HHSEARCH alignment of GI: 254780761 and SCOP domain: d1t3qc2

Alignment
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]}
Probab=97.64  E-value=3.9e-05  Score=48.75  Aligned_cols=108  Identities=16%  Similarity=0.146  Sum_probs=69.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf             87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r   42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN  121 (473)
Q Consensus        42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~  121 (473)
                      .+.-..+|.|.+|+.++++-   +.= ..+.+|||.+.-..-........++|++++.....|..++..++++|++++.+
T Consensus         4 ~~f~y~~P~sl~ea~~ll~~---~~~-a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~   79 (176)
T d1t3qc2           4 PAFSYRAPASLQEVIQVLAD---DPD-ARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR   79 (176)
T ss_dssp             CCCEEECCSSHHHHHHHHHH---CTT-CEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred             CCCEEECCCCHHHHHHHHHH---CCC-CEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHH
T ss_conf             88426488999999999976---899-87995478346656442038663337555302531660474122032003688


Q ss_pred             HHHHC--CCCC-------CCCCCCCCCCCCCCCHHHHHCCCC
Q ss_conf             22100--1232-------223443343211131122212356
Q gi|254780761|r  122 VQKIA--EKNH-------RLFPLSLPSEKYCHIGGNLATNAG  154 (473)
Q Consensus       122 l~~~l--~~~g-------~~~p~~p~s~~~aTvGG~ia~~~~  154 (473)
                      +...-  .++.       ..+ -+|+=...+||||+|++.+.
T Consensus        80 l~~~~~~~~~~p~l~~a~~~i-as~qIRn~aTiGGNi~~a~p  120 (176)
T d1t3qc2          80 NKTDPTVAKCVPILPKVLAHV-AHQAVRNRGTLGGSLAHADA  120 (176)
T ss_dssp             HHHCHHHHHHCTHHHHHHTTS-SCHHHHTTCBHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEEECCCCEECCC
T ss_conf             888765310156999999724-78125878751474100230


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: CO dehydrogenase flavoprotein N-terminal domain-like
domain: Quinoline 2-oxidoreductase medium subunit QorM
species: Pseudomonas putida [TaxId: 303]