Query gi|254780761|ref|YP_003065174.1| probable FAD-dependent oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 473
No_of_seqs 138 out of 5990
Neff 9.1
Searched_HMMs 13730
Date Wed Jun 1 07:11:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780761.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wvfa2 d.145.1.1 (A:7-242) Fl 100.0 0 0 348.4 17.0 213 6-221 13-236 (236)
2 d1e8ga2 d.145.1.1 (A:6-273) Va 100.0 0 0 335.7 15.5 212 6-221 17-268 (268)
3 d1f0xa2 d.145.1.1 (A:9-273) D- 100.0 0 0 314.0 19.1 174 5-181 1-178 (265)
4 d1w1oa2 d.145.1.1 (A:40-245) C 100.0 0 0 307.3 14.7 195 17-220 4-206 (206)
5 d1f0xa1 d.58.32.2 (A:274-567) 100.0 1.4E-45 0 303.9 0.1 270 147-470 6-284 (294)
6 d1e8ga1 d.58.32.1 (A:274-560) 100.0 1.9E-37 1.4E-41 251.6 10.0 261 192-472 1-273 (287)
7 d2i0ka2 d.145.1.1 (A:58-273) C 100.0 2.9E-35 2.1E-39 237.9 10.7 180 34-219 22-215 (216)
8 d1wvfa1 d.58.32.1 (A:243-521) 100.0 5.4E-32 3.9E-36 217.4 16.9 237 225-472 4-271 (279)
9 d1hska1 d.145.1.2 (A:15-208) U 100.0 1.5E-29 1.1E-33 202.0 10.1 193 5-219 1-194 (194)
10 d1uxya1 d.145.1.2 (A:3-200) Ur 99.9 1.5E-21 1.1E-25 151.8 12.3 173 39-224 11-185 (198)
11 d1jroa4 d.145.1.3 (A:179-345) 98.1 1.4E-06 1E-10 57.8 4.9 103 48-154 4-112 (167)
12 d1ffvc2 d.145.1.3 (C:1-177) Ca 98.0 3.5E-06 2.5E-10 55.3 5.6 151 42-217 4-174 (177)
13 d1rm6b2 d.145.1.3 (B:1-216) 4- 98.0 1.9E-06 1.4E-10 56.9 4.3 105 43-153 6-120 (216)
14 d1v97a6 d.145.1.3 (A:192-414) 97.9 9E-06 6.6E-10 52.7 5.1 110 40-153 39-165 (223)
15 d1t3qc2 d.145.1.3 (C:1-176) Qu 97.6 3.9E-05 2.8E-09 48.7 5.5 108 42-154 4-120 (176)
16 d1w1oa1 d.58.32.4 (A:246-534) 97.6 0.00039 2.8E-08 42.5 10.0 115 349-471 152-285 (289)
17 d1n62c2 d.145.1.3 (C:1-177) Ca 97.6 2.6E-05 1.9E-09 49.8 3.6 153 42-219 4-176 (177)
18 d1x5oa1 d.58.7.1 (A:8-108) RNA 82.6 0.57 4.2E-05 22.6 3.5 57 185-245 24-80 (101)
19 d2plsa1 d.145.1.4 (A:345-428) 80.5 0.45 3.2E-05 23.2 2.3 47 104-153 2-48 (84)
20 d1no8a_ d.58.7.1 (A:) Nuclear 77.8 0.55 4E-05 22.7 2.1 57 185-245 6-62 (78)
21 d1jaka1 c.1.8.6 (A:151-506) be 77.6 0.97 7.1E-05 21.1 3.3 23 50-72 72-94 (356)
22 d1qbaa3 c.1.8.6 (A:338-780) Ba 75.7 1.2 8.6E-05 20.6 3.3 22 50-71 87-108 (443)
23 d1yhta1 c.1.8.6 (A:16-359) Dis 75.4 1.2 8.8E-05 20.5 3.3 23 50-72 77-99 (344)
24 d1nowa1 c.1.8.6 (A:200-552) be 75.0 1.3 9.2E-05 20.4 3.3 23 50-72 67-89 (353)
25 d2u2fa_ d.58.7.1 (A:) Splicing 74.8 1.2 8.8E-05 20.5 3.2 57 185-245 7-64 (85)
26 d1whxa_ d.58.7.1 (A:) Probable 74.2 0.72 5.2E-05 21.9 1.9 52 185-245 16-67 (111)
27 d2gjxa1 c.1.8.6 (A:167-528) be 72.1 1.6 0.00012 19.7 3.3 23 50-72 68-90 (362)
28 d2cqca1 d.58.7.1 (A:109-191) A 72.0 1.3 9.8E-05 20.2 2.9 57 185-245 15-72 (83)
29 d1owxa_ d.58.7.1 (A:) Lupus LA 71.7 1.7 0.00013 19.5 3.4 60 176-244 8-68 (113)
30 d1fxla2 d.58.7.1 (A:119-203) H 71.2 1.5 0.00011 19.9 3.1 57 185-245 12-69 (85)
31 d1b7fa2 d.58.7.1 (A:205-289) S 70.6 1.7 0.00012 19.7 3.1 57 185-245 12-69 (85)
32 d1x4ea1 d.58.7.1 (A:8-79) RNA- 69.8 2.6 0.00019 18.5 3.9 56 186-245 5-61 (72)
33 d2cpha1 d.58.7.1 (A:454-547) P 69.5 1.2 9E-05 20.5 2.2 56 185-244 14-71 (94)
34 d2cpza1 d.58.7.1 (A:383-484) C 69.3 2.6 0.00019 18.5 3.8 57 185-245 24-81 (102)
35 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 69.2 1.9 0.00014 19.2 3.2 57 185-245 13-70 (93)
36 d2cq0a1 d.58.7.1 (A:231-320) E 69.2 2.5 0.00018 18.5 3.8 57 185-245 14-71 (90)
37 d3deda1 d.145.1.4 (A:341-427) 68.7 1.5 0.00011 20.0 2.5 44 107-153 7-51 (87)
38 d2cpia1 d.58.7.1 (A:101-189) E 68.7 3 0.00022 18.1 4.4 57 185-245 14-77 (89)
39 d1cvja1 d.58.7.1 (A:11-90) Pol 68.3 1.6 0.00012 19.7 2.7 56 186-245 7-63 (80)
40 d1x4aa1 d.58.7.1 (A:9-103) Spl 67.9 1.9 0.00014 19.2 3.0 55 185-245 20-74 (95)
41 d1zh5a2 d.58.7.1 (A:105-189) L 67.4 1.8 0.00013 19.4 2.8 54 185-242 12-65 (85)
42 d1l0ba2 c.15.1.3 (A:1705-1801) 66.9 3.2 0.00023 17.9 4.4 63 3-73 15-77 (97)
43 d1rk8a_ d.58.7.1 (A:) RNA-bind 66.6 2.2 0.00016 18.9 3.1 57 185-245 13-70 (88)
44 d2cq3a1 d.58.7.1 (A:110-202) R 66.4 2.6 0.00019 18.5 3.4 56 185-245 17-72 (93)
45 d1uawa_ d.58.7.1 (A:) Musashi- 66.2 2 0.00015 19.1 2.8 54 185-242 6-60 (77)
46 d1fxla1 d.58.7.1 (A:37-118) Hu 66.0 2.1 0.00015 19.1 2.8 57 185-245 8-65 (82)
47 d1wexa_ d.58.7.1 (A:) Heteroge 65.7 1.9 0.00014 19.3 2.6 51 185-244 21-71 (104)
48 d2cqga1 d.58.7.1 (A:96-185) TA 65.5 2.3 0.00017 18.8 3.0 55 185-243 14-69 (90)
49 d2cpja1 d.58.7.1 (A:65-150) No 64.9 2.1 0.00015 19.0 2.7 52 185-245 14-65 (86)
50 d2cqda1 d.58.7.1 (A:1-103) RNA 64.1 1.8 0.00013 19.4 2.3 56 185-244 16-72 (103)
51 d2p4pa1 d.145.1.4 (A:1-82) Hyp 64.1 2.2 0.00016 18.9 2.6 42 106-152 3-44 (82)
52 d2cqia1 d.58.7.1 (A:1-90) Nucl 64.0 1.9 0.00014 19.3 2.3 56 185-245 14-69 (90)
53 d1weza_ d.58.7.1 (A:) Heteroge 63.8 3.6 0.00026 17.6 3.7 60 177-242 14-73 (102)
54 d1cvja2 d.58.7.1 (A:91-179) Po 63.3 1.5 0.00011 19.9 1.7 55 185-244 14-68 (89)
55 d1ik6a1 c.36.1.7 (A:1-191) E1- 63.1 2.9 0.00021 18.1 3.1 10 423-432 168-177 (191)
56 d2disa1 d.58.7.1 (A:8-103) Hyp 62.2 1.3 9.8E-05 20.2 1.3 57 185-245 7-66 (96)
57 d2ghpa2 d.58.7.1 (A:41-115) U4 62.2 3 0.00022 18.1 3.0 53 185-242 6-58 (75)
58 d2o1ra1 d.145.1.4 (A:1-78) Hyp 61.4 2 0.00015 19.1 2.1 40 107-153 4-43 (78)
59 d2cpfa1 d.58.7.1 (A:362-446) P 61.4 2.3 0.00017 18.7 2.4 56 186-245 5-64 (85)
60 d1b7fa1 d.58.7.1 (A:123-204) S 59.8 2.1 0.00015 19.0 1.9 57 185-245 8-65 (82)
61 d1whwa_ d.58.7.1 (A:) Probable 59.8 2.4 0.00018 18.6 2.3 57 185-245 14-71 (99)
62 d1x4ba1 d.58.7.1 (A:8-110) Het 59.8 3 0.00022 18.0 2.7 54 185-242 26-80 (103)
63 d1p1ta_ d.58.7.1 (A:) Cleavage 59.2 2.5 0.00018 18.6 2.2 56 186-245 15-71 (104)
64 d2cqba1 d.58.7.1 (A:1-89) Pept 58.7 2.5 0.00018 18.5 2.2 57 185-245 11-68 (89)
65 d2adba1 d.58.7.1 (A:177-284) P 58.6 2.8 0.00021 18.2 2.4 55 185-246 13-67 (108)
66 d2adca2 d.58.7.1 (A:444-531) P 58.4 3.2 0.00023 17.8 2.7 55 185-246 16-70 (88)
67 d2f9da1 d.58.7.1 (A:12-125) Pr 58.0 3.6 0.00026 17.5 2.9 55 185-245 13-67 (114)
68 d1hd0a_ d.58.7.1 (A:) Heteroge 57.8 2.6 0.00019 18.4 2.1 53 186-242 6-59 (75)
69 d2cqpa1 d.58.7.1 (A:917-1002) 57.3 4 0.00029 17.2 3.0 57 185-245 15-72 (86)
70 d2oaia1 d.145.1.4 (A:5-91) Hem 57.1 2.4 0.00017 18.7 1.8 43 106-152 8-50 (87)
71 d1wf2a_ d.58.7.1 (A:) Heteroge 57.0 3.3 0.00024 17.8 2.5 45 190-245 27-71 (98)
72 d2rk5a1 d.145.1.4 (A:5-88) Put 56.9 2.8 0.0002 18.2 2.2 39 107-152 4-42 (84)
73 d2b0ga1 d.58.7.1 (A:1-83) Spli 56.7 3.9 0.00029 17.3 2.9 53 185-245 14-66 (83)
74 d1u6fa1 d.58.7.1 (A:1-139) RNA 56.6 2.6 0.00019 18.4 2.0 57 185-245 48-105 (139)
75 d2cpya1 d.58.7.1 (A:536-638) R 56.3 5 0.00036 16.7 3.7 54 185-242 14-68 (103)
76 d1x5ua1 d.58.7.1 (A:7-99) Spli 56.1 3.2 0.00023 17.9 2.3 57 185-245 15-72 (93)
77 d2cq2a1 d.58.7.1 (A:25-125) Al 56.0 1.9 0.00014 19.3 1.2 51 186-245 27-77 (101)
78 d1wg4a_ d.58.7.1 (A:) Splicing 55.2 4.2 0.00031 17.1 2.8 51 185-245 21-71 (98)
79 d3begb1 d.58.7.1 (B:121-207) S 53.9 4.7 0.00035 16.8 2.9 51 185-245 6-56 (87)
80 d1x5sa1 d.58.7.1 (A:8-97) Cold 53.1 3.3 0.00024 17.8 2.0 57 185-245 11-68 (90)
81 d2cq4a1 d.58.7.1 (A:132-232) R 52.0 5.2 0.00038 16.6 2.9 54 185-242 24-78 (101)
82 d2p13a1 d.145.1.4 (A:431-515) 51.4 3.8 0.00028 17.4 2.1 42 107-153 9-50 (85)
83 d1x4da1 d.58.7.1 (A:8-96) Matr 51.4 5.9 0.00043 16.2 3.2 51 186-245 15-66 (89)
84 d1x4ha1 d.58.7.1 (A:8-105) RNA 51.0 4.3 0.00031 17.1 2.3 57 185-245 14-71 (98)
85 d2p3ha1 d.145.1.4 (A:5-102) Un 50.0 4.2 0.00031 17.1 2.2 40 107-153 7-46 (98)
86 d2cq1a1 d.58.7.1 (A:51-138) Po 49.6 6.3 0.00046 16.0 3.2 51 185-244 14-64 (88)
87 d2r2za1 d.145.1.4 (A:5-88) Put 48.9 4.4 0.00032 17.0 2.1 39 107-152 7-45 (84)
88 d2nqwa1 d.145.1.4 (A:4-90) Hyp 48.8 3 0.00022 18.0 1.3 44 107-152 7-50 (87)
89 d2plia1 d.145.1.4 (A:5-88) Unc 48.3 4.7 0.00034 16.8 2.2 43 101-152 5-47 (84)
90 d1x5ta1 d.58.7.1 (A:8-90) Spli 48.0 3.8 0.00028 17.4 1.7 57 185-245 4-62 (83)
91 d2ghpa1 d.58.7.1 (A:116-196) U 46.9 3.9 0.00029 17.3 1.6 57 185-245 7-64 (81)
92 d1wg5a_ d.58.7.1 (A:) Heteroge 46.5 5.8 0.00042 16.2 2.4 54 185-242 21-75 (104)
93 d2cqha1 d.58.7.1 (A:2-81) IGF- 46.4 2.5 0.00018 18.5 0.6 52 185-245 7-58 (80)
94 d1x0fa1 d.58.7.1 (A:183-257) N 46.1 2.8 0.0002 18.2 0.7 54 185-242 5-59 (75)
95 d1u1qa_ d.58.7.1 (A:) Nuclear 45.2 7.4 0.00054 15.6 2.8 50 188-241 106-156 (183)
96 d1vhca_ c.1.10.1 (A:) Hypothet 44.9 6.6 0.00048 15.9 2.5 75 44-137 17-93 (212)
97 d2bz2a1 d.58.7.1 (A:35-113) Ne 44.7 5.9 0.00043 16.2 2.2 45 192-245 16-60 (79)
98 d1wg1a_ d.58.7.1 (A:) Probable 43.9 3.6 0.00026 17.6 1.0 51 185-245 11-61 (88)
99 d1whya_ d.58.7.1 (A:) Putative 43.1 7.2 0.00052 15.7 2.5 52 185-245 23-74 (97)
100 d2msta_ d.58.7.1 (A:) Neural R 42.6 4.6 0.00033 16.9 1.4 54 185-242 5-59 (75)
101 d1fjeb1 d.58.7.1 (B:1-91) Nucl 42.4 1.2 8.6E-05 20.6 -1.6 54 185-242 19-72 (91)
102 d1l3ka1 d.58.7.1 (A:8-91) Nucl 41.9 8.3 0.00061 15.3 2.9 54 185-242 12-66 (84)
103 d2cpda1 d.58.7.1 (A:223-308) A 41.2 6 0.00044 16.2 1.8 52 185-245 14-65 (86)
104 d1x4ga1 d.58.7.1 (A:8-103) Nuc 41.1 5.9 0.00043 16.2 1.8 51 186-245 25-75 (96)
105 d1l3ka2 d.58.7.1 (A:103-181) N 40.7 8.7 0.00063 15.1 3.1 54 185-242 8-62 (79)
106 d1weya_ d.58.7.1 (A:) Calcipre 40.3 6.2 0.00045 16.1 1.8 41 196-245 27-67 (104)
107 d1wbha1 c.1.10.1 (A:1-213) KDP 40.1 8.9 0.00065 15.1 2.9 74 45-138 19-95 (213)
108 d1mxsa_ c.1.10.1 (A:) KDPG ald 39.8 9 0.00065 15.1 3.5 28 44-71 20-47 (216)
109 d1pixa3 c.14.1.4 (A:288-586) G 37.0 9.9 0.00072 14.8 3.6 26 10-35 19-45 (299)
110 d1eh9a3 c.1.8.1 (A:91-490) Gly 36.2 9.1 0.00066 15.0 2.1 59 10-71 36-96 (400)
111 d2cpea1 d.58.7.1 (A:353-453) R 35.8 5.4 0.0004 16.4 0.9 57 185-245 14-79 (101)
112 d1xnya2 c.14.1.4 (A:268-530) P 35.7 9.8 0.00071 14.8 2.2 23 48-70 82-104 (263)
113 d2ghpa3 d.58.7.1 (A:206-291) U 34.9 8.8 0.00064 15.1 1.9 53 186-242 11-66 (86)
114 d1fjca_ d.58.7.1 (A:) Nucleoli 33.4 10 0.00074 14.7 2.0 53 185-245 22-74 (96)
115 d1nu4a_ d.58.7.1 (A:) Spliceso 33.2 6 0.00044 16.2 0.8 58 186-245 10-67 (91)
116 d2o3ga1 d.145.1.4 (A:180-255) 32.2 9.8 0.00071 14.8 1.7 38 110-152 2-39 (76)
117 d2adca1 d.58.7.1 (A:335-443) P 31.0 12 0.0009 14.2 2.8 48 190-245 14-61 (109)
118 d1wf0a_ d.58.7.1 (A:) TAR DNA- 30.6 7.1 0.00052 15.7 0.8 50 185-242 11-60 (88)
119 d1wi6a1 d.58.7.1 (A:69-143) Ri 30.0 12 0.00085 14.3 1.8 51 185-245 4-54 (75)
120 d1wi8a_ d.58.7.1 (A:) Eukaryot 29.9 13 0.00094 14.1 2.6 52 185-241 21-74 (104)
121 d2dita1 d.58.7.1 (A:8-106) HIV 28.9 13 0.00098 14.0 2.4 38 205-245 41-78 (99)
122 d2cpxa1 d.58.7.1 (A:291-392) R 27.9 4.7 0.00034 16.8 -0.5 57 185-245 24-81 (102)
123 d1wa3a1 c.1.10.1 (A:2-203) KDP 27.7 14 0.001 13.8 4.3 27 45-71 13-39 (202)
124 d2p0la1 d.104.1.3 (A:4-272) Li 27.3 14 0.001 13.8 5.2 38 37-75 47-87 (269)
125 d1x4fa1 d.58.7.1 (A:8-106) Mat 26.4 15 0.0011 13.7 3.0 50 186-244 25-75 (99)
126 d1di6a_ c.57.1.1 (A:) MogA {Es 26.2 15 0.0011 13.7 4.8 35 45-79 43-78 (190)
127 d2z67a1 c.67.1.9 (A:1-434) Sel 25.7 15 0.0011 13.6 2.5 13 49-61 42-54 (434)
128 d1i8ta1 c.4.1.3 (A:1-244,A:314 24.2 16 0.0012 13.4 1.9 51 110-163 4-55 (298)
129 d1ud2a2 c.1.8.1 (A:1-390) Bact 22.4 18 0.0013 13.2 2.8 26 46-71 72-99 (390)
130 d1wela1 d.58.7.1 (A:412-523) R 22.2 18 0.0013 13.2 3.8 54 185-242 24-78 (112)
No 1
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=100.00 E-value=0 Score=348.44 Aligned_cols=213 Identities=21% Similarity=0.310 Sum_probs=184.7
Q ss_pred HHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCC--CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-
Q ss_conf 899999997338441866989987731340136--76687589954998999999999987298299975887776540-
Q gi|254780761|r 6 LDLIQRFISIVGSEGILDDQKLISPYLTEERKI--YHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQ- 82 (473)
Q Consensus 6 ~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~--~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~- 82 (473)
..++++|+++||+++|++|++++.+|++|+... +...|.+||+|+|++||+++|++|+++++|++++|+|+|+.++.
T Consensus 13 ~~~v~~l~~ivG~~~V~~~~~~~~~y~~d~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~g~G~s~~~g~~ 92 (236)
T d1wvfa2 13 NKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSA 92 (236)
T ss_dssp HHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTT
T ss_pred HHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
T ss_conf 99999999972976399889999777276320135676888899569999999999998717941100234444321112
Q ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH-HCCCCCCHHHHC
Q ss_conf 1048886699976300277421123734551144200222210012322234433432111311222-123564000112
Q gi|254780761|r 83 IPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNL-ATNAGGTAVLSY 161 (473)
Q Consensus 83 ~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~i-a~~~~G~~s~~y 161 (473)
.|. ..++|+|||++||+|+++|+++++|+||||++|.+|+++|+++|+.+|++|+. .+|+||.+ +++++|+++.+|
T Consensus 93 ~~~-~~~~ividl~~mn~i~~id~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~~~--~~~~gG~i~~~~~~G~~~~~y 169 (236)
T d1wvfa2 93 APV-QRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSA--PSAIAGPVGNTMDRGVGYTPY 169 (236)
T ss_dssp SCS-STTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCS--SCTTCCHHHHHHTTCBCSSTT
T ss_pred CCC-CCEEEEEECCCCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf 355-51489860110221012103331010113444332578876421242112222--232100110011122221223
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-------CCCCCCCCEEEEEEEECCCC
Q ss_conf 5733344433234666530211220133223222333223-------46545431012799404675
Q gi|254780761|r 162 GNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLI-------GSEGTLGIITGAVLRLLPYR 221 (473)
Q Consensus 162 G~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~-------GseGtlGiITevtlrl~p~p 221 (473)
|.+.|+|+++|+|+|||+|++++.+..++..++++.+... ||||||||||++||||+|+|
T Consensus 170 G~~~d~v~~levVl~~G~iv~~~~~~~~~~~~~~~~~~~~G~~~~~l~SeGtlGIIt~~tlkl~P~P 236 (236)
T d1wvfa2 170 GEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP 236 (236)
T ss_dssp CBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECC
T ss_pred CCCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
T ss_conf 3333211006999289819980896678866788974686865123656462487899999987289
No 2
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=100.00 E-value=0 Score=335.69 Aligned_cols=212 Identities=21% Similarity=0.261 Sum_probs=176.9
Q ss_pred HHHHHHHHHHCCCCCEECCHHHHHHHHCCCCC------------CCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 89999999733844186698998773134013------------676687589954998999999999987298299975
Q gi|254780761|r 6 LDLIQRFISIVGSEGILDDQKLISPYLTEERK------------IYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQG 73 (473)
Q Consensus 6 ~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~------------~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prG 73 (473)
.+++++|++++|+++|+++......+..++.. .+...|++||+|+|++||+++|++|+++++||+|||
T Consensus 17 ~~~i~~L~~ilg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~g 96 (268)
T d1e8ga2 17 NEFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPIS 96 (268)
T ss_dssp HHHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECC
T ss_conf 99999999985923366045675430354334333436100144436688889957989999999999998399878415
Q ss_pred CCCCC--CCCCEECCCCCEEEEECCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCC--CCCCCCCCCHHH
Q ss_conf 88777--6540104888669997630-027742112373455114420022221001232223443--343211131122
Q gi|254780761|r 74 GNTGL--VGGQIPRKNRKDIILSIKR-MNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLS--LPSEKYCHIGGN 148 (473)
Q Consensus 74 ggt~~--~G~~~p~~~~~~vvld~~~-mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~--p~s~~~aTvGG~ 148 (473)
+|++. .|++.+. .++|+|||++ ||+|++||+++++++||||++|.+|+++|+++|+.+|+. +++...+++||+
T Consensus 97 ~G~~~~~~~~~~~~--~~~ividls~~mn~i~~id~~~~~~~v~aGv~~~~l~~~l~~~G~~~~~~~~~~~~~~~~i~g~ 174 (268)
T d1e8ga2 97 IGRNSGYGGAAPRV--SGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGN 174 (268)
T ss_dssp SCCCTTTTTTCCSS--TTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHH
T ss_pred CCCCCCCCCCCCCC--CCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
T ss_conf 64555653124446--7750433066532321114543011120334058888989877653023332234454147401
Q ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC-------------CCCCCCCCCCCCC----------CCCCC
Q ss_conf 212356400011257333444332346665302112201-------------3322322233322----------34654
Q gi|254780761|r 149 LATNAGGTAVLSYGNIRHLCLGIEAVLPTGDIWNGMHKL-------------IKDNSRYDIRDLL----------IGSEG 205 (473)
Q Consensus 149 ia~~~~G~~s~~yG~~~d~v~~~~vv~~~G~i~~~~~~~-------------~~~~~G~dl~~l~----------~GseG 205 (473)
++++ |.++.+||.++|+|+++|+|+|||+|++++... .++..|+++.++| +||||
T Consensus 175 ~~~~--G~~~~~yG~~~d~v~~~~vV~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~g~~l~~igSeG 252 (268)
T d1e8ga2 175 AVER--GVGYTPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQS 252 (268)
T ss_dssp HHTT--CBCSSTTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSS
T ss_pred ECCC--CCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 0100--25641135311222328999489828983774444303332025433334421589885213674413475664
Q ss_pred CCCCEEEEEEEECCCC
Q ss_conf 5431012799404675
Q gi|254780761|r 206 TLGIITGAVLRLLPYR 221 (473)
Q Consensus 206 tlGiITevtlrl~p~p 221 (473)
||||||++||||+|+|
T Consensus 253 tlGiIT~~tlrl~P~P 268 (268)
T d1e8ga2 253 NMGIVTKIGIWLMPNP 268 (268)
T ss_dssp SSEEEEEEEEECEECC
T ss_pred EEEEEEEEEEEEECCC
T ss_conf 5789999999986599
No 3
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=314.05 Aligned_cols=174 Identities=22% Similarity=0.307 Sum_probs=156.3
Q ss_pred CHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEE
Q ss_conf 98999999973384418669899877313401367668758995499899999999998729829997588777654010
Q gi|254780761|r 5 SLDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIP 84 (473)
Q Consensus 5 ~~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p 84 (473)
+++++++|++|||+++|++|+.++..|++||+ .|++.|.+||+|+|++||+++|++|+++++||+|||||||++||++|
T Consensus 1 n~~ll~~L~~ivG~~~Vltd~~~~~~ys~d~s-~~~~~p~aVV~P~s~~eV~~iv~~a~~~~~pv~~rGgGTsl~Gg~~p 79 (265)
T d1f0xa2 1 NKAFLNELARLVGSSHLLTDPAKTARYRKGFR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTP 79 (265)
T ss_dssp CHHHHHHHHHHHCGGGEECCHHHHHHHHBCSS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSC
T ss_pred CHHHHHHHHHHCCCCCEEECHHHHHHHHCCCC-CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
T ss_conf 98999999986593309848899878606531-36788778995898999999999998504665402266331045356
Q ss_pred CCC---CCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCC-CCCCCCCCCCCHHHHHCCCCCCHHHH
Q ss_conf 488---86699976300277421123734551144200222210012322234-43343211131122212356400011
Q gi|254780761|r 85 RKN---RKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFP-LSLPSEKYCHIGGNLATNAGGTAVLS 160 (473)
Q Consensus 85 ~~~---~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p-~~p~s~~~aTvGG~ia~~~~G~~s~~ 160 (473)
..+ ...|++|+++||+|+.+| ++++++||||+++.+|+++|+++|++|| ++|+|...|||||+||+|++|.++.|
T Consensus 80 ~~g~~~~~~vv~~~~~m~~i~~~~-~~~~v~v~pGv~~~~L~~~l~~~g~~~~~~~~~s~~~atiGG~ia~na~G~~~~r 158 (265)
T d1f0xa2 80 NGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQR 158 (265)
T ss_dssp CBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTS
T ss_pred CCCCCCCCEEEEECCCCCCCEECC-CCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEE
T ss_conf 643456541356545656522035-5453699851418999998886699334688851106231134543898763577
Q ss_pred CCCCCCCCCCCCCCCCCCCCE
Q ss_conf 257333444332346665302
Q gi|254780761|r 161 YGNIRHLCLGIEAVLPTGDIW 181 (473)
Q Consensus 161 yG~~~d~v~~~~vv~~~G~i~ 181 (473)
|.+.++++.+.+|+++|++.
T Consensus 159 -g~~~~~~~~~~~v~~~G~~~ 178 (265)
T d1f0xa2 159 -GPAYTEMSLFARINEDGKLT 178 (265)
T ss_dssp -CSSCCSCEEEEEECTTSCEE
T ss_pred -CCCHHHHHHHHHHCCCCCEE
T ss_conf -56133568876332589568
No 4
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00 E-value=0 Score=307.33 Aligned_cols=195 Identities=17% Similarity=0.229 Sum_probs=178.9
Q ss_pred CCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCCCCCCCCEECCCCCEEEE
Q ss_conf 8441866989987731340136766875899549989999999999872---9829997588777654010488866999
Q gi|254780761|r 17 GSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATET---NTSITPQGGNTGLVGGQIPRKNRKDIIL 93 (473)
Q Consensus 17 g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~---~i~v~prGggt~~~G~~~p~~~~~~vvl 93 (473)
.+..|.||+..+.+|++|+.++++..|.+|++|+|++||+++|++|+++ ++||.+||+|+|..|++.. .++|+|
T Consensus 4 ~~g~v~td~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~~---~~~ivi 80 (206)
T d1w1oa2 4 LDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFA---PGGVVV 80 (206)
T ss_dssp TTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCC---TTSEEE
T ss_pred CCCEEECCHHHHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC---CCCEEE
T ss_conf 79679829888556378745672569999997698999999999998578998479998999784657404---797733
Q ss_pred ECCCCCCC-----CCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCC
Q ss_conf 76300277-----4211237345511442002222100123222344334321113112221235640001125733344
Q gi|254780761|r 94 SIKRMNRI-----RDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLC 168 (473)
Q Consensus 94 d~~~mn~i-----l~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v 168 (473)
||++||+| +++|++..+++||||++|.+|+++|+++|+.+| .+++...+||||+++++++|..+.+||...|+|
T Consensus 81 dl~~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~-~~~~~~~~tvGG~i~~~g~g~~s~~~G~~~d~v 159 (206)
T d1w1oa2 81 NMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPR-SWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV 159 (206)
T ss_dssp EGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEES-CCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE
T ss_pred ECCCCCEEEECEEEEEECCCCEEEEECCEEHHHHHHHHHCCCCCCC-CCCCCCCEEEEEEECCCCCEECCCCCCCEEEEE
T ss_conf 1023432320214788348978999713462443323321332244-578568347764310234101133445403113
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 4332346665302112201332232223332234654543101279940467
Q gi|254780761|r 169 LGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY 220 (473)
Q Consensus 169 ~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~ 220 (473)
+++|+|+|+|+++++.. ..+|||.+++.||+|+|||||++||||+|.
T Consensus 160 ~~~evV~~~G~~~~~s~-----~~~~dl~~a~~g~~G~~Giit~~tl~l~PA 206 (206)
T d1w1oa2 160 LEMDVITGHGEMVTCSK-----QLNADLFDAVLGGLGQFGVITRARIAVEPA 206 (206)
T ss_dssp EEEEEEETTSCEEEEES-----SSSHHHHHHHTTCTTCSEEEEEEEEEEEEC
T ss_pred EEEEEECCCCCEEEECC-----CCCHHHHHHHHHCCCCCEEEEEEEEEEECC
T ss_conf 47899948995999889-----899789978863788028579999999859
No 5
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.4e-45 Score=303.90 Aligned_cols=270 Identities=19% Similarity=0.161 Sum_probs=198.7
Q ss_pred HHHHCCCCCCHHHHCCCCCCCCCCCCCCCCC-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
Q ss_conf 2221235640001125733344433234666-530211220133223222333223465454310127994046754432
Q gi|254780761|r 147 GNLATNAGGTAVLSYGNIRHLCLGIEAVLPT-GDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQ 225 (473)
Q Consensus 147 G~ia~~~~G~~s~~yG~~~d~v~~~~vv~~~-G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~ 225 (473)
.||+||- ..+||.+|++|++.++++|+ ||++.++....++.+||| +.|++|||||+|++|+++||+.|.+....
T Consensus 6 fyigtn~----~~~l~~iR~~vL~~~~~LP~sGE~~h~~~~~~~~~~G~d-t~l~IgseGT~~i~t~~~lK~~~~~~~~~ 80 (294)
T d1f0xa1 6 FYIGTNQ----PEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKD-TFLMIDKLGTDKMPFFFNLKGRTDAMLEK 80 (294)
T ss_dssp EEEEESC----HHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC-----------------------------------
T ss_pred EEEECCC----HHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9980798----899999999997344358866134535303788887588-99999883343067999987311677767
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHH
Q ss_conf 10000135268999997510233222222224517999999861444341157532110011135430689999999988
Q gi|254780761|r 226 VAFIAVNSLEQALQLLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSPLSDTSPWYILLEISSTETLERAQNIANTI 305 (473)
Q Consensus 226 ~~~~~f~~~~~a~~~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~g~~~~~~~~~~~~~~ 305 (473)
+.++.+...+.+.+++..+. .++.+....++.+...+++++++++....+ .....+.+
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~---------------------~~~l~~~~~~~~~~~~~~llie~~~~~~~e-~~~~le~~ 138 (294)
T d1f0xa1 81 VKFFRPHFTDRAMQKFGHLF---------------------PSHLPPRMKNWRDKYEHHLLLKMAGDGVGE-AKSWLVDY 138 (294)
T ss_dssp --------------------------------------------CCHHHHHHHHHCSEEEEEEECTTHHHH-HHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHH---------------------HHHCCCCCCCCCCCCCEEEEEEECCCCHHH-HHHHHHHH
T ss_conf 55546556689999987888---------------------753732222224554425665526886899-99999999
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 886313456531001588889644331001221122--------235664444210013128999999999988634872
Q gi|254780761|r 306 LATGFNKKILTEWILPSLDEEKNAIWCLRNNIPLAQ--------KREGRSIKHDISVPIGQIPSFLQEVKKSVSSIFPKT 377 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~~--------~~~g~~~~~Dvavp~~~l~~~~~~v~~~l~~~~~~~ 377 (473)
.+... ...+..+.++...+|..|+.++.+. +..+..+.+|+++|.+..+.+ ....+.+.+ +..
T Consensus 139 ~~~~~------~~~~~~~~~e~~~lw~~R~~~~~a~~r~~~~~~~~~~~~~~~DisvP~~~~~~~-~~~~~~~~~--~~~ 209 (294)
T d1f0xa1 139 FKQAE------GDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWY-EHLPPEIDS--QLV 209 (294)
T ss_dssp HHHSS------CEEEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS-CCCCHHHHT--TEE
T ss_pred HHHCC------CCEEECCHHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCEEECCCCHHHHHHHH-HHHHHHHHC--CCC
T ss_conf 97455------330307999999998410003378887351011147871541232037678999-974998845--555
Q ss_pred EEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 28999984498699998427788806899999999999999999981891899735556568888873178999999999
Q gi|254780761|r 378 RIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHGIGQLHKKRLEGILEPTEIKIMKKI 457 (473)
Q Consensus 378 ~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHGiG~~k~~~~~~~~~~~~~~~l~~i 457 (473)
....|||+||||+|+++..+..... +++.+.+++++.++|||+|+|||||+.|+.+ ++|+++
T Consensus 210 ~~~~fGH~GDGNlH~~i~~~~~~~~--------~~~~~~i~~~v~~~GGsiSaEHGIG~~k~a~----------~~m~~i 271 (294)
T d1f0xa1 210 HKLYYGHFMCYVFHQDYIVKKGVDV--------HALKEQMLELLQQRGAQYPAEHNVGHLYKAP----------ETLQKF 271 (294)
T ss_dssp EEEEEEETTTTEEEEEEEEETTCCH--------HHHHHHHHHHHHHTTCBSCSSSCCTTTSCCC----------HHHHHH
T ss_pred EEECCCCCCCCCCEEEECCCCCCCH--------HHHHHHHHHHHHHCCCEEEEECCCCCHHCCH----------HHHHHH
T ss_conf 0002056565644454126887689--------9999999999998499898713676002269----------999999
Q ss_pred HHHHCCCCCCCCC
Q ss_conf 8871537778887
Q gi|254780761|r 458 KEIFDPAGIMNPG 470 (473)
Q Consensus 458 K~~~DP~gilNPG 470 (473)
|++|||+||||||
T Consensus 272 K~~lDP~nilNPG 284 (294)
T d1f0xa1 272 YRENDPTNSMNPG 284 (294)
T ss_dssp HHHHCTTCCBSTT
T ss_pred HHHCCCCCCCCCC
T ss_conf 9964989998899
No 6
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=100.00 E-value=1.9e-37 Score=251.64 Aligned_cols=261 Identities=15% Similarity=0.068 Sum_probs=167.8
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 32223332234654543101279940467544321000013526899999751023322222222451799999986144
Q gi|254780761|r 192 SRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQKTAGSMLTAFELISNFILKLVVKHIP 271 (473)
Q Consensus 192 ~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~ 271 (473)
.|||+..+++|||||||+||+++.+|.+.|-......+.++..+.+....+. ..+.....++...++...+..
T Consensus 1 ~gy~~~~l~~~seg~Lg~~ve~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~- 73 (287)
T d1e8ga1 1 GGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILLDAAVLGDKR------SYSSRTEPLSDEELDKIAKQL- 73 (287)
T ss_dssp SCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHHHHHHHCCGG------GTCCCSSCCCHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH------HHHHCCCCCCHHHHHHHHHHC-
T ss_conf 9812488847983179999999999876368763478863609999987678------886167888899999998752-
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC----------
Q ss_conf 4341157532110011135430689999999988886313456531001588889644331001221122----------
Q gi|254780761|r 272 NTFSPLSDTSPWYILLEISSTETLERAQNIANTILATGFNKKILTEWILPSLDEEKNAIWCLRNNIPLAQ---------- 341 (473)
Q Consensus 272 ~~~~~~~~~~~~~lli~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~~---------- 341 (473)
+...+.+.++++|.+...+ ...+.+.. .+............+..+...+|..|+......
T Consensus 74 -------~~~~~~~~~~l~G~~~~v~--~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 143 (287)
T d1e8ga1 74 -------NLGRWNFYGALYGPEPIRR--VLWETIKD-AFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDW 143 (287)
T ss_dssp -------TCCSEEEEEEEESCHHHHH--HHHHHHHH-HHTTSTTCEEECGGGSCTTCHHHHHHHHTTTCCCCGGGGGGGG
T ss_pred -------CCCHHHEEEECCCCHHHHH--HHHHHHHH-HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------7530131233156999999--99999999-9997699579835998889999999988676053212347763
Q ss_pred -CCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -2356644442100131-28999999999988634872289999844986999984277888068999999999999999
Q gi|254780761|r 342 -KREGRSIKHDISVPIG-QIPSFLQEVKKSVSSIFPKTRIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYS 419 (473)
Q Consensus 342 -~~~g~~~~~Dvavp~~-~l~~~~~~v~~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 419 (473)
...+..+..|+++|++ .+.++++.+++.++++ +..+..|+|+|+||+|+++....+...++. ...+..+.+.+.+
T Consensus 144 ~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~H~gdg~~h~~v~~~~d~~~~~~-~~~~~~~~~~l~~ 220 (287)
T d1e8ga1 144 LPNGAHLFFSPIAKVSGEDAMMQYAVTKKRCQEA--GLDFIGTFTVGMREMHHIVCIVFNKKDLIQ-KRKVQWLMRTLID 220 (287)
T ss_dssp STTEEEEEECBEECSSHHHHHHHHHHHHHHHHHH--TCCCCEEEEECSSCEEEEEEEEEETTCHHH-HHHHHHHHHHHHH
T ss_pred CCCCCEEEEECEECCCHHHHHHHHHHHHHHHHHC--CCCEEEEEEECCCCEEEEEEEECCCCCHHH-HHHHHHHHHHHHH
T ss_conf 5788705650310647678999999999999982--997689999868962589975068887778-8899999999999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99981891899735556568888873178999999999887153777888764
Q gi|254780761|r 420 VVLSYGGSIAAEHGIGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGKF 472 (473)
Q Consensus 420 ~~~~~gG~is~eHGiG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGkl 472 (473)
.++++||++|||||+|+.|++|+..++++..+++|++||++|||+|||||||.
T Consensus 221 ~~~~~GGsis~eHg~G~~k~~~~~~~~~~~~~~l~~~iK~a~DP~gIlNPGK~ 273 (287)
T d1e8ga1 221 DCAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKS 273 (287)
T ss_dssp HHHHTTCCBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred HHHHCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99983990798475588888888764599999999999998398868899999
No 7
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=100.00 E-value=2.9e-35 Score=237.87 Aligned_cols=180 Identities=20% Similarity=0.210 Sum_probs=153.0
Q ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCC---CCEEEEECCCCCCC-CCCCCCCC
Q ss_conf 401367668758995499899999999998729829997588777654010488---86699976300277-42112373
Q gi|254780761|r 34 EERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKN---RKDIILSIKRMNRI-RDIDLRSN 109 (473)
Q Consensus 34 d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~---~~~vvld~~~mn~i-l~id~~~~ 109 (473)
+|...+...|.+|++|+|+|||+++|++|++++++|.|||+|+|..|++.+... ...+++++++||+| +++|+++.
T Consensus 22 ~w~~~~~~~p~~v~~P~s~edV~~~V~~A~~~~~~v~~~G~Ghs~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~d~~~~ 101 (216)
T d2i0ka2 22 NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPVA 101 (216)
T ss_dssp CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSSC
T ss_pred HCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 01466246879899679899999999999867715999717544569825413576337999955554566422466664
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCH----------HHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 455114420022221001232223443343211131122212356400----------0112573334443323466653
Q gi|254780761|r 110 TIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTA----------VLSYGNIRHLCLGIEAVLPTGD 179 (473)
Q Consensus 110 ~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~----------s~~yG~~~d~v~~~~vv~~~G~ 179 (473)
+++||||++|.+|.+++.++|+.++..|.. ..+||||+++++++|.. +.+||.+.|+|+++++|++||+
T Consensus 102 ~v~v~aG~~~~~l~~~l~~~g~~l~~~~~~-~~~tigG~~~~~~~g~~~~~~gg~g~~~~~yG~~~d~v~~~~vV~~dG~ 180 (216)
T d2i0ka2 102 TVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGT 180 (216)
T ss_dssp EEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSS
T ss_pred EEEEEEEECHHHHHHHHHHCCCCCCCCCCH-HHEEECCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEEEEEEECCCC
T ss_conf 578986521235444454148632367871-2236415667971574113772454564225676781898999927998
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 0211220133223222333223465454310127994046
Q gi|254780761|r 180 IWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLP 219 (473)
Q Consensus 180 i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p 219 (473)
+++.... ...|......++++.+||||++|||++|
T Consensus 181 i~~~~~~-----~~~d~~~~~~~~~~g~giit~~tl~~~P 215 (216)
T d2i0ka2 181 TYALETY-----QRNDPRITPLLTNLGRCFLTSVTMQAGP 215 (216)
T ss_dssp SEEEEEE-----ETTSGGGHHHHSCTTSSCEEEEEEECEE
T ss_pred EEEECCC-----CCCCCCHHHHHHCCCCEEEEEEEEEECC
T ss_conf 9994476-----6798032058874874899999999758
No 8
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=100.00 E-value=5.4e-32 Score=217.38 Aligned_cols=237 Identities=10% Similarity=0.059 Sum_probs=157.2
Q ss_pred CCCCCCCCCHHH---HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC----CC-----------CCCCCEEC
Q ss_conf 210000135268---9999975102332222222245179999998614443411----57-----------53211001
Q gi|254780761|r 225 QVAFIAVNSLEQ---ALQLLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSP----LS-----------DTSPWYIL 286 (473)
Q Consensus 225 ~~~~~~f~~~~~---a~~~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~----~~-----------~~~~~~ll 286 (473)
+++++.|++.++ ++++++.+. .++..|+++|++|...+..+....+..... ++ +...|.+.
T Consensus 4 ~~~~v~f~~~~Dl~~aV~~lr~L~-~~gi~p~~~e~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~w~l~ 82 (279)
T d1wvfa1 4 KPFEVIFEDEADIVEIVDALRPLR-MSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLY 82 (279)
T ss_dssp EEEEEEECCGGGHHHHHHHHHHHH-HTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEE
T ss_pred EEEEEEECCHHHHHHHHHHHHHHH-HCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 799999469999999999999999-8599862257358899999874035666667788988999999987288741689
Q ss_pred CCCCCCCHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC---------C-CCCCCCCC--CCCC
Q ss_conf 11354306899-9999998888631345653100158888964433100122112---------2-23566444--4210
Q gi|254780761|r 287 LEISSTETLER-AQNIANTILATGFNKKILTEWILPSLDEEKNAIWCLRNNIPLA---------Q-KREGRSIK--HDIS 353 (473)
Q Consensus 287 i~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~---------~-~~~g~~~~--~Dva 353 (473)
++++|.+.... ..+....+... .. ..+........+...+|..|+..... . +..+..++ .++.
T Consensus 83 ~~l~G~~~~v~~~~~~i~~i~~~---~~-~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp 158 (279)
T d1wvfa1 83 AALYGTQEQVDVNWKIVTDVFKK---LG-KGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSE 158 (279)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHH---HT-CCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEE
T ss_pred EEEECCHHHHHHHHHHHHHHHHH---CC-CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf 98623999999999999999997---79-966895799888999999998400114566656752378998632643644
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 01312899999999998863487228999984498699998427788806899999999999999999981891899735
Q gi|254780761|r 354 VPIGQIPSFLQEVKKSVSSIFPKTRIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHG 433 (473)
Q Consensus 354 vp~~~l~~~~~~v~~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHG 433 (473)
+|+++++++++.+++.++++ +..+..|+|+||||+|+++....+...++.. .++..+.+.+.+.++++|| +|||
T Consensus 159 ~~~s~l~~~~~~~~~~~~~~--g~~~~~~~H~gdgnlh~~v~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~Gg---~eHG 232 (279)
T d1wvfa1 159 ARGSECKKQAAMAKRVLHKY--GLDYVAEFIVAPRDMHHVIDVLYDRTNPEET-KRADACFNELLDEFEKEGY---AVYR 232 (279)
T ss_dssp SCHHHHHHHHHHHHHHHHHT--TCCCCEEEEECSSEEEEEEEEEEETTCHHHH-HHHHHHHHHHHHHHHHTTC---CBSC
T ss_pred CCHHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHCC---CCCC
T ss_conf 87999999999999999980--9975899961786489975013578998999-9999999999999998099---7887
Q ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 556568888873178999999999887153777888764
Q gi|254780761|r 434 IGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGKF 472 (473)
Q Consensus 434 iG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGkl 472 (473)
||+.|++|+..++++..+++|++||++|||+|||||||.
T Consensus 233 iG~~~~~~l~~~~g~~~~~lm~~iK~alDP~~IlNPGK~ 271 (279)
T d1wvfa1 233 VNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRS 271 (279)
T ss_dssp CCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred CCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 748799999997298999999999998198867798978
No 9
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.96 E-value=1.5e-29 Score=202.04 Aligned_cols=193 Identities=20% Similarity=0.323 Sum_probs=155.3
Q ss_pred CHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEE
Q ss_conf 98999999973384418669899877313401367668758995499899999999998729829997588777654010
Q gi|254780761|r 5 SLDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIP 84 (473)
Q Consensus 5 ~~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p 84 (473)
+++++++|+.++++++|.+|+ .+..|++. ...+.++++++|+|++|+++++++|+++++|++|+|+|||+.+.
T Consensus 1 ~~~~~~~l~~~l~~~~i~~~~-~L~~~tt~---~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~--- 73 (194)
T d1hska1 1 NKDIYQALQQLIPNEKIKVDE-PLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--- 73 (194)
T ss_dssp CHHHHHHHHHHSCGGGEEEEE-EGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEEC---
T ss_pred CHHHHHHHHHHCCCCCEEECC-CCHHCCEE---EECEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---
T ss_conf 978999998666836378278-40343271---12829889995199999999998756436536786055422357---
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCC-
Q ss_conf 4888669997630027742112373455114420022221001232223443343211131122212356400011257-
Q gi|254780761|r 85 RKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGN- 163 (473)
Q Consensus 85 ~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~- 163 (473)
..+-.++|+++++|+++ +.++.+++||||+.+.++.+++.++|+. +.++.+...+||||+|++|+++ ||.
T Consensus 74 d~~~~g~vi~l~~~~~~---~~~~~~v~~~aG~~~~~l~~~~~~~gl~-g~e~~~gipgtvGGai~mNaG~-----yG~e 144 (194)
T d1hska1 74 EGGIRGIVISLLSLDHI---EVSDDAIIAGSGAAIIDVSRVARDYALT-GLEFACGIPGSIGGAVYMNAGA-----YGGE 144 (194)
T ss_dssp TTCEEEEEEECTTCCCE---EEETTEEEEETTSBHHHHHHHHHHTTEE-SCGGGTTCCSBHHHHHHHTCEE-----TTEE
T ss_pred CCCCEEEEEEEECCCCC---CCCCCEEEEEECCCHHHHHHHHHHHCCC-CCCCCCCCCEEEHHHHHCCCCC-----CCCE
T ss_conf 78722399982022222---2469769998356317888999861034-3324277663345455525741-----6841
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 33344433234666530211220133223222333223465454310127994046
Q gi|254780761|r 164 IRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLP 219 (473)
Q Consensus 164 ~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p 219 (473)
+.|+|.++++++++|++.+... +...+.-++-.+..+ -.||++|||||.|
T Consensus 145 i~d~v~~v~~v~~~G~i~~l~~----~e~~f~YR~s~~~~~--~~iIl~a~f~L~P 194 (194)
T d1hska1 145 VKDCIDYALCVNEQGSLIKLTT----KELELDYRNSIIQKE--HLVVLEAAFTLAP 194 (194)
T ss_dssp HHHHEEEEEEECTTSCEEEEET----TTTTCBTTBCHHHHT--TCEEEEEEEECEE
T ss_pred EEEEEEEEEEECCCCCEEEEEH----HHCCCCCCCCCCCCC--CEEEEEEEEEEEC
T ss_conf 7889999999948998999878----992630777879999--9999999999979
No 10
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.86 E-value=1.5e-21 Score=151.78 Aligned_cols=173 Identities=16% Similarity=0.134 Sum_probs=135.7
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 76687589954998999999999987298299975887776540104888669997630027742112373455114420
Q gi|254780761|r 39 YHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGIN 118 (473)
Q Consensus 39 ~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~ 118 (473)
..+.+..++.|.|++|+++++++|+++++|+.+.|+|||+. ++....++|++++.+++++. .+.++.+++|+||+.
T Consensus 11 igG~A~~~~~p~s~edl~~~l~~~~~~~~p~~vlG~GSNlL---~~d~~~~~vi~~~~~~~~~~-~~~~~~~v~vgAG~~ 86 (198)
T d1uxya1 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVL---FLEDYRGTVIINRIKGIEIH-DEPDAWYLHVGAGEN 86 (198)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEE---ECSCEEEEEEEECCCCEEEE-ECSSEEEEEEETTSB
T ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCCCCCCCCCCCCCCEEE-ECCCCEEEEEECCCC
T ss_conf 69186399997999999999998887699889995156632---22323475310023310023-035404999803654
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCC-CCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 02222100123222344334321113112221235640001125733344433234-66653021122013322322233
Q gi|254780761|r 119 LFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLCLGIEAV-LPTGDIWNGMHKLIKDNSRYDIR 197 (473)
Q Consensus 119 ~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v~~~~vv-~~~G~i~~~~~~~~~~~~G~dl~ 197 (473)
|.+|.+++.++|+. +.++.+.--+||||.|++|++. ..+.+.|.+.+++++ +++|++.+.. ++.-.+.-+
T Consensus 87 ~~~l~~~~~~~gl~-G~E~l~gIPGtvGGai~mNaG~----~g~ei~~~l~~V~~v~~~~G~~~~~~----~~e~~f~YR 157 (198)
T d1uxya1 87 WHRLVKYTLQEGMP-GLENLALIPGCVGSSPIQNIGA----YGVELQRVCAYVDSVELATGKQVRLT----AKECRFGYR 157 (198)
T ss_dssp HHHHHHHHHHTTCC-SCGGGTTCCSBGGGTTTTTCEE----TTEEGGGTEEEEEEEETTTTEEEEEE----TGGGTCBTT
T ss_pred HHHHHHHHHHCCCC-CCHHHCCCCCCCCHHHHHCCCC----CCCCHHHCEEEEEEEECCCCCEEEEE----CCCCCEECC
T ss_conf 58999999983885-3032142644312455534400----14651220244677743799689971----555623545
Q ss_pred C-CCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 3-22346545431012799404675443
Q gi|254780761|r 198 D-LLIGSEGTLGIITGAVLRLLPYRTGK 224 (473)
Q Consensus 198 ~-l~~GseGtlGiITevtlrl~p~p~~~ 224 (473)
+ .|.++++..+|||+|+|||.|.|+..
T Consensus 158 ~S~f~~~~~~~~iIl~a~f~L~~~~~~~ 185 (198)
T d1uxya1 158 DSIFKHEYQDRFAIVAVGLRLPKEWQPV 185 (198)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCCCC
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCC
T ss_conf 5203566789889999999978988766
No 11
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.12 E-value=1.4e-06 Score=57.82 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=68.4
Q ss_pred ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC
Q ss_conf 54998999999999987298299975887776540104888669997630027742112373455114420022221001
Q gi|254780761|r 48 LPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAE 127 (473)
Q Consensus 48 ~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~ 127 (473)
.|.|.+|..++++- +. +.. +.+|||.+.-+.-........++|+++....-.|...+..++++|++++.++.+.+.
T Consensus 4 ~P~tl~e~~~l~~~-~p-~a~--~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~~~~ 79 (167)
T d1jroa4 4 LPETSDALADWYLA-HP-EAT--LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAE 79 (167)
T ss_dssp CCSSHHHHHHHHHH-CT-TCE--EESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHHHHT
T ss_pred CCCCHHHHHHHHHH-CC-CCE--EEECCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 86559999999977-89-987--997577589886402247874670100144005775034212464002899987666
Q ss_pred CCCCCCC------CCCCCCCCCCCHHHHHCCCC
Q ss_conf 2322234------43343211131122212356
Q gi|254780761|r 128 KNHRLFP------LSLPSEKYCHIGGNLATNAG 154 (473)
Q Consensus 128 ~~g~~~p------~~p~s~~~aTvGG~ia~~~~ 154 (473)
.+.-.+. -+++=...+||||++++.+.
T Consensus 80 ~~~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~p 112 (167)
T d1jroa4 80 GPHPALAGLLRRFASEQVRQVATIGGNIANGSP 112 (167)
T ss_dssp TTCHHHHHHHHTSSCHHHHTTCBHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHCCHHHHEEEEECCCEEECCC
T ss_conf 367999999986348756225575252233352
No 12
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=98.04 E-value=3.5e-06 Score=55.32 Aligned_cols=151 Identities=15% Similarity=0.179 Sum_probs=90.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf 87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r 42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN 121 (473)
Q Consensus 42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~ 121 (473)
.|.-..+|.|.+|..++++--+.. ..+.+|||.+....-........++|+++....-.|+.++..++++|++++.+
T Consensus 4 ~~f~~~~P~sl~Ea~~ll~~~~~~---a~~laGGTdl~~~~~~~~~~~~~lidl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (177)
T d1ffvc2 4 PRFEYHAPKSVGEAVALLGQLGSD---AKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND 80 (177)
T ss_dssp CCCEEECCSSHHHHHHHHHHHGGG---EEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred CCCEEECCCCHHHHHHHHHHCCCC---CEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEHHH
T ss_conf 984078989999999999744999---88997076057656425368301007665220356850596699753678999
Q ss_pred HHHHCCCCCCCCC---------CCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCC-----CCCCCCCC--CCCCCEEEEE
Q ss_conf 2210012322234---------433432111311222123564000112573334-----44332346--6653021122
Q gi|254780761|r 122 VQKIAEKNHRLFP---------LSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHL-----CLGIEAVL--PTGDIWNGMH 185 (473)
Q Consensus 122 l~~~l~~~g~~~p---------~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~-----v~~~~vv~--~~G~i~~~~~ 185 (473)
+.+.-.... .+| -+|+=...+||||+|++.+.. .|+ .++.+|++ ++|+ +
T Consensus 81 l~~~~~~~~-~~~~l~~a~~~~as~qIRn~aTiGGni~~~~p~---------~D~~~~LlAl~A~v~l~~~~g~-----r 145 (177)
T d1ffvc2 81 LISSPIVQA-RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG---------NDHPALSIAVEAHFVLEGPNGR-----R 145 (177)
T ss_dssp HHHCHHHHH-HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT---------CSHHHHHHHTTCEEEEEETTEE-----E
T ss_pred HHHCCCCCH-HHHHHHHHHHCCCCHHHEEEEEECCCEEECCCC---------CCHHHHHHHHCCEEEEECCCCE-----E
T ss_conf 973921015-789999998535892156899853636651344---------4136799862343899769956-----9
Q ss_pred ECCCCCCCCCCCCCCCCCCC----CCCCEEEEEEEE
Q ss_conf 01332232223332234654----543101279940
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEG----TLGIITGAVLRL 217 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseG----tlGiITevtlrl 217 (473)
.+ .+.++|.|..- .--+||++.+-.
T Consensus 146 ~v-------pl~df~~g~~~t~l~~~Eii~~I~iP~ 174 (177)
T d1ffvc2 146 TV-------PADGFFLGTYMTLLEENEVMVEIRVPA 174 (177)
T ss_dssp EE-------ESTTTEEETTEESCCTTCEEEEEEEEC
T ss_pred EE-------EHHHHCCCCCCCCCCCCCEEEEEEECC
T ss_conf 98-------999942574525469986699998027
No 13
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=98.04 E-value=1.9e-06 Score=56.94 Aligned_cols=105 Identities=13% Similarity=0.204 Sum_probs=69.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCC-CCCEEEECCCCCHHH
Q ss_conf 7589954998999999999987298299975887776540104888669997630027742112-373455114420022
Q gi|254780761|r 43 SPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDL-RSNTIAVDAGINLFN 121 (473)
Q Consensus 43 p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~-~~~~v~veaGv~~~~ 121 (473)
+.-..+|.|.+|..+++. +++ -.+.+|||.+....--.......+||++++.....|.. ++..++++|++++.+
T Consensus 6 ~F~y~~P~sl~EA~~ll~---~~~--a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~~ 80 (216)
T d1rm6b2 6 DFRTHRPATLADAVNALA---AEA--TLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEA 80 (216)
T ss_dssp CCEEECCSSHHHHHHHTT---STT--EEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHH
T ss_pred CCEEECCCCHHHHHHHHC---CCC--CEEEECCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEEEEEHHH
T ss_conf 945768999999999862---899--969977754899984365686510356562655202234687079833235688
Q ss_pred HHH--HCCCCC--C-----CCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 221--001232--2-----2344334321113112221235
Q gi|254780761|r 122 VQK--IAEKNH--R-----LFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 122 l~~--~l~~~g--~-----~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
+.+ .+.++- + .+ -+|+=...+||||+|++++
T Consensus 81 l~~~~~l~~~~p~L~~a~~~~-as~qIRN~aTiGGNl~~~s 120 (216)
T d1rm6b2 81 IAEHDAIRTTWPALAQAAESV-AGPTHRAAATLGGNLCQDT 120 (216)
T ss_dssp HHHCHHHHHHSHHHHHHHHHS-SCHHHHHHCBHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCHHHHCCEECCCCCCCCC
T ss_conf 665332022569999999987-7999968722241146677
No 14
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.87 E-value=9e-06 Score=52.72 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=70.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCH
Q ss_conf 66875899549989999999999872982999758877765401048886699976300277421123734551144200
Q gi|254780761|r 40 HGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINL 119 (473)
Q Consensus 40 ~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~ 119 (473)
...-.--++|.|.+|..++++- +.= ..+.+|||.+.-..--......++||++++.....|..++..++++|++++
T Consensus 39 ~~~~~~w~~P~sl~ea~~ll~~---~~~-a~~vaGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 114 (223)
T d1v97a6 39 EGERVTWIQASTLKELLDLKAQ---HPE-AKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 114 (223)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH---CTT-CEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGTCEEECSSEEEEETTCBH
T ss_pred CCCEEEEECCCCHHHHHHHHHH---CCC-CEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCCCH
T ss_conf 7983799788989999999976---899-879970635999974355787738970345333716753751787155559
Q ss_pred HHHHHHCCCCC--------CCCC---------CCCCCCCCCCCHHHHHCCC
Q ss_conf 22221001232--------2234---------4334321113112221235
Q gi|254780761|r 120 FNVQKIAEKNH--------RLFP---------LSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 120 ~~l~~~l~~~g--------~~~p---------~~p~s~~~aTvGG~ia~~~ 153 (473)
.++++.+...- ..+| -+++=...+||||+|++.+
T Consensus 115 ~~l~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiGGNl~~a~ 165 (223)
T d1v97a6 115 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 165 (223)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCHHHHCC
T ss_conf 999998987654134667665468999999747986845668431222044
No 15
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]}
Probab=97.64 E-value=3.9e-05 Score=48.75 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=69.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf 87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r 42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN 121 (473)
Q Consensus 42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~ 121 (473)
.+.-..+|.|.+|+.++++- +.= ..+.+|||.+.-..-........++|++++.....|..++..++++|++++.+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~---~~~-a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~ 79 (176)
T d1t3qc2 4 PAFSYRAPASLQEVIQVLAD---DPD-ARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (176)
T ss_dssp CCCEEECCSSHHHHHHHHHH---CTT-CEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CCCEEECCCCHHHHHHHHHH---CCC-CEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHH
T ss_conf 88426488999999999976---899-87995478346656442038663337555302531660474122032003688
Q ss_pred HHHHC--CCCC-------CCCCCCCCCCCCCCCHHHHHCCCC
Q ss_conf 22100--1232-------223443343211131122212356
Q gi|254780761|r 122 VQKIA--EKNH-------RLFPLSLPSEKYCHIGGNLATNAG 154 (473)
Q Consensus 122 l~~~l--~~~g-------~~~p~~p~s~~~aTvGG~ia~~~~ 154 (473)
+...- .++. ..+ -+|+=...+||||+|++.+.
T Consensus 80 l~~~~~~~~~~p~l~~a~~~i-as~qIRn~aTiGGNi~~a~p 120 (176)
T d1t3qc2 80 NKTDPTVAKCVPILPKVLAHV-AHQAVRNRGTLGGSLAHADA 120 (176)
T ss_dssp HHHCHHHHHHCTHHHHHHTTS-SCHHHHTTCBHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEEECCCCEECCC
T ss_conf 888765310156999999724-78125878751474100230
No 16
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=97.59 E-value=0.00039 Score=42.46 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=68.7
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HHHHHCCCCEEEEEEEE------------CCC-EEEEE-EECCCCCCCHHHHHHHHHHH
Q ss_conf 44210013128999999999-98863487228999984------------498-69999-84277888068999999999
Q gi|254780761|r 349 KHDISVPIGQIPSFLQEVKK-SVSSIFPKTRIGLFGHI------------GDG-NIHFN-VFPPTDENQDEFLSLHWNTI 413 (473)
Q Consensus 349 ~~Dvavp~~~l~~~~~~v~~-~l~~~~~~~~~~~~gH~------------g~g-~lh~~-~~~~~~~~~~~~~~~~~~~i 413 (473)
+.++-||-+++.+|.+.+-+ ++........+.+|--. =++ .+|.. ++.... ..+. .....+-
T Consensus 152 WlNlfvP~s~I~~F~~~Vf~~il~~~~~~GpiLvYP~~~~kwd~~~s~v~PdeevfylvalL~sa~-~~~~--~~~l~~q 228 (289)
T d1w1oa1 152 WLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSV-APND--LARLQEQ 228 (289)
T ss_dssp CEEEEEEGGGHHHHHHHHTTTTTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC----CH--HHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCH--HHHHHHH
T ss_conf 567860245899999999984356668997089997251125788643079877899999954889-9625--9999999
Q ss_pred HHHHHHHHHHHCCCE----EEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 999999999818918----9973555656888887317899999999988715377788876
Q gi|254780761|r 414 NNIVYSVVLSYGGSI----AAEHGIGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGK 471 (473)
Q Consensus 414 ~~~~~~~~~~~gG~i----s~eHGiG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGk 471 (473)
++.+.+.+.+.|+.+ +|+ ..+..| ...+|+...+.+.+.|+.|||++||+||-
T Consensus 229 N~~il~~c~~aG~~~k~yl~~~----~t~~dW-~~HFG~~kW~~F~~~K~~yDP~~ILsPGQ 285 (289)
T d1w1oa1 229 NRRILRFCDLAGIQYKTYLARH----TDRSDW-VRHFGAAKWNRFVEMKNKYDPKRLLSPGQ 285 (289)
T ss_dssp HHHHHHHHHHTTCCCEESSCCC----SSHHHH-HHHHCHHHHHHHHHHHHHHCTTCCBCGGG
T ss_pred HHHHHHHHHHCCCCCEEECCCC----CCHHHH-HHHCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999999998399626867888----998999-98719116799999986079510158987
No 17
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=97.56 E-value=2.6e-05 Score=49.84 Aligned_cols=153 Identities=18% Similarity=0.187 Sum_probs=91.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf 87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r 42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN 121 (473)
Q Consensus 42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~ 121 (473)
.+.-..+|.|.+|..++++-.+.. ..+-+|||.+.-.--........++|+++++....|..++..+++++.+++.+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~~~~~---a~~laGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~~~~iGa~~t~~~ 80 (177)
T d1n62c2 4 GSFDYHRPKSIADAVALLTKLGED---ARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (177)
T ss_dssp CCCEEECCSSHHHHHHHHHHHGGG---EEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred CCCCEECCCCHHHHHHHHHHCCCC---CEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHH
T ss_conf 986463889999999999753999---76998247224325305577653346202523408963585699703454887
Q ss_pred HHHH--CCCCCC-------CCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCC-----CCCCCC--CCCCCCEEEEE
Q ss_conf 2210--012322-------2344334321113112221235640001125733344-----433234--66653021122
Q gi|254780761|r 122 VQKI--AEKNHR-------LFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLC-----LGIEAV--LPTGDIWNGMH 185 (473)
Q Consensus 122 l~~~--l~~~g~-------~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v-----~~~~vv--~~~G~i~~~~~ 185 (473)
+.+. +.++.- .+ -+|+=...+||||+|++.+.. .|++ ++.+++ .++|+ +
T Consensus 81 ~~~~~~~~~~~p~l~~a~~~~-as~qIRn~aTiGGNi~~a~p~---------~D~~~~Llal~A~v~l~~~~G~--R--- 145 (177)
T d1n62c2 81 LIGSDFLAAKLPIIRETSLLI-ADPQIRYMGTIGGNAANGDPG---------NDMPALMQCLGAAYELTGPEGA--R--- 145 (177)
T ss_dssp HHHCHHHHHHCHHHHHHHTTS-SCHHHHHHCBHHHHHHSCCTT---------CSHHHHHHHHTCEEEEEETTEE--E---
T ss_pred HHCCHHHHHHCCHHHHHHHHC-CCHHHEEEEEEECCEECCCCC---------CHHHHHHHHHCCEEEEECCCCE--E---
T ss_conf 521076765364799996413-894276899961532014533---------3268999984031488538835--9---
Q ss_pred ECCCCCCCCCCCCCCCCCCCC----CCCEEEEEEEECC
Q ss_conf 013322322233322346545----4310127994046
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGT----LGIITGAVLRLLP 219 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGt----lGiITevtlrl~p 219 (473)
.+ .+.++|.|.--| --|||++.+.+-|
T Consensus 146 ~v-------pl~dF~~g~~~t~l~~~Eii~~I~iP~p~ 176 (177)
T d1n62c2 146 IV-------AARDYYQGAYFTAIEPGELLTAIRIPVPP 176 (177)
T ss_dssp EE-------EHHHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EE-------EHHHHCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 98-------99995056031345989769999965998
No 18
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.65 E-value=0.57 Score=22.57 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=43.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| +.+|-|+.+.+...+....+.+.++.|.+.++|..++..+.
T Consensus 24 ~nLp~~~te~~L~~~F----~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ln 80 (101)
T d1x5oa1 24 SNLPLSMDEQELENML----KPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFN 80 (101)
T ss_dssp ESCCTTCCHHHHHHTT----TTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHB
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 6999989899999888----61366421011001123566310477689999999999848
No 19
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=80.52 E-value=0.45 Score=23.25 Aligned_cols=47 Identities=9% Similarity=0.002 Sum_probs=34.6
Q ss_pred CCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 11237345511442002222100123222344334321113112221235
Q gi|254780761|r 104 IDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 104 id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
|-.++++-.|.+-+.+.++++++. .-+|.++.+..+.||||||-...
T Consensus 2 v~~~dg~~~v~G~~~l~dl~~~l~---~~~~~~~e~~~~~Tl~G~i~~~l 48 (84)
T d2plsa1 2 VQREDGSWLLDGLIAVPELKDTLG---LRAVPEEEKGVYHTLSGMIMWLL 48 (84)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHT---CSCCTTTTSCSCCBHHHHHHHHH
T ss_pred EEECCCEEEEECCCCHHHHHHHHC---CCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 694198699982689999999878---89986211454348999999976
No 20
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.78 E-value=0.55 Score=22.65 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=42.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.|.+.+--||..+| ..+|-|+++.+..-+-.+.+...++.|.+.++|..+++.+.
T Consensus 6 ~nLp~~~~~~~l~~~F----~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~ 62 (78)
T d1no8a_ 6 SNLDFGVSDADIQELF----AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 62 (78)
T ss_dssp ESCCTTCCHHHHHHHH----HHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 8899879899999999----98599728999986012454368999989999999999838
No 21
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]}
Probab=77.62 E-value=0.97 Score=21.12 Aligned_cols=23 Identities=17% Similarity=0.367 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99899999999998729829997
Q gi|254780761|r 50 SCTHEVSQILKLATETNTSITPQ 72 (473)
Q Consensus 50 ~~~~ev~~iv~~a~~~~i~v~pr 72 (473)
=|.+|+.+|+++|.+++|-|+|-
T Consensus 72 yT~~di~~iv~ya~~rgI~viPE 94 (356)
T d1jaka1 72 YTKAEYKEIVRYAASRHLEVVPE 94 (356)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 28999999999999729868644
No 22
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]}
Probab=75.65 E-value=1.2 Score=20.58 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 9989999999999872982999
Q gi|254780761|r 50 SCTHEVSQILKLATETNTSITP 71 (473)
Q Consensus 50 ~~~~ev~~iv~~a~~~~i~v~p 71 (473)
=|.+|+.+|+++|.+++|-|+|
T Consensus 87 YT~~ei~eiv~yA~~rgI~vIP 108 (443)
T d1qbaa3 87 FSRQDYIDIIKYAQARQIEVIP 108 (443)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
T ss_conf 1899999999999984998964
No 23
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]}
Probab=75.39 E-value=1.2 Score=20.51 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99899999999998729829997
Q gi|254780761|r 50 SCTHEVSQILKLATETNTSITPQ 72 (473)
Q Consensus 50 ~~~~ev~~iv~~a~~~~i~v~pr 72 (473)
=|.+|+.+|+++|.+++|-|+|-
T Consensus 77 yt~~e~~~lv~yA~~rgI~viPe 99 (344)
T d1yhta1 77 LSYRQLDDIKAYAKAKGIELIPE 99 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 37999999999999769789866
No 24
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.00 E-value=1.3 Score=20.41 Aligned_cols=23 Identities=13% Similarity=0.303 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99899999999998729829997
Q gi|254780761|r 50 SCTHEVSQILKLATETNTSITPQ 72 (473)
Q Consensus 50 ~~~~ev~~iv~~a~~~~i~v~pr 72 (473)
=|.+|+.+|+++|.+++|-|+|-
T Consensus 67 yT~~d~~~lv~yA~~rgI~iiPE 89 (353)
T d1nowa1 67 YTPNDVRMVIEYARLRGIRVLPE 89 (353)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 69999999999999779999744
No 25
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.78 E-value=1.2 Score=20.53 Aligned_cols=57 Identities=16% Similarity=0.063 Sum_probs=42.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+.-||..+| ..+|-|+++.+..-+. -+.+...++.|.+.++|..++..+.
T Consensus 7 ~nlp~~~te~~l~~~F----~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~ 64 (85)
T d2u2fa_ 7 GGLPNYLNDDQVKELL----TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLN 64 (85)
T ss_dssp ETCCSSCCSHHHHHHH----TSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSS
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 8999989999999999----745765247760245665654059999889999999999719
No 26
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.23 E-value=0.72 Score=21.94 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=39.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+++|...+.-+|..+| ..+|-|+++.| ++.+.+.++.|.+.++|..|+..+.
T Consensus 16 ~nLp~~~t~~~L~~~F----~~fG~I~~v~l-----~~~kg~afV~f~~~~~A~~A~~~ln 67 (111)
T d1whxa_ 16 KNLPAGTLAAEIQETF----SRFGSLGRVLL-----PEGGITAIVEFLEPLEARKAFRHLA 67 (111)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSCEEEEEC-----CSSSSCEEEEESCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCCCEEEE-----ECCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7989988899997664----02688618996-----0468638999847789999999976
No 27
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.12 E-value=1.6 Score=19.71 Aligned_cols=23 Identities=9% Similarity=0.248 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99899999999998729829997
Q gi|254780761|r 50 SCTHEVSQILKLATETNTSITPQ 72 (473)
Q Consensus 50 ~~~~ev~~iv~~a~~~~i~v~pr 72 (473)
=|.+|+.+|+++|.+++|-|+|-
T Consensus 68 yT~~d~~elv~yA~~rgI~vIPE 90 (362)
T d2gjxa1 68 YTAQDVKEVIEYARLRGIRVLAE 90 (362)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 38999999999999759879853
No 28
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.97 E-value=1.3 Score=20.24 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=40.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|-|.++.+..-+. .+.+.++++.|.+.++|..|+..+.
T Consensus 15 ~nL~~~~te~~l~~~F----~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~ 72 (83)
T d2cqca1 15 FGLSLYTTERDLREVF----SKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN 72 (83)
T ss_dssp ESCCSSCCHHHHHHHH----HTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 3999989899999999----985977300111366665555302899889999999999809
No 29
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.67 E-value=1.7 Score=19.52 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=41.9
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHHH
Q ss_conf 66530211220133223222333223465454310127994046754432100001352-6899999751
Q gi|254780761|r 176 PTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSL-EQALQLLQLS 244 (473)
Q Consensus 176 ~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~-~~a~~~~~~~ 244 (473)
|-|-++.--+.++...+--||..+| +.+|-|+.+.+ ++.+...|+.|.+- ++|.+++..+
T Consensus 8 ~~g~~~~fvgnL~~~~tee~Lk~~F----~~fG~V~~v~i-----~~~kg~gfV~F~~~~~~A~~a~~~~ 68 (113)
T d1owxa_ 8 KIGCLLKFSGDLDDQTCREDLHILF----SNHGEIKWIDF-----VRGAKEGIILFKEKAKEALGKAKDA 68 (113)
T ss_dssp CCCCEEEEEESCCSSCCHHHHHHHT----CSSCCEEEEEC-----CTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHH----HHCCCHHEEEE-----ECCCCEEEEEECCCHHHHHHHHHHH
T ss_conf 8897699987999878799999999----83577414887-----4588668999668278999999983
No 30
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.25 E-value=1.5 Score=19.85 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=41.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+-.||..+| +.+|-|.++.+-.-+. ...+...++.|.+.++|..+++.+.
T Consensus 12 ~nLp~~~te~~L~~~F----~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~ln 69 (85)
T d1fxla2 12 SGLPKTMTQKELEQLF----SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLN 69 (85)
T ss_dssp ESCCTTCCHHHHHHHH----GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 5989989899999999----984976310301245443578716999858999999999838
No 31
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=70.62 E-value=1.7 Score=19.67 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=41.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+-.+|..+| ..+|-|.++.+-.-+. .+.+...++.|.+.++|..+++.+.
T Consensus 12 ~nlp~~~te~~l~~~F----~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~ 69 (85)
T d1b7fa2 12 TNLPRTITDDQLDTIF----GKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 69 (85)
T ss_dssp ESCCTTCCHHHHHHHH----TSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 4989979999999999----965987464310123555676069999899999999999978
No 32
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.85 E-value=2.6 Score=18.48 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=39.9
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 01332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.|.+.+--+|..+| +.+|-|..+.+...+. ...+..+++.|.+.++|..|+..+.
T Consensus 5 nLp~~~te~~l~~~F----~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ln 61 (72)
T d1x4ea1 5 GLQPGTTDQDLVKLC----QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALK 61 (72)
T ss_dssp SCCTTCCHHHHHTTS----TTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 799858899999988----632333221110002332234115999889999999999838
No 33
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.50 E-value=1.2 Score=20.48 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=39.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC--CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467--544321000013526899999751
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY--RTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~--p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
++.|.+.+--||..+| +.+|=|+.+.+-..+. ...+.++++.|.+.++|..++..+
T Consensus 14 ~nLp~~~~e~~l~~~F----~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l 71 (94)
T d2cpha1 14 RNIPFQANQREIRELF----STFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNAL 71 (94)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHC
T ss_conf 6999989999999999----985996488988536667983668999989999999999972
No 34
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.25 E-value=2.6 Score=18.47 Aligned_cols=57 Identities=14% Similarity=0.140 Sum_probs=41.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675-443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYR-TGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p-~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.++.+.+--||..+| ..+|-|.++.+...+.- ..+.++++.|.+.++|..+++.+.
T Consensus 24 ~nLp~~~te~~l~~~F----~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~ln 81 (102)
T d2cpza1 24 YHLPQEFGDQDLLQMF----MPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMN 81 (102)
T ss_dssp ESCCSSCCHHHHHHHH----GGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 5999999999999999----763345432100001369876533887489999999999858
No 35
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.23 E-value=1.9 Score=19.24 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=41.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.|.+.+--+|..+| ..+|-|+++.+-..+. ...+.++++.|.+.++|..+++.+.
T Consensus 13 ~nlp~~~te~~l~~~F----~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~ 70 (93)
T d1h2vz_ 13 GNLSFYTTEEQIYELF----SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYIN 70 (93)
T ss_dssp ESCCTTCCHHHHHHHH----GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 5999979899999999----987886200102465532224157999889999999999808
No 36
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.16 E-value=2.5 Score=18.54 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=40.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+.-||..+| ..+|-|+++.+-..+. -..+.++++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~t~~~l~~~f----~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~ 71 (90)
T d2cq0a1 14 TNLSEDTRETDLQELF----RPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVS 71 (90)
T ss_dssp ESCCTTCCHHHHHTTS----TTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 7999879899999999----875623321111135544666320589899999999999828
No 37
>d3deda1 d.145.1.4 (A:341-427) Probable hemolysin CV0231 {Chromobacterium violaceum [TaxId: 536]}
Probab=68.73 E-value=1.5 Score=20.00 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=31.5
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCC-CCCCCCCCCCHHHHHCCC
Q ss_conf 37345511442002222100123222344-334321113112221235
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPL-SLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~-~p~s~~~aTvGG~ia~~~ 153 (473)
++++-.|.+-+.+.+|++.+ |+.+|. +..+..+.|||||+-...
T Consensus 7 ~dg~~~v~G~~~l~dl~~~~---~~~l~~~~~~~~~~~TlgG~il~~l 51 (87)
T d3deda1 7 EDGSWLVDGMVSLDRFREFF---ELEAPLPGEAGGNIHTLAGVMLYQL 51 (87)
T ss_dssp TTSCEEEETTCBHHHHHHHT---TCCSCCTTGGGTCCCBHHHHHHHHH
T ss_pred CCCEEEEEEECCHHHHHHHH---CCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 69969998007999999986---9988877443555127999999986
No 38
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.68 E-value=3 Score=18.09 Aligned_cols=57 Identities=18% Similarity=0.213 Sum_probs=39.0
Q ss_pred EECCCCCCCCCC---CCCCCCCCCCCCCEEEEEEEECCCCC----CCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223---33223465454310127994046754----43210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDI---RDLLIGSEGTLGIITGAVLRLLPYRT----GKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl---~~l~~GseGtlGiITevtlrl~p~p~----~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+-.|| ..+| +.+|-|+.+.+.-.+... .....++.|.+.++|..|+..+.
T Consensus 14 ~nLp~~~t~~~l~~~~e~F----~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~ln 77 (89)
T d2cpia1 14 VGLSQRLADPEVLKRPEYF----GKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVN 77 (89)
T ss_dssp EEECTTTCCHHHHHSTTTT----TTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHHHHH----CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHC
T ss_conf 7989763878999889876----355882587772026768777765379985154122999999858
No 39
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.29 E-value=1.6 Score=19.69 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=39.6
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 01332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+.+.+.-||.++| ..+|-|.++.+-.-+. ...+...++.|.+.++|..++..+.
T Consensus 7 nL~~~~te~~l~~~F----~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~ 63 (80)
T d1cvja1 7 DLHPDVTEAMLYEKF----SPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN 63 (80)
T ss_dssp SCCTTCCHHHHHHHH----GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTST
T ss_pred CCCCCCCHHHHHHHH----HHHCCEEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 798848799999999----976988599998404544778836999889999999999819
No 40
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.91 E-value=1.9 Score=19.23 Aligned_cols=55 Identities=24% Similarity=0.240 Sum_probs=40.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+.-||.++| ..+|-|..+.+.- ....+.+.++.|.+.++|..++..+.
T Consensus 20 ~nLp~~~t~~~l~~~F----~~~G~v~~~~~~~--~~~~~g~afV~f~~~e~a~~Ai~~l~ 74 (95)
T d1x4aa1 20 GNLPPDIRTKDIEDVF----YKYGAIRDIDLKN--RRGGPPFAFVEFEDPRDAEDAVYGRD 74 (95)
T ss_dssp ESCCTTCCHHHHHHHH----GGGSCEEEEEECC--SSSSSCCEEEEESCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCEEEEEECC--CCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7989889899999988----4278669988415--65546539999889999999999819
No 41
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.40 E-value=1.8 Score=19.40 Aligned_cols=54 Identities=20% Similarity=0.283 Sum_probs=39.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+--||..+| ..+|-|..+.|+--+--..+.++++.|.+.++|..++.
T Consensus 12 ~nlp~~~te~~l~~~F----~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~ 65 (85)
T d1zh5a2 12 KGFPTDATLDDIKEWL----EDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE 65 (85)
T ss_dssp ECCCTTCCHHHHHHHH----TTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 7979879799999989----87552423003210258863578999848999999999
No 42
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=66.89 E-value=3.2 Score=17.86 Aligned_cols=63 Identities=10% Similarity=0.115 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 78989999999733844186698998773134013676687589954998999999999987298299975
Q gi|254780761|r 3 QLSLDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQG 73 (473)
Q Consensus 3 ~~~~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prG 73 (473)
-|+.+-++.|....|+.-|.. +. ...+.....|..||.|..-.+....=.++..+++|++.|.
T Consensus 15 ~mt~d~Le~mv~lCGAsVvk~-~~-------~l~~~~~~~~viVvqpda~t~~~~~~~i~~~~~~~vVtre 77 (97)
T d1l0ba2 15 NMPKDELERMLQLCGASVVKE-LP-------LLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWD 77 (97)
T ss_dssp SSCHHHHHHHHHHTTCEEECS-SS-------CGGGCCSSCCEEEEC-------------------CEEETH
T ss_pred CCCHHHHHHHHHHCCCEEECC-HH-------HCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEEHH
T ss_conf 888999999999819643468-63-------4487889703999868855333114889986146488635
No 43
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=66.60 E-value=2.2 Score=18.87 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=40.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|-|.++.+..-+. -..+.+.++.|.+.++|..++..+.
T Consensus 13 ~nL~~~~t~~~l~~~F----~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~ln 70 (88)
T d1rk8a_ 13 TSIHEEAQEDEIQEKF----CDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALN 70 (88)
T ss_dssp ESCCTTCCHHHHHHHH----GGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 4899989899999999----872986410001234322556411689899999999999819
No 44
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.42 E-value=2.6 Score=18.46 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=40.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.+|.+.+--||.++| ..+|-|.++.+-.-+. ..+.+.++.|.+.++|..++..+.
T Consensus 17 ~nLp~~~t~~~L~~~F----~~~G~v~~v~~~~~~~-~~kg~afV~f~~~~~a~~Ai~~l~ 72 (93)
T d2cq3a1 17 SNIPFRFRDPDLRQMF----GQFGKILDVEIIFNER-GSKGFGFVTFENSADADRAREKLH 72 (93)
T ss_dssp ESCCTTCCHHHHHHHG----GGTSCEEEEEEECCTT-TTCCEEEEEESCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCEEEECCCCCCCC-CCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 7989989999999998----6344330001125666-774023789889999999999819
No 45
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.24 E-value=2 Score=19.09 Aligned_cols=54 Identities=13% Similarity=0.272 Sum_probs=39.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+--||..+| +.+|-|.++.+..-+. -+.+...++.|.+.+++.+++.
T Consensus 6 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~ 60 (77)
T d1uawa_ 6 GGLSWQTTQEGLREYF----GQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 60 (77)
T ss_dssp ESCCSSCCSHHHHHHH----TTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 1899969899999999----986986202441136788866639999889999999997
No 46
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.01 E-value=2.1 Score=19.08 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=40.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.|.+.+--||..+| ..+|-|+++.+-.-+. ...+..+++.|.+.++|..+++.+.
T Consensus 8 ~nLp~~~te~~l~~~f----~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~ 65 (82)
T d1fxla1 8 NYLPQNMTQEEFRSLF----GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLN 65 (82)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCEEECCCCCCEEEEEEEECCHHHHHHHHHHHC
T ss_conf 8989879899999999----996976410100002578730258999899999999999828
No 47
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.66 E-value=1.9 Score=19.28 Aligned_cols=51 Identities=18% Similarity=0.330 Sum_probs=37.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467544321000013526899999751
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
+..+.+.+--||..+| ..+|-|+++.+ .+ .+..+++.|++.++|..++..+
T Consensus 21 ~nlp~~~te~~l~~~F----~~fG~I~~~~~--~~---~k~~AfV~f~~~e~A~~ai~~~ 71 (104)
T d1wexa_ 21 RGLCESVVEADLVEAL----EKFGTICYVMM--MP---FKRQALVEFENIDSAKECVTFA 71 (104)
T ss_dssp ESCCSSCCHHHHHHHH----TTTSCEEEEEE--ET---TTTEEEEEESSHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEE--EE---CCEEEEEEECCHHHHHHHHHHH
T ss_conf 1899999799999766----02565349999--73---1103799868999999999987
No 48
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.53 E-value=2.3 Score=18.76 Aligned_cols=55 Identities=13% Similarity=0.201 Sum_probs=41.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-54432100001352689999975
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQL 243 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~ 243 (473)
+..|.+.+--||..+| ..+|-|.++.+..-+. ...+.++++.|.+.++|.+++..
T Consensus 14 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~ 69 (90)
T d2cqga1 14 LGLPWKTTEQDLKEYF----STFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 69 (90)
T ss_dssp ESCCSSCCHHHHHHHH----GGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHC
T ss_conf 7999989999999999----7626330000024788766677799997999999999866
No 49
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.93 E-value=2.1 Score=19.01 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=38.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+.-||..+| ..+|-|.++.+. +.+...++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~~~~~l~~~F----~~~G~i~~i~~~-----~~k~~afV~f~~~~~A~~A~~~l~ 65 (86)
T d2cpja1 14 GNLPPDITEEEMRKLF----EKYGKAGEVFIH-----KDKGFGFIRLETRTLAEIAKVELD 65 (86)
T ss_dssp ESCCTTCCHHHHHHHT----STTCCCSEEEEE-----TTTTEEEEECSSSHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCEEEEEE-----CCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7999879899999999----986986076342-----135369999889999999999819
No 50
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.11 E-value=1.8 Score=19.38 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=40.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-544321000013526899999751
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
+..+.+.+.-||..+| ..+|-|.++.+-..+. -+.+.++++.|.+.++|..++...
T Consensus 16 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~ 72 (103)
T d2cqda1 16 GGLPYHTTDASLRKYF----EGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 72 (103)
T ss_dssp ECCCSSCCHHHHHHHH----HTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCCCEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHC
T ss_conf 6999969599999877----61443211000233444556876999978999999999978
No 51
>d2p4pa1 d.145.1.4 (A:1-82) Hypothetical protein HD1797 {Haemophilus ducreyi [TaxId: 730]}
Probab=64.06 E-value=2.2 Score=18.92 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=31.0
Q ss_pred CCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 23734551144200222210012322234433432111311222123
Q gi|254780761|r 106 LRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 106 ~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
.++.+-.|.+.+.+.++++.+.-. + .|.+..+.||||++-..
T Consensus 3 ~dd~~~~v~g~~~l~d~~~~~~~~---~--~~~~~~~~TlgG~i~~~ 44 (82)
T d2p4pa1 3 RNEDSWLIDGATPLEDVMRALNIH---T--FPRDENYETIGGFMMYM 44 (82)
T ss_dssp CCCSEEEEETTSBHHHHHHHTTCC---C--SCCSCSSCBHHHHHHHH
T ss_pred ECCCEEEEEEECCHHHHHHHHCCC---C--CCCCCCCCCHHHHHHHH
T ss_conf 749889998107999999976999---8--98656730799999998
No 52
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.99 E-value=1.9 Score=19.27 Aligned_cols=56 Identities=14% Similarity=0.141 Sum_probs=39.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|-|..+.+..- ....+..+++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d-~~~~~~~afV~f~~~~~A~~A~~~l~ 69 (90)
T d2cqia1 14 GNLSRDVTEVLILQLF----SQIGPCKSCKMITE-HTSNDPYCFVEFYEHRDAAAALAAMN 69 (90)
T ss_dssp ESCCTTCCHHHHHHHH----HHHSCEEEEEEECC-CCSSCCEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEEECC-CCCCCEEEEEEECCHHHHHHHHHHCC
T ss_conf 8999979899999999----76399436644126-67641002888889999999999819
No 53
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.84 E-value=3.6 Score=17.58 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=41.0
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 653021122013322322233322346545431012799404675443210000135268999997
Q gi|254780761|r 177 TGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 177 ~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
.|..+.. +.+|-+.+--||.++|- .+|++ ++.+...+.-..+.++++.|.+.++|..++.
T Consensus 14 ~~~~v~v-~nLp~~~te~dl~~~F~----~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~ 73 (102)
T d1weza_ 14 TGHCVHM-RGLPYRATENDIYNFFS----PLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA 73 (102)
T ss_dssp SSCEEEE-ESCCTTCCHHHHHHSSC----SCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT
T ss_pred CCCEEEE-ECCCCCCCHHHHHHHHH----CCCCC-EEEEEEECCCCCEEEEEEEECCHHHHHHHHH
T ss_conf 9988998-08998688999987874----24752-2466772478604777899879999999997
No 54
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.29 E-value=1.5 Score=19.88 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=39.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467544321000013526899999751
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
+..+.+.+.-||..+| ..+|-|.++.+...+ -..+.++++.|++.++|..++..+
T Consensus 14 ~nLp~~~t~~~l~~~F----~~~G~v~~~~i~~~~-~~~kg~afV~f~~~~~A~~Ai~~l 68 (89)
T d1cvja2 14 KNLDKSIDNKALYDTF----SAFGNILSCKVVCDE-NGSKGYGFVHFETQEAAERAIEKM 68 (89)
T ss_dssp ESCCSSCCHHHHHHHH----HTTSCEEEEEECCBT-TBCCSCEEEEESCHHHHHHHTTSS
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEEEEEC-CCCCCEEEEEECCHHHHHHHHHHC
T ss_conf 2899999999999999----863996079998504-787403379989999999999980
No 55
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=63.09 E-value=2.9 Score=18.11 Aligned_cols=10 Identities=10% Similarity=-0.090 Sum_probs=3.9
Q ss_pred HHCCCEEEEC
Q ss_conf 8189189973
Q gi|254780761|r 423 SYGGSIAAEH 432 (473)
Q Consensus 423 ~~gG~is~eH 432 (473)
..+-++--||
T Consensus 168 ~~~Pv~~~e~ 177 (191)
T d1ik6a1 168 GDDPVVFLEP 177 (191)
T ss_dssp SSSCEEEEEE
T ss_pred CCCCEEEEEC
T ss_conf 9993999975
No 56
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.22 E-value=1.3 Score=20.23 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=39.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCC-CEEEEEEEECCC--CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543-101279940467--5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLG-IITGAVLRLLPY--RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlG-iITevtlrl~p~--p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+.-+|..+| ..+| .|+++.+--.+. ...+..+|+.|.+.++|..+++.+.
T Consensus 7 ~nLp~~~te~~l~~~f----~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~ 66 (96)
T d2disa1 7 GGIPKMKKREEILEEI----AKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLM 66 (96)
T ss_dssp ECCCTTSCHHHHHHHH----HHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTT
T ss_pred CCCCCCCCHHHHHHHH----HHHCCCCEEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 4989868899999999----98697505899864112323678759999839999999999976
No 57
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.15 E-value=3 Score=18.07 Aligned_cols=53 Identities=15% Similarity=0.081 Sum_probs=38.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
++.|.+.+--||..+| ..+|-|+.+.+.--+. ..+..+++.|.+.++|.+|+.
T Consensus 6 ~nlp~~~t~~~l~~~F----~~~G~I~~v~~~~~~~-~~~~~afV~F~~~~~a~~Al~ 58 (75)
T d2ghpa2 6 KNLPKSYNQNKVYKYF----KHCGPIIHVDVADSLK-KNFRFARIEFARYDGALAAIT 58 (75)
T ss_dssp EEECTTCCHHHHHHHH----GGGSCEEEEEEEECTT-SSSEEEEEEESSHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCEEEEEEEEECC-CCCEEEEEEECCHHHHHHHHH
T ss_conf 8999999889999987----1288169999975023-331699999832677688887
No 58
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=61.43 E-value=2 Score=19.09 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 37345511442002222100123222344334321113112221235
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
.+++..|.+.+.+.+|++.+. ..+| +..+.|||||+-...
T Consensus 4 ~Dg~~~v~G~~~l~dl~~~l~---~~l~----~~~~~Ti~G~v~~~l 43 (78)
T d2o1ra1 4 SDGSMIIDGSANLRDLNKMFN---WELD----TEDARTFNGLILEHL 43 (78)
T ss_dssp TTSCEEEETTCBHHHHHHHHC---CCCC----CSSCSBHHHHHHHHC
T ss_pred CCCEEEEEEECCHHHHHHHHC---CCCC----CCCCHHHHHHHHHHH
T ss_conf 697899982089999999879---7999----754057999999975
No 59
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.37 E-value=2.3 Score=18.72 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=39.7
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC----CCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 0133223222333223465454310127994046754----43210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRT----GKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~----~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+.+.+--||.++| +.+|=|+++.+...+... .+.++++.|.+-++|..++..+.
T Consensus 5 nLp~~~t~~~l~~~F----~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~ 64 (85)
T d2cpfa1 5 NLNFSTTEETLKGVF----SKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQ 64 (85)
T ss_dssp SCCTTCCHHHHHHHH----HTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHST
T ss_pred CCCCCCCHHHHHHHH----HHHCCCCCCCEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 899979899999999----983980322100023323545331378999899999999999829
No 60
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=59.82 E-value=2.1 Score=19.01 Aligned_cols=57 Identities=14% Similarity=0.125 Sum_probs=40.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675-443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYR-TGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p-~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+--||..+| ..+|-|.++.+...+.. ..+...++.|.+.++|..+++.+.
T Consensus 8 ~nLp~~~t~~~l~~~F----~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~ln 65 (82)
T d1b7fa1 8 NYLPQDMTDRELYALF----RAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLN 65 (82)
T ss_dssp ECCCTTCCHHHHHHHH----HTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf 6979979899999999----985981466466320368864224379899999999999868
No 61
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.80 E-value=2.4 Score=18.60 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=39.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.+.+.+--||..+| ..+|-|.++.+...+. ...+.+.++.|++.++|..++..+.
T Consensus 14 ~nL~~~~t~~~l~~~F----~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~ 71 (99)
T d1whwa_ 14 RNLSYTSSEEDLEKLF----SAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVD 71 (99)
T ss_dssp ECCCTTCCHHHHHHHH----HTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 7999869899999999----764975065310244434667504999889999999999829
No 62
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.76 E-value=3 Score=18.04 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=40.2
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.++.+.+--||..+| ..+|-|+.+.|..-+. ...+.++|+.|.+.++|..++.
T Consensus 26 gnLp~~~te~~L~~~F----~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~ 80 (103)
T d1x4ba1 26 GGLSFETTEESLRNYY----EQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80 (103)
T ss_dssp ECCTTCCCHHHHHHHH----TSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 5999858899999999----761866300001235677755769999787999999998
No 63
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.21 E-value=2.5 Score=18.57 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=39.0
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 01332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
.++.+.+--||..+| +.+|=|+++.+-..+. ...+.++++.|.+.++|..+++.+.
T Consensus 15 nLp~~~te~~l~~~f----~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~ 71 (104)
T d1p1ta_ 15 NIPYEATEEQLKDIF----SEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 71 (104)
T ss_dssp SCCTTSCHHHHHHHH----HTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSS
T ss_pred CCCCCCCHHHHHHHH----HCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 999869899999766----403322221101110001147846789899999999999809
No 64
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.70 E-value=2.5 Score=18.51 Aligned_cols=57 Identities=16% Similarity=0.106 Sum_probs=39.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|=|.++.+-.-+. ...+.++++.|.+.++|..++..+.
T Consensus 11 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~ 68 (89)
T d2cqba1 11 GGLAEEVDDKVLHAAF----IPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 68 (89)
T ss_dssp ESCCSSCCHHHHHHHH----TTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 6999868899999988----647838861102455654556304999889999999999859
No 65
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.57 E-value=2.8 Score=18.22 Aligned_cols=55 Identities=7% Similarity=0.006 Sum_probs=39.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 20133223222333223465454310127994046754432100001352689999975102
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQK 246 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 246 (473)
++.+.+.+--||.++| ..+|-|.++.+... +.+..+|+.|.+.++|..|+..+..
T Consensus 13 ~NL~~~vte~~L~~~F----~~~G~i~~~~i~~~---~~~g~aFV~f~~~e~A~~Ai~~ln~ 67 (108)
T d2adba1 13 ENLFYPVTLDVLHQIF----SKFGTVLKIITFTK---NNQFQALLQYADPVSAQHAKLSLDG 67 (108)
T ss_dssp CSCCSTTHHHHHHHHH----TTTSCEEEEEEEEE---TTEEEEEEEESCHHHHHHHHHHHHS
T ss_pred ECCCCCCCHHHHHHHH----CCCCCEEEEEEEEE---CCCCEEEEEECCHHHHHHHHHHHCC
T ss_conf 3929999899998887----03975899799850---8998189998999999999999778
No 66
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.40 E-value=3.2 Score=17.85 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=38.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 20133223222333223465454310127994046754432100001352689999975102
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQK 246 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 246 (473)
+..+.+.+--+|..+| ..+|-|.++.+.. ++.+..+++.|++.++|.+++..+..
T Consensus 16 ~NLp~~~te~~l~~~F----~~~G~v~~~~~~~---~~~~~~afV~f~~~~~A~~A~~~l~~ 70 (88)
T d2adca2 16 SNIPPSVSEEDLKVLF----SSNGGVVKGFKFF---QKDRKMALIQMGSVEEAVQALIDLHN 70 (88)
T ss_dssp ECCCTTCCHHHHHHHH----HTTSCCEEEEEEC---SSSTTCEEEEESSHHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCEEEEEEEE---ECCCCEEEEEECCHHHHHHHHHHCCC
T ss_conf 7999888999999985----3369788888753---02440069998999999999975169
No 67
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.00 E-value=3.6 Score=17.53 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=39.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--+|..+| ..+|=|..+.+.. -+..+.++++.|.+.++|..|+..+.
T Consensus 13 ~nLp~~~te~~l~~~F----~~~G~v~~i~~~~--~~~~kG~afV~f~~~~~A~~Ai~~l~ 67 (114)
T d2f9da1 13 RNLPYKITAEEMYDIF----GKYGPIRQIRVGN--TPETRGTAYVVYEDIFDAKNACDHLS 67 (114)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSCEEEEEEEC--STTTTTEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCEEEECCCC--CCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7999989899999998----5269867601234--67767769999788999999999828
No 68
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.80 E-value=2.6 Score=18.42 Aligned_cols=53 Identities=19% Similarity=0.390 Sum_probs=39.0
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 01332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.+.+.+--||..+| ..+|-|+++.+...+. .+.+.+.++.|.+-+++..++.
T Consensus 6 nl~~~~te~~l~~~F----~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~ 59 (75)
T d1hd0a_ 6 GLSWDTTKKDLKDYF----SKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 59 (75)
T ss_dssp CCCTTCCHHHHHHHH----HTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 899859899999999----754503333213588877767659999898999999996
No 69
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.31 E-value=4 Score=17.25 Aligned_cols=57 Identities=18% Similarity=0.118 Sum_probs=37.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEE-EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 20133223222333223465454310127-99404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGA-VLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITev-tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.+|.+.+--||.++| ..+|.+... .+.-.+.-..+..+++.|.+.++|..+++.+.
T Consensus 15 ~nLp~~~~~~di~~~F----~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~ 72 (86)
T d2cqpa1 15 QNMPFTVSIDEILDFF----YGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLN 72 (86)
T ss_dssp ESCCTTCCHHHHHHHT----TTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCC
T ss_conf 7989989899999877----512464269999768999966089999828579999999808
No 70
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=57.13 E-value=2.4 Score=18.70 Aligned_cols=43 Identities=9% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 23734551144200222210012322234433432111311222123
Q gi|254780761|r 106 LRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 106 ~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
.++++..|.+.+.+.++++.+ +..+|.+. +..+.||||++-..
T Consensus 8 ~~dg~~~v~G~~~l~dl~~~l---~~~l~~~e-~~~~~Tl~G~i~~~ 50 (87)
T d2oaia1 8 REDGSFLIDGTLPIEELREVL---GAELPDGE-ENNYHTLAGMCISY 50 (87)
T ss_dssp CTTSCEEEETTCBHHHHHHHH---TC--------CCCSBHHHHHHHH
T ss_pred CCCCEEEEEECCCHHHHHHHH---CCCCCCCC-CCCCCCHHHHHHHH
T ss_conf 189879998047999999987---88998643-45631599999998
No 71
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.97 E-value=3.3 Score=17.79 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 22322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 190 DNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 190 ~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+--||.++| ..+|-|+++.+ .+.+.|+.|++.++|..|++.+.
T Consensus 27 ~~~~~~L~~~F----~~~G~i~~~~i-------~rg~aFV~f~~~~~A~~Ai~~ln 71 (98)
T d1wf2a_ 27 VVKKSDVEAIF----SKYGKIVGCSV-------HKGFAFVQYVNERNARAAVAGED 71 (98)
T ss_dssp TCCHHHHHHSS----TTSSCEEEEEE-------ETEEEEEEESSHHHHHHHHHTTT
T ss_pred CCCHHHHHHHH----HHCCCEEEEEE-------ECCEEEEEECCHHHHHHHHHHCC
T ss_conf 19999999998----62698799997-------08868999799999999999819
No 72
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=56.90 E-value=2.8 Score=18.23 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=29.3
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 3734551144200222210012322234433432111311222123
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
.+.+-.|.+-+.+.++++++. +.+| +..+.|||||+-..
T Consensus 4 ~d~~~~v~G~~~l~dl~~~l~---~~l~----~~~~dTlgG~v~~~ 42 (84)
T d2rk5a1 4 ADNTYIVLGTMTLNDFNEYFE---TDLE----SDNVDTIAGFYLTG 42 (84)
T ss_dssp ETTEEEEETTSBHHHHHHHHT---CCCC----CTTCCBHHHHHHHH
T ss_pred CCCEEEEEEEEEHHHHHHHHC---CCCC----CCCCHHHHHHHHHH
T ss_conf 699999995349999999869---9965----46614299999998
No 73
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=56.65 E-value=3.9 Score=17.32 Aligned_cols=53 Identities=15% Similarity=0.188 Sum_probs=36.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--+|..+| ..+|-|.++.+ .+ ..+..+++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~t~~~l~~~f----~~~G~i~~v~~--~~--~~~g~afV~f~~~~~A~~A~~~l~ 66 (83)
T d2b0ga1 14 TNLPEETNEMMLSMLF----NQFPGFKEVRL--VP--NRHDIAFVEFTTELQSNAAKEALQ 66 (83)
T ss_dssp ESCCTTCCHHHHHHHH----TTSTTEEEEEE--CT--TTCSCEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----CCCCCEEEEEE--EC--CCCEEEEEECCCHHHHHHHHHHHC
T ss_conf 8899877799997542----35764787431--01--121148995199999999999839
No 74
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=56.55 E-value=2.6 Score=18.42 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=39.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.++.+.+--||..+| ..+|-|+++.+-..+. ...+.++|+.|.+.++|..++..+.
T Consensus 48 ~nLp~~~te~~l~~~F----~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~ln 105 (139)
T d1u6fa1 48 NYIPTTVDEVQLRQLF----ERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLN 105 (139)
T ss_dssp ESCSTTCCHHHHHHHH----HHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 6979889999999999----765003221111221111122203689799999999999848
No 75
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.26 E-value=5 Score=16.68 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=38.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC-CCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404-675443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLL-PYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~-p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.+|.+.+--||..+| ..+|++....+-.. .....+..+++.|.+.++|..++.
T Consensus 14 ~nLp~~~t~~~l~~~F----~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~ 68 (103)
T d2cpya1 14 TNIPFSITKMDVLQFL----EGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER 68 (103)
T ss_dssp ESCCTTSCHHHHHHHT----TTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG
T ss_pred ECCCCCCCHHHHHHHH----CCCCEEEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHH
T ss_conf 5989888889986421----022237778888768989857637899889999999996
No 76
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.13 E-value=3.2 Score=17.89 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=39.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|-|.++.+..-+. ...+.++++.|.+.++|..+++.+.
T Consensus 15 ~nLp~~~t~~~l~~~F----~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~ 72 (93)
T d1x5ua1 15 GGLDEKVSEPLLWELF----LQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMD 72 (93)
T ss_dssp ECCCTTCCHHHHHHHH----HTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSS
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 0899858899999999----984976542121012543566520799899999999999859
No 77
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.02 E-value=1.9 Score=19.27 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=37.2
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+.+.+--+|..+| ..+|-|+++.+ .+ .+...++.|.+.++|..|++.+.
T Consensus 27 ~L~~~vte~~L~~~F----~~~G~i~~i~~--~~---~k~~aFV~f~~~e~A~~A~~~ln 77 (101)
T d2cq2a1 27 GLGNGVSRNQLLPVL----EKCGLVDALLM--PP---NKPYSFARYRTTEESKRAYVTLN 77 (101)
T ss_dssp TGGGTCCHHHHHHHH----HHHSCEEEEEC--CT---TCSCEEEEESSHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHH----HHHCCCCEEEE--CC---CCCEEEEEECCHHHHHHHHHHHC
T ss_conf 899987899999999----75276617863--26---75089999899899999999838
No 78
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=55.19 E-value=4.2 Score=17.13 Aligned_cols=51 Identities=16% Similarity=0.111 Sum_probs=37.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++++.+.+--||..+| ..+|-|+.+.++ + ....++.|.+.++|..+++.+.
T Consensus 21 ~Nlp~~~~~~~L~~~F----~~~G~v~~~~i~--~----~g~afV~f~~~~~a~~Ai~~ln 71 (98)
T d1wg4a_ 21 SGLPPSGSWQDLKDHM----REAGDVCYADVQ--K----DGMGMVEYLRKEDMEYALRKLD 71 (98)
T ss_dssp ECCCSSCCHHHHHHHH----TTSSCEEEEEEE--T----TTEEEEEESSHHHHHHHHHHHS
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCCC--C----CCEEEEEECCHHHHHHHHHHHC
T ss_conf 7799999899999999----752234320013--3----4469999789999999999968
No 79
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.88 E-value=4.7 Score=16.80 Aligned_cols=51 Identities=14% Similarity=0.087 Sum_probs=37.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+.-||..+| +.+|-|+.+.+ .+ ..+.++.|.+.++|..|+..+.
T Consensus 6 ~nlp~~~~~~~l~~~F----~~~G~v~~~~i--~~----~g~afV~f~~~~~a~~Ai~~l~ 56 (87)
T d3begb1 6 SGLPPSGSWQDLKDHM----REAGDVCYADV--YR----DGTGVVEFVRKEDMTYAVRKLD 56 (87)
T ss_dssp EECCSSCCTTHHHHHH----GGGSCEEEEEE--CT----TSEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCCCC--CC----CCEEEEEECCHHHHHHHHHHHC
T ss_conf 7999858899999987----52212321100--22----3213577488899999999968
No 80
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.12 E-value=3.3 Score=17.77 Aligned_cols=57 Identities=12% Similarity=0.212 Sum_probs=40.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+--||..+| ..+|-|..+.+...+. ...+..+++.|.+.++|..+++.+.
T Consensus 11 ~nLp~~~t~~~l~~~F----~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~ 68 (90)
T d1x5sa1 11 GGLSFDTNEQSLEQVF----SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 (90)
T ss_dssp ESCCTTCCHHHHHHHH----HHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 7999868799998756----402222110110000333346638999878999999999809
No 81
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.00 E-value=5.2 Score=16.55 Aligned_cols=54 Identities=13% Similarity=0.217 Sum_probs=38.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.++.+.+-.+|..+| ..+|-|.++.+-.-+. -..+.+.++.|.+.+++..++.
T Consensus 24 ~nL~~~~te~~l~~~F----~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~ 78 (101)
T d2cq4a1 24 MQLAARIRPRDLEDFF----SAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 78 (101)
T ss_dssp ESCCTTCCHHHHHHHH----TTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----CCCCEEEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 8999989999999997----189749998865448876434148999899999999998
No 82
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=51.43 E-value=3.8 Score=17.38 Aligned_cols=42 Identities=21% Similarity=0.270 Sum_probs=30.3
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 37345511442002222100123222344334321113112221235
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
.+++-.|.+.+.+.++++.+. ..+|. .+..+.||||||-...
T Consensus 9 ~dg~~~v~G~~~l~dl~~~l~---~~l~~--e~~~~~TlgG~i~~~l 50 (85)
T d2p13a1 9 ADGTWLMDGWISIRKASNLLE---HDLVD--EAERYSTLGGYLLWQF 50 (85)
T ss_dssp TTSCEEEETTSBHHHHHHHHT---SCCCC--TTCCCCBHHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHC---CCCCC--CCCCCEEHHHHHHHHH
T ss_conf 898699992079999999888---79997--5555327999999985
No 83
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.38 E-value=5.9 Score=16.19 Aligned_cols=51 Identities=24% Similarity=0.425 Sum_probs=35.6
Q ss_pred ECCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 01332-2322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 186 KLIKD-NSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~-~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..++. .+.-||..+| ..+|-|.++.+ .+ .+...++.|++.++|..++..+.
T Consensus 15 nl~~~~~t~~eL~~lF----~~fG~I~~i~i--~~---~k~~afV~f~~~~~A~~A~~~l~ 66 (89)
T d1x4da1 15 DFQRGKNLRYQLLQLV----EPFGVISNHLI--LN---KINEAFIEMATTEDAQAAVDYYT 66 (89)
T ss_dssp SCCCSSSHHHHHHTTT----GGGSCEEEEEE--CS---SSSCEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHH----HHHCCEEEEEE--EC---CCEEEEEEECCHHHHHHHHHHHH
T ss_conf 8998767899999999----86387278876--04---42289999746055799999875
No 84
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.05 E-value=4.3 Score=17.07 Aligned_cols=57 Identities=21% Similarity=0.223 Sum_probs=39.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 20133223222333223465454310127994046754-43210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRT-GKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~-~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| +.+|-|.++.+...+... .+.++++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~te~~l~~~f----~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~ 71 (98)
T d1x4ha1 14 RNLSFDSEEEALGEVL----QQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAAS 71 (98)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHH----HCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 1899968899999877----512422033320366554566258999869999999998735
No 85
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=49.95 E-value=4.2 Score=17.10 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=29.8
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 37345511442002222100123222344334321113112221235
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
.+.+..|.+-+.+.++++.+ |.-+| +..+.|||||+-...
T Consensus 7 ~~~~~~v~G~~~l~dl~~~l---~~~l~----~~~~~Tl~G~~~~~l 46 (98)
T d2p3ha1 7 SPDKWLIDGDTPLDEVERAI---GYELP----EGDYETISGLLFDHA 46 (98)
T ss_dssp ETTEEEEETTCBHHHHHHHH---TSCCC----CSSCCBHHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHH---CCCCC----CCCCCCHHHHHHHHH
T ss_conf 79979998126999999987---98987----778417999999987
No 86
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.55 E-value=6.3 Score=16.01 Aligned_cols=51 Identities=24% Similarity=0.368 Sum_probs=36.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467544321000013526899999751
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
+..+.+.+--||..+| ..+|-|.++.+ .+ .+..+++.|.+.++|..++...
T Consensus 14 ~nLp~~~t~~~L~~~f----~~~G~i~~v~~--~~---~~~~afV~f~~~e~A~~a~~~~ 64 (88)
T d2cq1a1 14 RKLPGEVTETEVIALG----LPFGKVTNILM--LK---GKNQAFLELATEEAAITMVNYY 64 (88)
T ss_dssp ESCCTTCCHHHHHHTT----TTTSCEEEEEE--ET---TTTEEEEEESSHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HCCCCCCCCCC--CC---CCEEEEEEECCHHHHHHHHHHH
T ss_conf 6799888899999887----50242222000--23---4417999848999999999998
No 87
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=48.92 E-value=4.4 Score=17.00 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=28.6
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 3734551144200222210012322234433432111311222123
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
.+.+..|.+-+.+.++++.+. +-+| +..+.|||||+-..
T Consensus 7 ~~~~~~v~G~~~l~dl~~~l~---~~l~----~~~~~TigG~i~~~ 45 (84)
T d2r2za1 7 ADNEYLVQGRMLIDEFNEVFE---TDLH----MSDVDTMAGYLITA 45 (84)
T ss_dssp ETTEEEEETTSBHHHHHHHHT---CCCC----CTTCCBHHHHHHHH
T ss_pred CCCEEEEEEECCHHHHHHHHC---CCCC----CCCCHHHHHHHHHH
T ss_conf 799899996589999999879---6999----76614499999998
No 88
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=48.81 E-value=3 Score=18.02 Aligned_cols=44 Identities=7% Similarity=0.089 Sum_probs=30.4
Q ss_pred CCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 3734551144200222210012322234433432111311222123
Q gi|254780761|r 107 RSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 107 ~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
.+.+-.|.+-+.+.++++.+.-.-. ..++.+..+.|||||+-..
T Consensus 7 ~d~~~~v~G~~~l~dl~~~l~~~l~--~~~~~~~~~~Ti~G~i~~~ 50 (87)
T d2nqwa1 7 GDGSYLFEGKTSLSDVRHYLDLPEN--AFGELGDEVDTLSGLFLEI 50 (87)
T ss_dssp TTSCEEEETTCBHHHHHHHHTCCTT--TTHHHHTTCSBHHHHHHHH
T ss_pred CCCEEEEEEECCHHHHHHHHCCCCC--CCCCCCCCEEEHHHHHHHH
T ss_conf 8997999985799999998599755--5667655401499999997
No 89
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=48.31 E-value=4.7 Score=16.83 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 7421123734551144200222210012322234433432111311222123
Q gi|254780761|r 101 IRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 101 il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
|..++ +....|.+.+.+.+|++.+ |..+| +..+.|||||+-..
T Consensus 5 I~~~~--~~~~~v~g~~~l~dl~~~~---~~~l~----~~~~~TigG~i~~~ 47 (84)
T d2plia1 5 IHAVS--SERWRIHAATEIEDINTFF---GTEYS----SEEADTIGGLVIQE 47 (84)
T ss_dssp EEEEE--TTEEEEETTCBHHHHHHHH---CCCCC----CSSCCBHHHHHHHH
T ss_pred EEEEC--CCEEEEEECCCHHHHHHHH---CCCCC----CCCCHHHHHHHHHH
T ss_conf 09958--9979998118999999986---98998----54417899999997
No 90
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.03 E-value=3.8 Score=17.41 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=37.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279-940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAV-LRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevt-lrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+.-||..+| ..+|-|+++. +...+. ...+...++.|.+.++|..|+..+.
T Consensus 4 ~nLp~~~te~~l~~~F----~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~ 62 (83)
T d1x5ta1 4 GNLDPEIDEKLLYDTF----SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN 62 (83)
T ss_dssp ECCCTTCCHHHHHHHH----HTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTT
T ss_pred CCCCCCCCHHHHHHHH----HHHCCEEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 3898948699999999----8729450467997611332447539999899999999998579
No 91
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.91 E-value=3.9 Score=17.31 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=37.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC-CCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 20133223222333223465454310127994046-75443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLP-YRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p-~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+--||..+| +.+|-|..+.+-..+ .-+.+..+++.|.+.++|..+++.+.
T Consensus 7 ~nLp~~~t~~~l~~~f----~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~ 64 (81)
T d2ghpa1 7 TNFPPSYTQRNIRDLL----QDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLN 64 (81)
T ss_dssp ECCCTTCCHHHHHHHH----HHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7979869899999999----982968764220001123455215899899999999999869
No 92
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.48 E-value=5.8 Score=16.24 Aligned_cols=54 Identities=20% Similarity=0.227 Sum_probs=37.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.+|.+.+--||.++| ..+|++....+.+.+. -..+..+++.|.+.++|.+++.
T Consensus 21 ~nLP~~~te~dI~~~F----~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~ 75 (104)
T d1wg5a_ 21 RGLPFGCSKEEIVQFF----SGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK 75 (104)
T ss_dssp ESCCTTCCHHHHHHHT----TTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 5899989899999988----753872478897768999723688997489999999874
No 93
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.37 E-value=2.5 Score=18.50 Aligned_cols=52 Identities=17% Similarity=0.207 Sum_probs=36.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..|.+.+.-||.++| +.+|.|+...+.. .+..+++.|.+.++|..+++.+.
T Consensus 7 ~nLp~~~te~~L~~~F----~~~G~i~~~~~~~-----~rg~aFV~f~~~~~A~~Ai~~ln 58 (80)
T d2cqha1 7 GNLSPAVTADDLRQLF----GDRKLPLAGQVLL-----KSGYAFVDYPDQNWAIRAIETLS 58 (80)
T ss_dssp ECCCTTCCHHHHHHHH----HHTTCCCSSCEEE-----ETTEEEECCSCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHHCCEEEEEEEC-----CCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7999989999999999----9809689737861-----26649999888787999999817
No 94
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.10 E-value=2.8 Score=18.24 Aligned_cols=54 Identities=19% Similarity=0.305 Sum_probs=38.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+.-+|..+| ..+|-|.++.+-.-+. .+.+.+.++.|.+.+++.+++.
T Consensus 5 gnLp~~~te~~l~~~F----~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~ 59 (75)
T d1x0fa1 5 GGLSPDTPEEKIREYF----GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 59 (75)
T ss_dssp ESCCSSCCHHHHHHHH----HHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 1899989899999999----985876521224465545665289999788999999983
No 95
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.20 E-value=7.4 Score=15.59 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 332232223332234654543101279940467-544321000013526899999
Q gi|254780761|r 188 IKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLL 241 (473)
Q Consensus 188 ~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~ 241 (473)
+.+.+-.+|.++| +.+|-|..+.+...+. ...+...++.|.+.++|..++
T Consensus 106 p~~~te~~L~~~f----~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al 156 (183)
T d1u1qa_ 106 KEDTEEHHLRDYF----EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 156 (183)
T ss_dssp CTTCCHHHHHHHH----GGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHH
T ss_pred CCCCCHHHHHHHH----CCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHH
T ss_conf 7767899996543----15886532233002666850105999978999999999
No 96
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=44.89 E-value=6.6 Score=15.91 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=41.6
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCC--HHH
Q ss_conf 589954998999999999987298299975887776540104888669997630027742112373455114420--022
Q gi|254780761|r 44 PLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGIN--LFN 121 (473)
Q Consensus 44 ~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~--~~~ 121 (473)
..|++..+.+++.++.+.+.+.+++++=..=.| .. .+.-|..+...-..+.+++|.. ..+
T Consensus 17 ipvlr~~~~~~~~~~~~al~~~Gi~~iEitl~~-----------~~-------a~~~I~~l~~~~p~~~vGaGTV~~~~~ 78 (212)
T d1vhca_ 17 VPVIALDNADDILPLADTLAKNGLSVAEITFRS-----------EA-------AADAIRLLRANRPDFLIAAGTVLTAEQ 78 (212)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS-----------TT-------HHHHHHHHHHHCTTCEEEEESCCSHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCC-----------HH-------HHHHHHHHHHCCCCCEEEEEECCCHHH
T ss_conf 999968999999999999998799889995788-----------15-------899999998628873476631465899
Q ss_pred HHHHCCCCCCCCCCCC
Q ss_conf 2210012322234433
Q gi|254780761|r 122 VQKIAEKNHRLFPLSL 137 (473)
Q Consensus 122 l~~~l~~~g~~~p~~p 137 (473)
+++. ...|-.|-++|
T Consensus 79 ~~~a-~~aGa~FivSP 93 (212)
T d1vhca_ 79 VVLA-KSSGADFVVTP 93 (212)
T ss_dssp HHHH-HHHTCSEEECS
T ss_pred HHHH-HHHCCCEEECC
T ss_conf 9999-86178689778
No 97
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.71 E-value=5.9 Score=16.19 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 192 SRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 192 ~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.-||.++| +.+|-|+++.+. +.+...++.|.+.++|..++..+.
T Consensus 16 te~~L~~~F----~~~G~I~~v~~~-----~~~~~afV~f~~~~~A~~Ai~~ln 60 (79)
T d2bz2a1 16 TPTLLRGAF----SPFGNIIDLSMD-----PPRNCAFVTYEKMESADQAVAELN 60 (79)
T ss_dssp CHHHHHHHH----STTCCCSCEEEE-----TTTTEEEEECSSHHHHHHHHHHHT
T ss_pred CHHHHHHHH----HCCCCCCEEEEC-----CCCCEEEEEECCCHHHHHHHHHHC
T ss_conf 999999998----550756435202-----689889999924189999999859
No 98
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.89 E-value=3.6 Score=17.58 Aligned_cols=51 Identities=24% Similarity=0.337 Sum_probs=35.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.|.+.+--||..+| ..+|+.. +. + ...+...++.|++.++|..+++.+.
T Consensus 11 ~nLp~~~t~~~l~~lF----~~~G~~~-~~--~---~~~kg~afV~f~~~~~A~~Ai~~ln 61 (88)
T d1wg1a_ 11 KNLPQDSNCQEVHDLL----KDYDLKY-CY--V---DRNKRTAFVTLLNGEQAQNAIQMFH 61 (88)
T ss_dssp ESCCSSCCHHHHHHHT----CSSCCCC-EE--E---EGGGTEEEECCSCHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCEE-EE--E---ECCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 6999863757887778----8609603-53--0---1157714899889999999999858
No 99
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.13 E-value=7.2 Score=15.67 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=36.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.++.+.+--+|.++| .-+|-|+.+.+ .+ .+...++.|.+.++|..++..+.
T Consensus 23 ~nLp~~~t~~~l~~~f----~~~G~i~~~~~--~~---~~~~afV~f~~~~~A~~A~~~l~ 74 (97)
T d1whya_ 23 GGLGPNTSLAALAREF----DRFGSIRTIDH--VK---GDSFAYIQYESLDAAQAACAKMR 74 (97)
T ss_dssp ECCCSSCCHHHHHHHH----HTTSCEEEEEE--CS---SSCCEEEEESSHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHH----HHHCCCCEEEE--EC---CCCEEEECCCCHHHHHHHHHHHC
T ss_conf 4899989899999999----75345624764--02---22178761499999999999858
No 100
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.62 E-value=4.6 Score=16.91 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=36.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675-443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYR-TGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p-~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+--||..+| ..+|.|..+.+...+.. ..+...++.|.+.+++..++.
T Consensus 5 ~nLp~~~te~~l~~~F----~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~ 59 (75)
T d2msta_ 5 GGLSVNTTVEDVKHYF----EQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp ECCCSSCCHHHHHHHH----HTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 0899988899999999----986874022332103433567336999989999999995
No 101
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=42.42 E-value=1.2 Score=20.59 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=37.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.++.+.+--||..+| ..+|.|..+.+.-......+.+.++.|.+.+++..++.
T Consensus 19 ~nL~~~~te~~l~~~F----~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~ 72 (91)
T d1fjeb1 19 GNLNPNKSVAELKVAI----SELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE 72 (91)
T ss_dssp ECCCTTSCHHHHHHHH----HHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH----HCCCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 5765761288999998----63784787541006899853776786389999999982
No 102
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.90 E-value=8.3 Score=15.27 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=38.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+--||..+| ..+|-|.++.+-.-+. -..+..+++.|.+.++|-.++.
T Consensus 12 ~nlp~~~te~~l~~~F----~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~ 66 (84)
T d1l3ka1 12 GGLSFETTDESLRSHF----EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 66 (84)
T ss_dssp ESCCTTCCHHHHHHHH----GGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHHCCCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 7999979899999999----750645210001146679962289999868999999998
No 103
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.18 E-value=6 Score=16.17 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=36.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||.++| ..+|.|....++ ..+..+++.|.+.++|..++..+.
T Consensus 14 ~nLp~~~te~~l~~~F----~~~g~i~~~~~~-----~~rg~afV~f~~~~~A~~Ai~~l~ 65 (86)
T d2cpda1 14 RNLMLSTSEEMIEKEF----NNIKPGAVERVK-----KIRDYAFVHFSNREDAVEAMKALN 65 (86)
T ss_dssp ESCCTTCCHHHHHHHH----HTTSTTCEEEEE-----ECSSEEEEEESSHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHH----CCCCEEEEEEEC-----CCCEEEEEEECCHHHHHHHHHHCC
T ss_conf 2989978899999862----065326557975-----542799998699999999999809
No 104
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.05 E-value=5.9 Score=16.20 Aligned_cols=51 Identities=14% Similarity=0.189 Sum_probs=36.0
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+.+.+-.+|..+| ..+|-|.++.+ . +.+...++.|.+.++|..|+..+.
T Consensus 25 nL~~~~te~~L~~~F----~~fG~i~~v~i--~---~~kg~afV~f~~~~~A~~Ai~~l~ 75 (96)
T d1x4ga1 25 GIASGLTDQLMRQTF----SPFGQIMEIRV--F---PEKGYSFVRFSTHESAAHAIVSVN 75 (96)
T ss_dssp CCSSCCCHHHHHHHH----HHHSCEEEEEE--E---TTTTEEEEEESSHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHH----HHHCCCEEEEE--E---ECCEEEEEEECCHHHHHHHHHHHC
T ss_conf 899989999999999----98299669999--7---013089999899999999999819
No 105
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.68 E-value=8.7 Score=15.15 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=38.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675-443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYR-TGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p-~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+..|.+.+.-||..+| ..+|-|.++.+...+.. ..+...++.|.+.+++.+++.
T Consensus 8 ~nLp~~~te~~l~~~F----~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~ 62 (79)
T d1l3ka2 8 GGIKEDTEEHHLRDYF----EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 62 (79)
T ss_dssp ECCTTTCCHHHHHHHH----TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 7989858799999999----975513322103578875544189999938999999999
No 106
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.31 E-value=6.2 Score=16.07 Aligned_cols=41 Identities=12% Similarity=-0.109 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 33322346545431012799404675443210000135268999997510
Q gi|254780761|r 196 IRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 196 l~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
|..+| ..+|.|.++.+. +.+...++.|.+.++|..|+..+.
T Consensus 27 l~~lF----~~~G~i~~~~~~-----k~~~~afV~f~~~~~A~~Ai~~ln 67 (104)
T d1weya_ 27 FESLF----RTYDKDTTFQYF-----KSFKRVRINFSNPLSAADARLRLH 67 (104)
T ss_dssp HHHHH----HTTCSSCEEEEE-----TTTTEEEEECSSTTHHHHHHHTST
T ss_pred HHHHH----CCCCCCEEEEEE-----CCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 99872----035552689996-----688789999899999999999855
No 107
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=40.10 E-value=8.9 Score=15.09 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=44.1
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECC-CCCCCCCCCCCCCEEEECCCCC--HHH
Q ss_conf 8995499899999999998729829997588777654010488866999763-0027742112373455114420--022
Q gi|254780761|r 45 LVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIK-RMNRIRDIDLRSNTIAVDAGIN--LFN 121 (473)
Q Consensus 45 ~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~-~mn~il~id~~~~~v~veaGv~--~~~ 121 (473)
.|++..+.+++..+.+.+.+.+++++=. .++.. .++.|..+..+-..+.+++|.. ..+
T Consensus 19 pvlr~~~~~~a~~~~~al~~~Gi~~iEi-------------------tl~tp~a~~~I~~l~~~~p~~~vGaGTV~~~~~ 79 (213)
T d1wbha1 19 PVIVVKKLEHAVPMAKALVAGGVRVLNV-------------------TLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQ 79 (213)
T ss_dssp EEECCSSGGGHHHHHHHHHHTTCCEEEE-------------------ESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHH
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEE-------------------ECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
T ss_conf 9997899999999999999879988999-------------------379825999999999978987152230463899
Q ss_pred HHHHCCCCCCCCCCCCC
Q ss_conf 22100123222344334
Q gi|254780761|r 122 VQKIAEKNHRLFPLSLP 138 (473)
Q Consensus 122 l~~~l~~~g~~~p~~p~ 138 (473)
+++. ...|-.|-++|.
T Consensus 80 ~~~a-~~aGa~FivSP~ 95 (213)
T d1wbha1 80 LAEV-TEAGAQFAISPG 95 (213)
T ss_dssp HHHH-HHHTCSCEEESS
T ss_pred HHHH-HHCCCCEEECCC
T ss_conf 9999-977992997898
No 108
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=39.77 E-value=9 Score=15.06 Aligned_cols=28 Identities=4% Similarity=-0.035 Sum_probs=22.3
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 5899549989999999999872982999
Q gi|254780761|r 44 PLVLLPSCTHEVSQILKLATETNTSITP 71 (473)
Q Consensus 44 ~~Vv~P~~~~ev~~iv~~a~~~~i~v~p 71 (473)
..|++..+.+|+.++.+.+.+.+++++=
T Consensus 20 ipvl~~~~~~~a~~~~~al~~~Gi~~iE 47 (216)
T d1mxsa_ 20 LPVITIAREEDILPLADALAAGGIRTLE 47 (216)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999789999999999999987998899
No 109
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}
Probab=37.03 E-value=9.9 Score=14.79 Aligned_cols=26 Identities=15% Similarity=0.051 Sum_probs=12.2
Q ss_pred HHHHHHCCCCC-EECCHHHHHHHHCCC
Q ss_conf 99997338441-866989987731340
Q gi|254780761|r 10 QRFISIVGSEG-ILDDQKLISPYLTEE 35 (473)
Q Consensus 10 ~~l~~i~g~~~-v~~d~~~~~~~~~d~ 35 (473)
++|..|++.+. --.|-..+-.-..|.
T Consensus 19 ~~l~~iiP~~~~~~yd~r~iI~~l~D~ 45 (299)
T d1pixa3 19 DDLYSMVPLNDKRAYDIYNVIARLFDN 45 (299)
T ss_dssp GGHHHHSCSSTTSCCCHHHHHHTTSGG
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHCCC
T ss_conf 999731889999887789999986128
No 110
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=36.18 E-value=9.1 Score=15.03 Aligned_cols=59 Identities=10% Similarity=0.018 Sum_probs=35.0
Q ss_pred HHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEEC--CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 9999733844186698998773134013676687589954--9989999999999872982999
Q gi|254780761|r 10 QRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLP--SCTHEVSQILKLATETNTSITP 71 (473)
Q Consensus 10 ~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P--~~~~ev~~iv~~a~~~~i~v~p 71 (473)
..|++ +|-..|...|-.-.++..++ .|...-...|-| +|.+|+.++++.|++++|.|+.
T Consensus 36 dyi~~-LGv~~i~l~Pv~~~~~~~~~--GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~Vil 96 (400)
T d1eh9a3 36 DYLKD-LGITAIEIMPIAQFPGKRDW--GYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVIL 96 (400)
T ss_dssp HHHHH-HTCCEEEECCCBCCSSSCCC--STTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH-CCCCEEEECCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 89997-59988996876768899999--978777788582219999999999999763771354
No 111
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.85 E-value=5.4 Score=16.43 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=32.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEE------EEECC---CCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279------94046---75443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAV------LRLLP---YRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevt------lrl~p---~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+..+.+.+--||..+| ..+|-|.... .++.. ....+.++++.|.+.++|..|+..+.
T Consensus 14 ~nLp~~~te~~l~~~F----~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~ 79 (101)
T d2cpea1 14 QGLNDSVTLDDLADFF----KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFD 79 (101)
T ss_dssp ECCCTTCCHHHHHHHH----TTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 7999868899999878----87743787563253036775426644434123587669999999999839
No 112
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}
Probab=35.68 E-value=9.8 Score=14.83 Aligned_cols=23 Identities=4% Similarity=0.143 Sum_probs=12.6
Q ss_pred ECCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 54998999999999987298299
Q gi|254780761|r 48 LPSCTHEVSQILKLATETNTSIT 70 (473)
Q Consensus 48 ~P~~~~ev~~iv~~a~~~~i~v~ 70 (473)
.|.+.+-..+.+++|+++++||+
T Consensus 82 ~~~~a~Ka~~fi~lc~~~~iPli 104 (263)
T d1xnya2 82 DITASEKAARFVRTCDAFNVPVL 104 (263)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 64259999999999997198569
No 113
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.92 E-value=8.8 Score=15.10 Aligned_cols=53 Identities=17% Similarity=0.168 Sum_probs=34.5
Q ss_pred ECCCCCCCCC-CCCCCCCCCCCCCCEEEEEEEECCC--CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 0133223222-3332234654543101279940467--5443210000135268999997
Q gi|254780761|r 186 KLIKDNSRYD-IRDLLIGSEGTLGIITGAVLRLLPY--RTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 186 ~~~~~~~G~d-l~~l~~GseGtlGiITevtlrl~p~--p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.+.+.+--| |..+| ..+|-|+++.+...+. ...+.++++.|.+.++|..+++
T Consensus 11 nLp~~~t~ed~l~~~F----~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~ 66 (86)
T d2ghpa3 11 NLSTELLDENLLRESF----EGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ 66 (86)
T ss_dssp EECTTTCCHHHHHHHH----GGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG
T ss_pred CCCCCCCCHHHHHHHH----HHHHHCCCEEEECCCCCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 9997743499999997----7531211100000257765552265689889999999996
No 114
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=33.37 E-value=10 Score=14.73 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=35.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.++.+.+--||.++| +.+|-|..+.. ....+.+.++.|.+.++|..++..+.
T Consensus 22 ~nL~~~~te~~l~~~F----~~~g~v~~~~~----~~~~~~~afV~f~~~~~A~~A~~~l~ 74 (96)
T d1fjca_ 22 KNLSFNITEDELKEVF----EDALEIRLVSQ----DGKSKGIAYIEFKSEADAEKNLEEKQ 74 (96)
T ss_dssp ESCCSSCCHHHHHHHH----CSEEEECCEEE----TTEEEEEEEEEESSHHHHHHHHHHTT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEEE----CCCCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 1899879899999999----75165605634----37506688898689999999999829
No 115
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.24 E-value=6 Score=16.15 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=35.9
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 186 KLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 186 ~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+.+.+.-||...|..-.+.+|=|.++. +.+-...+..+++.|.+.++|..++....
T Consensus 10 nLp~~~t~~dl~~~l~~~f~~~G~i~~i~--~~~~~~~~g~afV~F~~~~~A~~A~~~~~ 67 (91)
T d1nu4a_ 10 NLNEKIKKDELKKSLHAIFSRFGQILDIL--VSRSLKMRGQAFVIFKEVSSATNALRSMQ 67 (91)
T ss_dssp SCCTTSCHHHHHHHHHHHHGGGSCEEEEE--CCHHHHHTTCEEEEESSHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCEE--EEEECCCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 99999999999999998703123255328--85430689815788899999999999849
No 116
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=32.20 E-value=9.8 Score=14.83 Aligned_cols=38 Identities=5% Similarity=0.182 Sum_probs=24.6
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 4551144200222210012322234433432111311222123
Q gi|254780761|r 110 TIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN 152 (473)
Q Consensus 110 ~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~ 152 (473)
+..|..-+.+.+|++.+ ++.+|.+ ...+.|||||+-..
T Consensus 2 s~~vdG~~~i~dl~~~l---~~~~~~~--~~~~~Ti~G~vl~~ 39 (76)
T d2o3ga1 2 SLTVEGALEYVELAPQL---NLPQQEE--DADFHTVAGLIMEE 39 (76)
T ss_dssp CSEEETTCBHHHHTTTT---TCCCCCT--TCSCSBHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHH---CCCCCCC--CCCCCCHHHHHHHH
T ss_conf 69998177899999977---8599864--55531489999998
No 117
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.04 E-value=12 Score=14.18 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 22322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 190 DNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 190 ~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
..+--+|..+| ..+|-|.++.+.. ..+..+++.|.+.++|..|+..+.
T Consensus 14 ~~te~~L~~~F----~~fG~I~~v~i~~----~~kg~afV~f~~~~~A~~ai~~ln 61 (109)
T d2adca1 14 RVTPQSLFILF----GVYGDVQRVKILF----NKKENALVQMADGNQAQLAMSHLN 61 (109)
T ss_dssp TCCHHHHHHHH----HHHTCEEEEEECC----TTSCCEEEEESCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHH----HHCCCCCEEEEEE----CCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 29999999987----5035640499976----034258999778799999999839
No 118
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.63 E-value=7.1 Score=15.69 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=33.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.++.+.+--||..+| +.+|-|.++. +.. ..+.+.++.|.+.++|..++.
T Consensus 11 ~nLp~~~te~~L~~~F----~~~G~v~~v~--~~~--~~~gfafV~f~~~~~a~~a~~ 60 (88)
T d1wf0a_ 11 GRCTGDMTEDELREFF----SQYGDVMDVF--IPK--PFRAFAFVTFADDQIAQSLCG 60 (88)
T ss_dssp ESCCSSSCHHHHHHHS----TTTSCCCEEE--CCS--SCCSCCEEECSCHHHHHHTTT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCEEEE--EEE--CCCCEEEEEECCHHHHHHHHH
T ss_conf 2899889899998889----9829844999--942--137658999889999999972
No 119
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.03 E-value=12 Score=14.34 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=33.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2013322322233322346545431012799404675443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
++.|.+.+--||..+| +.+|+.. . ++ ...+...++.|++.++|.++++.+.
T Consensus 4 ~nLp~~~t~~~l~~~F----~~~g~~~-~--~~---~~~~g~afv~f~~~~~A~~Ai~~ln 54 (75)
T d1wi6a1 4 RGLPGDVTNQEVHDLL----SDYELKY-C--FV---DKYKGTAFVTLLNGEQAEAAINTFH 54 (75)
T ss_dssp ECCCTTCCHHHHHHHT----TTSCEEE-E--EE---ETTTTEEEEEESSHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HCCCCCC-E--EE---CCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 6999967899999987----4325221-1--55---4632169999877788888889857
No 120
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.90 E-value=13 Score=14.06 Aligned_cols=52 Identities=21% Similarity=0.268 Sum_probs=31.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC--CCCCCCCCCCCCHHHHHHHH
Q ss_conf 2013322322233322346545431012799404675--44321000013526899999
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYR--TGKQVAFIAVNSLEQALQLL 241 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p--~~~~~~~~~f~~~~~a~~~~ 241 (473)
..++.+.+--||..+| ..+|+ .++.+-..+.. ..+.+.++.|.+.++|.+++
T Consensus 21 ~nLp~~~te~~l~~~f----~~~g~-~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~ 74 (104)
T d1wi8a_ 21 GNLPYDVTEESIKEFF----RGLNI-SAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL 74 (104)
T ss_dssp ESCCSSCCHHHHHHHT----TTSCE-EEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHH----HHHCC-CCCEEEEEECCCCCCCEEEEEEECCHHHHHHHH
T ss_conf 0999869899999999----98321-531023431147886135457877999999999
No 121
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.93 E-value=13 Score=13.96 Aligned_cols=38 Identities=24% Similarity=0.178 Sum_probs=26.6
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 45431012799404675443210000135268999997510
Q gi|254780761|r 205 GTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 205 GtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.+|-|+.+.+. .+..+...++.|.+.++|..|+..+.
T Consensus 41 ~~~G~V~~v~~~---~~~~~G~~fV~f~~~e~A~~A~~~ln 78 (99)
T d2dita1 41 SKFGQIRKLLLF---DRHPDGVASVSFRDPEEADYCIQTLD 78 (99)
T ss_dssp GGTSCCSEEEEE---TTCTTCEEEEECSCHHHHHHHHHHST
T ss_pred CCCCCEEEEECC---CCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 676607999634---77886479999898999999999868
No 122
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.89 E-value=4.7 Score=16.81 Aligned_cols=57 Identities=21% Similarity=0.219 Sum_probs=36.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 201332232223332234654543101279940467-5443210000135268999997510
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY-RTGKQVAFIAVNSLEQALQLLQLSQ 245 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~-p~~~~~~~~~f~~~~~a~~~~~~~~ 245 (473)
+.++.+.+.-||..+| +.+|-|..+.+...+. -..+..+++.|.+.++|..|+..+.
T Consensus 24 ~nLp~~~t~~~l~~~f----~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~ 81 (102)
T d2cpxa1 24 KNLSPRVTERDLVSLF----ARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVN 81 (102)
T ss_dssp ECCCTTCCHHHHHHHT----HHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHST
T ss_pred ECCCCCCCHHHHHHHH----HHCCCEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf 6999989899999978----534542467753046655555321477433789999999858
No 123
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=27.69 E-value=14 Score=13.82 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=21.4
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 899549989999999999872982999
Q gi|254780761|r 45 LVLLPSCTHEVSQILKLATETNTSITP 71 (473)
Q Consensus 45 ~Vv~P~~~~ev~~iv~~a~~~~i~v~p 71 (473)
.|++-.+.+++..+.+.+.+.+++++=
T Consensus 13 pvlr~~~~~~a~~~~~al~~~Gi~~iE 39 (202)
T d1wa3a1 13 AVLRANSVEEAKEKALAVFEGGVHLIE 39 (202)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 999789999999999999986998899
No 124
>d2p0la1 d.104.1.3 (A:4-272) Lipoate-protein ligase A {Streptococcus agalactiae [TaxId: 1311]}
Probab=27.33 E-value=14 Score=13.78 Aligned_cols=38 Identities=11% Similarity=-0.027 Sum_probs=28.6
Q ss_pred CCCCCCCCEEEECCCH---HHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 3676687589954998---99999999998729829997588
Q gi|254780761|r 37 KIYHGTSPLVLLPSCT---HEVSQILKLATETNTSITPQGGN 75 (473)
Q Consensus 37 ~~~~~~p~~Vv~P~~~---~ev~~iv~~a~~~~i~v~prGgg 75 (473)
..++. +.+|+..+.. .++..-+.+|.+++++|+-|-.|
T Consensus 47 ~~w~~-~ptvvlG~~q~~~~~~e~~~~~~~~~gi~vvRR~sG 87 (269)
T d2p0la1 47 HIWPM-TKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFG 87 (269)
T ss_dssp EECCB-SSEEEECTTGGGCTTHHHHHHHHHTTTCEEEECTTC
T ss_pred EEECC-CCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCC
T ss_conf 99348-998998987676821888899999859958996579
No 125
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.41 E-value=15 Score=13.68 Aligned_cols=50 Identities=24% Similarity=0.324 Sum_probs=34.7
Q ss_pred ECCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 01332-232223332234654543101279940467544321000013526899999751
Q gi|254780761|r 186 KLIKD-NSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLS 244 (473)
Q Consensus 186 ~~~~~-~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 244 (473)
..|.+ .+--||..+| ..+|-|.++.+ . +.+..+++.|.+.++|..++...
T Consensus 25 nLp~~~~te~~l~~~F----~~fG~V~~v~~--~---~~k~~afV~f~~~~~A~~Ai~~~ 75 (99)
T d1x4fa1 25 NLPHSGYSDSAVLKLA----EPYGKIKNYIL--M---RMKSQAFIEMETREDAMAMVDHC 75 (99)
T ss_dssp SCCCSSCCSHHHHTTT----TTTSCCSEEEE--E---TTTTEEEEECSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHH----CCCCCEEEEEE--E---ECCCCEEEEECCHHHHHHHHHHH
T ss_conf 7867753899998665----34453048987--6---04772799963568999999997
No 126
>d1di6a_ c.57.1.1 (A:) MogA {Escherichia coli [TaxId: 562]}
Probab=26.24 E-value=15 Score=13.66 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=28.1
Q ss_pred EEEECCCHHHHHHHHHHH-HHCCCCEEEECCCCCCC
Q ss_conf 899549989999999999-87298299975887776
Q gi|254780761|r 45 LVLLPSCTHEVSQILKLA-TETNTSITPQGGNTGLV 79 (473)
Q Consensus 45 ~Vv~P~~~~ev~~iv~~a-~~~~i~v~prGggt~~~ 79 (473)
..+.|.+.+++++.+..+ .+.+.-++.-.||||.+
T Consensus 43 ~~IVpDd~~~I~~~l~~~~~~~~~DlIlTTGGTG~s 78 (190)
T d1di6a_ 43 TRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 78 (190)
T ss_dssp EEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 889798688999999999732486199955774566
No 127
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}
Probab=25.69 E-value=15 Score=13.60 Aligned_cols=13 Identities=15% Similarity=0.176 Sum_probs=9.6
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 4998999999999
Q gi|254780761|r 49 PSCTHEVSQILKL 61 (473)
Q Consensus 49 P~~~~ev~~iv~~ 61 (473)
.-+++++.+.++-
T Consensus 42 g~~~~~i~~~l~~ 54 (434)
T d2z67a1 42 GIDDEKIKLFLKF 54 (434)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
T ss_conf 9999999999999
No 128
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.22 E-value=16 Score=13.42 Aligned_cols=51 Identities=29% Similarity=0.372 Sum_probs=33.3
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC-CCCCHHHHCCC
Q ss_conf 4551144200222210012322234433432111311222123-56400011257
Q gi|254780761|r 110 TIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATN-AGGTAVLSYGN 163 (473)
Q Consensus 110 ~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~-~~G~~s~~yG~ 163 (473)
++.|+||..+.-+...|++.|.-.-+ . .....+||++.+. -.|..-..||.
T Consensus 4 v~IIGaG~sGl~~A~~L~~~g~~V~i-i--Ek~~~iGG~~~t~~~~g~~~~~~G~ 55 (298)
T d1i8ta1 4 YIIVGSGLFGAVCANELKKLNKKVLV-I--EKRNHIGGNAYTEDCEGIQIHKYGA 55 (298)
T ss_dssp EEEECCSHHHHHHHHHHGGGTCCEEE-E--CSSSSSSGGGCEEEETTEEEETTSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEE-E--ECCCCCCCCEEEECCCCEEEEECCC
T ss_conf 99989759999999999968996799-9--8899763616886728988762385
No 129
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=22.44 E-value=18 Score=13.21 Aligned_cols=26 Identities=0% Similarity=0.058 Sum_probs=22.2
Q ss_pred EEECC--CHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99549--989999999999872982999
Q gi|254780761|r 46 VLLPS--CTHEVSQILKLATETNTSITP 71 (473)
Q Consensus 46 Vv~P~--~~~ev~~iv~~a~~~~i~v~p 71 (473)
.|-|+ +.+|..++|+.|++++|.|+.
T Consensus 72 ~vd~~~Gt~~efk~lV~~~H~~GI~Vil 99 (390)
T d1ud2a2 72 TVRTKYGTKAQLERAIGSLKSNDINVYG 99 (390)
T ss_dssp BSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 7688899999999999999855881389
No 130
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.20 E-value=18 Score=13.18 Aligned_cols=54 Identities=11% Similarity=0.118 Sum_probs=36.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC-CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 20133223222333223465454310127994046-75443210000135268999997
Q gi|254780761|r 185 HKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLP-YRTGKQVAFIAVNSLEQALQLLQ 242 (473)
Q Consensus 185 ~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p-~p~~~~~~~~~f~~~~~a~~~~~ 242 (473)
+.+|.+.+--||..+| +.+|+++.+.+.... --..+..+++.|.+.++|-.++.
T Consensus 24 ~nLp~~~t~~di~~~F----~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~ 78 (112)
T d1wela1 24 KGLPFEAENKHVIDFF----KKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 78 (112)
T ss_dssp ECCCTTCCHHHHHHHS----CSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHH----HHCCCCCCCEEEECCCCCCEEEEEEEEECCHHHHHHHHH
T ss_conf 4699757599996677----533444321022107654300478999889999999997
Done!