RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780759|ref|YP_003065172.1| hypothetical protein
CLIBASIA_03230 [Candidatus Liberibacter asiaticus str. psy62]
         (162 letters)



>gnl|CDD|185210 PRK15310, PRK15310, fimbrial outer membrane usher protein TcfC;
           Provisional.
          Length = 895

 Score = 27.3 bits (60), Expect = 2.2
 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 27  ESDTDSRHE--KATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRRE 84
           E+  +S+H     T+ LSA    G+  T      V  ND  ++ S      ESD    R 
Sbjct: 407 ETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYND-GFSASLWRNHTESDACSGRH 465

Query: 85  KATISLSAHDKEGSKHTMNAEFSVP 109
                 S H     + +MNA  SVP
Sbjct: 466 PQ----SVHASMTCQTSMNASLSVP 486


>gnl|CDD|178659 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
          Length = 514

 Score = 25.2 bits (55), Expect = 8.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 16  CVAHALLTKKIESDTDSRHEKA 37
           C+ H L TK++ES    R E+A
Sbjct: 132 CMEHLLTTKRLESFAKHRAEEA 153


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.310    0.124    0.354 

Gapped
Lambda     K      H
   0.267   0.0661    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 2,253,106
Number of extensions: 115636
Number of successful extensions: 173
Number of sequences better than 10.0: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 8
Length of query: 162
Length of database: 5,994,473
Length adjustment: 86
Effective length of query: 76
Effective length of database: 4,136,185
Effective search space: 314350060
Effective search space used: 314350060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 53 (24.3 bits)