HHsearch alignment of GI: 254780760 and MMDB domain: 2yv4_A_
>2yv4_A (A:) Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genomics, NPPSFA; 2.00A {Pyrococcus horikoshii OT3}
Probab=99.92 E-value=2.2e-26 Score=190.98 Aligned_cols=102 Identities=18% Similarity=0.289 Sum_probs=86.0
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 32233332100124531011101357770000020222356566517997599999999999899999999977998999
Q gi|254780760|r 219 TPQSPGMLKSHYAPRSQVRLRAIHVNPREALIRFGNVPIKNIENAIISLNLSKTGKLKEAAFNLFNYMKIADDSGASSIA 298 (330)
Q Consensus 219 ~~~SPG~~~~HYAP~~~V~L~~~~~~~~e~ll~~~~~~~~~~~~~~~~~~Ls~~gd~~eaA~nLY~~LR~lD~~~~~~I~ 298 (330)
+|+||||+|+||||+++|+|.+......+....++.+...... ..++++..+|++++|+|||+.||++|+.++++|+
T Consensus 1 AP~aPGmky~HYaP~~~~~l~~~~~~~~~~~~~vg~i~~~~~~---~~~~~~~~~d~~~~A~~Lf~~LR~~D~~~~~~I~ 77 (105)
T 2yv4_A 1 APNAEVIVVEGPREKVKGKITELVKELKERGKKVGVIGSESYN---ADEFFFLGSSVEEVAKNLFKALRYXDKAGVDVVI 77 (105)
T ss_dssp CCSSEEEEEEECHHHHHHHHHHHHHHHHHTTCCEEEEESSCTT---CSEEEECCSSHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC---CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9998789995880888999999999988539849999147657---7538976989999999999999998616999799
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9638887610899989998405832
Q gi|254780760|r 299 FSSIPNHGLGIAINNRLERAAAPRN 323 (330)
Q Consensus 299 ve~ip~~glg~AI~DRL~RAA~~r~ 323 (330)
+|.+|++|+|.||||||+|||++|-
T Consensus 78 ~e~~~~~g~g~Ai~nRL~kAA~~~i 102 (105)
T 2yv4_A 78 AEGVEERGLGLAVXNRLRKASGYKI 102 (105)
T ss_dssp EEEESGGGHHHHHHHHC---CCCEE
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 9818997718999999998656897