HHsearch results for GI: 254780760 and protein with PDBid: 1jcu_A
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=100.00 E-value=0 Score=376.10 Aligned_cols=196 Identities=26% Similarity=0.426 Sum_probs=178.4
Q ss_pred CEEECCCC----HHHHHHHHHHHHCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHC
Q ss_conf 94431799----99999999999759859990778000402799999999999970888106549996798997764200
Q gi|254780760|r 1 MQIMSITD----SNALRKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKKHASV 76 (330)
Q Consensus 1 m~~~~~~d----~~~i~~a~~~L~~G~~v~~PTeTvYGlg~~a~~~~av~~I~~~K~Rp~~~Pli~~v~~~~~~~~~~~~ 76 (330)
|.|++++. ++.|++|+++|++|++|+|||||||||||||+|++||+|||++|+|+.++|+++++++++++.+|+.+
T Consensus 1 m~i~~i~~~np~~~~i~~a~~~L~~G~vi~~PTdtvYgl~~~a~n~~Av~ki~~lK~R~~~kp~~~l~~~~~~~~~~~~~ 80 (208)
T 1jcu_A 1 MLIRKITRKNPSPDVLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPRFSRP 80 (208)
T ss_dssp CCSCCCCSSCCCCHHHHHHHHHHHTTCEEECCCSSSCEEEEETTSHHHHHHHHHHCCSCTTSCCEEECSCTTTSTTTEEC
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 97999088996999999999999779989998697303787389989999999863122458648883425666889888
Q ss_pred CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 5204689985058871886146787811655544457633224156-676664201421212343334854330177776
Q gi|254780760|r 77 DPLSLHLAKLFWPGPLTLVLDLLSTTDIHPLSTANLKTACFRVPCG-FTKKLIETYGHPLAIPSANRSGQISITNVKHIL 155 (330)
Q Consensus 77 ~~~~~~l~~~fwPGplT~il~~~~~~~i~~~~t~~~~tvavRiP~h-~~~~ll~~~~~Piaa~SAN~sG~~Spt~a~~v~ 155 (330)
++..++++++|||||+|+|++.+ ..++++++++.++||+|+|+| ++++|++.+ ||++||||+||++++++.+++.
T Consensus 81 ~~~~~~l~~~~~PgplT~i~~~~--~~~~~~~~~~~~tigvRip~~~~~~~L~~~~--Pl~~TSAN~sG~~~~~~~~ei~ 156 (208)
T 1jcu_A 81 SGDAMELMERILPGPYTVVLERN--ELIPDVITGGSSRVGIRVPDDEICRRIAARF--PVTATSANISGKPPSPRLEEIV 156 (208)
T ss_dssp CHHHHHHHHHSCSSSEEEEEEEC--SCCCHHHHTTTTEEEEECCSCHHHHHHHHHS--CEEEEECCSSSCCSCSCHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEECCCC--CCCCHHHCCCCCCEEEECCCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCHHHHH
T ss_conf 78999986312579832400234--5678645599751006546759999998418--9220235758999988889999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHH
Q ss_conf 644065542112766456676730699626982434424887888877
Q gi|254780760|r 156 SSSICKEIPLIIDGGISKIGLESTIVNVQCEKKVRILRPGGLEIETLK 203 (330)
Q Consensus 156 ~~~~~~~i~~ildgg~~~~GieSTiid~~~~~~~~IlR~G~i~~~~i~ 203 (330)
++|+ .+|+|+|+|.|..|.+|||||+++ ++++|+|+|+++.++|.
T Consensus 157 -~~~~-~vd~ild~g~~~~~~~STIvd~~~-~~~~IlR~G~i~~~~il 201 (208)
T 1jcu_A 157 -RDLD-AVDLVLDAGDCLDMEPSTVIDLTV-NPPRVLRRGKGPLDPVL 201 (208)
T ss_dssp -HHSS-SSEECCSSCCCSCSCCCEEECCCS-SSCCEEECCCSSCCCCC
T ss_pred -HHHC-CCCEEEECCCCCCCCCCEEEEEEC-CCEEEEEECCCCHHHHH
T ss_conf -9855-866899798678999988899459-94599982699666987