HHsearch results for GI: 254780758 and protein with PDBid: 2vw8_A
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=100.00 E-value=1.5e-34 Score=219.19 Aligned_cols=191 Identities=23% Similarity=0.272 Sum_probs=141.1
Q ss_pred EEECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHC-CCEEE
Q ss_conf 99708765716999988998499983899--99999999997499---75299986988521011056788607-95540
Q gi|254780758|r 8 IVQVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLS-LTIIG 81 (216)
Q Consensus 8 ~i~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~-~~i~~ 81 (216)
+..+|..+.|||++.++++ .++|||||. +.+.+++.+++.+. +|++|++||.|+||+||+..|.++++ +++++
T Consensus 16 ~~~~g~~~~~~yll~~g~~-~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~ 94 (303)
T 2vw8_A 16 LCLLGDVQVPVFLLRLGEA-SWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLA 94 (303)
T ss_dssp EEEESCTTSCEEEEEEETT-EEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEE
T ss_pred EEECCCCCCEEEEEEECCC-CEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHHCCCCCEEEE
T ss_conf 3313767527999997998-689995989852999999999828982427989959099865086345542167866994
Q ss_pred CCHHHHHHHCCHHHHHH-------HH-----HCCCCCCCCCCEEEECCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 58438988401234444-------32-----0023466667418964783997620-12331012224721000001234
Q gi|254780758|r 82 PHKDDAAMMGKVDEQAR-------LL-----SIRMNARNASSDRWLQDGDTLLLGT-HIFKVFHCPGHSPGHVIYVNFEN 148 (216)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~l~~gd~i~lg~-~~~~vi~tPGHt~g~~~~~~~~~ 148 (216)
+..+...+ ........ .. ..........++..+.+|+++.+|+ ..++++++||||+||+++|+++.
T Consensus 95 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~~PGHt~g~~~~~~~~~ 173 (303)
T 2vw8_A 95 SERTCQAW-KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRR 173 (303)
T ss_dssp EHHHHHHT-TCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEETTT
T ss_pred CHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEECCC
T ss_conf 48899987-36301345777776543221024555556667856947999898578226732667996998756371799
Q ss_pred CCCCCCCHHHHC--CCCCCC-CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 321111000001--356634-67989999999999998519997899848879888
Q gi|254780758|r 149 NFAHLGDTLFRS--SIGRTD-ILHGDYQQLINSINNKILPLGDEISFVCGHGPNST 201 (216)
Q Consensus 149 ~~lftGD~lf~~--~~G~~d-~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt 201 (216)
+++|+||+++.. ..+.+. .+.+|..++++|+ +++..++++..|+|||||..+
T Consensus 174 ~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl-~rl~~l~~~~~i~PgHG~~~~ 228 (303)
T 2vw8_A 174 RRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESL-ERLQRLPTLLQLIPGHGGLLR 228 (303)
T ss_dssp TEEEEETTTCEECTTTCSEECCCSSCHHHHHHHH-HHHHTSSCCSEEEESSSCEEE
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCCEEECCCCCCCC
T ss_conf 9999828347778897766889997799999999-999768999899999997338