RPSBLAST alignment for GI: 254780760 and conserved domain: pfam01300
>gnl|CDD|144776 pfam01300, Sua5_yciO_yrdC, yrdC domain. This domain has been shown to preferentially bind to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. Length = 178
Score = 179 bits (456), Expect = 1e-45
Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 5/181 (2%)
Query: 17 EFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKKHAS- 75
E L G +A PT+TVYGL D+ N A+ RL EIK RP PL V+D+ +K++A
Sbjct: 1 EALRQGGIVAYPTDTVYGLGCDATNEEAVERLREIKGRPRDKPLAVMVADLEQLKEYADE 60
Query: 76 VDPLSLHLAKLFWPGPLTLVLDLLSTTDIHPLSTANLKTACFRVP-CGFTKKLIETYGHP 134
V+ +L LA+ FWPGP+TL+L S + + L T L T R+P + L+E G P
Sbjct: 61 VEEAALKLAERFWPGPITLILP-ASKSKLPKLVTPGLGTVGVRLPDHPLARLLLEALGEP 119
Query: 135 LAIPSANRSGQISITNVKHILSSSICKEIPLIIDGGISKIGLESTIVNVQCEKKVRILRP 194
L SAN SG+ S T+ + +L + + LI+DGG +G++ST+V++ + ILR
Sbjct: 120 LVATSANLSGEPSATDAEEVL-EELGGIVDLILDGGRIPVGVDSTVVDL-TDGPPEILRR 177
Query: 195 G 195
G
Sbjct: 178 G 178