RPSBLAST alignment of GI: 254780758 and protein with PDBid: 2xr1

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Length = 640

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 19/146 (13%)

Query: 17  NCTFLFDEESLEAVVVD----PGGDLDIIKDVIQSRNFHVKQI---WITHGHVDHVGGAA 69
           +C  L   ES   +++D     G D ++   +     F + QI    +TH H+DH G   
Sbjct: 198 SCFLLSTPESR--ILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVP 255

Query: 70  QL-KEDLSLTIIGPH---------KDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGD 119
            L K      +             + D   +   + +       M A+       L   +
Sbjct: 256 LLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEE 315

Query: 120 TLLLGTHIFKVFHCPGHSPGHVIYVN 145
              +   I   FH  GH  G  I   
Sbjct: 316 VTDIAPDIKLTFHNAGHILGSAISHF 341