HHsearch alignment for GI: 254780762 and conserved domain: PRK00076
>PRK00076 recR recombination protein RecR; Reviewed.
Probab=100.00 E-value=0 Score=548.59 Aligned_cols=197 Identities=47% Similarity=0.821 Sum_probs=195.2
Q ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 68667999999997568999537999999997199899999999999999851828899973345654100355556736
Q gi|254780762|r 5 ITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASV 84 (201)
Q Consensus 5 ~~~~~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~~~~~~~l~~~l~~~~~~i~~C~~C~~l~~~~~C~iC~d~~Rd~~~ 84 (201)
T Consensus 1 ~~p~~i~~LI~~l~kLPGIG~KsA~Rla~~LL~~~~~~~~~L~~~i~~~~~~i~~C~~C~~lse~~~C~IC~d~~Rd~~~ 80 (197)
T PRK00076 1 MYPPPIEKLIEALRKLPGIGPKSAQRLAFHLLQRDREGGLRLAKALEEAKEKIKHCSVCGNLTEEDPCEICSDPRRDRSL 80 (197)
T ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 98789999999998789998899999999998299999999999999999708818255996888868344774778767
Q ss_pred EEEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 99983588999997517401342101210020002681112889999985157855499994699786899999999820
Q gi|254780762|r 85 IIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLK 164 (201)
Q Consensus 85 lCVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~lk 164 (201)
T Consensus 81 icVVE~~~Dl~~iE~s~~y~G~YhVLgG~lSpl~gi~pe~l~i~~L~~Ri~~~~v~EVIlA~~~t~EGe~Ta~yi~~~lk 160 (197)
T PRK00076 81 LCVVESPADVLAIERTGEYRGLYHVLGGLLSPLDGIGPEDLNIDELLERLADGEVKEVILATNPTVEGEATAHYIARLLK 160 (197)
T ss_pred EEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99986899999997579454783585662482128983226889999986579951799864898650899999999865
Q ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 1798088741467488206663479999998306479
Q gi|254780762|r 165 GIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 (201)
Q Consensus 165 ~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~~l 201 (201)
T Consensus 161 ~~~ikitrlA~GiP~G~~ley~D~~TL~~Al~~R~~i 197 (197)
T PRK00076 161 PLGVKVTRLAHGVPVGGELEYVDEGTLSRALEGRREL 197 (197)
T ss_pred HCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHCCCC
T ss_conf 5497077765447778540027899999999847279