HHsearch alignment for GI: 254780761 and conserved domain: pfam08031
>pfam08031 BBE Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyse the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine.
Probab=92.36 E-value=0.12 Score=29.75 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=22.5
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 88887317899999999988715377788
Q gi|254780761|r 440 KRLEGILEPTEIKIMKKIKEIFDPAGIMN 468 (473)
Q Consensus 440 ~~~~~~~~~~~~~~l~~iK~~~DP~gilN 468 (473)
T Consensus 12 ~~~~~yyG-~ny~rL~~iK~kyDP~n~F~ 39 (45)
T pfam08031 12 DWGEAYFG-GNYERLRKVKAKYDPDNVFR 39 (45)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHCCCCCCC
T ss_conf 79999999-79999999999879444557