Query         gi|254780758|ref|YP_003065171.1| hypothetical protein CLIBASIA_03225 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 216
No_of_seqs    176 out of 7460
Neff          8.5 
Searched_HMMs 23785
Date          Tue May 31 15:20:50 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780758.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2xf4_A Hydroxyacylglutathione  100.0       0       0  353.4  17.6  210    4-214     1-210 (210)
  2 1xm8_A Glyoxalase II; structur 100.0       0       0  328.1  17.1  187    4-215     1-224 (254)
  3 2qed_A Hydroxyacylglutathione  100.0       0       0  323.4  17.0  186    1-215     5-227 (258)
  4 2gcu_A Putative hydroxyacylglu 100.0       0       0  320.4  18.0  192    3-215     2-206 (245)
  5 1qh5_A Glyoxalase II, protein  100.0       0       0  322.1  15.3  186    4-215     1-228 (260)
  6 2p18_A Glyoxalase II; metallop 100.0       0       0  312.6  16.2  197    1-215    26-286 (311)
  7 2zwr_A Metallo-beta-lactamase  100.0       0       0  304.4  18.8  202    4-214     1-202 (207)
  8 2vw8_A PA1000, PQSE; quinolone 100.0 1.5E-34 6.4E-39  219.2  17.7  191    8-201    16-228 (303)
  9 2gmn_A Metallo-beta-lactamase; 100.0 6.9E-34 2.9E-38  215.4  17.8  200    8-213    27-245 (274)
 10 2zo4_A Metallo-beta-lactamase  100.0 8.7E-34 3.7E-38  214.8  16.5  183   15-202    21-239 (317)
 11 1a7t_A Metallo-beta-lactamase; 100.0 9.5E-33   4E-37  208.8  12.9  172   14-203    35-213 (232)
 12 1m2x_A Class B carbapenemase B 100.0 4.9E-32 2.1E-36  204.6  15.9  171   14-202    25-202 (223)
 13 3l6n_A Metallo-beta-lactamase; 100.0 2.9E-32 1.2E-36  206.0  14.4  176   14-207    29-211 (219)
 14 3adr_A Putative uncharacterize 100.0 1.1E-32 4.8E-37  208.3  12.2  192    1-201     1-212 (261)
 15 2yz3_A Metallo-beta-lactamase; 100.0 1.1E-31 4.4E-36  202.7  12.5  184   14-213    67-257 (266)
 16 1k07_A FEZ-1 beta-lactamase; m 100.0 4.1E-31 1.7E-35  199.2  15.2  201    8-212    17-237 (263)
 17 2whg_A VIM-4 metallo-beta-lact 100.0 1.3E-31 5.6E-36  202.1  11.8  185   14-213    36-226 (230)
 18 1mqo_A Beta-lactamase II; alph 100.0 9.1E-31 3.8E-35  197.3  14.2  182   15-213    40-227 (227)
 19 1jjt_A IMP-1 metallo beta-lact 100.0 1.4E-30 6.1E-35  196.1  14.7  167   15-202    32-203 (228)
 20 3iog_A Beta-lactamase; hydrola 100.0 1.4E-30 5.9E-35  196.2  14.0  190    3-202     2-210 (227)
 21 1sml_A Protein (penicillinase) 100.0 3.9E-30 1.6E-34  193.6  14.2  187   10-201    32-230 (269)
 22 2fhx_A SPM-1; metallo-beta-lac 100.0   3E-29 1.3E-33  188.4  15.1  187   12-204    26-229 (246)
 23 2cfu_A SDSA1; SDS-hydrolase, l 100.0 1.8E-28 7.5E-33  183.9  14.8  188   11-201   117-349 (658)
 24 2p97_A Hypothetical protein; p 100.0 5.2E-29 2.2E-33  187.0  12.1  167   12-206    20-192 (201)
 25 2q9u_A A-type flavoprotein; fl 100.0 1.2E-28 4.8E-33  185.1  12.8  170   15-201    40-235 (414)
 26 2ohh_A Type A flavoprotein FPR 100.0 3.2E-28 1.3E-32  182.5  14.3  172   15-201    34-238 (404)
 27 1ycg_A Nitric oxide reductase; 100.0   4E-28 1.7E-32  181.9  12.6  172   15-201    35-232 (398)
 28 1e5d_A Rubredoxin\:oxygen oxid 100.0   7E-28   3E-32  180.5  11.5  176   13-204    30-234 (402)
 29 1vme_A Flavoprotein; TM0755, s  99.9 6.5E-27 2.7E-31  174.9  13.1  165   16-201    52-245 (410)
 30 3esh_A Protein similar to meta  99.9 5.4E-28 2.3E-32  181.2   7.5  180   15-200    47-255 (280)
 31 3hnn_A Putative diflavin flavo  99.9 1.5E-26 6.3E-31  172.8  13.5  169   16-200    43-235 (262)
 32 3dha_A N-acyl homoserine lacto  99.9 5.1E-27 2.1E-31  175.5   8.5  183    1-198     5-241 (254)
 33 2r2d_A AGR_PTI_140P, Zn-depend  99.9 9.2E-26 3.9E-30  168.2   7.3  191   16-212    43-275 (276)
 34 1ztc_A Hypothetical protein TM  99.9   2E-25 8.6E-30  166.2   7.6  187    2-201    11-216 (221)
 35 1p9e_A Methyl parathion hydrol  99.9   6E-26 2.5E-30  169.3   4.0  184   15-204    96-310 (331)
 36 3bk2_A RNAse J, metal dependen  99.8   3E-19 1.3E-23  130.3   9.1  146    5-159    16-183 (562)
 37 3af5_A Putative uncharacterize  99.7 5.6E-18 2.3E-22  123.0   8.2  149    5-157   188-369 (651)
 38 2bib_A CBPE, teichoic acid pho  99.7 4.6E-17   2E-21  117.6  11.7  191    2-210     4-246 (547)
 39 2i7t_A Cleavage and polyadenyl  99.7 3.5E-18 1.5E-22  124.2   5.2  150    4-156    10-180 (459)
 40 2xr1_A Cleavage and polyadenyl  99.7 4.4E-18 1.9E-22  123.6   2.7  151    5-158   183-358 (640)
 41 2az4_A Hypothetical protein EF  99.7 2.2E-16 9.2E-21  113.7   7.7  139   14-158    18-192 (429)
 42 2i7x_A Protein CFT2; polyadeny  99.6 8.4E-16 3.5E-20  110.3   9.8  142   12-156    11-180 (717)
 43 2p4z_A Metal-dependent hydrola  99.6 1.6E-14 6.8E-19  102.9  10.5   63   16-81     33-99  (284)
 44 1zkp_A Hypothetical protein BA  99.5 5.6E-14 2.4E-18   99.7   8.7  138    3-158    24-182 (268)
 45 3g1p_A Protein PHNP; C-P lyase  99.4 4.7E-13   2E-17   94.4   6.2  122   17-157    40-166 (258)
 46 3jxp_A Coenzyme PQQ synthesis   99.2 5.8E-11 2.4E-15   82.2   8.1   71   16-89     40-120 (321)
 47 2cbn_A Ribonuclease Z; phospho  99.1 2.4E-10 9.9E-15   78.7   9.4   84    3-89      1-102 (306)
 48 3h3e_A Uncharacterized protein  99.1 1.9E-10 7.9E-15   79.3   7.5   66    3-74     12-84  (267)
 49 1y44_A Ribonuclease Z; zinc-de  99.0 1.7E-09 7.2E-14   73.7   8.8   83    4-89      1-100 (320)
 50 3kl7_A Putative metal-dependen  98.9 1.3E-09 5.6E-14   74.3   4.6  159   11-202    32-215 (235)
 51 3md7_A Beta-lactamase-like; ss  98.7 6.2E-08 2.6E-12   64.6   8.0   57   16-74     62-122 (293)
 52 3bv6_A Metal-dependent hydrola  98.7 1.5E-08 6.2E-13   68.2   4.6  169   12-199    65-309 (379)
 53 1vjn_A Zn-dependent hydrolase   98.6 1.9E-07   8E-12   61.8   7.6  136   11-196    15-173 (220)
 54 2wyl_A L-ascorbate-6-phosphate  98.5 2.6E-07 1.1E-11   61.1   7.5  134   12-159    41-230 (360)
 55 2e7y_A TRNAse Z; tRNA maturati  98.4 7.4E-08 3.1E-12   64.2   2.8   51   17-73     12-62  (280)
 56 2ji4_A Phosphoribosyl pyrophos  80.8    0.92 3.9E-05   23.0   2.8   34  174-208   287-321 (379)
 57 3dah_A Ribose-phosphate pyroph  71.8     2.7 0.00011   20.3   3.2   34  175-209   232-266 (319)
 58 1dku_A Protein (phosphoribosyl  68.9     3.3 0.00014   19.8   3.1   34  175-209   233-267 (317)
 59 2h06_A Ribose-phosphate pyroph  64.1     3.1 0.00013   19.9   2.2   28  182-209   235-263 (326)
 60 2vyc_A Biodegradative arginine  55.6     3.5 0.00015   19.6   1.2   12   52-63    313-324 (755)
 61 1u9y_A RPPK;, ribose-phosphate  54.5     8.3 0.00035   17.4   3.0   36  174-210   220-256 (284)
 62 3olh_A MST, 3-mercaptopyruvate  43.8      15 0.00063   15.9   4.3   55  134-202   215-269 (302)
 63 1ii7_A MRE11 nuclease; RAD50,   37.8      19 0.00079   15.4   3.2   23   43-68     69-91  (333)
 64 1rhs_A Sulfur-substituted rhod  34.4      21 0.00089   15.1   3.4   55  134-202   201-255 (296)
 65 1w55_A ISPD/ISPF bifunctional   25.4      21 0.00087   15.1   1.2   71  114-186   220-296 (371)
 66 2iss_D Glutamine amidotransfer  24.8      31  0.0013   14.1   2.8   23   30-52     24-46  (208)
 67 2kb3_A Oxoglutarate dehydrogen  24.7      26  0.0011   14.5   1.6   23  113-135   120-142 (143)
 68 2j13_A Polysaccharide deacetyl  24.4      32  0.0013   14.0   3.3   41   17-57     45-89  (247)
 69 3aay_A Putative thiosulfate su  23.7      33  0.0014   13.9   4.0   21   37-57     61-82  (277)
 70 3gqs_A Adenylate cyclase-like   23.6      25   0.001   14.6   1.3   27  109-135    78-104 (106)
 71 1l1q_A Adenine phosphoribosylt  23.1      34  0.0014   13.9   2.3   12  146-157   116-127 (186)
 72 1g2q_A Adenine phosphoribosylt  22.3      35  0.0015   13.8   3.9   13  145-157   120-132 (187)
 73 2if1_A EIF1, SUI1; translation  21.8      36  0.0015   13.7   3.3   13   59-71      5-17  (126)
 74 1vch_A Phosphoribosyltransfera  21.0      37  0.0016   13.6   3.7   12  146-157   119-130 (175)
 75 2wns_A Orotate phosphoribosylt  20.8      38  0.0016   13.6   3.6   39   41-84     52-93  (205)
 76 2h5e_A Peptide chain release f  20.8      38  0.0016   13.6   3.7   34   29-63    110-147 (529)
 77 2p1z_A Phosphoribosyltransfera  20.4      39  0.0016   13.5   4.9   13  145-157   112-124 (180)
 78 1o57_A PUR operon repressor; p  20.4      39  0.0016   13.5   2.9   12  146-157   195-206 (291)
 79 1qb7_A APRT, adenine phosphori  20.1      39  0.0016   13.5   3.9   35   45-84     65-102 (236)

No 1  
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=100.00  E-value=0  Score=353.41  Aligned_cols=210  Identities=41%  Similarity=0.843  Sum_probs=192.1

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECC
Q ss_conf             35999970876571699998899849998389999999999997499752999869885210110567886079554058
Q gi|254780758|r    4 LSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPH   83 (216)
Q Consensus         4 ~~~~~i~v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~   83 (216)
                      |++++||+++|++|||+|.++++++++|||||.+.+.+++.+++.+++|++|++||.|+||+||+..|++++++++++..
T Consensus         1 m~~~~i~~~~~~~N~yli~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~~i~~~~   80 (210)
T 2xf4_A            1 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPE   80 (210)
T ss_dssp             CEEEEEEETTTTEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCC
T ss_pred             CCEEEEECCCHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEC
T ss_conf             94399987844668999998999989999798089999999997799348999787998553518998775098478501


Q ss_pred             HHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf             43898840123444432002346666741896478399762012331012224721000001234321111000001356
Q gi|254780758|r   84 KDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIG  163 (216)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G  163 (216)
                      ..+..+..........+.. .......++..+++++.+.+|+.++++++||||||||++++.++.+++|+||.+|.+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dg~~~~~g~~~~~~i~tPGHT~g~~~~~~~~~~~l~~GD~~~~~~~~  159 (210)
T 2xf4_A           81 KEDEFWLQGLPAQSRMFGL-DECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVG  159 (210)
T ss_dssp             GGGHHHHHTHHHHHHHTTC-CCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEEC
T ss_pred             CHHHHHHCCCHHHHHHCCC-CCCCCCCCCEEECCCCCCEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCC
T ss_conf             0456652042123211033-345567785893168742369989999992699998689997788842148886379704


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCHHHHC
Q ss_conf             634679899999999999985199978998488798888999882814514
Q gi|254780758|r  164 RTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRERRLNPFLKS  214 (216)
Q Consensus       164 ~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e~~~n~~~~~  214 (216)
                      +++++.+|..++++||++++..++++++|+|||||+||+++||+.|||||+
T Consensus       160 ~~~~~~~d~~~~~~sl~~~l~~l~~~~~v~PGHG~~st~~~e~~~N~~~~~  210 (210)
T 2xf4_A          160 RSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQD  210 (210)
T ss_dssp             CCCSTTCCHHHHHHHHHHHTGGGCTTCEEEESSSCCEEHHHHHHHCTTC-C
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCHHHCC
T ss_conf             766788999999999999997089983998999986549999875845249


No 2  
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=100.00  E-value=0  Score=328.06  Aligned_cols=187  Identities=33%  Similarity=0.540  Sum_probs=168.4

Q ss_pred             CEEEEEECCCCCCC-EEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf             35999970876571-69999889984999838999999999999749975299986988521011056788607955405
Q gi|254780758|r    4 LSFHIVQVTPFKQN-CTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGP   82 (216)
Q Consensus         4 ~~~~~i~v~~~~~N-~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~   82 (216)
                      |++++||+  |++| +|+|.++++++|++|||| +.+.+++.+++.++++++|++||.|+||++|+.+|++++++++++.
T Consensus         1 M~i~~ip~--l~dNy~Yli~d~~t~~~~vIDp~-~~~~vl~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~~~~~~i~~~   77 (254)
T 1xm8_A            1 MQIELVPC--LKDNYAYILHDEDTGTVGVVDPS-EAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGS   77 (254)
T ss_dssp             CEEEEEEE--TTTEEEEEEECTTTCCEEEECCS-SHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEE
T ss_pred             CEEEEEEE--ECCEEEEEEEECCCCEEEEECCC-CCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEE
T ss_conf             97899743--42578999998999989999897-8299999999779916899944788655266899988639838973


Q ss_pred             CHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf             84389884012344443200234666674189647839976201233101222472100000123432111100000135
Q gi|254780758|r   83 HKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSI  162 (216)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~  162 (216)
                      ..+..                   .....++.+++|+.+.+|+.+++|++|||||+||+|||++++++|||||+||.+||
T Consensus        78 ~~~~~-------------------~~~~~~~~~~dgd~i~~g~~~~~vi~tPGHT~ghv~~~~~~~~~lftGDtlf~~g~  138 (254)
T 1xm8_A           78 AMDKD-------------------RIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSC  138 (254)
T ss_dssp             GGGGG-------------------GSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEE
T ss_pred             CCCCC-------------------CCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCEEEEECCCCEEEECCEEEECCC
T ss_conf             33224-------------------58789878348973678887899997279887756899757537885688874588


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC------------------------------------CCCHHHHH
Q ss_conf             663467989999999999998519997899848879------------------------------------88889998
Q gi|254780758|r  163 GRTDILHGDYQQLINSINNKILPLGDEISFVCGHGP------------------------------------NSTIGRER  206 (216)
Q Consensus       163 G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~------------------------------------~tt~~~e~  206 (216)
                      ||+  ++|++.+|++|| +||++||++|+|||||++                                    +||++.||
T Consensus       139 Gr~--~~g~~~~~~~Sl-~kl~~Lp~~t~v~pgH~y~~~n~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~tvpstl~~E~  215 (254)
T 1xm8_A          139 GKL--FEGTPKQMLASL-QKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEK  215 (254)
T ss_dssp             CCC--SSSCHHHHHHHH-HHHHTSCTTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHH
T ss_pred             CCC--CCCCHHHHHHHH-HHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf             888--999999999999-99970896565722565543330125440787688999999999998779995775389998


Q ss_pred             HHCHHHHCC
Q ss_conf             828145148
Q gi|254780758|r  207 RLNPFLKSN  215 (216)
Q Consensus       207 ~~n~~~~~~  215 (216)
                      +.|||||.+
T Consensus       216 ~~Npflr~~  224 (254)
T 1xm8_A          216 ACNPFLRSS  224 (254)
T ss_dssp             HHCGGGCTT
T ss_pred             HHCCCCCCC
T ss_conf             749546789


No 3  
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- lactamase superfamily; 1.45A {Salmonella typhimurium LT2} SCOP: d.157.1.2
Probab=100.00  E-value=0  Score=323.41  Aligned_cols=186  Identities=28%  Similarity=0.534  Sum_probs=161.9

Q ss_pred             CCCCEEEEEECCCCCCCE-EEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCE
Q ss_conf             977359999708765716-9999889984999838999999999999749975299986988521011056788607955
Q gi|254780758|r    1 MSKLSFHIVQVTPFKQNC-TFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTI   79 (216)
Q Consensus         1 m~~~~~~~i~v~~~~~N~-~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i   79 (216)
                      |++|++++||+  |+.|+ |+|.+ ++++|++|||| +.+.+++.+++.++++++|++||.|+||++|+..+++++++++
T Consensus         5 ~~~~~i~~iP~--~~DNy~Yli~~-~~~~avvIDPg-~~~~il~~l~~~~~~l~~Il~TH~H~DHi~g~~~l~~~~~~~~   80 (258)
T 2qed_A            5 IGSMNLNSIPA--FQDNYIWVLTN-DEGRCVIVDPG-EAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMT   80 (258)
T ss_dssp             --CCEEEEEEE--TTTEEEEEEEC-TTSEEEEECCS-CHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCE
T ss_pred             CCCCEEEEEEE--ECCEEEEEEEE-CCCEEEEECCC-CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEE
T ss_conf             65777999600--43758999993-89709998698-7599999999769905799937999876553355444320214


Q ss_pred             EECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             40584389884012344443200234666674189647839976201233101222472100000123432111100000
Q gi|254780758|r   80 IGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFR  159 (216)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~  159 (216)
                      ++.....                    .....+..+.+||++.+|+.++++++||||||||+||+.+  +.+||||+||.
T Consensus        81 ~~~~~~~--------------------~~~~~~~~l~dgd~i~iG~~~~~vihTPGHT~g~v~~~~~--~~lFtGDtLF~  138 (258)
T 2qed_A           81 VYGPAET--------------------QDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSR--PYLFCGDTLFS  138 (258)
T ss_dssp             EEECGGG--------------------GGGTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TEEEEETTEET
T ss_pred             EECCCCC--------------------CCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCEEEEEC--CEEEECCCCCC
T ss_conf             5215433--------------------3455414640586787688457999678999886678732--40560781306


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC------------------------------------CCCHH
Q ss_conf             135663467989999999999998519997899848879------------------------------------88889
Q gi|254780758|r  160 SSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGP------------------------------------NSTIG  203 (216)
Q Consensus       160 ~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~------------------------------------~tt~~  203 (216)
                      ++|||  +++|++++|++|| ++|.+||++++|||||++                                    |||++
T Consensus       139 gg~Gr--~~~g~~~~m~~SL-~kl~~L~~~t~vypgH~y~~~nl~f~~~~~p~n~~l~~~~~~~~~~~~~~~~t~Pstl~  215 (258)
T 2qed_A          139 GGCGR--LFEGTPSQMYQSL-MKINSLPDDTLICCAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILK  215 (258)
T ss_dssp             TEECC--CSSSCHHHHHHHH-HHHHTSCTTCEEEESBCCHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTTCCCCCEEHH
T ss_pred             CCCCC--CCCCCHHHHHHHH-HHHHCCCCCCEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHH
T ss_conf             88788--8998999999999-99971993124346774554566779872888699999999999999759995772399


Q ss_pred             HHHHHCHHHHCC
Q ss_conf             998828145148
Q gi|254780758|r  204 RERRLNPFLKSN  215 (216)
Q Consensus       204 ~e~~~n~~~~~~  215 (216)
                      +||+.|||||.+
T Consensus       216 ~Ek~~NpflR~~  227 (258)
T 2qed_A          216 NERKINLFLRTE  227 (258)
T ss_dssp             HHHHHCGGGCTT
T ss_pred             HHHHHCHHHCCC
T ss_conf             997659854789


No 4  
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=100.00  E-value=0  Score=320.41  Aligned_cols=192  Identities=29%  Similarity=0.386  Sum_probs=171.5

Q ss_pred             CCEEEEEECCCCCCCEEEEEEC--CCCEEEEECCCC-CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCE
Q ss_conf             7359999708765716999988--998499983899-9999999999749975299986988521011056788607955
Q gi|254780758|r    3 KLSFHIVQVTPFKQNCTFLFDE--ESLEAVVVDPGG-DLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTI   79 (216)
Q Consensus         3 ~~~~~~i~v~~~~~N~~li~~~--~~~~~ilID~G~-~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i   79 (216)
                      +|.++++-....++|+|+|.|.  .+++|++||||. +.+.+++.+++.++++++|++||.|+||++|+..|++++++..
T Consensus         2 ~m~~~q~~~~~~~~~sYli~d~~~~t~eaivIDP~~~~~~~~~~~i~~~~~~i~~Il~TH~H~DH~~g~~~l~~~~~~~~   81 (245)
T 2gcu_A            2 KLLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVK   81 (245)
T ss_dssp             CEEEEEEEETTTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCE
T ss_pred             CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf             43788714899730899998588899989999299875899999999869967899835897688713999997641541


Q ss_pred             EECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC------CCCCCC
Q ss_conf             40584389884012344443200234666674189647839976201233101222472100000123------432111
Q gi|254780758|r   80 IGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFE------NNFAHL  153 (216)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~------~~~lft  153 (216)
                      +.....                     .....+..+++++++.+|+.++++++||||||||+||++.+      .+++||
T Consensus        82 ~~~~~~---------------------~~~~~d~~~~dgd~~~iG~~~l~vi~TPGHT~gsv~~~~~d~~~~~~~~~lFt  140 (245)
T 2gcu_A           82 SVISKA---------------------SGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFT  140 (245)
T ss_dssp             EEEEGG---------------------GCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEE
T ss_pred             CCCCCC---------------------CCCCCCEEECCCCCCEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEE
T ss_conf             000124---------------------67667566148872148989999997789886338999436677776637995


Q ss_pred             CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CCCCHHHHHHHCHHHHCC
Q ss_conf             10000013566346798999999999999851999789984887----988889998828145148
Q gi|254780758|r  154 GDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHG----PNSTIGRERRLNPFLKSN  215 (216)
Q Consensus       154 GD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG----~~tt~~~e~~~n~~~~~~  215 (216)
                      ||+||.+||||+|+++|+..+|++|+++++..||++|+||||||    +.||+++||++||||+.+
T Consensus       141 GDtLF~g~~Gr~d~~~g~~~~l~~sl~~~l~~Lp~~t~i~pGH~~~~~~~tt~~~e~~~Np~l~~~  206 (245)
T 2gcu_A          141 GDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKD  206 (245)
T ss_dssp             ETTSBTTBCCCCSSTTCCHHHHHHHHHHHTTTSCTTCEEEESBCSSSCCCEEHHHHHHHCTTTTSC
T ss_pred             CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCHHHHHH
T ss_conf             476057756367889886999999998675459951799778788744443367565059999867


No 5  
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=100.00  E-value=0  Score=322.11  Aligned_cols=186  Identities=25%  Similarity=0.393  Sum_probs=164.5

Q ss_pred             CEEEEEECCCCCCC-EEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf             35999970876571-69999889984999838999999999999749975299986988521011056788607955405
Q gi|254780758|r    4 LSFHIVQVTPFKQN-CTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGP   82 (216)
Q Consensus         4 ~~~~~i~v~~~~~N-~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~   82 (216)
                      |++++||+  +++| +|+|.++++++|++|||| +.+.+++.+++.++++++|++||.|+||++|+..|++.+++..++.
T Consensus         1 m~i~~ip~--l~DNysYli~d~~t~~a~vIDP~-~~~~i~~~~~~~~l~l~~Il~TH~H~DHi~g~~~l~~~~~~~~~~~   77 (260)
T 1qh5_A            1 MKVEVLPA--LTDNYMYLVIDDETKEAAIVDPV-QPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYG   77 (260)
T ss_dssp             CEEEEEEE--TTTEEEEEEEETTTTEEEEESCS-SHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEE
T ss_pred             CEEEEEEE--ECCEEEEEEEECCCCEEEEEECC-CCHHHHHHHHHCCCEEEEEEECCCCHHHHCCHHHHHCCCCCCEECC
T ss_conf             95789410--34268999998999989999089-8899999999779968899947898567510443101157724413


Q ss_pred             CHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCHH
Q ss_conf             843898840123444432002346666741896478399762012331012224721000001234-----321111000
Q gi|254780758|r   83 HKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFEN-----NFAHLGDTL  157 (216)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~-----~~lftGD~l  157 (216)
                      ...                     .....+..+.+|+.+.+|+.+++|++||||||||+||++++.     +++||||+|
T Consensus        78 ~~~---------------------~~~~~~~~~~~gd~~~~g~~~~~vi~TPGHT~gsv~~~~~~~~~~~~~~lFtGDtL  136 (260)
T 1qh5_A           78 GDD---------------------RIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTL  136 (260)
T ss_dssp             SCT---------------------TSTTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTE
T ss_pred             CCC---------------------CCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEECCCE
T ss_conf             334---------------------56533223667738998999999998458888857899847888756517855744


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC------------------------------------CC
Q ss_conf             001356634679899999999999985199978998488798------------------------------------88
Q gi|254780758|r  158 FRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPN------------------------------------ST  201 (216)
Q Consensus       158 f~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~------------------------------------tt  201 (216)
                      |.+||||+  ++|+..+|+.|+++++..||++++||||||+.                                    ||
T Consensus       137 F~gg~Gr~--~~g~~~~l~~si~~~l~~Lpd~t~vypGH~y~~~n~~f~~~~~~~n~~l~~~~~~~~~~~~~~~~tvpst  214 (260)
T 1qh5_A          137 FVAGCGKF--YEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPST  214 (260)
T ss_dssp             ETTEECCC--TTCCHHHHHHHHHTTTTTSCTTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred             ECCCCCCC--CCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             36876688--8999899989998898529976379526667655467798857468999999999998987799957720


Q ss_pred             HHHHHHHCHHHHCC
Q ss_conf             89998828145148
Q gi|254780758|r  202 IGRERRLNPFLKSN  215 (216)
Q Consensus       202 ~~~e~~~n~~~~~~  215 (216)
                      ++.||+.|||||.+
T Consensus       215 l~~E~~~NPflr~~  228 (260)
T 1qh5_A          215 LAEEFTYNPFMRVR  228 (260)
T ss_dssp             HHHHHHHCTTTTTT
T ss_pred             HHHHHHHCCCCCCC
T ss_conf             99997649301479


No 6  
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrolase; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=100.00  E-value=0  Score=312.59  Aligned_cols=197  Identities=26%  Similarity=0.368  Sum_probs=161.9

Q ss_pred             CCCCEEEEEECCCCCCC-EEEEEECCCCEEEEECCCCCHHHHHHHHHHC---------CCCEEEEEECCCCCCCCCCCHH
Q ss_conf             97735999970876571-6999988998499983899999999999974---------9975299986988521011056
Q gi|254780758|r    1 MSKLSFHIVQVTPFKQN-CTFLFDEESLEAVVVDPGGDLDIIKDVIQSR---------NFHVKQIWITHGHVDHVGGAAQ   70 (216)
Q Consensus         1 m~~~~~~~i~v~~~~~N-~~li~~~~~~~~ilID~G~~~~~i~~~l~~~---------~~~i~~Ii~TH~H~DH~gg~~~   70 (216)
                      |+.|++.+||  .+++| +|+|.++++++|++||||++++.+++.+++.         ++++++|++||.|+||++|+..
T Consensus        26 ~~~~~v~~iP--~l~DNysYLI~d~~t~ea~vIDPg~d~~~il~~i~~~~~~~~~~~~~l~l~~ILlTH~H~DHigG~~~  103 (311)
T 2p18_A           26 GSAFSVTVVP--TLKDNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAK  103 (311)
T ss_dssp             TTTEEEEEEE--ETTTEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHH
T ss_pred             CCCEEEEEEE--ECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHH
T ss_conf             5620899950--00642899999899997999918986189999999988753112369768799827888722524999


Q ss_pred             HHHHHCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             788607955405843898840123444432002346666741896478399762012331012224721000001234--
Q gi|254780758|r   71 LKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFEN--  148 (216)
Q Consensus        71 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~--  148 (216)
                      |++++++........              ............++.+++++++.+|+.++++++|||||+||+||++++.  
T Consensus       104 L~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~dgd~i~~G~~~l~vi~tPGHT~ghv~~~~~~~~~  169 (311)
T 2p18_A          104 LKAELEAMNSTVPVV--------------VVGGANDSIPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQH  169 (311)
T ss_dssp             HHHHHHSCC--CCCE--------------EEEEGGGTCTTCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTC
T ss_pred             HHHHHCCCCCCCCEE--------------EECCHHCCCCCCCEEECCCCEEEECCEEEEEEEECCCCCCCEEEEECCCCC
T ss_conf             999847853223103--------------411311068778466248970579999999986445577636999846777


Q ss_pred             ----CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH-------HHHCCCCCEEEEECCCC-------------------
Q ss_conf             ----321111000001356634679899999999999-------98519997899848879-------------------
Q gi|254780758|r  149 ----NFAHLGDTLFRSSIGRTDILHGDYQQLINSINN-------KILPLGDEISFVCGHGP-------------------  198 (216)
Q Consensus       149 ----~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~-------~l~~l~~~~~v~PgHG~-------------------  198 (216)
                          .++|+||+||.++|||  +|+|+..+|++||++       ++..||++|+||||||+                   
T Consensus       170 ~~~~~~lFtGDtlF~gg~Gr--~~~g~~~~~~~SL~kl~~~~~~~l~~Lpd~t~IyPGH~y~~~nl~f~~~~~p~~~~~~  247 (311)
T 2p18_A          170 PNDGVALFTGDTMFIAGIGA--FFEGDEKDMCRAMEKVYHIHKGNDYALDKVTFIFPGHEYTSGFMTFSEKTFPDRASDD  247 (311)
T ss_dssp             GGGCEEEEEETTEETTEECC--CTTSCHHHHHHHHHHHHTTTGGGTTGGGGGEEEEESBCCHHHHHHHHHHHCSCTTSHH
T ss_pred             CCCCCEEEECCEECCCCCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHH
T ss_conf             76466799899952477778--9997999999999999986541445799985999187232466667765078743357


Q ss_pred             ----------------------CCCHHHHHHHCHHHHCC
Q ss_conf             ----------------------88889998828145148
Q gi|254780758|r  199 ----------------------NSTIGRERRLNPFLKSN  215 (216)
Q Consensus       199 ----------------------~tt~~~e~~~n~~~~~~  215 (216)
                                            |||++.||+.|||||.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~pt~Pstl~~E~~~Npflr~~  286 (311)
T 2p18_A          248 LAFIQAQRAKYAAAVKTGDPSVPSSLAEEKRQNLFLRVA  286 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCTTGGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf             889999999999998769998897599998749162789


No 7  
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=100.00  E-value=0  Score=304.36  Aligned_cols=202  Identities=34%  Similarity=0.517  Sum_probs=171.0

Q ss_pred             CEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECC
Q ss_conf             35999970876571699998899849998389999999999997499752999869885210110567886079554058
Q gi|254780758|r    4 LSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPH   83 (216)
Q Consensus         4 ~~~~~i~v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~   83 (216)
                      |++..+++||+++|||+|.++  ++++|||||.+.+.+++.+++.+.++++|++||.|+||++|+.+|++++++.++...
T Consensus         1 m~i~~~~~Gp~~~N~ylI~~~--~~~ilID~G~~~~~~~~~l~~~~~~~~~vi~TH~H~DH~~g~~~l~~~~~~~~~~~~   78 (207)
T 2zwr_A            1 MRVFPVTLGPLQENAYLVETG--EGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHP   78 (207)
T ss_dssp             CEEEEEEETTTTEEEEEEEET--TEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECG
T ss_pred             CEEEEEEECCHHCEEEEEEEC--CEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCEEECC
T ss_conf             989999708811889999989--989999498699999999998799724999799976675219999998699489613


Q ss_pred             HHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf             43898840123444432002346666741896478399762012331012224721000001234321111000001356
Q gi|254780758|r   84 KDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIG  163 (216)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G  163 (216)
                      .+.... ............ ...........+++++.+    ..++++++||||+||+++|++++++||+||.++.++++
T Consensus        79 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~----~~~~vi~~PGHt~g~~~~~~~~~~~lf~GD~~~~~~~~  152 (207)
T 2zwr_A           79 LDLPLY-EGADLAARAWGL-AIPKPPLPVRPLEEGMRL----FGFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVG  152 (207)
T ss_dssp             GGHHHH-HTHHHHHHHTTC-CCCCCCSCCEECCTTCEE----TTEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEEC
T ss_pred             CCCCCC-CCCHHHHHCCCC-CCCCCCCCCCCCCCCCEE----EEEEEECCCCCCCCCEEEEECCCCEEEECCEECCCCCC
T ss_conf             322000-362022101364-323675430002245157----77998324887878479998778988863570368845


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCHHHHC
Q ss_conf             634679899999999999985199978998488798888999882814514
Q gi|254780758|r  164 RTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRERRLNPFLKS  214 (216)
Q Consensus       164 ~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e~~~n~~~~~  214 (216)
                      +.+++++|..+|++|| +|+++|+++++|+|||||+||+++||++|||||.
T Consensus       153 ~~~~~~~d~~~~~~sl-~kl~~l~~~~~i~PGHG~~tt~g~e~~~n~~l~~  202 (207)
T 2zwr_A          153 RYDLPGADPKALFASL-KRLLSLPPETRVHPGHGPGTTLGLEARTNPFLTG  202 (207)
T ss_dssp             CSSSTTCCHHHHHHHH-HHHTTSCTTCEEEESBSCCEEHHHHHHHCTTC--
T ss_pred             CCCCCCCCHHHHHHHH-HHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCCC
T ss_conf             6567788999999999-9997589986999999986428999854902384


No 8  
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=100.00  E-value=1.5e-34  Score=219.19  Aligned_cols=191  Identities=23%  Similarity=0.272  Sum_probs=141.1

Q ss_pred             EEECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHC-CCEEE
Q ss_conf             99708765716999988998499983899--99999999997499---75299986988521011056788607-95540
Q gi|254780758|r    8 IVQVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLS-LTIIG   81 (216)
Q Consensus         8 ~i~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~-~~i~~   81 (216)
                      +..+|..+.|||++.++++ .++|||||.  +.+.+++.+++.+.   +|++|++||.|+||+||+..|.++++ +++++
T Consensus        16 ~~~~g~~~~~~yll~~g~~-~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~   94 (303)
T 2vw8_A           16 LCLLGDVQVPVFLLRLGEA-SWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLA   94 (303)
T ss_dssp             EEEESCTTSCEEEEEEETT-EEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEE
T ss_pred             EEECCCCCCEEEEEEECCC-CEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHHCCCCCEEEE
T ss_conf             3313767527999997998-689995989852999999999828982427989959099865086345542167866994


Q ss_pred             CCHHHHHHHCCHHHHHH-------HH-----HCCCCCCCCCCEEEECCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             58438988401234444-------32-----0023466667418964783997620-12331012224721000001234
Q gi|254780758|r   82 PHKDDAAMMGKVDEQAR-------LL-----SIRMNARNASSDRWLQDGDTLLLGT-HIFKVFHCPGHSPGHVIYVNFEN  148 (216)
Q Consensus        82 ~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~l~~gd~i~lg~-~~~~vi~tPGHt~g~~~~~~~~~  148 (216)
                      +..+...+ ........       ..     ..........++..+.+|+++.+|+ ..++++++||||+||+++|+++.
T Consensus        95 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~~PGHt~g~~~~~~~~~  173 (303)
T 2vw8_A           95 SERTCQAW-KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRR  173 (303)
T ss_dssp             EHHHHHHT-TCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEETTT
T ss_pred             CHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEECCC
T ss_conf             48899987-36301345777776543221024555556667856947999898578226732667996998756371799


Q ss_pred             CCCCCCCHHHHC--CCCCCC-CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             321111000001--356634-67989999999999998519997899848879888
Q gi|254780758|r  149 NFAHLGDTLFRS--SIGRTD-ILHGDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       149 ~~lftGD~lf~~--~~G~~d-~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      +++|+||+++..  ..+.+. .+.+|..++++|+ +++..++++..|+|||||..+
T Consensus       174 ~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl-~rl~~l~~~~~i~PgHG~~~~  228 (303)
T 2vw8_A          174 RRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESL-ERLQRLPTLLQLIPGHGGLLR  228 (303)
T ss_dssp             TEEEEETTTCEECTTTCSEECCCSSCHHHHHHHH-HHHHTSSCCSEEEESSSCEEE
T ss_pred             CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCCEEECCCCCCCC
T ss_conf             9999828347778897766889997799999999-999768999899999997338


No 9  
>2gmn_A Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobium japonicum usda 110} SCOP: d.157.1.1
Probab=100.00  E-value=6.9e-34  Score=215.39  Aligned_cols=200  Identities=22%  Similarity=0.312  Sum_probs=153.2

Q ss_pred             EEECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf             99708765716999988998499983899--99999999997499---75299986988521011056788607955405
Q gi|254780758|r    8 IVQVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLSLTIIGP   82 (216)
Q Consensus         8 ~i~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~   82 (216)
                      +..||..+.|+|+|..++  .++|||+|.  +.+.+++.|++.+.   +|++|++||.|+||+||+++|++.+++++|++
T Consensus        27 vy~vg~~~~n~ylI~~~~--~~iLID~G~~~~~~~i~~~l~~~g~~~~~v~~ii~TH~H~DH~gg~~~l~~~~~a~i~~~  104 (274)
T 2gmn_A           27 IYYVGTDGIAVYVIKTSQ--GLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAG  104 (274)
T ss_dssp             EEECCCSSSCCEEEEETT--EEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHHCCEEEEE
T ss_pred             EEEECCCCEEEEEEEECC--EEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHHCCCEEEEE
T ss_conf             999899988999999899--979990989434999999999759981330399969899635062556577539848750


Q ss_pred             CHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC--
Q ss_conf             843898840123444432002346666741896478399762012331012224721000001234321111000001--
Q gi|254780758|r   83 HKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRS--  160 (216)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~--  160 (216)
                      ..+.. +++...................+++.+++++++.+|+.+++++++||||+||++++++..+.+++||.+|..  
T Consensus       105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~~g~~~~lg~~~i~~i~tpGHt~g~~~~~~~~~~~~~~~d~l~~~~~  183 (274)
T 2gmn_A          105 ERDKP-LLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSG  183 (274)
T ss_dssp             GGGHH-HHHHTCCTTCTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCC
T ss_pred             HHHHH-HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECC
T ss_conf             10104-44323333221123346688764089405753422764135773798899878999864557635887999568


Q ss_pred             ------CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH------HCHHHH
Q ss_conf             ------35663467989999999999998519997899848879888899988------281451
Q gi|254780758|r  161 ------SIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRERR------LNPFLK  213 (216)
Q Consensus       161 ------~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e~~------~n~~~~  213 (216)
                            .+|++++ .++..++.+|+ +++..+++++ |+||||+.+....++.      .|+|++
T Consensus       184 ~~~~~~~~~~~~~-~~~~~~~~~sl-~~l~~l~~d~-vipgHg~~~~~~~~~~~~~~~~~~~~~~  245 (274)
T 2gmn_A          184 TVALNRLVGQPTY-AGIVDDYRATF-AKAKAMKIDV-LLGPHPEVYGMQAKRAEMKDGAPNPFIK  245 (274)
T ss_dssp             CCTTCCCSSSCSS-TTHHHHHHHHH-HHHHHSCCSE-EECSSGGGTTHHHHHHHCCTTSCCTTCC
T ss_pred             CCCCCCCCCCCCC-CCCHHHHHHHH-HHHHCCCCCE-EECCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf             7467777377899-98899999999-9997699999-9889897547389998665258884469


No 10 
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8}
Probab=100.00  E-value=8.7e-34  Score=214.80  Aligned_cols=183  Identities=21%  Similarity=0.269  Sum_probs=133.9

Q ss_pred             CCCEEEEEECCCCEEEEECCCCCH----HHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHH
Q ss_conf             571699998899849998389999----999999997499---7529998698852101105678860795540584389
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGDL----DIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDA   87 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~~----~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~   87 (216)
                      .+|||+|.+++  .++|||||...    +.+.+.+++.++   +|++|++||+|.||+||+..|++ .+++++++..+..
T Consensus        21 ~vN~yli~~~~--~~vlIDtG~~~~~~~~~l~~~l~~~g~~~~~I~~Vi~TH~H~DH~Gg~~~l~~-~g~~v~~~~~~~~   97 (317)
T 2zo4_A           21 TVNLYLLQGAG--EVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEG-LGARVFLHEEEFA   97 (317)
T ss_dssp             EEEEEEEEETT--EEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHH-TTCEEEEEGGGTT
T ss_pred             CEEEEEEEECC--EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH-CCCCEECCHHHHH
T ss_conf             67999999899--89999899997789999999999749997772499979988222221999974-5998313788888


Q ss_pred             HH---HCCHH----HHHHH------------------HHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             88---40123----44443------------------2002346666741896478399762012331012224721000
Q gi|254780758|r   88 AM---MGKVD----EQARL------------------LSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVI  142 (216)
Q Consensus        88 ~~---~~~~~----~~~~~------------------~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~  142 (216)
                      ..   .....    .....                  ........+..++..+.+|+++.+|+.+++++++||||+||++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~gg~~~~vi~~PGHt~~~~~  177 (317)
T 2zo4_A           98 RGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAA  177 (317)
T ss_dssp             THHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSSTTCEE
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCEEECCCCCCCCCCCEE
T ss_conf             88765405055678888765421783333333443201235555688886794478556438845845778878998789


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCCC----CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf             001234321111000001356634----679899999999999985199978998488798888
Q gi|254780758|r  143 YVNFENNFAHLGDTLFRSSIGRTD----ILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTI  202 (216)
Q Consensus       143 ~~~~~~~~lftGD~lf~~~~G~~d----~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~  202 (216)
                      +|+++.+++|+||+++....+...    .+..|..++++|| ++++++++++ ++||||.+.+-
T Consensus       178 ~~~~~~~vlf~GD~l~~~~~~~~~~~~~~~~~~~~~~~~Sl-~~l~~l~~~~-v~p~Hg~~~~~  239 (317)
T 2zo4_A          178 FYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSL-DRLADLGARV-AYAGHFGPIAD  239 (317)
T ss_dssp             EEETTTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHH-HHHHTSCCSE-EEESSSSCBSC
T ss_pred             EEECCCCEEEEECEECCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCE-EECCCCCCCCC
T ss_conf             99868885787048637877866788899888599999999-9986699989-98899997789


No 11 
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=100.00  E-value=9.5e-33  Score=208.76  Aligned_cols=172  Identities=15%  Similarity=0.159  Sum_probs=131.4

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHH
Q ss_conf             6571699998899849998389999---9999999974-99752999869885210110567886079554058438988
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQSR-NFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAM   89 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~~-~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~   89 (216)
                      +.+|+|+|.+++  +++|||+|.+.   +.+++.+++. +.+|++|++||.|+||+||+..|+++ ++++|+.......+
T Consensus        35 ~~~N~~li~~~~--~~iliDt~~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~~~-~~~v~~~~~~~~~~  111 (232)
T 1a7t_A           35 VPSNGMIVINNH--QAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRK-GVQSYANQMTIDLA  111 (232)
T ss_dssp             EEEEEEEEEETT--EEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHT-TCEEEEEHHHHHHH
T ss_pred             ECCEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC-CCEEEEECCHHHHH
T ss_conf             275699999899--999996989989999999999871399738999799885222339999858-99599822025565


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC-CC
Q ss_conf             40123444432002346666741896478399762012331012-22472100000123432111100000135663-46
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRT-DI  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~-d~  167 (216)
                      ..              .....+...+.++.++.+|+.+++++++ ||||+||+++|++++++||+||.+|.+..... ..
T Consensus       112 ~~--------------~~~~~~~~~~~~~~~~~~g~~~v~~~~~~pGHt~g~~~~~~~~~~vlf~GD~~~~~~~~~~~~~  177 (232)
T 1a7t_A          112 KE--------------KGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQTTSIGNI  177 (232)
T ss_dssp             HH--------------HTCCCCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCC
T ss_pred             HH--------------CCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCC
T ss_conf             43--------------2566660541576199989999999842389998727999589999998886278986676889


Q ss_pred             CCCCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHH
Q ss_conf             7989999999999998519-99789984887988889
Q gi|254780758|r  168 LHGDYQQLINSINNKILPL-GDEISFVCGHGPNSTIG  203 (216)
Q Consensus       168 ~~~d~~~~~~sl~~~l~~l-~~~~~v~PgHG~~tt~~  203 (216)
                      ++++..+|++||+ +++++ ++...|+||||++..-.
T Consensus       178 ~~~~~~~~~~sl~-~l~~~~~~~~~i~pgHG~~~~~~  213 (232)
T 1a7t_A          178 SDADVTAWPKTLD-KVKAKFPSARYVVPGHGNYGGTE  213 (232)
T ss_dssp             TTCCTTTHHHHHH-HHHHHCTTCSEEEESSSCCBCTH
T ss_pred             CCCCHHHHHHHHH-HHHCCCCCCEEEECCCCCCCCHH
T ss_conf             9999999999999-99712899819993899978989


No 12 
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=100.00  E-value=4.9e-32  Score=204.63  Aligned_cols=171  Identities=16%  Similarity=0.188  Sum_probs=130.5

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHH
Q ss_conf             6571699998899849998389999---999999997-499752999869885210110567886079554058438988
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQS-RNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAM   89 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~   89 (216)
                      +.+|+++|.+++  .++|||+|...   +.+++.+++ .+.++++|++||.|+||++|+..|.+. ++++++.......+
T Consensus        25 ~~~N~~~i~~~~--~~iliD~~~~~~~~~~l~~~i~~~~~~~i~~vi~TH~H~DH~~G~~~~~~~-~~~i~~~~~~~~~~  101 (223)
T 1m2x_A           25 YAANAVYLVTDK--GVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKI-GAKTYSTKMTDSIL  101 (223)
T ss_dssp             EEEEEEEEEETT--EEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHHT-TCEEEEEHHHHHHH
T ss_pred             ECCEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC-CCEEEECCCHHHHH
T ss_conf             766799999899--899997999989999999999884199758999679997510619999868-99799612044444


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC-CC
Q ss_conf             40123444432002346666741896478399762012331012-22472100000123432111100000135663-46
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRT-DI  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~-d~  167 (216)
                      ...              ....++..++++.++.+|+.+++++++ ||||+|++++|++++++||+||.+|.+..... ..
T Consensus       102 ~~~--------------~~~~~~~~~~~~~~~~lg~~~i~~~~~~pgHt~~~~~~~~p~~~vlf~GD~~~~~~~~~~~~~  167 (223)
T 1m2x_A          102 AKE--------------NKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVGGCIIKSADSKDLGYI  167 (223)
T ss_dssp             HHT--------------TCCCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEETTTTEEEEETTSCCTTCSSCCCC
T ss_pred             HCC--------------CCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCC
T ss_conf             203--------------665674123563389989989998246799999868999479999998276888996774788


Q ss_pred             CCCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCH
Q ss_conf             798999999999999851-99978998488798888
Q gi|254780758|r  168 LHGDYQQLINSINNKILP-LGDEISFVCGHGPNSTI  202 (216)
Q Consensus       168 ~~~d~~~~~~sl~~~l~~-l~~~~~v~PgHG~~tt~  202 (216)
                      +.++..+|++||+ +++. .++...|+||||+++.-
T Consensus       168 ~~~~~~~~~~sl~-~l~~~~~~~~~viPgHG~~~~~  202 (223)
T 1m2x_A          168 GEAYVNDWTQSVH-NIQQKFSGAQYVVAGHDDWKDQ  202 (223)
T ss_dssp             TTCCHHHHHHHHH-HHHHHTTTCSEEEESBSCCCST
T ss_pred             CCCCHHHHHHHHH-HHHHHCCCCCEEECCCCCCCCH
T ss_conf             9989999999999-9970079997999798985898


No 13 
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes}
Probab=100.00  E-value=2.9e-32  Score=205.97  Aligned_cols=176  Identities=20%  Similarity=0.268  Sum_probs=134.2

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCC---HHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHH
Q ss_conf             657169999889984999838999---99999999974-99752999869885210110567886079554058438988
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGD---LDIIKDVIQSR-NFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAM   89 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~---~~~i~~~l~~~-~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~   89 (216)
                      +++|+++|..++  .++|||+|.+   .+.+++.+++. +.++++|++||.|+||+||+..|.++ ++++|++......+
T Consensus        29 ~~~N~~~i~~~~--~~vlIDtg~~~~~~~~l~~~i~~~~~~~i~~ii~TH~H~DH~gG~~~~~~~-~~~i~a~~~~~~~~  105 (219)
T 3l6n_A           29 YSANSMYLVTKK--GVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNK-GIKTYATAKTNEFL  105 (219)
T ss_dssp             EEEEEEEEEETT--EEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHT-TCEEEECHHHHHHH
T ss_pred             EEEEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC-CCEEEEHHHHHHHH
T ss_conf             700599999899--999992989989999999999860299638999799995433868999628-98899602222332


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC-C
Q ss_conf             40123444432002346666741896478399762012331012-224721000001234321111000001356634-6
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTD-I  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d-~  167 (216)
                      ..              .....+...+.+++++.+|+.+++++++ ||||+|++++|+++.++||+||++|....+... .
T Consensus       106 ~~--------------~~~~~~~~~~~~~~~~~~g~~~~~v~~~~pgHt~g~~~v~~~~~~vlf~GD~~~~~~~~~~~~~  171 (219)
T 3l6n_A          106 KK--------------DGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPKYNVLDGGCLVKSNSATDLGYI  171 (219)
T ss_dssp             HH--------------TTCCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEEEETTSCCTTCSSCCCC
T ss_pred             HC--------------CCCCCCEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCC
T ss_conf             10--------------1334412882388578628856899724799999858999478999999283778985686888


Q ss_pred             CCCCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHH
Q ss_conf             7989999999999998519-997899848879888899988
Q gi|254780758|r  168 LHGDYQQLINSINNKILPL-GDEISFVCGHGPNSTIGRERR  207 (216)
Q Consensus       168 ~~~d~~~~~~sl~~~l~~l-~~~~~v~PgHG~~tt~~~e~~  207 (216)
                      ..+|..+|++||+ +++++ ++...|+||||++..-+.-++
T Consensus       172 ~~~~~~~~~~sl~-~l~~~~~~~~~ivpgHg~~~~~~~i~~  211 (219)
T 3l6n_A          172 KEANVEQWPKTIN-KLKAKYSKATLIIPGHDEWKGGGHVEH  211 (219)
T ss_dssp             TTCCTTTHHHHHH-HHHHHCTTCSEEEESBSCCTTSCHHHH
T ss_pred             CCCCHHHHHHHHH-HHHHCCCCCCEEECCCCCCCCHHHHHH
T ss_conf             9989999999999-997007999899948998789899999


No 14 
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=100.00  E-value=1.1e-32  Score=208.29  Aligned_cols=192  Identities=17%  Similarity=0.187  Sum_probs=138.4

Q ss_pred             CCCCEEEEEECCCCC----CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHC
Q ss_conf             977359999708765----7169999889984999838999999999999749975299986988521011056788607
Q gi|254780758|r    1 MSKLSFHIVQVTPFK----QNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLS   76 (216)
Q Consensus         1 m~~~~~~~i~v~~~~----~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~   76 (216)
                      |.---++.||++|.+    +|+|+|.++  +.++|||||.....  +.+.. -.+|++|++||.|+||+||+..|++.++
T Consensus         1 ~~~~~~~~i~~~p~~~~~~~n~~li~~~--~~~~lID~G~~~~~--~~~~~-~~~i~~VilTH~H~DH~gg~~~l~~~~~   75 (261)
T 3adr_A            1 MPCRGLHSIPAGPVEFPEIATVYVMCGE--KLTVMIDAGVSNSI--ADFSF-LDKLDYIVLTHLHIDHIGLLPELLQVYK   75 (261)
T ss_dssp             -CCCEEEEEECSCTTCGGGSEEEEEECS--SCEEEECCCCTTCC--CCCTT-CSCCCEEECSCCSGGGTTTHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCCCCCEEEEEEEEEC--CEEEEECCCCCHHH--HHHHC-CCCCCEEEECCCCCCCCCCHHHHHHCCC
T ss_conf             9878548920798676876899999949--95899879998299--98624-0678999959898644287667654356


Q ss_pred             CCEEECCHHHHHHHCCHHH-------------HHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             9554058438988401234-------------444320023466667418964783997620123310122247210000
Q gi|254780758|r   77 LTIIGPHKDDAAMMGKVDE-------------QARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIY  143 (216)
Q Consensus        77 ~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~  143 (216)
                      +++++.......+......             ....+..............+.+++.+.+|+.+++++++||||+|++++
T Consensus        76 a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~~~~~~~~~pGHt~~~~~~  155 (261)
T 3adr_A           76 AKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSV  155 (261)
T ss_dssp             CEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEE
T ss_pred             CCEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCCCEEE
T ss_conf             74333787999862501245677888876400001014665555655248833633895066100477579888876899


Q ss_pred             CCCCCCCCCCCCHHHH---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             0123432111100000---135663467989999999999998519997899848879888
Q gi|254780758|r  144 VNFENNFAHLGDTLFR---SSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       144 ~~~~~~~lftGD~lf~---~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      +.  +++||+||+++.   ..+.+++++.+|..++++|| ++++++++++ ++||||++.+
T Consensus       156 ~~--~~vlftGD~~~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~-i~pgHg~~~~  212 (261)
T 3adr_A          156 LV--DDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESL-KRQIELKPKV-VGFAHGGLVS  212 (261)
T ss_dssp             EE--TTEEEEETSSCEEETTEEECCCCSCCCHHHHHHHH-HHHHHTCCSE-EEETTTEEEC
T ss_pred             EE--CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCE-EEECCCCCCC
T ss_conf             98--99999898468677886326899998999999999-9997799899-9929998669


No 15 
>2yz3_A Metallo-beta-lactamase; enzyme-inhibitor complex, hydrolase; HET: M5P; 2.30A {Pseudomonas putida} SCOP: d.157.1.1
Probab=99.97  E-value=1.1e-31  Score=202.70  Aligned_cols=184  Identities=17%  Similarity=0.197  Sum_probs=130.3

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHH
Q ss_conf             6571699998899849998389999---999999997-499752999869885210110567886079554058438988
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQS-RNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAM   89 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~   89 (216)
                      +.+|+|+|.+++  .++|||+|++.   +.+++.+++ .+.+|++|++||.|+||+||+..|+++ ++++++.......+
T Consensus        67 ~~~N~~~v~~~~--~~vlIDtg~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gG~~~~~~~-~~~v~a~~~~~~~~  143 (266)
T 2yz3_A           67 YPSNGLIVRDGD--ELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLA  143 (266)
T ss_dssp             EEEEEEEEEETT--EEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHT-TCEEEECHHHHHHH
T ss_pred             EEEEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCHHHHHCC-CCEEEEECCHHHHH
T ss_conf             612799999899--999990999989999999999984399727999799981000875565206-97699962022333


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC-C
Q ss_conf             4012344443200234666674189647839976201233101-2224721000001234321111000001356634-6
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFH-CPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTD-I  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~-tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d-~  167 (216)
                      ...          .........+..+.+++++.+|+.+  +++ .||||+|++++|++++++||+||.+|....+... .
T Consensus       144 ~~~----------~~~~~~~~~~~~~~~~~~~~~g~v~--~~~~gpgHt~~~~~v~~p~~~vLf~GD~v~~~~~~~~~~~  211 (266)
T 2yz3_A          144 EVE----------GNEIPTHSLEGLSSSGDAVRFGPVE--LFYPGAAHSTDNLVVYVPSASVLYGGCAIYELSRTSAGNV  211 (266)
T ss_dssp             HTT----------TCCCCSEECCSCSSTTEEEEETTEE--EEECCSSSSSSCCEEEEGGGTEEEEETTSCCTTCCSCCCC
T ss_pred             HHC----------CCCCCCCCCCEECCCCCEEEECCEE--EEEECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCC
T ss_conf             321----------4667754431460468678878878--8740699999848999889999998646877886788888


Q ss_pred             CCCCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHCHHHH
Q ss_conf             7989999999999998519-997899848879888899988281451
Q gi|254780758|r  168 LHGDYQQLINSINNKILPL-GDEISFVCGHGPNSTIGRERRLNPFLK  213 (216)
Q Consensus       168 ~~~d~~~~~~sl~~~l~~l-~~~~~v~PgHG~~tt~~~e~~~n~~~~  213 (216)
                      +.+|...|++|++ +++++ ++...|+||||+++.....+.+.-++|
T Consensus       212 ~~~~~~~~~~sl~-~l~~~~pd~~~vvPGHG~~~~~~~l~~~~~~~~  257 (266)
T 2yz3_A          212 ADADLAEWPTSIE-RIQQHYPEAQFVIPGHGLPGGLDLLKHTTNVVK  257 (266)
T ss_dssp             TTCCTTTHHHHHH-HHHHHCTTCSEEEESSSCCBCTHHHHHHHHHC-
T ss_pred             CCCCHHHHHHHHH-HHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             9999999999999-997008998399879999889799999999999


No 16 
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER assymmetric UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.97  E-value=4.1e-31  Score=199.25  Aligned_cols=201  Identities=17%  Similarity=0.277  Sum_probs=143.5

Q ss_pred             EEECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf             99708765716999988998499983899--99999999997499---75299986988521011056788607955405
Q gi|254780758|r    8 IVQVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLSLTIIGP   82 (216)
Q Consensus         8 ~i~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~   82 (216)
                      +.-||..+.|||+|.+++  .++|||||.  +.+.+++.+++.++   +|++|++||.|.||+||+..+.+.+++++++.
T Consensus        17 vy~vg~~~~~~~li~~~~--~~iLID~G~~~~~~~i~~~l~~~g~~~~~i~~il~TH~H~DH~gg~~~~~~~~~a~i~~~   94 (263)
T 1k07_A           17 LYYVGTDDLASYLIVTPR--GNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVM   94 (263)
T ss_dssp             EEECCBSSBCCEEEEETT--EEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEE
T ss_pred             EEEECCCCEEEEEEEECC--EEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEEE
T ss_conf             999899990999999899--899993989520999999999769995342699978987011141999987539979994


Q ss_pred             CHHHHHHHCCHHHHHHHH-HCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf             843898840123444432-0023466667418964783997620123310122247210000012343211110000013
Q gi|254780758|r   83 HKDDAAMMGKVDEQARLL-SIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSS  161 (216)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~  161 (216)
                      ..+...+........... .......+...+..+.+++++.+|+.+++++++||||+||+|++++..+.+++||++|.++
T Consensus        95 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~PGHt~g~~~~~~~~~~~~~~~~~~~~gd  174 (263)
T 1k07_A           95 DEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGS  174 (263)
T ss_dssp             HHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEECCEEEECC
T ss_conf             05877775211100122023334667776625741674673098579999578878778999998167853878999898


Q ss_pred             CCCC--------CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH------HHHHCHHH
Q ss_conf             5663--------467989999999999998519997899848879888899------98828145
Q gi|254780758|r  162 IGRT--------DILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGR------ERRLNPFL  212 (216)
Q Consensus       162 ~G~~--------d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~------e~~~n~~~  212 (216)
                      .+..        .....+..++.+|| +++.++++++ ++||||..+.+..      +...|+|+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~-vi~gHg~~~~~~~~~~~~~~~~~~~~~  237 (263)
T 1k07_A          175 IGVNPGYKLVDNITYPKIAEDYKHSI-KVLESMRCDI-FLGSHAGMFDLKNKYVLLSKGQNNPFV  237 (263)
T ss_dssp             CCCCTTCCCSSCSSCTTHHHHHHHHH-HHHHTBCCSE-EEESBHHHHTHHHHHHHHHTTCSCTTB
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHCCCCCE-EEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf             44788875436889987799999999-9997899399-990989832658899877404778556


No 17 
>2whg_A VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BETA-alpha fold; HET: FLC; 1.90A {Pseudomonas aeruginosa} PDB: 2wrs_A* 1ko3_A 1ko2_A
Probab=99.97  E-value=1.3e-31  Score=202.11  Aligned_cols=185  Identities=16%  Similarity=0.191  Sum_probs=127.8

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCCHH---HHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHH
Q ss_conf             65716999988998499983899999---99999997-499752999869885210110567886079554058438988
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGDLD---IIKDVIQS-RNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAM   89 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~~~---~i~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~   89 (216)
                      +.+|+|+|.+++  +++|||+|++.+   .+++.+++ .+.+|++|++||.|+||+||+..|+++ ++++++.......+
T Consensus        36 ~~~N~~~i~~~~--~~vlIDtg~~~~~~~~l~~~i~~~~~~~v~~vi~TH~H~DH~gg~~~~~~~-~~~~~~~~~~~~~~  112 (230)
T 2whg_A           36 YPSNGLIVRDGD--ELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLA  112 (230)
T ss_dssp             EEEEEEEEEETT--EEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHT-TCEEEECHHHHHHH
T ss_pred             CCCEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC-CCEEEECHHHHHHH
T ss_conf             011899999699--999997989979999999999983199738999779982001609999758-99499878999999


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC-CCC
Q ss_conf             4012344443200234666674189647839976201233101222472100000123432111100000135663-467
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRT-DIL  168 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~-d~~  168 (216)
                      ...          .........+..+.+++.+.+|+.++. +.+||||+||+++|++++++||+||+++....+.. .++
T Consensus       113 ~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~pGHt~g~~~~~~~~~~vlf~GD~v~~~~~~~~~~~~  181 (230)
T 2whg_A          113 EAE----------GNEIPTHSLEGLSSSGDAVRFGPVELF-YPGAAHSTDNLVVYVPSANVLYGGCAVHELSRTSAGNVA  181 (230)
T ss_dssp             HHH----------TCCCCSEECCSCSSTTCEEEETTEEEE-CCCSSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCCT
T ss_pred             HHC----------CCCCCCCCCCEEECCCCEEEECCEEEE-EECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCC
T ss_conf             852----------766764342035036866886786899-837999989799998688999987787457878878889


Q ss_pred             CCCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHCHHHH
Q ss_conf             989999999999998519-997899848879888899988281451
Q gi|254780758|r  169 HGDYQQLINSINNKILPL-GDEISFVCGHGPNSTIGRERRLNPFLK  213 (216)
Q Consensus       169 ~~d~~~~~~sl~~~l~~l-~~~~~v~PgHG~~tt~~~e~~~n~~~~  213 (216)
                      .+|..+|++|++ +++++ ++...|+||||++.....-+.+--+++
T Consensus       182 ~~~~~~~~~sl~-~l~~~~~~~~~v~PGHG~~~~~~~l~~~~~~~~  226 (230)
T 2whg_A          182 DADLAEWPTSVE-RIQKHYPEAEVVIPGHGLPGGLDLLQHTANVVK  226 (230)
T ss_dssp             TCCTTTHHHHHH-HHHHHCTTCCEEEESSSCCBSTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHH-HHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             999999999999-997008998499969998889899999999999


No 18 
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 2bfz_A 2bg6_A 2bga_A ...
Probab=99.97  E-value=9.1e-31  Score=197.27  Aligned_cols=182  Identities=21%  Similarity=0.201  Sum_probs=132.5

Q ss_pred             CCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf             571699998899849998389999---999999997-4997529998698852101105678860795540584389884
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQS-RNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM   90 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~   90 (216)
                      .+|+|+|.+++  .++|||||...   +.+++.+++ .+.++++|++||.|+||+||+..|+++ +++++....+ ....
T Consensus        40 ~~N~~~I~~~~--~~vlID~g~~~~~~~~l~~~i~~~~~~~v~~ii~TH~H~DH~gg~~~~~~~-~~~i~~~~~~-~~~~  115 (227)
T 1mqo_A           40 PSNGLVLNTSK--GLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER-GIKAHSTALT-AELA  115 (227)
T ss_dssp             EEEEEEEEETT--EEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH-TCEEECBHHH-HHHH
T ss_pred             EEEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHC-CCEEEEECHH-HHHH
T ss_conf             14899999799--989994989989999999999974499816999678981023539999747-9989994102-3333


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC-CC
Q ss_conf             0123444432002346666741896478399762012331012-224721000001234321111000001356634-67
Q gi|254780758|r   91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTD-IL  168 (216)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d-~~  168 (216)
                      ..             .........+.+++.+.+|+.+++.++. ||||+|++++|.++.+++|+||.+|..+++..+ .+
T Consensus       116 ~~-------------~~~~~~~~~~~~~~~l~~g~~~~~~~~~~pgHt~~~~~~~~~~~~vl~~GD~i~~~~~~~~~~~~  182 (227)
T 1mqo_A          116 KK-------------NGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGNVA  182 (227)
T ss_dssp             HH-------------TTCCCCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEEEETTSCCTTCCSCCCCT
T ss_pred             HH-------------CCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCC
T ss_conf             21-------------25444332125674564188078888227987788458870678859960085679856757889


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCHHHH
Q ss_conf             989999999999998519997899848879888899988281451
Q gi|254780758|r  169 HGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRERRLNPFLK  213 (216)
Q Consensus       169 ~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e~~~n~~~~  213 (216)
                      .++..+|++||++.+...++...|+|||||+++...-+.+.-+|+
T Consensus       183 ~~~~~~~~~sl~~l~~~~~~~~~vvPgHG~~~~~~~~~~~~~~~~  227 (227)
T 1mqo_A          183 DAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDKGLLLHTLDLLK  227 (227)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBCTHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf             989999999999998337999899959896689899999999869


No 19 
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.97  E-value=1.4e-30  Score=196.10  Aligned_cols=167  Identities=17%  Similarity=0.197  Sum_probs=123.2

Q ss_pred             CCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHC
Q ss_conf             571699998899849998389999---99999999749975299986988521011056788607955405843898840
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMMG   91 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~   91 (216)
                      .+|+|+|.++  ++++|||||.+.   +.+++.+++.+.+|++|++||.|+||++|+..|.++ ++++++.......+..
T Consensus        32 ~~N~~~i~~~--~~~vliDtg~~~~~~~~~~~~i~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-~~~~~a~~~~~~~~~~  108 (228)
T 1jjt_A           32 PKHGLVVLVN--AEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSR-SIPTYASELTNELLKK  108 (228)
T ss_dssp             EEEEEEEEET--TEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHHT-TCCEEEEHHHHHHHHH
T ss_pred             CCEEEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHHHHHC-CCCEEECHHHHHHHHH
T ss_conf             8579999989--999999798998999999999996599857999789980010809999867-9988874667777763


Q ss_pred             CHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf             12344443200234666674189647839976201233101-22247210000012343211110000013566346798
Q gi|254780758|r   92 KVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFH-CPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHG  170 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~-tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d~~~~  170 (216)
                      ..              ...... ...++.+.+++..+++++ +||||+|++++|+++.+++|+||++|..+++  +++.+
T Consensus       109 ~~--------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~gHt~~~~~~~~~~~~ilf~GD~~~~~~~~--~~~~~  171 (228)
T 1jjt_A          109 DG--------------KVQATN-SFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLG--NLGDA  171 (228)
T ss_dssp             TT--------------CCCCSE-EECSSCCEEETTTEEEECCCCSSSTTCCEEEETTTTEEEEETTCCTTCCC--CCTTC
T ss_pred             CC--------------CCCCCC-CCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCC--CCCCC
T ss_conf             13--------------421122-35773599689689999827999999699993475638857772688867--57999


Q ss_pred             CHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCH
Q ss_conf             999999999999851-99978998488798888
Q gi|254780758|r  171 DYQQLINSINNKILP-LGDEISFVCGHGPNSTI  202 (216)
Q Consensus       171 d~~~~~~sl~~~l~~-l~~~~~v~PgHG~~tt~  202 (216)
                      |..+|++||+ ++++ +++...|+||||++.+-
T Consensus       172 ~~~~~~~sl~-~l~~~~~~~~~viPgHG~~~~~  203 (228)
T 1jjt_A          172 NIEAWPKSAK-LLKSKYGKAKLVVPSHSEVGDA  203 (228)
T ss_dssp             CTTTHHHHHH-HHHHHTTTCSEEEESSSCCBCT
T ss_pred             CHHHHHHHHH-HHHHHCCCCCEEEECCCCCCCH
T ss_conf             9999999999-9996489983999098843598


No 20 
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding, periplasm,; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A
Probab=99.97  E-value=1.4e-30  Score=196.19  Aligned_cols=190  Identities=15%  Similarity=0.168  Sum_probs=128.0

Q ss_pred             CCEEEEEEC--------CCCCCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHH
Q ss_conf             735999970--------876571699998899849998389999---9999999974-9975299986988521011056
Q gi|254780758|r    3 KLSFHIVQV--------TPFKQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQSR-NFHVKQIWITHGHVDHVGGAAQ   70 (216)
Q Consensus         3 ~~~~~~i~v--------~~~~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~~-~~~i~~Ii~TH~H~DH~gg~~~   70 (216)
                      -|+++++.-        ..+++|+|++..++  .++|||+|.+.   +.+.+.+++. +.++++|++||.|+||+||+..
T Consensus         2 ~~~~~~v~~~vy~~~~~~~~~~N~~~i~~~~--~~vliD~g~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~   79 (227)
T 3iog_A            2 GMSLTQVSGPVYVVEDNYYVQENSMVYFGAK--GVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAY   79 (227)
T ss_dssp             CEEEEEEETTEEEEEECSSSCEEEEEEECSS--CEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHH
T ss_pred             CCCEEEECCCEEEEECCCCCCCEEEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH
T ss_conf             8504991698699857972154289999799--86999298997999999999986149984199968999653281233


Q ss_pred             HHHHHCCCEEECCHHHHHHHCCHHHHHHH----HHCCCCCCCCCCEEEECCCCEEEEECCCCCCCC-CCCCCCCCCCCCC
Q ss_conf             78860795540584389884012344443----200234666674189647839976201233101-2224721000001
Q gi|254780758|r   71 LKEDLSLTIIGPHKDDAAMMGKVDEQARL----LSIRMNARNASSDRWLQDGDTLLLGTHIFKVFH-CPGHSPGHVIYVN  145 (216)
Q Consensus        71 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~-tPGHt~g~~~~~~  145 (216)
                      |++. +++++++......+..........    ...........++..+.+.  +.+++.++++++ +|||||||+++|+
T Consensus        80 ~~~~-~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~l~~g~v~~~~~~pGHt~g~~~~~~  156 (227)
T 3iog_A           80 WKSI-GAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHDGD--FTLQEGKVRAFYAGPAHTPDGIFVYF  156 (227)
T ss_dssp             HHHT-TCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEESSC--EEETTTTEEEECCCCSSSSSCCEEEE
T ss_pred             CCCC-CCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC--EEECCCCEEEEEECCCCCCCCEEEEE
T ss_conf             0546-83676179899998741233322222025545787656886886585--88558718999957898998664672


Q ss_pred             CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCH
Q ss_conf             23432111100000135663467989999999999998519--9978998488798888
Q gi|254780758|r  146 FENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPL--GDEISFVCGHGPNSTI  202 (216)
Q Consensus       146 ~~~~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l--~~~~~v~PgHG~~tt~  202 (216)
                      +++++||+||.++. .++  .++.+|..+|++|+ +++.++  +++ .|+||||++.+-
T Consensus       157 ~~~~vlf~GD~~~~-~~~--~~~~~~~~~~~~sl-~~l~~~~~~~~-~i~pgHg~~~~g  210 (227)
T 3iog_A          157 PDEQVLYGGCILKE-KLG--NLSFADVKAYPQTL-ERLKAMKLPIK-TVIGGHDSPLHG  210 (227)
T ss_dssp             TTTTEEECGGGSCS-SCC--CCTTCCTTHHHHHH-HHHHHTCCCCS-EEECSSSCCEEC
T ss_pred             CCCCEEEECCCCCC-CCC--CCCCCCHHHHHHHH-HHHHCCCCCCC-EEECCCCCCCCC
T ss_conf             78789997463578-967--88888999999999-99970379997-999699986789


No 21 
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.97  E-value=3.9e-30  Score=193.58  Aligned_cols=187  Identities=17%  Similarity=0.262  Sum_probs=137.8

Q ss_pred             ECCCCCCCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCCC---EEEEEECCCCCCCCCCCHHHHHHHCCCEEECCH
Q ss_conf             708765716999988998499983899--999999999974997---529998698852101105678860795540584
Q gi|254780758|r   10 QVTPFKQNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNFH---VKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHK   84 (216)
Q Consensus        10 ~v~~~~~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~~---i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~   84 (216)
                      .+|....|||+|..++  .++|||||.  ..+.+++.+++.|++   |++|++||.|.||+||+++|.+++++++++...
T Consensus        32 ~vg~~~~~~~li~~~~--g~iLID~G~~~~~~~~~~~l~~~g~~~~~I~~Il~TH~H~DH~gg~~~l~~~~~~~V~~~~~  109 (269)
T 1sml_A           32 QIGTEDLTALLVQTPD--GAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAE  109 (269)
T ss_dssp             ECSBTTBCCEEEEETT--EEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHH
T ss_pred             EECCCCEEEEEEEECC--EEEEECCCCCCHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCCCHHHHHHHHCCCEEECHH
T ss_conf             9899992899999899--76998489951299999999974998032549997999835415099999986994763788


Q ss_pred             HHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf             38988401234444320023466667418964783997620123310122247210000012343211110000013566
Q gi|254780758|r   85 DDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGR  164 (216)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G~  164 (216)
                      ....+.... ......+......+..+++.+.+|+++.+|+.+++++++|||++|++++++++.+..+++|.+|.+.++.
T Consensus       110 ~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~g~~l~lg~~~~~~~~~PgH~~g~~~~~~~~~~~~~~~~v~~~~~~~~  188 (269)
T 1sml_A          110 SAVLLARGG-SDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLSA  188 (269)
T ss_dssp             HHHHHHTTT-CSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCC
T ss_pred             HHHHHHHCC-HHHHHHCCCCCCCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
T ss_conf             988775011-1223312356788742525637998885099258999678889788899996345785217998388678


Q ss_pred             CCC-------CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             346-------7989999999999998519997899848879888
Q gi|254780758|r  165 TDI-------LHGDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       165 ~d~-------~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      .++       ...+..++.+|+ ++++.+++++ ++|||+..+.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~sl-~~l~~l~~~~-l~~~H~g~~~  230 (269)
T 1sml_A          189 PGYQLQGNPRYPHLIEDYRRSF-ATVRALPCDV-LLTPHPGASN  230 (269)
T ss_dssp             TTCCCSSCTTCTTHHHHHHHHH-HHHHTSCCSE-EECSSGGGGT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCCE-EECCCCCCCC
T ss_conf             9968756899986599999999-9997789899-9909987232


No 22 
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.96  E-value=3e-29  Score=188.42  Aligned_cols=187  Identities=14%  Similarity=0.132  Sum_probs=136.7

Q ss_pred             CCCCCCEEEEEECCCCEEEEECCCCCH---HHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHH
Q ss_conf             876571699998899849998389999---9999999974-997529998698852101105678860795540584389
Q gi|254780758|r   12 TPFKQNCTFLFDEESLEAVVVDPGGDL---DIIKDVIQSR-NFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDA   87 (216)
Q Consensus        12 ~~~~~N~~li~~~~~~~~ilID~G~~~---~~i~~~l~~~-~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~   87 (216)
                      +.+.+|++++..++ +.++|||+|...   +.+++.+++. +.++++|++||+|+||+||+..|++ .+++++++.....
T Consensus        26 ~~~~~n~~~i~~~d-g~viliD~~~~~~~~~~l~~~~~~~~~~~v~~II~TH~H~DH~Gg~~~~~~-~~~~i~a~~~~~~  103 (246)
T 2fhx_A           26 DFYSSNVLVAKMLD-GTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK-MGAETWSSDLTKQ  103 (246)
T ss_dssp             TTTTEEEEEEECTT-SEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH-TTCEEEEEHHHHH
T ss_pred             CCCCCEEEEEECCC-CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCC-CCCEEEECHHHHH
T ss_conf             76761499999389-879999999998999999999997459966999979999653488888524-7965885388889


Q ss_pred             HHHCCHHHHHHH------------HHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             884012344443------------2002346666741896478399762012331012-224721000001234321111
Q gi|254780758|r   88 AMMGKVDEQARL------------LSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC-PGHSPGHVIYVNFENNFAHLG  154 (216)
Q Consensus        88 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t-PGHt~g~~~~~~~~~~~lftG  154 (216)
                      .+..........            ...........+...+.+++++.+|+..+++++. ||||+++++++.++.+++|+|
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ght~~~~~~~~~~~~vl~~G  183 (246)
T 2fhx_A          104 LRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGG  183 (246)
T ss_dssp             HHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEE
T ss_pred             HHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEE
T ss_conf             98860200001234430111100023566665788607737998999799456764137865678336884789999992


Q ss_pred             CHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf             00000135663467989999999999998519997899848879888899
Q gi|254780758|r  155 DTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGR  204 (216)
Q Consensus       155 D~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~  204 (216)
                      |.+|.+.++.  .+.+|..+|++|| ++++++++++ ++||||+..+...
T Consensus       184 D~~~~~~~~~--~~~~~~~~~~~sL-~~l~~l~~~~-l~pGHG~~~~~~~  229 (246)
T 2fhx_A          184 CMIKPKELGY--LGDANVKAWPDSA-RRLKKFDAKI-VIPGHGEWGGPEM  229 (246)
T ss_dssp             TTCCSSCCCC--CTTCCTTTHHHHH-HHGGGSCCSE-EEESBSCCBSTHH
T ss_pred             CEECCCCCCC--CCCCCHHHHHHHH-HHHHCCCCCE-EEECCCCCCCHHH
T ss_conf             7617899888--8999999999999-9997799499-9949999899999


No 23 
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.96  E-value=1.8e-28  Score=183.95  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=125.2

Q ss_pred             CCCCC-CCEEEEEECCCCEEEEECCCCCHHH---HHHHH-HHC-CCCEEEEEECCCCCCCCCCCHHHHHHH-----CCCE
Q ss_conf             08765-7169999889984999838999999---99999-974-997529998698852101105678860-----7955
Q gi|254780758|r   11 VTPFK-QNCTFLFDEESLEAVVVDPGGDLDI---IKDVI-QSR-NFHVKQIWITHGHVDHVGGAAQLKEDL-----SLTI   79 (216)
Q Consensus        11 v~~~~-~N~~li~~~~~~~~ilID~G~~~~~---i~~~l-~~~-~~~i~~Ii~TH~H~DH~gg~~~l~~~~-----~~~i   79 (216)
                      +..|+ .|+|+|.++++  .+|||||...+.   +++.+ ++. +.+|++|++||+|+||+||+..|.+..     ..++
T Consensus       117 vrG~dlaN~~~I~gddG--~IVIDtg~s~e~A~aale~~~~~l~~kPV~aVI~TH~H~DH~GGa~~~~e~~~~~~~~~~I  194 (658)
T 2cfu_A          117 VRGFDLANITFIRGDSG--WIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQI  194 (658)
T ss_dssp             EESSSSSCEEEEECSSS--EEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEE
T ss_pred             EECCCCCEEEEEEECCE--EEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCHHHHHCCCCCCCCCCEE
T ss_conf             97488761899993998--9999799998999999999998657998489998999701057479881354214677428


Q ss_pred             EECCHHHHHHHCCH--------HHHHHHHHC--------------------CCCCCCCCCEEEECCCCEEEEECCCCCCC
Q ss_conf             40584389884012--------344443200--------------------23466667418964783997620123310
Q gi|254780758|r   80 IGPHKDDAAMMGKV--------DEQARLLSI--------------------RMNARNASSDRWLQDGDTLLLGTHIFKVF  131 (216)
Q Consensus        80 ~~~~~~~~~~~~~~--------~~~~~~~~~--------------------~~~~~~~~~~~~l~~gd~i~lg~~~~~vi  131 (216)
                      +++...........        .+....++.                    .......++...+.+++++.+|+.+++++
T Consensus       195 iA~~~~~~~~~~e~~~~~~~~~rRa~~~~g~~lp~~~~g~~~~glg~~~~~~~~~~~~p~~~~~~~~~~l~igG~~~e~i  274 (658)
T 2cfu_A          195 IAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQ  274 (658)
T ss_dssp             EEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEE
T ss_pred             EEECCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEEEEE
T ss_conf             97344689976300110277888998876322785501044534456766686543589658741524677799899999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC---CCCCHHHHHHHHHHHH--HCCCCCEEEEECCCCCCC
Q ss_conf             1222-47210000012343211110000013566346---7989999999999998--519997899848879888
Q gi|254780758|r  132 HCPG-HSPGHVIYVNFENNFAHLGDTLFRSSIGRTDI---LHGDYQQLINSINNKI--LPLGDEISFVCGHGPNST  201 (216)
Q Consensus       132 ~tPG-Ht~g~~~~~~~~~~~lftGD~lf~~~~G~~d~---~~~d~~~~~~sl~~~l--~~l~~~~~v~PgHG~~tt  201 (216)
                      ++|| |||+++++|+|+.++||+||.++..-.-...+   +..|+..|.++|.+.+  ..+.+++ ++||||++..
T Consensus       275 ~tPG~HTp~~l~vy~Pe~kvLf~GD~v~~~~~nl~t~rg~~~rd~~~w~~~Ld~l~~l~~~~aev-l~p~Hg~Pi~  349 (658)
T 2cfu_A          275 NTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEV-MFAVHNWPRW  349 (658)
T ss_dssp             ECTTSSSSSBEEEEETTTTEEECTTTSCSSCCCSSCTTCCCCCCHHHHHHHHHHHHHHTGGGCSE-EECSSSCCEE
T ss_pred             ECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE-EECCCCCCCC
T ss_conf             76899987747999757896874366566665654556776666688999999999860557536-7448987535


No 24 
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.96  E-value=5.2e-29  Score=187.03  Aligned_cols=167  Identities=25%  Similarity=0.335  Sum_probs=130.8

Q ss_pred             CCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHC
Q ss_conf             87657169999889984999838999999999999749975299986988521011056788607955405843898840
Q gi|254780758|r   12 TPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMMG   91 (216)
Q Consensus        12 ~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~   91 (216)
                      ..++.|||++..+++.  +|||||...+..++.+++.+ ++++|++||.|  |++++..+++++++++++...+..    
T Consensus        20 ~~~~~n~~lv~~~~g~--vlIDp~~~~~~~~~~l~~~g-~v~~iv~TH~d--H~g~~~~~~~~~~a~i~~~~~~~~----   90 (201)
T 2p97_A           20 RNIDFNGFAWIRPEGN--ILIDPVALSNHDWKHLESLG-GVVWIVLTNSD--HVRSAKEIADQTYTKIAGPVAEKE----   90 (201)
T ss_dssp             TTEEEEEEEECCTTCC--EEESCCCCCHHHHHHHHHTT-CCSEEECSSGG--GCTTHHHHHHHSCCEEEEEGGGTT----
T ss_pred             CCCCEEEEEEEECCEE--EEEECCCCCHHHHHHHHHCC-CCEEEEECCHH--HHHHHHHHHHHHCCCEEECCCCCC----
T ss_conf             7523089999989985--99949988199999998569-96499988888--988999999987990993142133----


Q ss_pred             CHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHCCCCCC----C
Q ss_conf             12344443200234666674189647839976201233101222-472100000123432111100000135663----4
Q gi|254780758|r   92 KVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPG-HSPGHVIYVNFENNFAHLGDTLFRSSIGRT----D  166 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPG-Ht~g~~~~~~~~~~~lftGD~lf~~~~G~~----d  166 (216)
                                    ..+..++..+++++.+..|   ++++++|| ||||+++++. ++++||+||+++..+.|+.    +
T Consensus        91 --------------~~~~~~d~~~~dg~~~~~g---~~vi~~pG~Ht~g~v~~~~-~~~~Lf~GD~l~~~~~g~~~~~~~  152 (201)
T 2p97_A           91 --------------NFPIYCDRWLSDGDELVPG---LKVMELQGSKTPGELALLL-EETTLITGDLVRAYRAGGLEILPD  152 (201)
T ss_dssp             --------------SCSSCCSEEECTTCBSSTT---EEEEEECSSSSTTEEEEEE-TTTEEEECSSEEBSSTTSCEECCG
T ss_pred             --------------CCCCCCCEEECCCCEEEEE---EEEEEECCCCCCCCCCEEE-CCCEEEECCEECCCCCCCCCCCCC
T ss_conf             --------------3567898884268886501---7999947888999843330-356399898815789997215787


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHH
Q ss_conf             6798999999999999851999789984887988-889998
Q gi|254780758|r  167 ILHGDYQQLINSINNKILPLGDEISFVCGHGPNS-TIGRER  206 (216)
Q Consensus       167 ~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~t-t~~~e~  206 (216)
                      +..+|..++++|+ ++|+++.+..+|+||||++- .-+.|+
T Consensus       153 ~~~~d~~~~~~sl-~~l~~l~~~~~i~pgHG~pi~~~~~~~  192 (201)
T 2p97_A          153 EKLMNKQKVVASV-RRLAALEKVEAVLVGDGWSVFRDGRDR  192 (201)
T ss_dssp             GGCSCHHHHHHHH-HHHHTCTTCCEEEESBBCCBCSCHHHH
T ss_pred             CCCCCHHHHHHHH-HHHHCCCCCCEEECCCCCHHHCCHHHH
T ss_conf             6677999999999-999617999699958997320699999


No 25 
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.96  E-value=1.2e-28  Score=185.05  Aligned_cols=170  Identities=16%  Similarity=0.115  Sum_probs=122.1

Q ss_pred             CCCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC-C-CCEEEEEECCCCCCCCCCCHHHHHHHC-CCEEECCHHHHHH
Q ss_conf             57169999889984999838999--99999999974-9-975299986988521011056788607-9554058438988
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR-N-FHVKQIWITHGHVDHVGGAAQLKEDLS-LTIIGPHKDDAAM   89 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~-~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~-~~i~~~~~~~~~~   89 (216)
                      .-|||||.++   +.+|||||..  .+.+++.+++. + .+|++|++||.|+||+||++.|.++++ ++++++..... .
T Consensus        40 s~NsYLI~~e---~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~~~~p~a~i~~~~~~~~-~  115 (414)
T 2q9u_A           40 SYNSYFIDDE---CPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQE-H  115 (414)
T ss_dssp             EECCEEECSS---SCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHH-H
T ss_pred             EEEEEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHH-H
T ss_conf             7999999669---88999099801699999999975698779989969096647602999998788987997589998-8


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCCCC
Q ss_conf             401234444320023466667418964783997620123310122-247210000012343211110000013-566346
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSS-IGRTDI  167 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~-~G~~d~  167 (216)
                      +...      +     .......+.+++++++.+|+.+++++++| |||+|++++|.+++++||+||++.... .+....
T Consensus       116 ~~~~------~-----~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~~~~~~~~~~~~~  184 (414)
T 2q9u_A          116 LKIL------Y-----GMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWA  184 (414)
T ss_dssp             HHHH------H-----CCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBG
T ss_pred             HHHH------C-----CCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCC
T ss_conf             8874------3-----8986525871589889756558999703689868978999989896894574566788876765


Q ss_pred             CC-------------------CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             79-------------------89999999999998519997899848879888
Q gi|254780758|r  168 LH-------------------GDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       168 ~~-------------------~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      ..                   ....++.++| ++|..|+.++ |+|||||...
T Consensus       185 ~~~~~~~~~~~~~~y~~~~~~p~~~~~~~~L-ekl~~Ldi~~-I~PgHGpi~r  235 (414)
T 2q9u_A          185 DECDVSHVMHLFKEYTANILGLFSAQMRKAL-EVASTVEIKY-ILSAHGVSWR  235 (414)
T ss_dssp             GGSCHHHHHHHHHHHHHHHTTTCHHHHHHHH-HHHHTSCCSE-EEESSSCBEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHCCCCCE-EEECCCCEEC
T ss_conf             3234266799999998773022399999999-9975789789-9808967244


No 26 
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A*
Probab=99.96  E-value=3.2e-28  Score=182.48  Aligned_cols=172  Identities=17%  Similarity=0.175  Sum_probs=117.9

Q ss_pred             CCCEEEEEECCCCEEEEECCCCC--HHHHHHHHHH----CC-CCEEEEEECCCCCCCCCCCHHHHHHHCC-CEEECCHHH
Q ss_conf             57169999889984999838999--9999999997----49-9752999869885210110567886079-554058438
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQS----RN-FHVKQIWITHGHVDHVGGAAQLKEDLSL-TIIGPHKDD   86 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~----~~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~~-~i~~~~~~~   86 (216)
                      ..|||+|.+++  .++|||||..  .+.+++.+++    .+ .+|++|++||.|+||+||++.+.++++. ++++++...
T Consensus        34 s~NsYlI~~~~--~~~LIDtG~~~~~~~~~~~l~~~~~~i~~~~I~~Ii~TH~H~DH~ggl~~~~~~~~~~~~~~~~~~~  111 (404)
T 2ohh_A           34 TYNAYLVCGDE--GVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAV  111 (404)
T ss_dssp             EECCEEEECSS--CEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHH
T ss_pred             EEEEEEEECCC--EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECHHHH
T ss_conf             58999997198--2599919898438999999999986479656869998999987541199999877998899678888


Q ss_pred             HHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCCC--C
Q ss_conf             988401234444320023466667418964783997620123310122-2472100000123432111100000135--6
Q gi|254780758|r   87 AAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSSI--G  163 (216)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~~--G  163 (216)
                      ..+...           ...........+.+|+++.+|+.+++++++| ||++|++++|+++.++||+||++....+  +
T Consensus       112 ~~l~~~-----------~~~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~~~~~~~iLfsgD~~g~~~~~~~  180 (404)
T 2ohh_A          112 KGLLKH-----------YPSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLDEDGILFSNDAFGQHLCCPQ  180 (404)
T ss_dssp             HHHHHH-----------CGGGGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEETTTEEECTTTTCCCCCCSC
T ss_pred             HHHHHH-----------CCCCCCHHHEECCCCCEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCC
T ss_conf             777752-----------677762331322579889737615899952688989968999889999997976666778864


Q ss_pred             CCCCCCC------------------CHHHHHHHHHHHHHCCC----CCEEEEECCCCCCC
Q ss_conf             6346798------------------99999999999985199----97899848879888
Q gi|254780758|r  164 RTDILHG------------------DYQQLINSINNKILPLG----DEISFVCGHGPNST  201 (216)
Q Consensus       164 ~~d~~~~------------------d~~~~~~sl~~~l~~l~----~~~~v~PgHG~~tt  201 (216)
                      ..+...+                  ...++++++ ++|..|.    .+ .|+|||||.-+
T Consensus       181 ~~~~~~~~~~~~~~~~~yy~~i~~p~~~~~~~~l-~~l~~L~~~~~i~-~I~PgHGpv~~  238 (404)
T 2ohh_A          181 RLDREIPEYILMDAARKFYANLITPLSKLVLKKF-DEVKELGLLERIQ-MIAPSHGQIWT  238 (404)
T ss_dssp             CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHH-HHHHHTTCGGGCS-EEECSSSCBBS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH-HHHHHCCCCCCCC-EEECCCCHHHC
T ss_conf             1014456302377775436450267689999999-9998664667863-99627702756


No 27 
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.95  E-value=4e-28  Score=181.92  Aligned_cols=172  Identities=13%  Similarity=0.133  Sum_probs=119.8

Q ss_pred             CCCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf             57169999889984999838999--99999999974--997529998698852101105678860795540584389884
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR--NFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM   90 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~--~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~   90 (216)
                      ..|||||.++   +.+|||||..  .+.+++.|++.  ..+|++|++||.|+||+||++.|.++++...+..++.....+
T Consensus        35 ~~NsYlI~~~---~~vLIDtg~~~~~~~~~~~l~~~~~~~~I~~Ii~TH~H~DH~Gg~~~l~~~~p~~~v~~~~~~~~~~  111 (398)
T 1ycg_A           35 TYNAYLIVDD---KTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSL  111 (398)
T ss_dssp             EECCEEECSS---SCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHH
T ss_pred             EEEEEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHH
T ss_conf             7999999729---9999949984679999999997559768659992789867770599999868999899689999877


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC---
Q ss_conf             01234444320023466667418964783997620123310122-24721000001234321111000001356634---
Q gi|254780758|r   91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSSIGRTD---  166 (216)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d---  166 (216)
                      ...           ..........+.+++++.+|+..++++++| ||+|+++++|.++.++||+||+.....+....   
T Consensus       112 ~~~-----------~~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~~h~~~~~~~~~~~~~iLfsgD~~~~~~~~~~~~~d  180 (398)
T 1ycg_A          112 KAH-----------YSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDD  180 (398)
T ss_dssp             HHH-----------TCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGG
T ss_pred             HHH-----------CCCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCC
T ss_conf             640-----------246775506825998898168159999789888888579998898889918846767788653031


Q ss_pred             -----------------CCCCCHHHHHHHHHHHHHCCCCCE-EEEECCCCCCC
Q ss_conf             -----------------679899999999999985199978-99848879888
Q gi|254780758|r  167 -----------------ILHGDYQQLINSINNKILPLGDEI-SFVCGHGPNST  201 (216)
Q Consensus       167 -----------------~~~~d~~~~~~sl~~~l~~l~~~~-~v~PgHG~~tt  201 (216)
                                       ....+..++.++| +++..|+.+. .|+|||||...
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~l~~L~l~i~~I~PgHGpv~~  232 (398)
T 1ycg_A          181 QVDAGLIMDEAAKYYANILMPFSNLITKKL-DEIQKINLAIKTIAPSHGIIWR  232 (398)
T ss_dssp             GSCHHHHHHHHHHHHHHHTGGGHHHHHHHH-HHHHHTTCCCSEEEESSSCBBC
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHHHHCCCCCCEEEECCCCHHH
T ss_conf             122145689875312100368789999999-9998659982499708986320


No 28 
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.95  E-value=7e-28  Score=180.48  Aligned_cols=176  Identities=18%  Similarity=0.157  Sum_probs=121.6

Q ss_pred             CCCC--CEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC-C-CCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHH
Q ss_conf             7657--169999889984999838999--99999999974-9-9752999869885210110567886079554058438
Q gi|254780758|r   13 PFKQ--NCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR-N-FHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDD   86 (216)
Q Consensus        13 ~~~~--N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~-~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~   86 (216)
                      |.++  |||||.++   +++|||||..  .+.+++.+++. + .+|++|++||.|+||+||++.|.++++...++.++..
T Consensus        30 ~~G~s~N~YlI~~e---~~vLIDtg~~~~~~~~~~~l~~~i~~~~I~~II~TH~H~DHiggl~~l~~~~~~~~v~~~~~~  106 (402)
T 1e5d_A           30 PMGTTYNAYLVEDE---KTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLG  106 (402)
T ss_dssp             TTCEEEEEEEECSS---SCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHH
T ss_pred             CCCEEEEEEEEECC---CEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHH
T ss_conf             99628999999769---999995998246999999999756987888899399966788679999997799989975778


Q ss_pred             HHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf             988401234444320023466667418964783997620123310122-2472100000123432111100000135663
Q gi|254780758|r   87 AAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSSIGRT  165 (216)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~~G~~  165 (216)
                      ...+...           ......+...+.+|+++.+|+.+++++++| +|+++++++|.++.+++|+||.+....+...
T Consensus       107 ~~~~~~~-----------~~~~~~~~~~~~~g~~l~~g~~~l~~i~~p~~h~~~~~~~~~~~~~ilfsgD~~~~~~~~~~  175 (402)
T 1e5d_A          107 QKAMESH-----------FHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDIFGQNIAASE  175 (402)
T ss_dssp             HHHHHHH-----------HCCSSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSC
T ss_pred             HHHHHHC-----------CCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCC
T ss_conf             8887731-----------46766432002586389848936899967777778966999868880770454567778876


Q ss_pred             ---C-----------------CCCCCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHH
Q ss_conf             ---4-----------------679899999999999985--19997899848879888899
Q gi|254780758|r  166 ---D-----------------ILHGDYQQLINSINNKIL--PLGDEISFVCGHGPNSTIGR  204 (216)
Q Consensus       166 ---d-----------------~~~~d~~~~~~sl~~~l~--~l~~~~~v~PgHG~~tt~~~  204 (216)
                         +                 +...+..++.++| +++.  .++.++ |+|||||...-.+
T Consensus       176 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~L-~~l~~l~l~~~~-I~PgHGpv~~~~~  234 (402)
T 1e5d_A          176 RFSDQIPVHTLERAMREYYANIVNPYAPQTLKAI-ETLVGAGVAPEF-ICPDHGVIFRGAD  234 (402)
T ss_dssp             CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHH-HHHHHTTCCCSE-EEESSSCBEESHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHCCCCCCE-EEECCCCEECCHH
T ss_conf             2234454456899987656540576399999999-999866998138-9636843015837


No 29 
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=99.95  E-value=6.5e-27  Score=174.88  Aligned_cols=165  Identities=15%  Similarity=0.181  Sum_probs=117.0

Q ss_pred             CCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC-C-CCEEEEEECCCCCCCCCCCHHHHHHHC--CCEEECCHHHHHH
Q ss_conf             7169999889984999838999--99999999974-9-975299986988521011056788607--9554058438988
Q gi|254780758|r   16 QNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR-N-FHVKQIWITHGHVDHVGGAAQLKEDLS--LTIIGPHKDDAAM   89 (216)
Q Consensus        16 ~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~-~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~--~~i~~~~~~~~~~   89 (216)
                      -|||||.+++  +++|||||..  .+.+++.+++. + .+|++|++||.|+||+||++.|+++++  ++++++ +....+
T Consensus        52 ~NsYLI~~~~--~~vLIDtg~~~~~~~~l~~l~~~i~~~~I~yIi~TH~H~DH~Ggl~~l~~~~~~~~~i~~~-~~~~~~  128 (410)
T 1vme_A           52 YNAYLVKLNG--ANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIAS-NFGKRL  128 (410)
T ss_dssp             EEEEEEECSS--CEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEEC-HHHHHH
T ss_pred             EEEEEEEECC--EEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC-HHHHHH
T ss_conf             9999999799--5799919975679999999997579767689994939653775499999970999899978-888642


Q ss_pred             HCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf             4012344443200234666674189647839976201233101222-472100000123432111100000135663467
Q gi|254780758|r   90 MGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPG-HSPGHVIYVNFENNFAHLGDTLFRSSIGRTDIL  168 (216)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPG-Ht~g~~~~~~~~~~~lftGD~lf~~~~G~~d~~  168 (216)
                      +...      +       .......+++|+++++|+.+++++++|| |+|+++++|.  .+++|+||++....++.. +.
T Consensus       129 ~~~~------~-------~~~~~~~v~~g~~l~lG~~~l~~i~~P~~H~p~~~~~y~--~~iLFsgD~~g~~~~~~~-~~  192 (410)
T 1vme_A          129 LEGF------Y-------GIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDVGGGYLLPEI-LD  192 (410)
T ss_dssp             HHHH------H-------CCCCCEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETTTCCSSCCSS-SB
T ss_pred             HHHC------C-------CCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCEEE--CCEEEECCCCCCCCCCCC-CC
T ss_conf             0101------6-------765316835799998667269999789988899710212--898998863435677873-24


Q ss_pred             CCC----------------------HHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             989----------------------999999999998519997899848879888
Q gi|254780758|r  169 HGD----------------------YQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       169 ~~d----------------------~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      ..+                      ..++.++| +++..|+.++ |+|||||.-.
T Consensus       193 d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L-~ki~~L~i~~-I~PgHGpiir  245 (410)
T 1vme_A          193 DSNESVVERYLPHVTKYIVTVIGHYKNYILEGA-EKLSSLKIKA-LLPGHGLIWK  245 (410)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHH-HHHHTSCCSE-EEESSSCBBS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHCCCCCE-EECCCCHHHH
T ss_conf             764025678899999998875063289999999-9986599889-9608806776


No 30 
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.95  E-value=5.4e-28  Score=181.15  Aligned_cols=180  Identities=17%  Similarity=0.177  Sum_probs=113.3

Q ss_pred             CCCEEEEEECCCCEEEEECCCCCH----------------HHHHHHHHHCCCC---EEEEEECCCCCCCCCCCHHHHH--
Q ss_conf             571699998899849998389999----------------9999999974997---5299986988521011056788--
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGDL----------------DIIKDVIQSRNFH---VKQIWITHGHVDHVGGAAQLKE--   73 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~~----------------~~i~~~l~~~~~~---i~~Ii~TH~H~DH~gg~~~l~~--   73 (216)
                      .+|||||..++  ..+|||+|...                ..+++.|++.|++   |++|++||.|.||+||+.....  
T Consensus        47 ~~~~~LI~~~~--~~iLiDtG~g~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dId~VilTH~H~DH~Ggl~~~~~~~  124 (280)
T 3esh_A           47 PTHPILIQTAQ--YNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHA  124 (280)
T ss_dssp             ECCCEEEECSS--CEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCC
T ss_pred             EEEEEEEEECC--EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCHHHCCCCC
T ss_conf             78899999299--0599962899622355323335776310699999984999799989976789665458800024751


Q ss_pred             HHCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCC-EEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf             60795540584389884012344443200234666674-18964783997620123310122247210000012--3432
Q gi|254780758|r   74 DLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASS-DRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNF--ENNF  150 (216)
Q Consensus        74 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~--~~~~  150 (216)
                      .++...++.++........................... ...++++..+ ..+  +++++||||||||++++++  ++++
T Consensus       125 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g--i~vi~tPGHTpGh~~~~v~~~~~~v  201 (280)
T 3esh_A          125 IFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEP-VPG--IKMQHSGGHSFGHTIITIESQGDKA  201 (280)
T ss_dssp             SSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEECS-STT--EEEEECCSSSTTCEEEEEEETTEEE
T ss_pred             CCCCCEEEECHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEECCCCEEE-CCC--CEEEECCCCCCCCEEEEEEECCCEE
T ss_conf             5787689950146422028231220232112344333523531488076-488--6798559989888899999599179


Q ss_pred             CCCCCHHHHCCCCCCCCC---CCCHHHHHHHHHHHHHC--CCCCEEEEECCCCCC
Q ss_conf             111100000135663467---98999999999999851--999789984887988
Q gi|254780758|r  151 AHLGDTLFRSSIGRTDIL---HGDYQQLINSINNKILP--LGDEISFVCGHGPNS  200 (216)
Q Consensus       151 lftGD~lf~~~~G~~d~~---~~d~~~~~~sl~~~l~~--l~~~~~v~PgHG~~t  200 (216)
                      +|+||+++..+..++++.   ..|+.+.++|.+ +++.  ...+++|+|||+|..
T Consensus       202 lf~GD~~~~~~~~~p~~~~~~d~d~~~a~~s~~-~ll~~~~~~~~~v~~~H~~~~  255 (280)
T 3esh_A          202 VHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKE-RMIPYFIQQQYWFLFYHDENY  255 (280)
T ss_dssp             EECGGGSCSGGGCSTTCCCTTCSCHHHHHHHHH-HHHHHHHHTTCEEECSSCSSE
T ss_pred             EEEEECCCHHHCCCCCCEECCCCCHHHHHHHHH-HHHHHHHHCCCEEEEECCCCC
T ss_conf             999824341102698835546689999999999-999999748989999789986


No 31 
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=99.94  E-value=1.5e-26  Score=172.77  Aligned_cols=169  Identities=14%  Similarity=0.129  Sum_probs=115.5

Q ss_pred             CCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHC
Q ss_conf             7169999889984999838999--999999999749--975299986988521011056788607955405843898840
Q gi|254780758|r   16 QNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSRN--FHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMMG   91 (216)
Q Consensus        16 ~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~~--~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~   91 (216)
                      .|||||.+   .+.+|||||..  .+.+++.+++..  .+|++|++||.|.||+||++.+++.++...++.+......+.
T Consensus        43 ~N~YlI~~---d~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~~~p~~~v~~~~~~~~~l~  119 (262)
T 3hnn_A           43 SNSYVIEG---DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR  119 (262)
T ss_dssp             EEEEEEES---SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred             EEEEEEEC---CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             89999932---999999189755799999999963784258899959977777622599997444857997789998887


Q ss_pred             CHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE-CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC-CCCC
Q ss_conf             123444432002346666741896478399762-012331012-2247210000012343211110000013566-3467
Q gi|254780758|r   92 KVDEQARLLSIRMNARNASSDRWLQDGDTLLLG-THIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGR-TDIL  168 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg-~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~-~d~~  168 (216)
                      ..      +     .........+.+++.+.++ +..++++.+ |||++|++++|.+++++||+||.+....++. +...
T Consensus       120 ~~------~-----~~~~~~~~~~~~gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~~~  188 (262)
T 3hnn_A          120 AA------F-----PDDNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDD  188 (262)
T ss_dssp             HH------S-----SSSCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCEES
T ss_pred             HH------H-----CCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             65------2-----356643220025514762278237999668999899629998788869966634567788655067


Q ss_pred             -----------------CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             -----------------98999999999999851999789984887988
Q gi|254780758|r  169 -----------------HGDYQQLINSINNKILPLGDEISFVCGHGPNS  200 (216)
Q Consensus       169 -----------------~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~t  200 (216)
                                       ..+..++.+|| +++.+|+.++ |+|||||..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~sL-~~l~~L~~~~-I~PgHGpvi  235 (262)
T 3hnn_A          189 NWESFKEDQRYYFNCLMAPHAIHVEAAL-EKISDLQVRL-YAVGHGPLV  235 (262)
T ss_dssp             CGGGTHHHHHHHHHHHTGGGHHHHHHHH-HHHTTSCCSE-EEESSSSEE
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHCCCCCE-EECCCCCHH
T ss_conf             7167899999999985052499999999-9987899899-995798245


No 32 
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching, alternative binding site, product complex; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovarkurstaki} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.94  E-value=5.1e-27  Score=175.48  Aligned_cols=183  Identities=19%  Similarity=0.257  Sum_probs=117.7

Q ss_pred             CCCCEEEEEECCCC-------------------CCCEEEEEECCCCEEEEECCCCCH-----------------------
Q ss_conf             97735999970876-------------------571699998899849998389999-----------------------
Q gi|254780758|r    1 MSKLSFHIVQVTPF-------------------KQNCTFLFDEESLEAVVVDPGGDL-----------------------   38 (216)
Q Consensus         1 m~~~~~~~i~v~~~-------------------~~N~~li~~~~~~~~ilID~G~~~-----------------------   38 (216)
                      |...+++.++.|.+                   -.+||||..++  ..+|||+|...                       
T Consensus         5 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~pv~~~LI~~~~--g~iLiDtG~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (254)
T 3dha_A            5 MTVKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLETEE--GPILVDTGMPESAVNNEGLFNGTFVEGQILPKMT   82 (254)
T ss_dssp             CCBSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEETT--EEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBC
T ss_pred             CCEEEEEEECCCEEEECHHHCCCCCCCCCEEEEEEEEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             34148999538659988688056799996698634899999899--5199959889553223311254211123565656


Q ss_pred             --HHHHHHHHHCCCC---EEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             --9999999974997---52999869885210110567886079554058438988401234444320023466667418
Q gi|254780758|r   39 --DIIKDVIQSRNFH---VKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDR  113 (216)
Q Consensus        39 --~~i~~~l~~~~~~---i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (216)
                        +.+.+.|++.|++   |++|++||.|.||+||+..|.   ++++++.+.+-..+.......      .....+.....
T Consensus        83 ~~~~l~~~L~~~G~~p~dI~~Vi~TH~H~DH~Gg~~~f~---~A~i~~~~~e~~~~~~~~~~~------~~~~~~~~~~~  153 (254)
T 3dha_A           83 EEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFT---NTPIIVQRTEYEAALHREEYM------KECILPHLNYK  153 (254)
T ss_dssp             GGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGCS---SSCEEEEHHHHHHHHHCTTSC------GGGSCTTSCEE
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEECCCCHHHCCCCCCCC---CCCCCCCHHHHHHHHCCCHHH------HHCCCCCCCEE
T ss_conf             066899999984999799969990799721027531135---642003888999874721110------11047655538


Q ss_pred             EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHCCC-
Q ss_conf             964783997620123310122247210000012---3432111100000135--6634679899999999999985199-
Q gi|254780758|r  114 WLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNF---ENNFAHLGDTLFRSSI--GRTDILHGDYQQLINSINNKILPLG-  187 (216)
Q Consensus       114 ~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~---~~~~lftGD~lf~~~~--G~~d~~~~d~~~~~~sl~~~l~~l~-  187 (216)
                      .++ ++.-.+++  ++++++||||+||++++++   +.++||+||+++....  .....+..|..++++|+ ++++.+. 
T Consensus       154 ~~~-~~~~~~~g--i~v~~tpGHT~G~~~~~v~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~d~~~~~~sl-~~l~~l~~  229 (254)
T 3dha_A          154 IIE-GDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKENFEDEVPFAGFDPELALSSI-KRLKEVVK  229 (254)
T ss_dssp             EEC-SSEEEETT--EEEEECCSSSTTCEEEEEEETTTEEEEEEETTCSSHHHHHSCCCCSCSCHHHHHHHH-HHHHHHHH
T ss_pred             EEE-CCEEECCC--EEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHC
T ss_conf             960-75376187--498245899942389999828998899996778852226789986788999999999-99985502


Q ss_pred             -CCEEEEECCCC
Q ss_conf             -97899848879
Q gi|254780758|r  188 -DEISFVCGHGP  198 (216)
Q Consensus       188 -~~~~v~PgHG~  198 (216)
                       ...+|+|||.|
T Consensus       230 ~~~~~i~pgHd~  241 (254)
T 3dha_A          230 KEKPIIFFGHDI  241 (254)
T ss_dssp             HHCCEEEESSCH
T ss_pred             CCCCEEEECCCH
T ss_conf             799799958883


No 33 
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center, quorum quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.92  E-value=9.2e-26  Score=168.20  Aligned_cols=191  Identities=14%  Similarity=0.163  Sum_probs=111.1

Q ss_pred             CCEEEEEECCCCEEEEECCCCCH------------------------HHHHHHHHHCCCC---EEEEEECCCCCCCCCCC
Q ss_conf             71699998899849998389999------------------------9999999974997---52999869885210110
Q gi|254780758|r   16 QNCTFLFDEESLEAVVVDPGGDL------------------------DIIKDVIQSRNFH---VKQIWITHGHVDHVGGA   68 (216)
Q Consensus        16 ~N~~li~~~~~~~~ilID~G~~~------------------------~~i~~~l~~~~~~---i~~Ii~TH~H~DH~gg~   68 (216)
                      .|||||..+++  .+|||||...                        +.+.+.|++.|++   |++|++||.|+||+||+
T Consensus        43 v~~~LI~~~~g--~iLvDtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dI~~VilTH~H~DH~Ggl  120 (276)
T 2r2d_A           43 VSAYLIQCTDA--TVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCV  120 (276)
T ss_dssp             EEEEEEECSSC--EEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTG
T ss_pred             EEEEEEEECCE--EEEEECCCCHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCC
T ss_conf             58999994990--4999578884551243334302221155456532029999998399979998998479960423741


Q ss_pred             HHHHHHHCCCEEECCHHHHHHHCCHHHHH--H-HH--HCCC-CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             56788607955405843898840123444--4-32--0023-46666741896478399762012331012224721000
Q gi|254780758|r   69 AQLKEDLSLTIIGPHKDDAAMMGKVDEQA--R-LL--SIRM-NARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVI  142 (216)
Q Consensus        69 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~-~~--~~~~-~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~  142 (216)
                      +.|.   +++++++..+-...........  . ..  .... ............+.....+++-...++.+|||||||++
T Consensus       121 ~~f~---~a~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~pGHTpGh~~  197 (276)
T 2r2d_A          121 EYFG---KSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLG  197 (276)
T ss_dssp             GGCS---SSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEESSSSSSEEE
T ss_pred             CCCC---CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCEEEECCEEEEECCCCCCCCCEE
T ss_conf             3578---6300038999998640123443345300455433104444565551268825970997886688998710689


Q ss_pred             CCCC---CCCCCCCCCHHHHC-CCCCCC---CCCCCHHHHHHHHHHHHHCCC--CCEEEEECCCCCCCHHHHHHHCHHH
Q ss_conf             0012---34321111000001-356634---679899999999999985199--9789984887988889998828145
Q gi|254780758|r  143 YVNF---ENNFAHLGDTLFRS-SIGRTD---ILHGDYQQLINSINNKILPLG--DEISFVCGHGPNSTIGRERRLNPFL  212 (216)
Q Consensus       143 ~~~~---~~~~lftGD~lf~~-~~G~~d---~~~~d~~~~~~sl~~~l~~l~--~~~~v~PgHG~~tt~~~e~~~n~~~  212 (216)
                      +++.   +.+++|+||+++.. ++.+..   ....|..++.+|++ +++.+.  ....|+|||+|..--..+|..+.|+
T Consensus       198 ~~v~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~-~l~~l~~~~~~~vipgHd~~~~~~~~k~~~~~y  275 (276)
T 2r2d_A          198 LAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVS-HIRQYAESRSLTVLFGHDREQFASLIKSTDGFY  275 (276)
T ss_dssp             EEEECSSSCEEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHH-HHHHHHHHTTCEEEESSCHHHHHHSCCTTTCCB
T ss_pred             EEEEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCC
T ss_conf             999957999799995864617552898887766689999999999-999663358988993849899878861567777


No 34 
>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.92  E-value=2e-25  Score=166.17  Aligned_cols=187  Identities=17%  Similarity=0.214  Sum_probs=117.2

Q ss_pred             CCCEEEEEECCCC-------C---CCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCC
Q ss_conf             7735999970876-------5---716999988998499983899--99999999997499---7529998698852101
Q gi|254780758|r    2 SKLSFHIVQVTPF-------K---QNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVG   66 (216)
Q Consensus         2 ~~~~~~~i~v~~~-------~---~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~g   66 (216)
                      .-|+++++..|..       .   +||++|..++  +.+|||||.  ..+.+++.|++.++   +|++|++||.|+||+|
T Consensus        11 ~~m~~~~~~~g~~~~~~~~~~~~~~~~~li~~~~--~~iLIDtG~~~~~~~l~~~l~~~g~~~~~I~~Ii~TH~H~DH~g   88 (221)
T 1ztc_A           11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEHKD--RRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIF   88 (221)
T ss_dssp             CCEEEEEEECCBEEEETTTEECCBCCEEEEEETT--EEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHG
T ss_pred             CEEEEEEEECCCCEECCCCCCCCCEEEEEEEECC--EEEEEECCCCCCHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCC
T ss_conf             5369899981897545886678823799999899--99999199972199999999984999689849995998724445


Q ss_pred             CCHHHHHHHCCCEEECCHHHHH-HHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1056788607955405843898-840123444432002346666741896478399762012331012224721000001
Q gi|254780758|r   67 GAAQLKEDLSLTIIGPHKDDAA-MMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVN  145 (216)
Q Consensus        67 g~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~  145 (216)
                      |+..+.+.   .++........ ..............   .........+.+++. .+++..++++.+||||++|+++++
T Consensus        89 g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gHt~~~~~~~~  161 (221)
T 1ztc_A           89 NSVLFENA---TFYVHEVYKTKNYLSFGTIVGRIYSK---VISSWKNVVLLKGEE-SLFDEKVKVFHTPWHAREHLSFLL  161 (221)
T ss_dssp             GGGGCTTC---EEEEEGGGGGSCGGGGCHHHHHHHHH---HHHTCCSEEEECSCC-EETTTTEEEEECCSSSTTCEEEEE
T ss_pred             CHHHCCCC---CEEEEECHHHHHCCCCCCCCCCCCCC---CCCCCCEEEEECCCE-EEECEEEEECCCCCCCHHHEEEEE
T ss_conf             41210465---05541000222101222211001223---455542289706843-760205772478998834776899


Q ss_pred             CCC---CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             234---32111100000135663467989999999999998519997899848879888
Q gi|254780758|r  146 FEN---NFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNST  201 (216)
Q Consensus       146 ~~~---~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt  201 (216)
                      +.+   ++||+||+++.........+..+...+.++| +++..+  + .++||||++-.
T Consensus       162 ~~~~~~~iLf~GD~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~~--d-~ivpgH~~p~~  216 (221)
T 1ztc_A          162 DTENAGRVLITGDITPNRLSYYDIIKGYGSVQVKNFL-DRVGRI--D-LLVFPHDAPLK  216 (221)
T ss_dssp             EETTTEEEEECGGGSCSHHHHHHHHHTCSCHHHHHHH-HHHCCC--S-EEECSSSCCBC
T ss_pred             ECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCC--C-EEEECCCCCCC
T ss_conf             5589963999756789876774579987899999999-876449--9-99919897655


No 35 
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.92  E-value=6e-26  Score=169.28  Aligned_cols=184  Identities=19%  Similarity=0.273  Sum_probs=112.2

Q ss_pred             CCCEEEEEECCCCEEEEECCCCC------HHHHHHHHHHCCCC---EEEEEECCCCCCCCCCCHHHHHH-HCCCEEECCH
Q ss_conf             57169999889984999838999------99999999974997---52999869885210110567886-0795540584
Q gi|254780758|r   15 KQNCTFLFDEESLEAVVVDPGGD------LDIIKDVIQSRNFH---VKQIWITHGHVDHVGGAAQLKED-LSLTIIGPHK   84 (216)
Q Consensus        15 ~~N~~li~~~~~~~~ilID~G~~------~~~i~~~l~~~~~~---i~~Ii~TH~H~DH~gg~~~l~~~-~~~~i~~~~~   84 (216)
                      ..|||+|.++  ++.+|||+|..      ...+.+.|++.|++   |++|++||.|.||+||+..+.+. ++...+..+.
T Consensus        96 ~~n~~LI~~g--~~~iLIDtG~g~~~~~~~~~l~~~L~~~Gi~p~dId~VvlTH~H~DHiGGl~~~~~~~fp~a~~~~~~  173 (331)
T 1p9e_A           96 SVTGYLVNTG--SKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQ  173 (331)
T ss_dssp             EEEEEEEECS--SCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBH
T ss_pred             EEEEEEEEEC--CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHCCHHHHHHHHCCCCEEECCH
T ss_conf             1699999989--98899989998566611889999999849998999799959797010141335566407872343146


Q ss_pred             HHHHHHCCHHHHHHHHH---------CCCCCCCC---CCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf             38988401234444320---------02346666---7418964783997620123310122247210000012--3432
Q gi|254780758|r   85 DDAAMMGKVDEQARLLS---------IRMNARNA---SSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNF--ENNF  150 (216)
Q Consensus        85 ~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~--~~~~  150 (216)
                      .+...+...........         ......+.   .....+.+.+++. .+  ++++++|||||||++|++.  ++++
T Consensus       174 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ei~-~G--i~vi~tpGHTpGh~~~~i~~~~~~~  250 (331)
T 1p9e_A          174 KEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PG--IKALASHGHTPGHTTYVVESQGQKL  250 (331)
T ss_dssp             HHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TT--EEEEECTTSSTTCEEEEEEETTEEE
T ss_pred             HHHHHHHCCHHHHCCCCCHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEC-CC--EEEEECCCCCCCCEEEEEECCCEEE
T ss_conf             77998742200101542000011445444123200046378505740205-86--4898558999876799996199089


Q ss_pred             CCCCCHHHHCC--CCCCCCC---CCCHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCHHH
Q ss_conf             11110000013--5663467---989999999999998519--997899848879888899
Q gi|254780758|r  151 AHLGDTLFRSS--IGRTDIL---HGDYQQLINSINNKILPL--GDEISFVCGHGPNSTIGR  204 (216)
Q Consensus       151 lftGD~lf~~~--~G~~d~~---~~d~~~~~~sl~~~l~~l--~~~~~v~PgHG~~tt~~~  204 (216)
                      +|+||+++...  +.++++.   +.|+.+..+|- ++++..  .++++|+|+|+|...+|+
T Consensus       251 lf~GD~i~~~~~~~~~p~~~~~~D~D~~~a~~tR-~~ll~~~a~~~~lv~~~H~p~p~~g~  310 (331)
T 1p9e_A          251 ALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVER-KKAFADAAKGGYLIAASHLSFPGIGH  310 (331)
T ss_dssp             EECTTSCCCHHHHTTCTTCCBTTCSSHHHHHHHH-HHHHHHHHHHTCEEECTTSSTTCEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHCCCCEEEEECCCCCCEEE
T ss_conf             9993734467533379986025776999999999-99999860499299997899982189


No 36 
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A*
Probab=99.79  E-value=3e-19  Score=130.32  Aligned_cols=146  Identities=22%  Similarity=0.298  Sum_probs=104.3

Q ss_pred             EEEEEECCCCC---CCEEEEEECCCCEEEEECCCCC---HH-----HH---HHHHHHCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf             59999708765---7169999889984999838999---99-----99---99999749975299986988521011056
Q gi|254780758|r    5 SFHIVQVTPFK---QNCTFLFDEESLEAVVVDPGGD---LD-----II---KDVIQSRNFHVKQIWITHGHVDHVGGAAQ   70 (216)
Q Consensus         5 ~~~~i~v~~~~---~N~~li~~~~~~~~ilID~G~~---~~-----~i---~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~   70 (216)
                      +++++|+|..+   -|||++..++  +.+|||||..   .+     .+   ..+++++..++++|++||+|.||+|++++
T Consensus        16 ~i~i~pLGG~~EIG~n~~~~e~~~--~~iliD~G~~f~~~~~~gid~iiPd~~~l~~~~~~i~ai~lTHaH~DH~Galp~   93 (562)
T 3bk2_A           16 HVEIIPLGGMGEIGKNITVFRFRD--EIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPF   93 (562)
T ss_dssp             CEEEEEEESBSBSSCCEEEEEETT--EEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHH
T ss_pred             EEEEEECCCCCHHHHCEEEEEECC--EEEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEECCCCHHHHCCHHH
T ss_conf             289996688890451679999999--599995899989756889758936968987376672599979985565377287


Q ss_pred             HHHH-----HCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEC-CCCCCCCCCCCCCCCCCCC
Q ss_conf             7886-----079554058438988401234444320023466667418964783997620-1233101222472100000
Q gi|254780758|r   71 LKED-----LSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGT-HIFKVFHCPGHSPGHVIYV  144 (216)
Q Consensus        71 l~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~-~~~~vi~tPGHt~g~~~~~  144 (216)
                      |...     +.+|+|+++.+...+.....+.    .  . .........+..++.+.+|+ .+++++++.+|.||+++++
T Consensus        94 Ll~~~~~~~~~~PIY~T~~T~~Ll~~kl~e~----~--~-~~~~~~~~~i~~~~~~~~g~~f~v~~~~v~hsipga~~~~  166 (562)
T 3bk2_A           94 LLPMIFGKESPVPIYGARLTLGLLRGKLEEF----G--L-RPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVV  166 (562)
T ss_dssp             HHHHHHCSCCCSEEEEEHHHHHHHHHHHHHT----T--C-CSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEE
T ss_pred             HHHHHCCCCCCCCEECCHHHHHHHHHHHHHC----C--C-CCCCCCEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEE
T ss_conf             8875214568858887999999999999972----9--9-8555531473699659982118999885367777646999


Q ss_pred             C--CCCCCCCCCCHHHH
Q ss_conf             1--23432111100000
Q gi|254780758|r  145 N--FENNFAHLGDTLFR  159 (216)
Q Consensus       145 ~--~~~~~lftGD~lf~  159 (216)
                      +  ++.+++||||.-+.
T Consensus       167 i~t~~g~IlyTGDfr~~  183 (562)
T 3bk2_A          167 IRTPIGTIVHTGDFKLD  183 (562)
T ss_dssp             EEETTEEEEECCSCCCC
T ss_pred             EEECCEEEEEEECCCCC
T ss_conf             98299789998255577


No 37 
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.73  E-value=5.6e-18  Score=122.99  Aligned_cols=149  Identities=19%  Similarity=0.176  Sum_probs=97.9

Q ss_pred             EEEEEECCCCC---CCEEEEEECCCCEEEEECCCCCHHH--------------HHHHHHHCCCCEEEEEECCCCCCCCCC
Q ss_conf             59999708765---7169999889984999838999999--------------999999749975299986988521011
Q gi|254780758|r    5 SFHIVQVTPFK---QNCTFLFDEESLEAVVVDPGGDLDI--------------IKDVIQSRNFHVKQIWITHGHVDHVGG   67 (216)
Q Consensus         5 ~~~~i~v~~~~---~N~~li~~~~~~~~ilID~G~~~~~--------------i~~~l~~~~~~i~~Ii~TH~H~DH~gg   67 (216)
                      .+++.++|+++   -|||++..++.  .+|+|||.....              -...+.+ ..++++|++||+|.||+|+
T Consensus       188 ~vrit~LGG~~EIGrs~~lv~~~~~--~ILlDcG~~~~~~~~~~~~~p~~~~p~~~~l~~-~~~idAVlITHaH~DHiG~  264 (651)
T 3af5_A          188 WIRITGLGGFREVGRSALLVQTDES--FVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLR-EGLLDAIIITHAHLDHCGM  264 (651)
T ss_dssp             CEEEEEEECSSSSSCCEEEEEESSC--EEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHH-TTCCCEEECSCSSHHHHTT
T ss_pred             CEEEEEECCCCCCCCCEEEEEECCC--EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEECCCCHHHHCC
T ss_conf             2799993688862466799996796--899989988565667311367767765212367-5655689978898788686


Q ss_pred             CHHHHHH--HCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCC---------CCCEEEECCCCEEEEE-CCCCCCCCCCC
Q ss_conf             0567886--0795540584389884012344443200234666---------6741896478399762-01233101222
Q gi|254780758|r   68 AAQLKED--LSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARN---------ASSDRWLQDGDTLLLG-THIFKVFHCPG  135 (216)
Q Consensus        68 ~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~gd~i~lg-~~~~~vi~tPG  135 (216)
                      +++|.+.  +.+|+|++......+...................         ......++.++..+++ +.+++++.+ |
T Consensus       265 LP~L~~~g~~~~PIY~T~~T~~L~~~~~~d~~~i~~~~~~~~~y~~~di~~~~~~~~~l~yge~~~i~pd~~it~~~a-G  343 (651)
T 3af5_A          265 LPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNA-G  343 (651)
T ss_dssp             HHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEEC-S
T ss_pred             HHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCEEEECCCEEEEECCC-C
T ss_conf             889997378888776678999999999999999876116777789999999985419957998498079879986568-9


Q ss_pred             CCCCCCCCCCC--C--CCCCCCCCHH
Q ss_conf             47210000012--3--4321111000
Q gi|254780758|r  136 HSPGHVIYVNF--E--NNFAHLGDTL  157 (216)
Q Consensus       136 Ht~g~~~~~~~--~--~~~lftGD~l  157 (216)
                      |+.|+.++++.  +  .+++||||.=
T Consensus       344 H~lGsa~~~i~i~~~~~~IvyTGDfk  369 (651)
T 3af5_A          344 HILGSAIVHLHIGNGLHNIAITGDFK  369 (651)
T ss_dssp             SSTTCEEEEEEETTTTTCEEECCSCC
T ss_pred             CCCCCCEEEEEECCCCEEEEECCCCC
T ss_conf             88703089999568866899777878


No 38 
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.72  E-value=4.6e-17  Score=117.63  Aligned_cols=191  Identities=17%  Similarity=0.146  Sum_probs=105.5

Q ss_pred             CCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCC-------------------------HHHHHHHHHHCCC-CEEEE
Q ss_conf             773599997087657169999889984999838999-------------------------9999999997499-75299
Q gi|254780758|r    2 SKLSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGD-------------------------LDIIKDVIQSRNF-HVKQI   55 (216)
Q Consensus         2 ~~~~~~~i~v~~~~~N~~li~~~~~~~~ilID~G~~-------------------------~~~i~~~l~~~~~-~i~~I   55 (216)
                      +..+++.+.||.=+++|.+|...  ++.+|||+|..                         .+.++..|++.++ +|+++
T Consensus         4 ~~~~I~fldVGqG~adaili~~~--g~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~ID~v   81 (547)
T 2bib_A            4 SGNKIHFINVQEGGSDAIILESN--GHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFI   81 (547)
T ss_dssp             SCEEEEEECBSSSBCCEEEEEET--TEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCE
T ss_pred             CCCEEEEEECCCCCCEEEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf             89999999889999889999999--9999998999865664322222222234554332126788998987598937999


Q ss_pred             EECCCCCCCCCCCHHHHHHHCCC-EEECCHHHHHHHCCH------HHHHHHHHCCCCCCCCCC-EEEECCCCEEEEECCC
Q ss_conf             98698852101105678860795-540584389884012------344443200234666674-1896478399762012
Q gi|254780758|r   56 WITHGHVDHVGGAAQLKEDLSLT-IIGPHKDDAAMMGKV------DEQARLLSIRMNARNASS-DRWLQDGDTLLLGTHI  127 (216)
Q Consensus        56 i~TH~H~DH~gg~~~l~~~~~~~-i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~l~~gd~i~lg~~~  127 (216)
                      |+||.|.||++|++.|.+.++.. ++++...........      ........... ...... ......+..+.+++..
T Consensus        82 IiTH~H~DHigGl~~ll~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~  160 (547)
T 2bib_A           82 LVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTAT-ETGVSVIQNITQGDAHFQFGDMD  160 (547)
T ss_dssp             ECCCSCHHHHTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHH-HTTCEEECSCCTTTTEEEETTEE
T ss_pred             EECCCCHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCEEEECCEE
T ss_conf             99999605769799999658787899799752222100123444799999999998-74997422125798179708816


Q ss_pred             CCCCC-------------CCCCCCCCCCCCC--CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             33101-------------2224721000001--23432111100000135663467989999999999998519997899
Q gi|254780758|r  128 FKVFH-------------CPGHSPGHVIYVN--FENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISF  192 (216)
Q Consensus       128 ~~vi~-------------tPGHt~g~~~~~~--~~~~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v  192 (216)
                      ++++.             +++|...|+++.+  .+.++||+||+=-           .....++..    -..++.+++.
T Consensus       161 ~~v~~~~~~~~~~~~~~~~~~~N~~Sivl~i~~~g~~~LftGD~~~-----------~~e~~ll~~----~~~~~~DvLk  225 (547)
T 2bib_A          161 IQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDN-----------VHGAEDKYG----PLIGKVDLMK  225 (547)
T ss_dssp             EEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCS-----------TTSHHHHHH----HHHCCCSEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCH-----------HHHHHHHHC----CCCCCEEEEE
T ss_conf             9993675455443334457898877689999999999999978980-----------567998646----8888546999


Q ss_pred             EE-CCCCCC--CHHHHHHHCH
Q ss_conf             84-887988--8899988281
Q gi|254780758|r  193 VC-GHGPNS--TIGRERRLNP  210 (216)
Q Consensus       193 ~P-gHG~~t--t~~~e~~~n~  210 (216)
                      +| -||..+  |-..-++.+|
T Consensus       226 v~~HHGS~~s~s~~fl~~v~P  246 (547)
T 2bib_A          226 FNHHHDTNKSNTKDFIKNLSP  246 (547)
T ss_dssp             CTTTTBCSSSSCHHHHHHHCC
T ss_pred             CCCCCCCCCCCCHHHHHHCCC
T ss_conf             689889886767989975499


No 39 
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.72  E-value=3.5e-18  Score=124.19  Aligned_cols=150  Identities=15%  Similarity=0.146  Sum_probs=96.2

Q ss_pred             CEEEEEECCCCC---CCEEEEEECCCCEEEEECCCCCHH----HHHHHHHHCC-CCEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf             359999708765---716999988998499983899999----9999999749-97529998698852101105678860
Q gi|254780758|r    4 LSFHIVQVTPFK---QNCTFLFDEESLEAVVVDPGGDLD----IIKDVIQSRN-FHVKQIWITHGHVDHVGGAAQLKEDL   75 (216)
Q Consensus         4 ~~~~~i~v~~~~---~N~~li~~~~~~~~ilID~G~~~~----~i~~~l~~~~-~~i~~Ii~TH~H~DH~gg~~~l~~~~   75 (216)
                      -++++.++|..+   -|||++..+  +..+|||||....    .....+.... .+|++|++||+|.||+||+++|.++.
T Consensus        10 ~~~~i~~LGG~~eiG~sc~lv~~~--~~~illDcG~~~~~~~~~~~p~~~~~~~~~idai~lTH~H~DH~g~Lp~l~~~~   87 (459)
T 2i7t_A           10 DQLLIRPLGAGQEVGRSCIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT   87 (459)
T ss_dssp             EEEEEEEEESSSSSSSCEEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS
T ss_pred             CEEEEEECCCCCCCCCCEEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHC
T ss_conf             849999826898645689999989--929999588998865200267766678222999998978588769279999864


Q ss_pred             --CCCEEECCHHHHHHHCCHHHHHHHHHCCCCC---------CCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             --7955405843898840123444432002346---------66674189647839976201233101222472100000
Q gi|254780758|r   76 --SLTIIGPHKDDAAMMGKVDEQARLLSIRMNA---------RNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYV  144 (216)
Q Consensus        76 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~  144 (216)
                        +.++|+++.......................         ........+..++....++..++++++ ||++|++++.
T Consensus        88 ~~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~a-gH~~g~~~~~  166 (459)
T 2i7t_A           88 SFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHA-GHVLGAAMFM  166 (459)
T ss_dssp             SCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEEC-CSSTTCEEEE
T ss_pred             CCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEECCCCEEEECCEEEEEEEC-CCCCCCEEEE
T ss_conf             899988831527999998889877541034323567799999776245870799568608759999844-7767857999


Q ss_pred             C--CCCCCCCCCCH
Q ss_conf             1--23432111100
Q gi|254780758|r  145 N--FENNFAHLGDT  156 (216)
Q Consensus       145 ~--~~~~~lftGD~  156 (216)
                      +  ++.++++|||.
T Consensus       167 i~~~~~~i~ytGD~  180 (459)
T 2i7t_A          167 IEIAGVKLLYTGDF  180 (459)
T ss_dssp             EEETTEEEEECCSC
T ss_pred             EEECCEEEEECCCC
T ss_conf             99899988855886


No 40 
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.69  E-value=4.4e-18  Score=123.55  Aligned_cols=151  Identities=15%  Similarity=0.135  Sum_probs=95.7

Q ss_pred             EEEEEECCCCC---CCEEEEEECCCCEEEEECCCCCHHH---H-HHH-HHH-CC-CCEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf             59999708765---7169999889984999838999999---9-999-997-49-9752999869885210110567886
Q gi|254780758|r    5 SFHIVQVTPFK---QNCTFLFDEESLEAVVVDPGGDLDI---I-KDV-IQS-RN-FHVKQIWITHGHVDHVGGAAQLKED   74 (216)
Q Consensus         5 ~~~~i~v~~~~---~N~~li~~~~~~~~ilID~G~~~~~---i-~~~-l~~-~~-~~i~~Ii~TH~H~DH~gg~~~l~~~   74 (216)
                      .+++.++|+++   -|||++..++  ..+|+|||.....   . ... +-. .. .++++|++||+|.||+|++++|.+.
T Consensus       183 ~irit~LGG~~EIGrsc~lv~~~~--~~ILlDcG~~~~~~~~~~~~~~~p~~~~l~~iDAV~LTHaH~DH~G~Lp~L~k~  260 (640)
T 2xr1_A          183 WVRVTALGGCKEVGRSCFLLSTPE--SRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY  260 (640)
T ss_dssp             CCEEEEEECSSSSBCCEEEEECSS--CEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT
T ss_pred             EEEEEEECCCCCCCCCEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCHHHHCCHHHHHHC
T ss_conf             089999478886152779999689--699998888878523357443557768730188999888976763865999852


Q ss_pred             -HCCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCC---------CCCEEEECCCCEEEEE-CCCCCCCCCCCCCCCCCCC
Q ss_conf             -0795540584389884012344443200234666---------6741896478399762-0123310122247210000
Q gi|254780758|r   75 -LSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARN---------ASSDRWLQDGDTLLLG-THIFKVFHCPGHSPGHVIY  143 (216)
Q Consensus        75 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~gd~i~lg-~~~~~vi~tPGHt~g~~~~  143 (216)
                       +.+|+|++......+..................+         ....+.+..++.+.++ +.+++++.+ ||++|+.+.
T Consensus       261 g~~~PIY~T~~T~~L~~~ll~d~~~~~~~~~~~~~y~~~~i~~~~~~~i~l~y~e~~~i~~di~Vt~~~a-GHslGsA~~  339 (640)
T 2xr1_A          261 GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNA-GHILGSAIS  339 (640)
T ss_dssp             TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEEC-SSSTTCEEE
T ss_pred             CCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCEEEEEEC-CCCCCCCCE
T ss_conf             8998899777999999999999998766423468878899998885068558997699579717999726-877865005


Q ss_pred             C--C--CCCCCCCCCCHHH
Q ss_conf             0--1--2343211110000
Q gi|254780758|r  144 V--N--FENNFAHLGDTLF  158 (216)
Q Consensus       144 ~--~--~~~~~lftGD~lf  158 (216)
                      +  +  ...+++||||.-+
T Consensus       340 ~~~I~~g~~~IvyTGDfr~  358 (640)
T 2xr1_A          340 HFHIGDGLHNVVFTGDYKY  358 (640)
T ss_dssp             EEEETTTTEEEEECCSCCS
T ss_pred             EEEEEECCEEEEECCCCCC
T ss_conf             7899508826997378566


No 41 
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10
Probab=99.65  E-value=2.2e-16  Score=113.72  Aligned_cols=139  Identities=13%  Similarity=0.242  Sum_probs=90.0

Q ss_pred             CCCCEEEEEECCCCEEEEECCCCCH--------HHHHHHH-----------------------HHCCCCEEEEEECCCCC
Q ss_conf             6571699998899849998389999--------9999999-----------------------97499752999869885
Q gi|254780758|r   14 FKQNCTFLFDEESLEAVVVDPGGDL--------DIIKDVI-----------------------QSRNFHVKQIWITHGHV   62 (216)
Q Consensus        14 ~~~N~~li~~~~~~~~ilID~G~~~--------~~i~~~l-----------------------~~~~~~i~~Ii~TH~H~   62 (216)
                      .+.||++|..++  ..+|+|+|...        +.+.+..                       .+...++++|++||+|.
T Consensus        18 iGg~~~~i~~~~--~~illD~G~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~ai~iTH~H~   95 (429)
T 2az4_A           18 IGGTVIEVAYKD--AHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHL   95 (429)
T ss_dssp             SSCCEEEEEETT--EEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCH
T ss_pred             CCCCEEEEEECC--EEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHH
T ss_conf             588389999999--089994799977655675411000111234665433335542111001224656665899898717


Q ss_pred             CCCCCCHHHHHHHCCCEEECCHHHHHHHCCHHHHH-HHHHCCCC-CCCCCCEEEECCCCEEEEECCCCCCCCCCCC-CCC
Q ss_conf             21011056788607955405843898840123444-43200234-6666741896478399762012331012224-721
Q gi|254780758|r   63 DHVGGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQA-RLLSIRMN-ARNASSDRWLQDGDTLLLGTHIFKVFHCPGH-SPG  139 (216)
Q Consensus        63 DH~gg~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGH-t~g  139 (216)
                      ||+|+++.+..  ..++|++......+ ....... ........ .........++.++.+.+|+.+++++++ +| .||
T Consensus        96 DH~g~l~~l~~--~~piy~~~~t~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~-~Hsi~g  171 (429)
T 2az4_A           96 DHSRMINYLDP--AVPLYTLKETKMIL-NSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPV-DHDAYG  171 (429)
T ss_dssp             HHHTTGGGBCT--TSCEEEEHHHHHHH-HHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEEC-CCSSTT
T ss_pred             HHHCCHHHHHH--CCCEEECHHHHHHH-HHHHHHHCCCCCCHHHHCCCCCEEEEECCCCEEEECCEEEEEEEC-CCCCCC
T ss_conf             26585256761--69765279999999-998764000123402221554315995899969977779999856-678887


Q ss_pred             CCCCCC--CCCCCCCCCCHHH
Q ss_conf             000001--2343211110000
Q gi|254780758|r  140 HVIYVN--FENNFAHLGDTLF  158 (216)
Q Consensus       140 ~~~~~~--~~~~~lftGD~lf  158 (216)
                      +++|.+  ++.+++||||.-|
T Consensus       172 s~~~~i~~~~~~i~ytGD~~~  192 (429)
T 2az4_A          172 ASALLIRTPDHFITYTGDLRL  192 (429)
T ss_dssp             CEEEEEEETTEEEEECCSCCS
T ss_pred             CEEEEEECCCCEEEECCCEEE
T ss_conf             548998246745885465131


No 42 
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.64  E-value=8.4e-16  Score=110.33  Aligned_cols=142  Identities=8%  Similarity=0.038  Sum_probs=91.1

Q ss_pred             CCCCCCEEEEEECCCCEEEEECCCCCH-----HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH------HCCCEE
Q ss_conf             876571699998899849998389999-----999999997499752999869885210110567886------079554
Q gi|254780758|r   12 TPFKQNCTFLFDEESLEAVVVDPGGDL-----DIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKED------LSLTII   80 (216)
Q Consensus        12 ~~~~~N~~li~~~~~~~~ilID~G~~~-----~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~------~~~~i~   80 (216)
                      |.=...||++.-++  ..+|+|||++.     +..++.+++.--.|++||+||+|.||+|++++|...      +.++||
T Consensus        11 g~~~~~c~lL~~d~--~~ILlDcG~~~~~~~~~~~~~~~~~~~~~IDaVllSHah~DH~GaLP~L~~~~~~~~g~~~pIY   88 (717)
T 2i7x_A           11 GSGTTVGSVVRFDN--VTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVY   88 (717)
T ss_dssp             SSSSCCCEEEEETT--EEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEE
T ss_pred             CCCCCEEEEEEECC--EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEE
T ss_conf             99730389999899--7999989988776774450022112656587899778986775466899985132369888899


Q ss_pred             ECCHHHHHHHCCHHHHHHHHHCCC--CCCC---------CCCEEEECCCCEEEEE----CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             058438988401234444320023--4666---------6741896478399762----012331012224721000001
Q gi|254780758|r   81 GPHKDDAAMMGKVDEQARLLSIRM--NARN---------ASSDRWLQDGDTLLLG----THIFKVFHCPGHSPGHVIYVN  145 (216)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~l~~gd~i~lg----~~~~~vi~tPGHt~g~~~~~~  145 (216)
                      +..+......-.............  ....         +.....++.++.+.+.    +++++++.+ ||+.|++++.+
T Consensus        89 aT~pt~~L~~~~l~D~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~l~Y~q~~~l~~~~~gl~it~~~A-GH~LGsa~~~I  167 (717)
T 2i7x_A           89 ATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNA-GVCPGGSIWCI  167 (717)
T ss_dssp             EEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEEC-SSSTTCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCCEEECCCCCCCEEEEEEEC-CCCCCCEEEEE
T ss_conf             66899999999999999975311655566789999999985048947998598037888579999655-63234269999


Q ss_pred             --CCCCCCCCCCH
Q ss_conf             --23432111100
Q gi|254780758|r  146 --FENNFAHLGDT  156 (216)
Q Consensus       146 --~~~~~lftGD~  156 (216)
                        ...+++||||.
T Consensus       168 ~~~~~~IvytgD~  180 (717)
T 2i7x_A          168 STYSEKLVYAKRW  180 (717)
T ss_dssp             ECSSCEEEECSSC
T ss_pred             EECCEEEEEECCC
T ss_conf             8299599996367


No 43 
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; 2.10A {Thermoanaerobacter tengcongensis MB4}
Probab=99.57  E-value=1.6e-14  Score=102.87  Aligned_cols=63  Identities=27%  Similarity=0.347  Sum_probs=50.3

Q ss_pred             CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHHHHCC-CEEE
Q ss_conf             71699998899849998389999999999997499---752999869885210110567886079-5540
Q gi|254780758|r   16 QNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKEDLSL-TIIG   81 (216)
Q Consensus        16 ~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~~-~i~~   81 (216)
                      -|||||..++  ..+|||||... .+++.+++.|+   +|++|++||.|.||+||++.+.++++. +++.
T Consensus        33 G~S~LIe~~~--~~iLID~G~~~-~~~~~l~~~gi~~~~Id~I~iTH~H~DHigGL~~ll~~~~~~~~~~   99 (284)
T 2p4z_A           33 GLSLLLKKGN--KEIVVDTGQSE-NFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYT   99 (284)
T ss_dssp             SCEEEEEETT--EEEEECCCSST-HHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEE
T ss_pred             EEEEEEEECC--EEEEEECCCCH-HHHHHHHHCCCCHHHCCEEEECCCCHHHCCCCHHHHHHCCCCCCCC
T ss_conf             7899999899--68999079997-9999999849997899899974643543177667886455665444


No 44 
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.50  E-value=5.6e-14  Score=99.74  Aligned_cols=138  Identities=15%  Similarity=0.175  Sum_probs=87.6

Q ss_pred             CCEEEEEECC-CC-----CCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CC-CEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf             7359999708-76-----5716999988998499983899999999999974-99-752999869885210110567886
Q gi|254780758|r    3 KLSFHIVQVT-PF-----KQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSR-NF-HVKQIWITHGHVDHVGGAAQLKED   74 (216)
Q Consensus         3 ~~~~~~i~v~-~~-----~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~-~~-~i~~Ii~TH~H~DH~gg~~~l~~~   74 (216)
                      .|++.++=.+ +|     .++||+|..+  +..+|||||.+.   ...+++. +. +|++|++||.|.||++|++.|...
T Consensus        24 ~m~~~~lG~~~~~~~~~~~~S~~Li~~~--~~~iLiD~G~g~---~~~l~~~~~~~~id~I~iTH~H~DH~~gl~~l~~~   98 (268)
T 1zkp_A           24 AMKMTVVGFWGGFPEAGEATSGYLFEHD--GFRLLVDCGSGV---LAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYA   98 (268)
T ss_dssp             CEEEEEEECBSSSCCTTCCBSEEEEEET--TEEEEECCCTTH---HHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHH
T ss_pred             CCEEEEEECCCCCCCCCCCCCEEEEEEC--CCEEEEECCHHH---HHHHHHCCCHHHCCEEEEECCCHHHHCCHHHHHHH
T ss_conf             7789999248995999996467999999--928999597679---99998549852497999927960333344888765


Q ss_pred             H-----------CCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             0-----------79554058438988401234444320023466667418964783997620123310122247210000
Q gi|254780758|r   75 L-----------SLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIY  143 (216)
Q Consensus        75 ~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~  143 (216)
                      .           ..++++.......+. .           ...........+.++..+++|+.+++.+.+ +|..++++|
T Consensus        99 ~~~~~~~~~~~~~l~i~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~ig~~~v~~~~~-~H~~~~~g~  165 (268)
T 1zkp_A           99 RLITSATKGQLPELPIYGHTFDENGFH-S-----------LTHEPHTKGIPYNPEETLQIGPFSISFLKT-VHPVTCFAM  165 (268)
T ss_dssp             HHHHHHHHCCCCCEEEEECSSSHHHHH-T-----------TCBTTTEEEEECCTTSCEEETTEEEEEEEC-CSSSCCEEE
T ss_pred             HHHCCCCCCCCCCEEEEECHHHHHHHH-H-----------HHHHCCCCEEECCCCCEEEEEEEEEEEECC-CCCCCCCEE
T ss_conf             420233335677445883366788998-7-----------654225533770687559841289974037-777874134


Q ss_pred             CCC--CCCCCCCCCHHH
Q ss_conf             012--343211110000
Q gi|254780758|r  144 VNF--ENNFAHLGDTLF  158 (216)
Q Consensus       144 ~~~--~~~~lftGD~lf  158 (216)
                      .+.  +.+++|+||+-+
T Consensus       166 ~i~~~~~~i~ysgDt~~  182 (268)
T 1zkp_A          166 RITAGNDIVVYSADSSY  182 (268)
T ss_dssp             EEEETTEEEEECCSCCC
T ss_pred             EEECCCCEEEECCCCCC
T ss_conf             77427977998888998


No 45 
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli}
Probab=99.38  E-value=4.7e-13  Score=94.38  Aligned_cols=122  Identities=18%  Similarity=0.144  Sum_probs=77.2

Q ss_pred             CEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCHHHHHHH--CCCEEECCHHHHHHHCCH
Q ss_conf             1699998899849998389999999999997499-7529998698852101105678860--795540584389884012
Q gi|254780758|r   17 NCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNF-HVKQIWITHGHVDHVGGAAQLKEDL--SLTIIGPHKDDAAMMGKV   93 (216)
Q Consensus        17 N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~-~i~~Ii~TH~H~DH~gg~~~l~~~~--~~~i~~~~~~~~~~~~~~   93 (216)
                      .|++|..+  +..+|||||....     ..+.+. ++++|++||.|.||++|+..++...  +.++|++.....     .
T Consensus        40 ss~li~~~--~~~iLiD~G~~~~-----~~~~~~~~id~I~iTH~H~DH~~GL~~l~~~~~~~i~iy~~~~~~~-----~  107 (258)
T 3g1p_A           40 CSGVVKFN--DAITLIDAGLHDL-----ADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQG-----C  107 (258)
T ss_dssp             SEEEEEET--TEEEEECCCCTTH-----HHHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSC-----S
T ss_pred             EEEEEEEC--CEEEEEECCHHHH-----HHCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCCC-----H
T ss_conf             49999989--9789998999999-----8668985887999816741024462455442257853895441120-----2


Q ss_pred             HHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHH
Q ss_conf             34444320023466667418964783997620123310122247210000012--34321111000
Q gi|254780758|r   94 DEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNF--ENNFAHLGDTL  157 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~--~~~~lftGD~l  157 (216)
                      .....      ..........+++++.+.+++.+++.+++ .|++.+++|.+.  +.+++|+||+-
T Consensus       108 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~H~~~~~g~~i~~~~~~i~y~gDt~  166 (258)
T 3g1p_A          108 DDLFK------HPGLLDFSHTVEPFVVFDLQGLQVTPLPL-NHSKLTFGYLLETAHSRVAWLSDTA  166 (258)
T ss_dssp             TTTTT------SCTTEEEEEECCTTCCEEETTEEEEEEEC-CSSSCCEEEEEECSSCEEEEECSCS
T ss_pred             HHHHC------CCCCCCCCCCCCCCEEEECCCEEEECCCC-CCCCCCEEEEEECCCEEEEECCCCC
T ss_conf             24422------56654321235663688505244131324-7898754999962982699848678


No 46 
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida KT2440} PDB: 1xto_A
Probab=99.19  E-value=5.8e-11  Score=82.23  Aligned_cols=71  Identities=11%  Similarity=0.263  Sum_probs=50.0

Q ss_pred             CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHC-------CC---CEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHH
Q ss_conf             716999988998499983899999999999974-------99---75299986988521011056788607955405843
Q gi|254780758|r   16 QNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSR-------NF---HVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKD   85 (216)
Q Consensus        16 ~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~-------~~---~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~   85 (216)
                      +++.+++..+++..+|||||.+..   .++.+.       ++   +|++|++||.|.||+.|++.|.+..+..+|+....
T Consensus        40 ~~ssi~l~~~g~~~iLiD~G~~~~---~ql~~~~~~~~~~~i~~~~Id~I~lTH~H~DH~~GL~~L~~~~~~~v~~~~~~  116 (321)
T 3jxp_A           40 TQSSIALSDDGVHWILCNASPDIR---AQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMV  116 (321)
T ss_dssp             CBCEEEEESSSSSEEEECCCTTHH---HHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHH
T ss_pred             EEEEEEEEECCCEEEEEECCCCHH---HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEEECHHH
T ss_conf             324799997998599997997599---99999765483334678875589970776124767999961220237606667


Q ss_pred             HHHH
Q ss_conf             8988
Q gi|254780758|r   86 DAAM   89 (216)
Q Consensus        86 ~~~~   89 (216)
                      ...+
T Consensus       117 ~~~~  120 (321)
T 3jxp_A          117 HQDL  120 (321)
T ss_dssp             HHHT
T ss_pred             HHHH
T ss_conf             4444


No 47 
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.14  E-value=2.4e-10  Score=78.69  Aligned_cols=84  Identities=20%  Similarity=0.262  Sum_probs=55.2

Q ss_pred             CCEEEEEECC-CC----C-CCEEEEEE--CCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHH
Q ss_conf             7359999708-76----5-71699998--899849998389999999999997499---752999869885210110567
Q gi|254780758|r    3 KLSFHIVQVT-PF----K-QNCTFLFD--EESLEAVVVDPGGDLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQL   71 (216)
Q Consensus         3 ~~~~~~i~v~-~~----~-~N~~li~~--~~~~~~ilID~G~~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l   71 (216)
                      +|++.++=.| ++    + +.|++|..  ..++..+|||||.+.   ...+.+.++   ++++|++||.|+||++|++.|
T Consensus         1 ~M~l~~LGtg~~~p~~~r~~s~~lv~~~~~~~~~~iL~DcG~g~---~~~l~~~~~~~~~i~~IfiTH~H~DH~~Gl~~l   77 (306)
T 2cbn_A            1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGT---QHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGL   77 (306)
T ss_dssp             CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTH---HHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHH
T ss_pred             CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHH---HHHHHHHCCCHHHCCEEEEECCCHHHCCCCCHH
T ss_conf             92899977689989999964889999726889948999997589---999998189966775899834668980784013


Q ss_pred             HHH-------HCCCEEECCHHHHHH
Q ss_conf             886-------079554058438988
Q gi|254780758|r   72 KED-------LSLTIIGPHKDDAAM   89 (216)
Q Consensus        72 ~~~-------~~~~i~~~~~~~~~~   89 (216)
                      ...       -+..+|++......+
T Consensus        78 l~~~~~~~~~~~l~i~gP~~~~~~l  102 (306)
T 2cbn_A           78 LCSRSMSGIIQPLTIYGPQGIREFV  102 (306)
T ss_dssp             HHHHHHTTCCSCEEEEESTTHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf             3101203789876566867789999


No 48 
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.10  E-value=1.9e-10  Score=79.25  Aligned_cols=66  Identities=23%  Similarity=0.420  Sum_probs=45.7

Q ss_pred             CCEEEEEECCCCCCC------EEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCHHHHHH
Q ss_conf             735999970876571------6999988998499983899999999999974997-52999869885210110567886
Q gi|254780758|r    3 KLSFHIVQVTPFKQN------CTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFH-VKQIWITHGHVDHVGGAAQLKED   74 (216)
Q Consensus         3 ~~~~~~i~v~~~~~N------~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~-i~~Ii~TH~H~DH~gg~~~l~~~   74 (216)
                      .|+++++.-..-+..      ..+++  +   .+|+|||.+. .+++.+++.|++ +++|++||.|.||++|+..|.++
T Consensus        12 ~m~i~~l~~~~~~~~~~~e~G~s~~i--e---~iL~D~G~~~-~~~~n~~~lgId~~daV~lTH~H~DH~gGl~~L~~~   84 (267)
T 3h3e_A           12 HMRIHVLCDDSSQNGFESEHGFSVLV--D---SVLFDTGKSD-VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYLSGK   84 (267)
T ss_dssp             CEEEEEEECSCCCTTCCCCSSCEEEE--T---TEEECCCSSS-HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGCCSC
T ss_pred             CEEEEEEECCCCCCCCCCCCEEEEEE--C---CEEEECCCCH-HHHHHHHHCCCCHHHCEEEECCCHHHCCCHHHHHHH
T ss_conf             27999997799998751462255444--5---2899799997-999999984998468489814553110788999876


No 49 
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.00  E-value=1.7e-09  Score=73.69  Aligned_cols=83  Identities=24%  Similarity=0.289  Sum_probs=52.3

Q ss_pred             CEEEEEECC-CC-----CCCEEEEE-ECCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             359999708-76-----57169999-8899849998389999999999997499---75299986988521011056788
Q gi|254780758|r    4 LSFHIVQVT-PF-----KQNCTFLF-DEESLEAVVVDPGGDLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQLKE   73 (216)
Q Consensus         4 ~~~~~i~v~-~~-----~~N~~li~-~~~~~~~ilID~G~~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~   73 (216)
                      |++.++=.| ++     .+.|+++. .+.+++.+|||||.+.-   ..+.+.++   ++++|++||.|+||++|++.+..
T Consensus         1 Mkv~~LGtg~~~p~~~r~~s~~~v~~~~~~~~~iLiD~G~g~~---~~l~~~~~~~~~i~~I~iTH~H~DH~~Gl~~~~~   77 (320)
T 1y44_A            1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQ---HQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLG   77 (320)
T ss_dssp             CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHH---HHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHH
T ss_pred             CEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHH---HHHHHCCCCHHHCCEEEECCCCHHHCCCCHHHHH
T ss_conf             9899997789979999976889999980699489994977999---9999839996676689972445665167135555


Q ss_pred             HH-------CCCEEECCHHHHHH
Q ss_conf             60-------79554058438988
Q gi|254780758|r   74 DL-------SLTIIGPHKDDAAM   89 (216)
Q Consensus        74 ~~-------~~~i~~~~~~~~~~   89 (216)
                      ..       +.++|++......+
T Consensus        78 ~~~~~~~~~~~~iy~p~~~~~~~  100 (320)
T 1y44_A           78 SRSFQGGEDELTVYGPKGIKAFI  100 (320)
T ss_dssp             HHHHTTCCSCEEEEESTTHHHHH
T ss_pred             HHHHCCCCCCCCCCCCHHHHHHH
T ss_conf             55531677654234770178899


No 50 
>3kl7_A Putative metal-dependent hydrolase; structural genomics, joint center for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=98.87  E-value=1.3e-09  Score=74.30  Aligned_cols=159  Identities=21%  Similarity=0.172  Sum_probs=79.4

Q ss_pred             CCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCHH-HHHHHCCCEEECCHHHHH
Q ss_conf             0876571699998899849998389999999999997499-75299986988521011056-788607955405843898
Q gi|254780758|r   11 VTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNF-HVKQIWITHGHVDHVGGAAQ-LKEDLSLTIIGPHKDDAA   88 (216)
Q Consensus        11 v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~-~i~~Ii~TH~H~DH~gg~~~-l~~~~~~~i~~~~~~~~~   88 (216)
                      +..++..|++|..+  +..+||||-.....      ...+ ++++|++||.|.||++.... ..++..++++.. .....
T Consensus        32 It~lGhas~lie~~--g~~ILiDP~~~~~~------~~~~p~iD~VLiTH~H~DH~~~~~l~~~~~~~~~vi~~-~~~~~  102 (235)
T 3kl7_A           32 ITFIKHGSLMLTYD--NHSIQVDPVSEYAD------YTTFPKADIILITHEHGDHLDPKAIQAVEKSDTEIIAN-ENSQK  102 (235)
T ss_dssp             EEEEETTEEEEEET--TEEEEESCCTTTCC------TTSSCCCSEEEECCSSTTTCCHHHHHHHCCTTCEEEEC-HHHHH
T ss_pred             EEEEECCEEEEEEC--CEEEEECCCCCCCC------HHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEEC-HHHHH
T ss_conf             99983159999989--99999889999886------20089888999799870126722012464269669815-89987


Q ss_pred             HHCCHHHHHHHHHCCCCCCCCCCEEEECC-CCEEEEECCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             84012344443200234666674189647-8399762012331012-----------22472100000123432111100
Q gi|254780758|r   89 MMGKVDEQARLLSIRMNARNASSDRWLQD-GDTLLLGTHIFKVFHC-----------PGHSPGHVIYVNFENNFAHLGDT  156 (216)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-gd~i~lg~~~~~vi~t-----------PGHt~g~~~~~~~~~~~lftGD~  156 (216)
                      .+....                   .+.. +....+++.+++.+++           |++.+.+..+..++.+++|+||+
T Consensus       103 ~l~~~~-------------------~~~~~~~~~~~~~~~I~~~p~~h~~~~~~~~~~~~~~~gyvie~~g~~i~~~GDt  163 (235)
T 3kl7_A          103 KLGKGK-------------------VLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDT  163 (235)
T ss_dssp             HHTCSE-------------------ECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSC
T ss_pred             HHHHCC-------------------CCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCC
T ss_conf             751064-------------------2025773277557206789734157876676787533778999799799994586


Q ss_pred             HHHC---CCCCCCC---CC-----CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf             0001---3566346---79-----899999999999985199978998488798888
Q gi|254780758|r  157 LFRS---SIGRTDI---LH-----GDYQQLINSINNKILPLGDEISFVCGHGPNSTI  202 (216)
Q Consensus       157 lf~~---~~G~~d~---~~-----~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~  202 (216)
                      -+..   .+++.|+   |-     -++.+..+    ....+.+.. ++|.|=....+
T Consensus       164 ~~~~e~~~~~~iDv~~lpig~~~~m~~~~A~~----~~~~l~pk~-viP~H~~~~~~  215 (235)
T 3kl7_A          164 EDIPEMKDLKDIDIAFLPVNQPYTMTVSQAAK----AARMFSPKI-LYPYHYGDTKI  215 (235)
T ss_dssp             CSCGGGGGCCSCSEEEEECCTTTSCCHHHHHH----HHHHHCCSE-EEEESCTTCCT
T ss_pred             CCHHHHHHCCCCCEEEECCCCCCCCCHHHHHH----HHHHCCCCE-EEEECCCCCCH
T ss_conf             77577751269879997679977579999999----999729999-99956899888


No 51 
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, seattle structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus}
Probab=98.68  E-value=6.2e-08  Score=64.62  Aligned_cols=57  Identities=25%  Similarity=0.346  Sum_probs=39.9

Q ss_pred             CCEE-EEEEC---CCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf             7169-99988---99849998389999999999997499752999869885210110567886
Q gi|254780758|r   16 QNCT-FLFDE---ESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKED   74 (216)
Q Consensus        16 ~N~~-li~~~---~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~   74 (216)
                      .|+. +|...   .++..+|||+|.+.  ..+.++....++++|++||.|.||+.|+..|...
T Consensus        62 ~~~S~li~~~~~~~~~~~iLiD~G~~~--~~~~~~~~~~~id~I~lTH~H~DH~~GL~~l~~~  122 (293)
T 3md7_A           62 RRASLLVERYDAEGNNTVVVIDTGPDF--RMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTY  122 (293)
T ss_dssp             CBCEEEEEEECTTCCEEEEEECCCTTH--HHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHH
T ss_pred             CCCEEEEEECCCCCCCEEEEEECCCCH--HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf             334799985467899758999688137--9998642345677899844664445575454445


No 52 
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural genomics, PSI-2; 1.80A {Vibrio cholerae o1 biovar eltor str}
Probab=98.67  E-value=1.5e-08  Score=68.23  Aligned_cols=169  Identities=17%  Similarity=0.144  Sum_probs=86.0

Q ss_pred             CCCCCCEEEEEECCCCEEEEECCCC----C--------H-HHHHHHH---------HH-------CCC-CEEEEEECCCC
Q ss_conf             8765716999988998499983899----9--------9-9999999---------97-------499-75299986988
Q gi|254780758|r   12 TPFKQNCTFLFDEESLEAVVVDPGG----D--------L-DIIKDVI---------QS-------RNF-HVKQIWITHGH   61 (216)
Q Consensus        12 ~~~~~N~~li~~~~~~~~ilID~G~----~--------~-~~i~~~l---------~~-------~~~-~i~~Ii~TH~H   61 (216)
                      ..++.++++|...+ +..++||+=.    .        . .......         +.       ..+ ++++|++||.|
T Consensus        65 ~WLGhag~~i~~~g-~t~iliDp~~~~~~~~~~~~~~~~~~~~~r~~g~~~~~p~~R~~p~~idp~~L~~IDaVLITH~H  143 (379)
T 3bv6_A           65 WWLGCTGIWLKSAG-NTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDH  143 (379)
T ss_dssp             EEEETTEEEEEETT-CCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCS
T ss_pred             EECCCCEEEEEECC-CCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCC
T ss_conf             98024689999789-73899899578887665544456421011024544468754557898896897998889989997


Q ss_pred             CCCCCC--CHHHHHHHC--CCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC---
Q ss_conf             521011--056788607--9554058438988401234444320023466667418964783997620123310122---
Q gi|254780758|r   62 VDHVGG--AAQLKEDLS--LTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP---  134 (216)
Q Consensus        62 ~DH~gg--~~~l~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP---  134 (216)
                      .||++.  +..+.++.+  ++++++......+ ..       .+     .+......+..|+++++++.+++++++-   
T Consensus       144 ~DHlD~~tl~~i~~~~~~~~~~igP~~~~~~l-~~-------~g-----vp~~~ii~l~~gd~~~i~~i~I~~~pa~H~~  210 (379)
T 3bv6_A          144 ADHIDVNVAAAVLQNCGEHVKFIGPQACVDLW-LG-------WG-----VPQERCIVAKVGDVLEIGDVKIRVLDSFDRT  210 (379)
T ss_dssp             GGGCCHHHHHHHHHHSCTTCEEEECHHHHHHH-HH-------HT-----CCGGGEEECCTTCEEEETTEEEEEEECCCHH
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEECCHHHHHHH-HH-------CC-----CCHHHEEEECCCCEEEECCEEEEEEEEECCC
T ss_conf             11179699999985079745998378999999-87-------59-----9667668814787289877799999435365


Q ss_pred             -------CCCCC-----------CCCCCC--CCCCCCCCCCHHHHCC---CC---CCCC---C----------CCCHHHH
Q ss_conf             -------24721-----------000001--2343211110000013---56---6346---7----------9899999
Q gi|254780758|r  135 -------GHSPG-----------HVIYVN--FENNFAHLGDTLFRSS---IG---RTDI---L----------HGDYQQL  175 (216)
Q Consensus       135 -------GHt~g-----------~~~~~~--~~~~~lftGD~lf~~~---~G---~~d~---~----------~~d~~~~  175 (216)
                             +|...           .++|.+  ++.++.|+||+.+...   +|   +.|+   +          .-++.+.
T Consensus       211 ~~~~~p~~~~~~~~~~~~~~~~~~~gylIe~~g~~Iy~sGDT~~~~~~~~ig~~~~iDvall~iG~~~~~~~~hmt~~eA  290 (379)
T 3bv6_A          211 ALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDV  290 (379)
T ss_dssp             HHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHH
T ss_conf             10014776444676666688765316889719938999679996478999886479989997888888777668899999


Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             999999985199978998488798
Q gi|254780758|r  176 INSINNKILPLGDEISFVCGHGPN  199 (216)
Q Consensus       176 ~~sl~~~l~~l~~~~~v~PgHG~~  199 (216)
                      .+    ....+.+++ ++|-|=..
T Consensus       291 ~~----aa~~l~~k~-vIP~H~d~  309 (379)
T 3bv6_A          291 LR----AAESLDCQV-VVPFHHDI  309 (379)
T ss_dssp             HH----HHHHHTCSE-EEEESTTS
T ss_pred             HH----HHHHCCCCE-EEEECCCC
T ss_conf             99----999709999-99966345


No 53 
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.56  E-value=1.9e-07  Score=61.80  Aligned_cols=136  Identities=21%  Similarity=0.218  Sum_probs=78.5

Q ss_pred             CCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf             08765716999988998499983899999999999974997529998698852101105678860795540584389884
Q gi|254780758|r   11 VTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM   90 (216)
Q Consensus        11 v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~   90 (216)
                      +..++.+|++|..+  +..+||||-....    .......++++|++||.|.||...  .+..                 
T Consensus        15 It~lGhs~~lIe~~--g~~ILiDP~~~~~----~~~~~~~~~D~VliSH~H~DH~~~--~~~~-----------------   69 (220)
T 1vjn_A           15 ITWFGHACFALEME--GKTIVTDPFDESV----GYPIPNVTADVVTESHQHFDHNAH--HLVK-----------------   69 (220)
T ss_dssp             EEEEETTEEEEEET--TEEEEESCCC---------CCCCCBCSEEECSSCC---CGG--GGCB-----------------
T ss_pred             EEEEECCEEEEEEC--CEEEEECCCCCCC----CCCCCCCCCCEEEECCCCCCCCCH--HHCC-----------------
T ss_conf             99970319999989--9999989998877----898777878899966878676751--2314-----------------


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC-------CCCCCCCC--CCCCCCCCCHHHHC-
Q ss_conf             012344443200234666674189647839976201233101222472-------10000012--34321111000001-
Q gi|254780758|r   91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSP-------GHVIYVNF--ENNFAHLGDTLFRS-  160 (216)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~-------g~~~~~~~--~~~~lftGD~lf~~-  160 (216)
                                         .....+..+...++++.+++.+++- |++       .++.|+++  +.+++|+||+-+.. 
T Consensus        70 -------------------~~~~v~~~~g~~~~~~~~I~~v~a~-H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~  129 (220)
T 1vjn_A           70 -------------------GNFRVIDRPGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLT  129 (220)
T ss_dssp             -------------------SSCEEECSSEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCC
T ss_pred             -------------------CCEEEECCCCEEEECCEEECCCCCE-ECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf             -------------------6269960456599798221243206-51888854787579999849929999689888989


Q ss_pred             -----CCCCCCC---CCC-----CHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             -----3566346---798-----99999999999985199978998488
Q gi|254780758|r  161 -----SIGRTDI---LHG-----DYQQLINSINNKILPLGDEISFVCGH  196 (216)
Q Consensus       161 -----~~G~~d~---~~~-----d~~~~~~sl~~~l~~l~~~~~v~PgH  196 (216)
                           ..|++|+   |-|     ++.+..    +....+.+.. |+|-|
T Consensus       130 ~~~~~~~~~~Dva~lPigg~~~m~~~eA~----~~~~~l~pk~-vIP~H  173 (220)
T 1vjn_A          130 PAQVEEIGEIDVLLVPVGGTYTIGPKEAK----EVADLLNAKV-IIPMH  173 (220)
T ss_dssp             HHHHHHHCCCSEEEEECCSSSSCCHHHHH----HHHHHTTCSE-EEEES
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCCHHHHH----HHHHHHCCCE-EEEEE
T ss_conf             99998528976899944996538999999----9999709999-99970


No 54 
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.52  E-value=2.6e-07  Score=61.06  Aligned_cols=134  Identities=16%  Similarity=0.157  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEECCCCEEEEECCCC--------CH--HH---HHHHHHH----------------CCC-CEEEEEECCCC
Q ss_conf             8765716999988998499983899--------99--99---9999997----------------499-75299986988
Q gi|254780758|r   12 TPFKQNCTFLFDEESLEAVVVDPGG--------DL--DI---IKDVIQS----------------RNF-HVKQIWITHGH   61 (216)
Q Consensus        12 ~~~~~N~~li~~~~~~~~ilID~G~--------~~--~~---i~~~l~~----------------~~~-~i~~Ii~TH~H   61 (216)
                      ..+++++++|... ++..+||||=.        ..  ..   .......                ..+ +|++|++||.|
T Consensus        41 ~WLG~s~~~i~~~-~g~~IliDP~ls~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~R~~p~~idp~~L~~IDaVLiTH~H  119 (360)
T 2wyl_A           41 WWLGCTGIWLKSE-GGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDH  119 (360)
T ss_dssp             EEEETTEEEEECT-TCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSC
T ss_pred             EEECCCEEEEECC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCC
T ss_conf             9945758999906-991999868878877766665555321111235543457755557898896888888899979996


Q ss_pred             CCCCCCCHH--HHHHH--CCCEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC----
Q ss_conf             521011056--78860--7955405843898840123444432002346666741896478399762012331012----
Q gi|254780758|r   62 VDHVGGAAQ--LKEDL--SLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHC----  133 (216)
Q Consensus        62 ~DH~gg~~~--l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~t----  133 (216)
                      .||++....  +.+..  .++++++......+ ...       +     ........+..|+.+.+++.++.++.+    
T Consensus       120 ~DHld~~~l~~~~~~~~~~~~~~gP~~~~~~l-~~~-------g-----~~~~~i~~~~~g~~~~v~~~~i~~~~~~~~~  186 (360)
T 2wyl_A          120 NDHIDVNVAAAVMQNCADDVPFIGPKTCVDLW-IGW-------G-----VPKERCIVVKPGDVVKVKDIEIHALDAFDRT  186 (360)
T ss_dssp             TTTCCHHHHHHHHHHSCTTCCEEECHHHHHHH-HHH-------T-----CCGGGEEECCTTCEEEETTEEEEEEECCCC-
T ss_pred             HHHCCCHHHHHHHHCCCCCCEEECCHHHHHHH-HHC-------C-----CCHHHEEEECCCCEEEEECCEEEEEEEEEEE
T ss_conf             02178099999985476774386588999999-866-------9-----9655157605786577402135776314555


Q ss_pred             -----C-CC----------CCCCCCCCC--CCCCCCCCCCHHHH
Q ss_conf             -----2-24----------721000001--23432111100000
Q gi|254780758|r  134 -----P-GH----------SPGHVIYVN--FENNFAHLGDTLFR  159 (216)
Q Consensus       134 -----P-GH----------t~g~~~~~~--~~~~~lftGD~lf~  159 (216)
                           | .|          ....+.|.+  ++.++.|+||+-+.
T Consensus       187 ~~~~~p~~~~~~~~~~~~~~~~~~g~~ie~~g~tIy~sGDT~~~  230 (360)
T 2wyl_A          187 ALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYS  230 (360)
T ss_dssp             -----------------CCTTTBEEEEEEETTEEEEECTTCCCC
T ss_pred             EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC
T ss_conf             56642664446665577787740489997199189992698866


No 55 
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=98.43  E-value=7.4e-08  Score=64.18  Aligned_cols=51  Identities=24%  Similarity=0.530  Sum_probs=36.4

Q ss_pred             CEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             169999889984999838999999999999749975299986988521011056788
Q gi|254780758|r   17 NCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKE   73 (216)
Q Consensus        17 N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~   73 (216)
                      +.|+.+ ++.  .+|||||.+..   ..+.....++++|++||.|.||++|++.|..
T Consensus        12 ~t~~~~-~~~--~iLiD~G~g~~---~~l~~~~~~i~~IfiTH~H~DHi~gl~~l~~   62 (280)
T 2e7y_A           12 STWIYY-SPE--RILFDAGEGVS---TTLGSKVYAFKYVFLTHGHVDHIAGLWGVVN   62 (280)
T ss_dssp             EEEEEE-GGG--TEEEEECTTHH---HHHGGGGGGCCEEECSCCCHHHHTTHHHHHH
T ss_pred             EEEEEE-CCC--EEEEECCHHHH---HHHCCCCCCCCEEEEECCCHHHHCCHHHHHH
T ss_conf             799998-998--79998974499---9855552238789991786356467999999


No 56 
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=80.80  E-value=0.92  Score=22.97  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHCCCCC-EEEEECCCCCCCHHHHHHH
Q ss_conf             9999999998519997-8998488798888999882
Q gi|254780758|r  174 QLINSINNKILPLGDE-ISFVCGHGPNSTIGRERRL  208 (216)
Q Consensus       174 ~~~~sl~~~l~~l~~~-~~v~PgHG~~tt~~~e~~~  208 (216)
                      .+.+.. +.|+..... +.++--||=.+.-+.||-.
T Consensus       287 Tl~~aa-~~Lk~~GA~~V~~~~THgvfs~~A~~~l~  321 (379)
T 2ji4_A          287 SFLAAA-ETLKERGAYKIFVMATHGLLSSDAPRRIE  321 (379)
T ss_dssp             HHHHHH-HHHHHTTCCEEEEEEEEECCCTTHHHHHH
T ss_pred             HHHHHH-HHHHHCCCCEEEEEEECCCCCCHHHHHHH
T ss_conf             699999-99997699837999979768816999997


No 57 
>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B}
Probab=71.76  E-value=2.7  Score=20.25  Aligned_cols=34  Identities=15%  Similarity=0.050  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHCCCC-CEEEEECCCCCCCHHHHHHHC
Q ss_conf             99999999851999-789984887988889998828
Q gi|254780758|r  175 LINSINNKILPLGD-EISFVCGHGPNSTIGRERRLN  209 (216)
Q Consensus       175 ~~~sl~~~l~~l~~-~~~v~PgHG~~tt~~~e~~~n  209 (216)
                      +.+.. +.|+.... .+.++--||-.+.-+.||-.+
T Consensus       232 i~~aa-~~Lk~~GA~~V~~~~THglfs~~a~e~l~~  266 (319)
T 3dah_A          232 LCKAA-QVLKERGAKQVFAYATHPVLSGGAADRIAA  266 (319)
T ss_dssp             HHHHH-HHHHHTTCSCEEEEEEEECCCTTHHHHHHT
T ss_pred             HHHHH-HHHHHCCCCEEEEEEECCCCCHHHHHHHHH
T ss_conf             99999-999977998648997466448079999861


No 58 
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=68.88  E-value=3.3  Score=19.78  Aligned_cols=34  Identities=24%  Similarity=0.238  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHCCCCC-EEEEECCCCCCCHHHHHHHC
Q ss_conf             999999998519997-89984887988889998828
Q gi|254780758|r  175 LINSINNKILPLGDE-ISFVCGHGPNSTIGRERRLN  209 (216)
Q Consensus       175 ~~~sl~~~l~~l~~~-~~v~PgHG~~tt~~~e~~~n  209 (216)
                      +.+.. +.|+..... +.++--||=.+.-+.||-.+
T Consensus       233 l~~aa-~~Lk~~GA~~V~~~~THglfs~~A~~~l~~  267 (317)
T 1dku_A          233 ITLAA-NALVENGAKEVYACCTHPVLSGPAVERINN  267 (317)
T ss_dssp             HHHHH-HHHHHTTCSEEEEECSEECCCTTHHHHHHT
T ss_pred             HHHHH-HHHHHCCCCEEEEEEECCCCCCHHHHHHHC
T ss_conf             99999-999976997789996534348379999860


No 59 
>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A
Probab=64.05  E-value=3.1  Score=19.87  Aligned_cols=28  Identities=29%  Similarity=0.259  Sum_probs=12.4

Q ss_pred             HHHCCCCC-EEEEECCCCCCCHHHHHHHC
Q ss_conf             98519997-89984887988889998828
Q gi|254780758|r  182 KILPLGDE-ISFVCGHGPNSTIGRERRLN  209 (216)
Q Consensus       182 ~l~~l~~~-~~v~PgHG~~tt~~~e~~~n  209 (216)
                      .+...... +.++--||-.+.-+.||-.+
T Consensus       235 ~Lk~~GA~~V~~~aTHglfs~~a~e~l~~  263 (326)
T 2h06_A          235 KLLSAGATRVYAILTHGIFSGPAISRINN  263 (326)
T ss_dssp             HHHHTTEEEEEEEEEEECCCTTHHHHHHH
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHC
T ss_conf             99857998656886434458179999864


No 60 
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent enzyme, lyase, cytoplasm, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=55.56  E-value=3.5  Score=19.61  Aligned_cols=12  Identities=17%  Similarity=0.030  Sum_probs=4.7

Q ss_pred             EEEEEECCCCCC
Q ss_conf             529998698852
Q gi|254780758|r   52 VKQIWITHGHVD   63 (216)
Q Consensus        52 i~~Ii~TH~H~D   63 (216)
                      +..+++|+..+|
T Consensus       313 ~~~vvit~~TYd  324 (755)
T 2vyc_A          313 PSYCVVTNCTYD  324 (755)
T ss_dssp             CSCEEEESSCTT
T ss_pred             CCEEEEECCCCC
T ss_conf             858999657768


No 61 
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=54.51  E-value=8.3  Score=17.41  Aligned_cols=36  Identities=11%  Similarity=0.127  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHCCCC-CEEEEECCCCCCCHHHHHHHCH
Q ss_conf             999999999851999-7899848879888899988281
Q gi|254780758|r  174 QLINSINNKILPLGD-EISFVCGHGPNSTIGRERRLNP  210 (216)
Q Consensus       174 ~~~~sl~~~l~~l~~-~~~v~PgHG~~tt~~~e~~~n~  210 (216)
                      .+.++. +.++.... ++..+--||=.+.-+.||-.+.
T Consensus       220 Tl~~aa-~~Lk~~GA~~V~~~~THgifs~~a~~~l~~~  256 (284)
T 1u9y_A          220 TMATAV-KLLKEQGAKKIIAACVHPVLIGDALNKLYSA  256 (284)
T ss_dssp             HHHHHH-HHHHHTTCCSEEEEEEECCCCTTHHHHHHHH
T ss_pred             HHHHHH-HHHHHCCCCEEEEEEECCCCCHHHHHHHHHC
T ss_conf             799999-9998669986999997973884799999738


No 62 
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=43.78  E-value=15  Score=15.93  Aligned_cols=55  Identities=22%  Similarity=0.338  Sum_probs=28.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf             224721000001234321111000001356634679899999999999985199978998488798888
Q gi|254780758|r  134 PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTI  202 (216)
Q Consensus       134 PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~  202 (216)
                      +||-||++.+-..+   ++..|..|+           +.+++.+-+.++-......+++|+|-|-.++.
T Consensus       215 ~GHIPGA~n~p~~~---~~~~~~~~k-----------~~~el~~~~~~~gi~~~k~vI~YC~sG~~As~  269 (302)
T 3olh_A          215 PGHIPGTVNIPFTD---FLSQEGLEK-----------SPEEIRHLFQEKKVDLSKPLVATCGSGVTACH  269 (302)
T ss_dssp             CCCCTTCEECCGGG---GBCSSSCBC-----------CHHHHHHHHHHTTCCTTSCEEEECSSSSTTHH
T ss_pred             CCCCCCCCCCCHHH---HHHCCCCCC-----------CHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf             78868962177899---500032359-----------99999999997499999999998583999999


No 63 
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=37.81  E-value=19  Score=15.38  Aligned_cols=23  Identities=13%  Similarity=0.293  Sum_probs=9.8

Q ss_pred             HHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf             99997499752999869885210110
Q gi|254780758|r   43 DVIQSRNFHVKQIWITHGHVDHVGGA   68 (216)
Q Consensus        43 ~~l~~~~~~i~~Ii~TH~H~DH~gg~   68 (216)
                      +.++..++++   ++..+.-|...+.
T Consensus        69 ~~l~~~~ipv---~~i~GNHD~~~~~   91 (333)
T 1ii7_A           69 QIPKEHSIPV---FAIEGNHDRTQRG   91 (333)
T ss_dssp             HHHHTTTCCE---EEECCTTTCCSSS
T ss_pred             HHHHHCCCCE---EEECCCCCCHHCC
T ss_conf             9998689959---9964666621000


No 64 
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=34.40  E-value=21  Score=15.05  Aligned_cols=55  Identities=18%  Similarity=0.206  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf             224721000001234321111000001356634679899999999999985199978998488798888
Q gi|254780758|r  134 PGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTI  202 (216)
Q Consensus       134 PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~  202 (216)
                      +||-||++.+-..+   ++..|..|+           +.+++.+-+.+.-...+..+++|.+-|-.+++
T Consensus       201 ~GhIPGAvnip~~~---~~~~~~~~k-----------~~~el~~~~~~~gi~~~k~ii~yC~sG~rAs~  255 (296)
T 1rhs_A          201 SGHIRGSVNMPFMN---FLTEDGFEK-----------SPEELRAMFEAKKVDLTKPLIATCRKGVTACH  255 (296)
T ss_dssp             CCEETTCEECCGGG---GBCTTSCBC-----------CHHHHHHHHHHTTCCTTSCEEEECSSSSTHHH
T ss_pred             CCCCCCCCCCCHHH---HHCCCCCCC-----------CHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
T ss_conf             76777865578899---715544579-----------99999999997599999999998971999999


No 65 
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=25.43  E-value=21  Score=15.13  Aligned_cols=71  Identities=20%  Similarity=0.292  Sum_probs=36.2

Q ss_pred             EECCCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCCCC---CCCCCH--HHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9647839976201233101-222472100000123432---111100--000135663467989999999999998519
Q gi|254780758|r  114 WLQDGDTLLLGTHIFKVFH-CPGHSPGHVIYVNFENNF---AHLGDT--LFRSSIGRTDILHGDYQQLINSINNKILPL  186 (216)
Q Consensus       114 ~l~~gd~i~lg~~~~~vi~-tPGHt~g~~~~~~~~~~~---lftGD~--lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l  186 (216)
                      .+.++..+.+||..+..-. .-|||.|++.+.---+.+   +=-||-  +|+.+-  ..+-+.|...+++-+.+++..-
T Consensus       220 ~~~~~~~l~LgGv~i~~~~gl~gHSDgDV~lHAi~DAilGa~~~gDIG~~fp~~d--~~~k~~~S~~~l~~~~~~~~~~  296 (371)
T 1w55_A          220 EFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTD--MKFKNANSMELLKQAYDKVREI  296 (371)
T ss_dssp             EEEEESCEEETTEEEESSEEECSSTTCCHHHHHHHHHHHHHTTCCCHHHHSCCTT--STTTTCCHHHHHHHHHHHHHHT
T ss_pred             EECCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC--CCCCCCCCHHHHHHHHHHHHHC
T ss_conf             8348966999415027877624874874117889998765504775787545433--3124467199999999999985


No 66 
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=24.79  E-value=31  Score=14.06  Aligned_cols=23  Identities=13%  Similarity=0.162  Sum_probs=12.4

Q ss_pred             EEECCCCCHHHHHHHHHHCCCCE
Q ss_conf             99838999999999999749975
Q gi|254780758|r   30 VVVDPGGDLDIIKDVIQSRNFHV   52 (216)
Q Consensus        30 ilID~G~~~~~i~~~l~~~~~~i   52 (216)
                      -+||-+++...+.++|++.|.++
T Consensus        24 gVi~~~Gn~~s~~~aL~~lG~~~   46 (208)
T 2iss_D           24 GVLGVQGDVREHVEALHKLGVET   46 (208)
T ss_dssp             EEECSSSCHHHHHHHHHHTTCEE
T ss_pred             EEEECCCCHHHHHHHHHHCCCCE
T ss_conf             99956887999999999889989


No 67 
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=24.66  E-value=26  Score=14.54  Aligned_cols=23  Identities=22%  Similarity=0.458  Sum_probs=14.6

Q ss_pred             EEECCCCEEEEECCCCCCCCCCC
Q ss_conf             89647839976201233101222
Q gi|254780758|r  113 RWLQDGDTLLLGTHIFKVFHCPG  135 (216)
Q Consensus       113 ~~l~~gd~i~lg~~~~~vi~tPG  135 (216)
                      ..|.+||.+.+|...++++..|+
T Consensus       120 ~~L~~gD~i~iG~~~l~f~~~p~  142 (143)
T 2kb3_A          120 QVMQTGDEIQIGKFRLVFLAGPA  142 (143)
T ss_dssp             EECCTTEEEEETTEEEEEEECCC
T ss_pred             EECCCCCEEEECCEEEEEEECCC
T ss_conf             79999999999999999993899


No 68 
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=24.43  E-value=32  Score=14.02  Aligned_cols=41  Identities=17%  Similarity=0.204  Sum_probs=28.2

Q ss_pred             CEEEEEECCCCEEEE-ECCCCC---HHHHHHHHHHCCCCEEEEEE
Q ss_conf             169999889984999-838999---99999999974997529998
Q gi|254780758|r   17 NCTFLFDEESLEAVV-VDPGGD---LDIIKDVIQSRNFHVKQIWI   57 (216)
Q Consensus        17 N~~li~~~~~~~~il-ID~G~~---~~~i~~~l~~~~~~i~~Ii~   57 (216)
                      ++|+..+...+.++| +|-|++   ...+++.|++.+++.+.-++
T Consensus        45 ~~~~~g~~~~k~V~LTFDDG~~~~~t~~iLd~Lk~~~vkATFFv~   89 (247)
T 2j13_A           45 GGFYLGDTKKKDIYLTFDNGYENGYTGKILDVLKEKKVPATFFVT   89 (247)
T ss_dssp             TEESBCCTTSCEEEEEEEESSCCSCHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
T ss_conf             968978999998999874899856499999999986983999986


No 69 
>3aay_A Putative thiosulfate sulfurtransferase; X-RAY crystallography, sulfurtranserase, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=23.75  E-value=33  Score=13.94  Aligned_cols=21  Identities=10%  Similarity=0.268  Sum_probs=13.3

Q ss_pred             CHHHHHHHHHHCCCCE-EEEEE
Q ss_conf             9999999999749975-29998
Q gi|254780758|r   37 DLDIIKDVIQSRNFHV-KQIWI   57 (216)
Q Consensus        37 ~~~~i~~~l~~~~~~i-~~Ii~   57 (216)
                      +.+.+.+.+++.|+.- +.|++
T Consensus        61 ~~~~~~~~l~~lGI~~~~~VVv   82 (277)
T 3aay_A           61 DAQQFSKLLSERGIANEDTVIL   82 (277)
T ss_dssp             CHHHHHHHHHHHTCCTTSEEEE
T ss_pred             CHHHHHHHHHHCCCCCCCEEEE
T ss_conf             7999999998729788998999


No 70 
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure initiative; 2.20A {Chlamydia trachomatis D}
Probab=23.64  E-value=25  Score=14.65  Aligned_cols=27  Identities=19%  Similarity=0.314  Sum_probs=20.0

Q ss_pred             CCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf             674189647839976201233101222
Q gi|254780758|r  109 ASSDRWLQDGDTLLLGTHIFKVFHCPG  135 (216)
Q Consensus       109 ~~~~~~l~~gd~i~lg~~~~~vi~tPG  135 (216)
                      ......+.+||.+.+|+..++++..++
T Consensus        78 v~~~~~L~~gd~i~iG~~~~~~~~~~~  104 (106)
T 3gqs_A           78 IEHQSTLSANQVVALGTTLFLLVDYAA  104 (106)
T ss_dssp             CSSEEECCTTCCEEETTEEEEEEEEC-
T ss_pred             CCCEEECCCCCEEEECCEEEEEEECCC
T ss_conf             477389999999999899999992699


No 71 
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=23.13  E-value=34  Score=13.87  Aligned_cols=12  Identities=17%  Similarity=0.016  Sum_probs=7.1

Q ss_pred             CCCCCCCCCCHH
Q ss_conf             234321111000
Q gi|254780758|r  146 FENNFAHLGDTL  157 (216)
Q Consensus       146 ~~~~~lftGD~l  157 (216)
                      +.+++|+.=|.+
T Consensus       116 ~G~rVLIVDDvl  127 (186)
T 1l1q_A          116 PHDVVLLHDDVL  127 (186)
T ss_dssp             TTCCEEEEEEEE
T ss_pred             CCCEEEEEEEHH
T ss_conf             899899995343


No 72 
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=22.30  E-value=35  Score=13.78  Aligned_cols=13  Identities=15%  Similarity=0.171  Sum_probs=7.2

Q ss_pred             CCCCCCCCCCCHH
Q ss_conf             1234321111000
Q gi|254780758|r  145 NFENNFAHLGDTL  157 (216)
Q Consensus       145 ~~~~~~lftGD~l  157 (216)
                      .+..++|+.=|.+
T Consensus       120 ~~G~rVlIVDDvi  132 (187)
T 1g2q_A          120 PAGSNVIIVDDII  132 (187)
T ss_dssp             CTTCEEEEEEEEE
T ss_pred             CCCCEEEEEECCC
T ss_conf             6786799983004


No 73 
>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1
Probab=21.83  E-value=36  Score=13.72  Aligned_cols=13  Identities=23%  Similarity=0.424  Sum_probs=4.4

Q ss_pred             CCCCCCCCCCHHH
Q ss_conf             9885210110567
Q gi|254780758|r   59 HGHVDHVGGAAQL   71 (216)
Q Consensus        59 H~H~DH~gg~~~l   71 (216)
                      |.|.-|......+
T Consensus         5 ~~~~~~~~~~~~i   17 (126)
T 2if1_A            5 HHHHHHTDPMSAI   17 (126)
T ss_dssp             CCCSSCCCGGGGC
T ss_pred             CCCCCCCCCCHHH
T ss_conf             5444457810220


No 74 
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=21.03  E-value=37  Score=13.62  Aligned_cols=12  Identities=8%  Similarity=0.304  Sum_probs=6.8

Q ss_pred             CCCCCCCCCCHH
Q ss_conf             234321111000
Q gi|254780758|r  146 FENNFAHLGDTL  157 (216)
Q Consensus       146 ~~~~~lftGD~l  157 (216)
                      .+.++++.=|.+
T Consensus       119 ~G~rVllVDDvi  130 (175)
T 1vch_A          119 LNQRVVLVSDVV  130 (175)
T ss_dssp             TTCEEEEEEEEE
T ss_pred             CCCEEEEEEEEE
T ss_conf             898899998441


No 75 
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=20.82  E-value=38  Score=13.59  Aligned_cols=39  Identities=5%  Similarity=0.009  Sum_probs=19.7

Q ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCCH---HHHHHHCCCEEECCH
Q ss_conf             99999974997529998698852101105---678860795540584
Q gi|254780758|r   41 IKDVIQSRNFHVKQIWITHGHVDHVGGAA---QLKEDLSLTIIGPHK   84 (216)
Q Consensus        41 i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~---~l~~~~~~~i~~~~~   84 (216)
                      +.+.+++.+.+++.|+-.     -.+|.+   .+....+.+.+...+
T Consensus        52 la~~i~~~~~~~d~Ivg~-----~~gGipla~~va~~l~~p~~~~RK   93 (205)
T 2wns_A           52 LFQTAQNAGISFDTVCGV-----PYTALPLATVICSTNQIPMLIRRK   93 (205)
T ss_dssp             HHHHHHHTTCCCSEEEEC-----TTTTHHHHHHHHHHHTCCEEEECC
T ss_pred             HHHHHHHCCCCCCEEEEC-----CHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             999888608888758712-----022189989888753899346762


No 76 
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A
Probab=20.77  E-value=38  Score=13.59  Aligned_cols=34  Identities=15%  Similarity=0.240  Sum_probs=16.4

Q ss_pred             EEEECCCC--CH--HHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf             99983899--99--9999999974997529998698852
Q gi|254780758|r   29 AVVVDPGG--DL--DIIKDVIQSRNFHVKQIWITHGHVD   63 (216)
Q Consensus        29 ~ilID~G~--~~--~~i~~~l~~~~~~i~~Ii~TH~H~D   63 (216)
                      +++||+..  .+  +.+.+.+.+.++++ -++++-...+
T Consensus       110 vlVVDa~~Gv~~qT~~v~~~~~~~~lp~-i~~INK~Dr~  147 (529)
T 2h5e_A          110 LMVIDAAKGVEDRTRKLMEVTRLRDTPI-LTFMNKLDRD  147 (529)
T ss_dssp             EEEEETTTCSCHHHHHHHHHHTTTTCCE-EEEEECTTSC
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHCCCCE-EEEEEEECCC
T ss_conf             9996468874233188887777517870-7544431467


No 77 
>2p1z_A Phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.44A {Corynebacterium diphtheriae NCTC13129}
Probab=20.44  E-value=39  Score=13.55  Aligned_cols=13  Identities=15%  Similarity=0.066  Sum_probs=7.3

Q ss_pred             CCCCCCCCCCCHH
Q ss_conf             1234321111000
Q gi|254780758|r  145 NFENNFAHLGDTL  157 (216)
Q Consensus       145 ~~~~~~lftGD~l  157 (216)
                      .+.+++++.=|.+
T Consensus       112 ~~g~rVlIVDDvi  124 (180)
T 2p1z_A          112 VVGKKVLVVEDTT  124 (180)
T ss_dssp             CTTCEEEEEEEEC
T ss_pred             CCCCEEEEEEEEE
T ss_conf             5897689997523


No 78 
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=20.43  E-value=39  Score=13.55  Aligned_cols=12  Identities=17%  Similarity=0.185  Sum_probs=6.4

Q ss_pred             CCCCCCCCCCHH
Q ss_conf             234321111000
Q gi|254780758|r  146 FENNFAHLGDTL  157 (216)
Q Consensus       146 ~~~~~lftGD~l  157 (216)
                      ++.++|+.=|.+
T Consensus       195 ~g~rVLIVDDvi  206 (291)
T 1o57_A          195 TGSNVLIIDDFM  206 (291)
T ss_dssp             TTCEEEEEEEEE
T ss_pred             CCCEEEEEHHHH
T ss_conf             885699842423


No 79 
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=20.09  E-value=39  Score=13.50  Aligned_cols=35  Identities=11%  Similarity=0.070  Sum_probs=15.7

Q ss_pred             HHHCCCCEEEEEECCCCCCCCCCC---HHHHHHHCCCEEECCH
Q ss_conf             997499752999869885210110---5678860795540584
Q gi|254780758|r   45 IQSRNFHVKQIWITHGHVDHVGGA---AQLKEDLSLTIIGPHK   84 (216)
Q Consensus        45 l~~~~~~i~~Ii~TH~H~DH~gg~---~~l~~~~~~~i~~~~~   84 (216)
                      ++..+.+++.|+--     =.+|.   ..+..+.+.+.+...+
T Consensus        65 ~k~~~~~~D~Ivgi-----e~~Gi~~A~~lA~~Lg~p~v~vRK  102 (236)
T 1qb7_A           65 YRAMSPAPTHILGF-----DARGFLFGPMIAVELEIPFVLMRK  102 (236)
T ss_dssp             HHHCSSCCSEEEEE-----TTGGGGTHHHHHHHHTCCEEEEBC
T ss_pred             HHHCCCCCCEEEEE-----CCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf             98548999899966-----446589899999986347688653


Done!