HHSEARCH alignment of GI: 254780761 and SCOP domain: d1jroa4

Alignment
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.12  E-value=1.4e-06  Score=57.82  Aligned_cols=103  Identities=16%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC
Q ss_conf             54998999999999987298299975887776540104888669997630027742112373455114420022221001
Q gi|254780761|r   48 LPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAE  127 (473)
Q Consensus        48 ~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~  127 (473)
                      .|.|.+|..++++- +. +..  +.+|||.+.-+.-........++|+++....-.|...+..++++|++++.++.+.+.
T Consensus         4 ~P~tl~e~~~l~~~-~p-~a~--~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~~~~   79 (167)
T d1jroa4           4 LPETSDALADWYLA-HP-EAT--LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAE   79 (167)
T ss_dssp             CCSSHHHHHHHHHH-CT-TCE--EESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHH-CC-CCE--EEECCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf             86559999999977-89-987--997577589886402247874670100144005775034212464002899987666


Q ss_pred             CCCCCCC------CCCCCCCCCCCHHHHHCCCC
Q ss_conf             2322234------43343211131122212356
Q gi|254780761|r  128 KNHRLFP------LSLPSEKYCHIGGNLATNAG  154 (473)
Q Consensus       128 ~~g~~~p------~~p~s~~~aTvGG~ia~~~~  154 (473)
                      .+.-.+.      -+++=...+||||++++.+.
T Consensus        80 ~~~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~p  112 (167)
T d1jroa4          80 GPHPALAGLLRRFASEQVRQVATIGGNIANGSP  112 (167)
T ss_dssp             TTCHHHHHHHHTSSCHHHHTTCBHHHHHHHCCT
T ss_pred             HHHHHHHHHHHHHCCHHHHEEEEECCCEEECCC
T ss_conf             367999999986348756225575252233352


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: CO dehydrogenase flavoprotein N-terminal domain-like
domain: Xanthine dehydrogenase chain A, domain 3
species: Rhodobacter capsulatus [TaxId: 1061]