HHsearch results for GI: 254780758 and protein with PDBid: 2vw8_A

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=100.00  E-value=1.5e-34  Score=219.19  Aligned_cols=191  Identities=23%  Similarity=0.272  Sum_probs=141.1

Q ss_pred             EEECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHC-CCEEE
Q ss_conf             99708765716999988998499983899--99999999997499---75299986988521011056788607-95540
Q gi|254780758|r    8 IVQVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLS-LTIIG   81 (216)
Q Consensus         8 ~i~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~-~~i~~   81 (216)
                      +..+|..+.|||++.++++ .++|||||.  +.+.+++.+++.+.   +|++|++||.|+||+||+..|.++++ +++++
T Consensus        16 ~~~~g~~~~~~yll~~g~~-~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~   94 (303)
T 2vw8_A           16 LCLLGDVQVPVFLLRLGEA-SWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLA   94 (303)
T ss_dssp             EEEESCTTSCEEEEEEETT-EEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEE
T ss_pred             EEECCCCCCEEEEEEECCC-CEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHHCCCCCEEEE
T ss_conf             3313767527999997998-689995989852999999999828982427989959099865086345542167866994


Q ss_pred             CCHHHHHHHCCHHHHHH-------HH-----HCCCCCCCCCCEEEECCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             58438988401234444-------32-----0023466667418964783997620-12331012224721000001234
Q gi|254780758|r   82 PHKDDAAMMGKVDEQAR-------LL-----SIRMNARNASSDRWLQDGDTLLLGT-HIFKVFHCPGHSPGHVIYVNFEN  148 (216)
Q Consensus        82 ~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~l~~gd~i~lg~-~~~~vi~tPGHt~g~~~~~~~~~  148 (216)
                      +..+...+ ........       ..     ..........++..+.+|+++.+|+ ..++++++||||+||+++|+++.
T Consensus        95 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~~PGHt~g~~~~~~~~~  173 (303)
T 2vw8_A           95 SERTCQAW-KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRR  173 (303)
T ss_dssp             EHHHHHHT-TCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEETTT
T ss_pred             CHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEECCC
T ss_conf             48899987-36301345777776543221024555556667856947999898578226732667996998756371799


Q ss_pred             CCCCCCCHHHHC--CCCCCC-CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             321111000001--356634-67989999999999998519997899848879888
Q gi|254780758|r  149 NFAHLGDTLFRS--SIGRTD-ILHGDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       149 ~~lftGD~lf~~--~~G~~d-~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      +++|+||+++..  ..+.+. .+.+|..++++|+ +++..++++..|+|||||..+
T Consensus       174 ~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl-~rl~~l~~~~~i~PgHG~~~~  228 (303)
T 2vw8_A          174 RRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESL-ERLQRLPTLLQLIPGHGGLLR  228 (303)
T ss_dssp             TEEEEETTTCEECTTTCSEECCCSSCHHHHHHHH-HHHHTSSCCSEEEESSSCEEE
T ss_pred             CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCCEEECCCCCCCC
T ss_conf             9999828347778897766889997799999999-999768999899999997338