RPSBLAST alignment of GI: 254780758 and protein with PDBid: 2q9u
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414
Score = 72.1 bits (176), Expect = 1e-13
Identities = 27/208 (12%), Positives = 49/208 (23%), Gaps = 43/208 (20%)
Query: 17 NCTFLFDEESLEAVVVDPGGD------LDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQ 70
N F+ DE V+D L I +K + + H DH
Sbjct: 42 NSYFIDDEC---PTVIDSVKYPFAEEWLSRIAACCPLDK--IKYVVMNHAEGDHASSLKD 96
Query: 71 LKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKV 130
+ K + + ++ + D TL +G K
Sbjct: 97 HYHKFTNATFVCTKKCQEHLK-----------ILYGMEKATWLIVDDKYTLKIGKRTLKF 145
Query: 131 FHCP-GHSPGHVIYVNFENNFAHLGDT---------LFRSSIGRTDILH----------G 170
P H P E+ D + + ++H G
Sbjct: 146 IPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILG 205
Query: 171 DYQQLINSINNKILPLGDEISFVCGHGP 198
+ + + + + HG
Sbjct: 206 LFSAQMRKALEVASTVEIKY-ILSAHGV 232