v~~~~---~N~~li~~~~~~~~ilID~G~~~~----~i~~~l~~~~-~~i~~Ii~TH~H~DH~gg~~~l~~~~ 75 (216)
-++++.++|..+ -|||++..+ +..+|||||.... .....+.... .+|++|++||+|.||+||+++|.++.
T Consensus 10 ~~~~i~~LGG~~eiG~sc~lv~~~--~~~illDcG~~~~~~~~~~~p~~~~~~~~~idai~lTH~H~DH~g~Lp~l~~~~ 87 (459)
T 2i7t_A 10 DQLLIRPLGAGQEVGRSCIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT 87 (459)
T ss_dssp EEEEEEEEESSSSSSSCEEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS
T ss_pred CEEEEEECCCCCCCCCCEEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHC
T ss_conf 849999826898645689999989--929999588998865200267766678222999998978588769279999864
Q ss_pred --CCCEEECCHHHHHHHCCHHHHHHHHHCCCCC---------CCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf --7955405843898840123444432002346---------66674189647839976201233101222472100000
Q gi|254780758|r 76 --SLTIIGPHKDDAAMMGKVDEQARLLSIRMNA---------RNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYV 144 (216)
Q Consensus 76 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~ 144 (216)
+.++|+++....................... ........+..++....++..++++++ ||++|++++.
T Consensus 88 ~~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~a-gH~~g~~~~~ 166 (459)
T 2i7t_A 88 SFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHA-GHVLGAAMFM 166 (459)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEEC-CSSTTCEEEE
T ss_pred CCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEECCCCEEEECCEEEEEEEC-CCCCCCEEEE
T ss_conf 899988831527999998889877541034323567799999776245870799568608759999844-7767857999
Q ss_pred C--CCCCCCCCCCH
Q ss_conf 1--23432111100
Q gi|254780758|r 145 N--FENNFAHLGDT 156 (216)
Q Consensus 145 ~--~~~~~lftGD~ 156 (216)
+ ++.++++|||.
T Consensus 167 i~~~~~~i~ytGD~ 180 (459)
T 2i7t_A 167 IEIAGVKLLYTGDF 180 (459)
T ss_dssp EEETTEEEEECCSC
T ss_pred EEECCEEEEECCCC
T ss_conf 99899988855886