HHsearch results for GI: 254780758 and protein with PDBid: 2q9u_A

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.96  E-value=1.2e-28  Score=185.05  Aligned_cols=170  Identities=16%  Similarity=0.115  Sum_probs=122.1

Q ss_pred             CCCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC-C-CCEEEEEECCCCCCCCCCCHHHHHHHC-CCEEECCHHHHHH
Q ss_conf             57169999889984999838999--99999999974-9-975299986988521011056788607-9554058438988
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR-N-FHVKQIWITHGHVDHVGGAAQLKEDLS-LTIIGPHKDDAAM   89 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~-~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~-~~i~~~~~~~~~~   89 (216)
                      .-|||||.++   +.+|||||..  .+.+++.+++. + .+|++|++||.|+||+||++.|.++++ ++++++..... .
T Consensus        40 s~NsYLI~~e---~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~~~~p~a~i~~~~~~~~-~  115 (414)
T 2q9u_A           40 SYNSYFIDDE---CPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQE-H  115 (414)
T ss_dssp             EECCEEECSS---SCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHH-H
T ss_pred             EEEEEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHH-H
T ss_conf             7999999669---88999099801699999999975698779989969096647602999998788987997589998-8


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCCCC
Q ss_conf             401234444320023466667418964783997620123310122-247210000012343211110000013-566346
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSS-IGRTDI  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~-~G~~d~  167 (216)
                      +...      +     .......+.+++++++.+|+.+++++++| |||+|++++|.+++++||+||++.... .+....
T Consensus       116 ~~~~------~-----~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~~~~~~~~~~~~~  184 (414)
T 2q9u_A          116 LKIL------Y-----GMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWA  184 (414)
T ss_dssp             HHHH------H-----CCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBG
T ss_pred             HHHH------C-----CCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCC
T ss_conf             8874------3-----8986525871589889756558999703689868978999989896894574566788876765


Q ss_pred             CC-------------------CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             79-------------------89999999999998519997899848879888
Q gi|254780758|r  168 LH-------------------GDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       168 ~~-------------------~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      ..                   ....++.++| ++|..|+.++ |+|||||...
T Consensus       185 ~~~~~~~~~~~~~~y~~~~~~p~~~~~~~~L-ekl~~Ldi~~-I~PgHGpi~r  235 (414)
T 2q9u_A          185 DECDVSHVMHLFKEYTANILGLFSAQMRKAL-EVASTVEIKY-ILSAHGVSWR  235 (414)
T ss_dssp             GGSCHHHHHHHHHHHHHHHTTTCHHHHHHHH-HHHHTSCCSE-EEESSSCBEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHCCCCCE-EEECCCCEEC
T ss_conf             3234266799999998773022399999999-9975789789-9808967244