HHSEARCH alignment of GI: 254780761 and SCOP domain: d1w1oa1

Alignment
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=97.59  E-value=0.00039  Score=42.46  Aligned_cols=115  Identities=12%  Similarity=0.090  Sum_probs=68.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHH-HHHHHCCCCEEEEEEEE------------CCC-EEEEE-EECCCCCCCHHHHHHHHHHH
Q ss_conf             44210013128999999999-98863487228999984------------498-69999-84277888068999999999
Q gi|254780761|r  349 KHDISVPIGQIPSFLQEVKK-SVSSIFPKTRIGLFGHI------------GDG-NIHFN-VFPPTDENQDEFLSLHWNTI  413 (473)
Q Consensus       349 ~~Dvavp~~~l~~~~~~v~~-~l~~~~~~~~~~~~gH~------------g~g-~lh~~-~~~~~~~~~~~~~~~~~~~i  413 (473)
                      +.++-||-+++.+|.+.+-+ ++........+.+|--.            =++ .+|.. ++.... ..+.  .....+-
T Consensus       152 WlNlfvP~s~I~~F~~~Vf~~il~~~~~~GpiLvYP~~~~kwd~~~s~v~PdeevfylvalL~sa~-~~~~--~~~l~~q  228 (289)
T d1w1oa1         152 WLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSV-APND--LARLQEQ  228 (289)
T ss_dssp             CEEEEEEGGGHHHHHHHHTTTTTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC----CH--HHHHHHH
T ss_pred             CEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCH--HHHHHHH
T ss_conf             567860245899999999984356668997089997251125788643079877899999954889-9625--9999999


Q ss_pred             HHHHHHHHHHHCCCE----EEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             999999999818918----9973555656888887317899999999988715377788876
Q gi|254780761|r  414 NNIVYSVVLSYGGSI----AAEHGIGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGK  471 (473)
Q Consensus       414 ~~~~~~~~~~~gG~i----s~eHGiG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGk  471 (473)
                      ++.+.+.+.+.|+.+    +|+    ..+..| ...+|+...+.+.+.|+.|||++||+||-
T Consensus       229 N~~il~~c~~aG~~~k~yl~~~----~t~~dW-~~HFG~~kW~~F~~~K~~yDP~~ILsPGQ  285 (289)
T d1w1oa1         229 NRRILRFCDLAGIQYKTYLARH----TDRSDW-VRHFGAAKWNRFVEMKNKYDPKRLLSPGQ  285 (289)
T ss_dssp             HHHHHHHHHHTTCCCEESSCCC----SSHHHH-HHHHCHHHHHHHHHHHHHHCTTCCBCGGG
T ss_pred             HHHHHHHHHHCCCCCEEECCCC----CCHHHH-HHHCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             9999999998399626867888----998999-98719116799999986079510158987


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Cytokinin dehydrogenase 1
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]