HHsearch alignment for GI: 254780761 and conserved domain: TIGR00387
>TIGR00387 glcD glycolate oxidase, subunit GlcD; InterPro: IPR004490 The glc locus of Escherichia coli encodes the subunits of glycolate oxidase and the glc regulator protein. The subunit GlcD is similar to that of several D-lactate dehydrogenases, including that of E. coli. Glycolate oxidase has been found to have some D-lactate dehydrogenase activity.; GO: 0008891 glycolate oxidase activity, 0009339 glycolate oxidase complex.
Probab=100.00 E-value=0 Score=734.96 Aligned_cols=418 Identities=31% Similarity=0.469 Sum_probs=368.7
Q ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEE-ECCCCCCCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf 995499899999999998729829997588777654010488866999-7630027742112373455114420022221
Q gi|254780761|r 46 VLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIIL-SIKRMNRIRDIDLRSNTIAVDAGINLFNVQK 124 (473)
Q Consensus 46 Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvl-d~~~mn~il~id~~~~~v~veaGv~~~~l~~ 124 (473)
T Consensus 1 Vv~P~n~eqv~~Ilk~C~e~ri~~vpRGaGTgLsGGalP~~g--gl~lsv~~~m~~ILeId~~n~~A~VqPGV~~~~~~~ 78 (437)
T TIGR00387 1 VVLPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGALPVEG--GLVLSVFKRMNKILEIDVVNLTAVVQPGVINLELEQ 78 (437)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHCCCCCCEEEECCCEEHHHHHH
T ss_conf 978885789999999874278747852688877665425677--302357788767640047888898747401388999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 00123222344334321113112221235640001125733344433234666530211220133223222333223465
Q gi|254780761|r 125 IAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSE 204 (473)
Q Consensus 125 ~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~Gse 204 (473)
T Consensus 79 ~V~~~~l~YpPDPsS~~~~tiGGNiaENaGG~r~lKYG~t~d~VlgLeVV~adGei~~~gg~~~kd~~GydLt~LfvGSE 158 (437)
T TIGR00387 79 AVEEHGLFYPPDPSSQIVSTIGGNIAENAGGVRGLKYGTTVDYVLGLEVVLADGEIIRIGGKTAKDVAGYDLTGLFVGSE 158 (437)
T ss_pred HHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHCC
T ss_conf 98737872488801101000476300377530121101122123333466367143211134146688623777887404
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH--HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 45431012799404675443210000135268999--9975102332222222245179999998614443411575321
Q gi|254780761|r 205 GTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQ--LLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSPLSDTSP 282 (473)
Q Consensus 205 GtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~--~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~~~~~~~ 282 (473)
T Consensus 159 GtLGi~Te~tlKllpkPe~~~~~lA~F~s~E~A~qt~aV~~iia-~~i~Pa~mEflDn~si~A~Ed~~~~gC--yP~~a~ 235 (437)
T TIGR00387 159 GTLGIVTEITLKLLPKPELKKVLLALFDSIEKAAQTLAVADIIA-AGIIPAGMEFLDNLSIKAVEDIVKIGC--YPVDAK 235 (437)
T ss_pred CHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHCCC--CCCCHH
T ss_conf 15799998998630678521342202268777732011224463-266104555532467899988874589--887864
Q ss_pred CEECCCCCCCCHHHHHH-HHHHHHHHHHCCC-CCCCCCCCCCCHH-HHHHHHHHCCCCCCC-CCCC----CCCCCCCCCH
Q ss_conf 10011135430689999-9999888863134-5653100158888-964433100122112-2235----6644442100
Q gi|254780761|r 283 WYILLEISSTETLERAQ-NIANTILATGFNK-KILTEWILPSLDE-EKNAIWCLRNNIPLA-QKRE----GRSIKHDISV 354 (473)
Q Consensus 283 ~~lli~~~g~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~lw~~R~~~~~~-~~~~----g~~~~~Dvav 354 (473)
T Consensus 236 a~Ll~e~dg~~~~Ve~~~~~~~~~~e~~~~~n~~a~~~~~Aq~E~n~~~~~~~~R~~A~~a~~~~~Gtkk~~~~~eD~tV 315 (437)
T TIGR00387 236 AILLVELDGVEEEVERDISALLEKIEKICKKNAGAVDVQIAQDEENERLKLWAGRRNAFKAASKLSGTKKPKYLIEDGTV 315 (437)
T ss_pred HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 45065415771478999999999999998621552024777636889999886228899999874055575525623300
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC----CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 1312899999999998863487----228999984498699998427788806899999999999999999981891899
Q gi|254780761|r 355 PIGQIPSFLQEVKKSVSSIFPK----TRIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYSVVLSYGGSIAA 430 (473)
Q Consensus 355 p~~~l~~~~~~v~~~l~~~~~~----~~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~ 430 (473)
T Consensus 316 PR~~Lp~~l~~I~~ia~Ky~~~~~ANF~i~~~gHaGDGNlHP~i~~d~~~--~~~-~er~e~~~~EI~e~a~~LGGtiSG 392 (437)
T TIGR00387 316 PRSKLPEVLKGIADIASKYDDLAVANFKIFIVGHAGDGNLHPLILTDEED--KGE-MERVEELGGEILELAIELGGTISG 392 (437)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEECCCCC--HHH-HHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 45677899999999997518634540267788741778754322237886--668-999999999999987222770553
Q ss_pred ECCCCHHHHH----HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 7355565688----8887317899999999988715377788876
Q gi|254780761|r 431 EHGIGQLHKK----RLEGILEPTEIKIMKKIKEIFDPAGIMNPGK 471 (473)
Q Consensus 431 eHGiG~~k~~----~~~~~~~~~~~~~l~~iK~~~DP~gilNPGk 471 (473)
T Consensus 393 EHGIG~~K~~Glem~m~~~f~~~~le~m~~~K~aFDP~NiLNPGK 437 (437)
T TIGR00387 393 EHGIGVEKAEGLEMFMPLKFNEKELETMRAIKKAFDPDNILNPGK 437 (437)
T ss_pred ECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 115465344542468675228568899999998609898888889