HHsearch alignment for GI: 254780761 and conserved domain: TIGR03312
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=97.70 E-value=3.5e-05 Score=51.92 Aligned_cols=141 Identities=19% Similarity=0.274 Sum_probs=86.3
Q ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 99549989999999999872982999758877765401048886699976300277421123734551144200222210
Q gi|254780761|r 46 VLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKI 125 (473)
Q Consensus 46 Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~ 125 (473)
T Consensus 4 Y~rP~sl~EA~~lL~---~~~~~a~ilaGGtdL~~--~~~~~~~~~~i~l~~~-~L~~I~~~~~~l~IGA~~t~~~l~~~ 77 (257)
T TIGR03312 4 FFRPESTIQALELKK---RHTGVAVWFAGGSKLNA--TPTRTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN 77 (257)
T ss_pred CCCCCCHHHHHHHHH---HCCCCCEEECCCCCHHH--HHCCCCCCEEEECCCC-CCCCEEECCCEEEECCCCCHHHHHHC
T ss_conf 218898999999997---68998889737857453--3347777436772603-75608976999999541809999649
Q ss_pred CC-CCCCC----CCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCC-----CCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 01-23222----34433432111311222123564000112573334-----4433234666530211220133223222
Q gi|254780761|r 126 AE-KNHRL----FPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHL-----CLGIEAVLPTGDIWNGMHKLIKDNSRYD 195 (473)
Q Consensus 126 l~-~~g~~----~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~-----v~~~~vv~~~G~i~~~~~~~~~~~~G~d 195 (473)
T Consensus 78 ~~~~~~L~~a~~~i~~~qIRN~gTiGGnla~a~P---------~aD~~p~LlAl~A~v~l~~~~~-------------ip 135 (257)
T TIGR03312 78 ELTPAALKEALGFVYSRHIRNQATIGGEIAAFQS---------ESLLLPVLLALKATVVLANASQ-------------MD 135 (257)
T ss_pred CCCHHHHHHHHHHHCCHHHCCCEEEEEEECCCCC---------CHHHHHHHHHCCCEEEECCCCE-------------EE
T ss_conf 4423899999986557865121044346215787---------3588999997498999858968-------------87
Q ss_pred CCCCCCCCCCCCCCEEEEEEE
Q ss_conf 333223465454310127994
Q gi|254780761|r 196 IRDLLIGSEGTLGIITGAVLR 216 (473)
Q Consensus 196 l~~l~~GseGtlGiITevtlr 216 (473)
T Consensus 136 ~~dF~~g~~~--Eil~~I~iP 154 (257)
T TIGR03312 136 IEDYLASEQR--ELIVEVIIP 154 (257)
T ss_pred HHHHHCCCCC--EEEEEEEEC
T ss_conf 9997078998--089999964