HHSEARCH alignment of GI: 254780761 and SCOP domain: d1hska1

Alignment
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.96  E-value=1.5e-29  Score=202.04  Aligned_cols=193  Identities=20%  Similarity=0.323  Sum_probs=155.3

Q ss_pred             CHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEE
Q ss_conf             98999999973384418669899877313401367668758995499899999999998729829997588777654010
Q gi|254780761|r    5 SLDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIP   84 (473)
Q Consensus         5 ~~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p   84 (473)
                      +++++++|+.++++++|.+|+ .+..|++.   ...+.++++++|+|++|+++++++|+++++|++|+|+|||+.+.   
T Consensus         1 ~~~~~~~l~~~l~~~~i~~~~-~L~~~tt~---~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~---   73 (194)
T d1hska1           1 NKDIYQALQQLIPNEKIKVDE-PLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR---   73 (194)
T ss_dssp             CHHHHHHHHHHSCGGGEEEEE-EGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEEC---
T ss_pred             CHHHHHHHHHHCCCCCEEECC-CCHHCCEE---EECEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---
T ss_conf             978999998666836378278-40343271---12829889995199999999998756436536786055422357---


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCC-
Q ss_conf             4888669997630027742112373455114420022221001232223443343211131122212356400011257-
Q gi|254780761|r   85 RKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGN-  163 (473)
Q Consensus        85 ~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~-  163 (473)
                      ..+-.++|+++++|+++   +.++.+++||||+.+.++.+++.++|+. +.++.+...+||||+|++|+++     ||. 
T Consensus        74 d~~~~g~vi~l~~~~~~---~~~~~~v~~~aG~~~~~l~~~~~~~gl~-g~e~~~gipgtvGGai~mNaG~-----yG~e  144 (194)
T d1hska1          74 EGGIRGIVISLLSLDHI---EVSDDAIIAGSGAAIIDVSRVARDYALT-GLEFACGIPGSIGGAVYMNAGA-----YGGE  144 (194)
T ss_dssp             TTCEEEEEEECTTCCCE---EEETTEEEEETTSBHHHHHHHHHHTTEE-SCGGGTTCCSBHHHHHHHTCEE-----TTEE
T ss_pred             CCCCEEEEEEEECCCCC---CCCCCEEEEEECCCHHHHHHHHHHHCCC-CCCCCCCCCEEEHHHHHCCCCC-----CCCE
T ss_conf             78722399982022222---2469769998356317888999861034-3324277663345455525741-----6841


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf             33344433234666530211220133223222333223465454310127994046
Q gi|254780761|r  164 IRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLP  219 (473)
Q Consensus       164 ~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p  219 (473)
                      +.|+|.++++++++|++.+...    +...+.-++-.+..+  -.||++|||||.|
T Consensus       145 i~d~v~~v~~v~~~G~i~~l~~----~e~~f~YR~s~~~~~--~~iIl~a~f~L~P  194 (194)
T d1hska1         145 VKDCIDYALCVNEQGSLIKLTT----KELELDYRNSIIQKE--HLVVLEAAFTLAP  194 (194)
T ss_dssp             HHHHEEEEEEECTTSCEEEEET----TTTTCBTTBCHHHHT--TCEEEEEEEECEE
T ss_pred             EEEEEEEEEEECCCCCEEEEEH----HHCCCCCCCCCCCCC--CEEEEEEEEEEEC
T ss_conf             7889999999948998999878----992630777879999--9999999999979


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
species: Staphylococcus aureus [TaxId: 1280]