HHsearch alignment for GI: 254780761 and conserved domain: TIGR01679
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase; InterPro: IPR010032 This entry identifies a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (1.1.3.8 from EC) from rat and D-arabinono-1,4-lactone oxidase (1.1.3.37 from EC) from Saccharomyces cerevisiae..
Probab=99.94 E-value=3.7e-25 Score=177.34 Aligned_cols=394 Identities=18% Similarity=0.240 Sum_probs=233.1
Q ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 40136766875899549989999999999872982999758877765401048886699976300277421123734551
Q gi|254780761|r 34 EERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAV 113 (473)
Q Consensus 34 d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~v 113 (473)
T Consensus 3 NWsG~~~a~P~ai~~P~degELad~~~~A~~pGervR~VGsGHSFT~----la~tdGt~~sl~~l~g~v~~d~~~~~a~V 78 (426)
T TIGR01679 3 NWSGVQVAEPSAIVAPKDEGELADVVKVAAKPGERVRAVGSGHSFTD----LAKTDGTLVSLEKLEGVVDVDQQKDEAIV 78 (426)
T ss_pred CCCCCEECCCCEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCC----CCCCCCEEEECCCCCEEEEECCCCCEEEE
T ss_conf 78964452720011788601489999972388976654437765013----33668657873116504300289886899
Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 14420022221001232223443343211131122212356400011257333444332346665302112201332232
Q gi|254780761|r 114 DAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSR 193 (473)
Q Consensus 114 eaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G 193 (473)
T Consensus 79 ~aGtrLgaLgp~La~~g~gL~N-~gDid~QsigGAlgTATHGtG-~~~~a~h~~~~~lrlVt~~Gkv~d~-----~~~~d 151 (426)
T TIGR01679 79 KAGTRLGALGPLLAEKGRGLEN-LGDIDKQSIGGALGTATHGTG-VKLQALHARVVSLRLVTASGKVLDL-----SEADD 151 (426)
T ss_pred ECCCCCCCHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHCCCCCC-CCCCCCCEEEEEEEEECCCCCEEEC-----CCCCC
T ss_conf 5065214045899975145667-788660132111010215788-6333542067899998588707875-----56878
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC----CHHHHHHHHH
Q ss_conf 22333223465454310127994046754-432100001352689999975102332222222245----1799999986
Q gi|254780761|r 194 YDIRDLLIGSEGTLGIITGAVLRLLPYRT-GKQVAFIAVNSLEQALQLLQLSQKTAGSMLTAFELI----SNFILKLVVK 268 (473)
Q Consensus 194 ~dl~~l~~GseGtlGiITevtlrl~p~p~-~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~aiel~----d~~~~~~~~~ 268 (473)
T Consensus 152 ~~~~~AarVslGAlGViSqVtl~t~a~~rLrRr~w~~---p~~~~l~~~d~~~~~h----r~fEFy~~Pf~g~A~~it~d 224 (426)
T TIGR01679 152 QDIYLAARVSLGALGVISQVTLRTVALFRLRRRKWLR---PLEEALEKLDEFVDAH----RSFEFYVVPFAGKALTITSD 224 (426)
T ss_pred HHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHH---HHHHHHHHHHHHHHCC----CCCCEEEECCCCHHHHHHCC
T ss_conf 7799999888643010100110125452000277755---6999999998887425----77206861442103553113
Q ss_pred HCCCCCCCCCCCCCCEECCCCCCCCHHHHH-HHHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 144434115753211001113543068999-9999988886313456531001--5888896443310012211222356
Q gi|254780761|r 269 HIPNTFSPLSDTSPWYILLEISSTETLERA-QNIANTILATGFNKKILTEWIL--PSLDEEKNAIWCLRNNIPLAQKREG 345 (473)
Q Consensus 269 ~~~~~~~~~~~~~~~~lli~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~lw~~R~~~~~~~~~~g 345 (473)
T Consensus 225 ~sde~~~~tPGr~~------d~de~fln~~Lr~lr~~l~~~pslr~rl~~~~~~~~~se~~vd~~~kv-----~at~R~v 293 (426)
T TIGR01679 225 ESDEAAKATPGRQR------DDDEEFLNRALRLLRQTLAFLPSLRKRLAKALVAKVKSEDVVDEAYKV-----FATERKV 293 (426)
T ss_pred CCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH-----HHCCCCC
T ss_conf 66788888887887------665203578899998631025708999999987507851145534664-----3126873
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE--EEEECCC----------EEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 644442100131289999999999886348722899--9984498----------6999984277888068999999999
Q gi|254780761|r 346 RSIKHDISVPIGQIPSFLQEVKKSVSSIFPKTRIGL--FGHIGDG----------NIHFNVFPPTDENQDEFLSLHWNTI 413 (473)
Q Consensus 346 ~~~~~Dvavp~~~l~~~~~~v~~~l~~~~~~~~~~~--~gH~g~g----------~lh~~~~~~~~~~~~~~~~~~~~~i 413 (473)
T Consensus 294 rFnEMEyhlP~Eng~kAL~evi~l~e~r~p~v~FPiEVR~~ApDd~wLSpfY~rptcsiAv--H~ya~~d------f~~~ 365 (426)
T TIGR01679 294 RFNEMEYHLPVENGRKALEEVIELVEKRSPEVYFPIEVRSVAPDDAWLSPFYARPTCSIAV--HQYAASD------FESY 365 (426)
T ss_pred CCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEE--ECHHCCC------HHHH
T ss_conf 3230000078645478999999998533887215502300157732136243769531775--1200358------1689
Q ss_pred HHHHHHHHHHHCCCEEEECCCCHHHH---HHHHHHCCHHHHHHHHHHHHHHCCCCCC-CCC
Q ss_conf 99999999981891899735556568---8888731789999999998871537778-887
Q gi|254780761|r 414 NNIVYSVVLSYGGSIAAEHGIGQLHK---KRLEGILEPTEIKIMKKIKEIFDPAGIM-NPG 470 (473)
Q Consensus 414 ~~~~~~~~~~~gG~is~eHGiG~~k~---~~~~~~~~~~~~~~l~~iK~~~DP~gil-NPG 470 (473)
T Consensus 366 ~~a~EpIfrrY~GRP---H-WGK~H~l~aa~l~~~YPr--Wddf~aVR~dlDP~~rflnpY 420 (426)
T TIGR01679 366 FRAVEPIFRRYEGRP---H-WGKLHSLKAADLKELYPR--WDDFLAVRDDLDPDRRFLNPY 420 (426)
T ss_pred HHHHHHHHHHCCCCC---C-CCCCCCHHHHHHHHHCCC--HHHHHHHHHHCCCCCHHHCHH
T ss_conf 999989986357888---6-251113114679763785--047999843248240020426