RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780759|ref|YP_003065172.1| hypothetical protein
CLIBASIA_03230 [Candidatus Liberibacter asiaticus str. psy62]
         (162 letters)



>d1t2sa_ b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila
          melanogaster) [TaxId: 7227]}
          Length = 123

 Score = 25.9 bits (57), Expect = 1.6
 Identities = 4/32 (12%), Positives = 15/32 (46%)

Query: 65 KYTISSLTKKIESDTDFRREKATISLSAHDKE 96
           Y ++ L++   S   F  +   ++++++   
Sbjct: 56 VYRVNGLSRAPASSETFEHDGKKVTIASYFHS 87


>d2ex0a1 c.87.1.9 (A:26-412)
           Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteurella
           multocida [TaxId: 747]}
          Length = 387

 Score = 23.7 bits (51), Expect = 8.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 57  FSVPKNDEKYTISSLTKKIESDTD 80
           FS+PK    + I +  K+++S  D
Sbjct: 334 FSLPKEKISHIIFTSNKQVKSKED 357


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.124    0.354 

Gapped
Lambda     K      H
   0.267   0.0609    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 507,163
Number of extensions: 20487
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 8
Length of query: 162
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 83
Effective length of database: 1,322,926
Effective search space: 109802858
Effective search space used: 109802858
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 49 (22.9 bits)