HHsearch alignment for GI: 254780761 and conserved domain: TIGR00179

>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro: IPR003170 Members of this family are UDP-N-acetylenolpyruvoylglucosamine reductase enzymes, which are also called UDP-N-acetylmuramate dehydrogenases. This enzyme is responsible for the synthesis of UDP-N-acetylmuramic acid in bacterial cell wall biosynthesis and consequently provides an attractive target for the design of antibacterial agents. The crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase in the presence of its substrate, enolpyruvyl-UDP-N-acetylglucosamine, has been solved to 2.7 A resolution. The structure reveals a novel flavin binding motif, shows a striking alignment of the flavin with the substrate, and suggests a catalytic mechanism for the reduction of this enol ether . ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0009252 peptidoglycan biosynthetic process.
Probab=96.85  E-value=0.0024  Score=40.30  Aligned_cols=135  Identities=23%  Similarity=0.334  Sum_probs=102.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCC-CEEEEECCCCCCCCCCCCCCCEEEECCCC
Q ss_conf             76687589954998999999999987298299975887776540104888-66999763002774211237345511442
Q gi|254780761|r   39 YHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNR-KDIILSIKRMNRIRDIDLRSNTIAVDAGI  117 (473)
Q Consensus        39 ~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~-~~vvld~~~mn~il~id~~~~~v~veaGv  117 (473)
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~n~l---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~   84 (327)
T TIGR00179         9 IGGNARLLVVPKSLEELVNVLDNAKEEDLPLLILGGGSNLL---VLDEGKLGGVILNLGYGLDH-EEDEDGEYLTVGGGE   84 (327)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCEE---EECCCCHHHHHHHHHHHHHH-HCCCCCCEEEECCCC
T ss_conf             37632012300234789999865542174146752465135---41443000333333320011-103566667751554


Q ss_pred             CHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCC-CCCCCCCCCCC-CCCCCCEEE
Q ss_conf             0022221001232223443343211131122212356400011257-33344433234-666530211
Q gi|254780761|r  118 NLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGN-IRHLCLGIEAV-LPTGDIWNG  183 (473)
Q Consensus       118 ~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~-~~d~v~~~~vv-~~~G~i~~~  183 (473)
T Consensus        85 ~~~~~~~~~~~~~~~-gl~~~~~~pg~~g~~~~~n~g-----~~~~~~~~~~~~~~~~~~~~g~~~~~  146 (327)
T TIGR00179        85 NWHKLVKYALKNGLS-GLEFLAGLPGTLGGAVIMNAG-----AYGVELKEVLVKATVLELPDGKTEWL  146 (327)
T ss_pred             CHHHHHHHHHHCCCC-HHHHHHHCCCCCCCHHHHCCC-----CCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             378999988633731-014543055311320221034-----11134787776554201467752343