HHsearch alignment for GI: 254780762 and conserved domain: PRK09137

>PRK09137 DNA topoisomerase I; Validated.
Probab=95.97  E-value=0.074  Score=33.92  Aligned_cols=105  Identities=23%  Similarity=0.394  Sum_probs=60.2

Q ss_pred             CEEEEEECHHHHHHHHHHCCEEEEEEEHH--HHCCCC----CCCCHHH-C------------CHHHHHHHHCCCCCCEEE
Q ss_conf             36999835889999975174013421012--100200----0268111-2------------889999985157855499
Q gi|254780762|r   83 SVIIVVEDVADLWALERSKAVNALYHVLG--GSLSPL----DRIGPED-I------------GIQSLIERIEVKKIRELI  143 (201)
Q Consensus        83 ~~lCVVE~~~Di~~IE~t~~y~G~YhVLg--G~ispl----~g~~p~~-l------------~i~~L~~ri~~~~i~EVI  143 (201)
T Consensus         2 K~LvIvEsPskAk~I~~~L--G~~y~V~as~GHi~dL~~~~~~~d~~~~f~p~y~~~~~~kk~i~~lk~l~--k~ad~Ii   77 (761)
T PRK09137          2 KNLVIVESPAKAKTIEKYL--GNDFKVLASYGHVRDLPSKQGSVDPEDDFKMKYQVIERSKKHIDAIKKAA--KDADNLY   77 (761)
T ss_pred             CEEEEECCHHHHHHHHHHH--CCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH--HCCCEEE
T ss_conf             7499985879999999971--94989999835343177645785725598444688964789999999998--3899899


Q ss_pred             EEECCCCCHHHHHHHHHHHHCCC----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             99469978689999999982017----980887414674882066634799999983064
Q gi|254780762|r  144 FAISATIEGQTTAHYIMDKLKGI----DVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT  199 (201)
Q Consensus       144 lA~~~t~EGe~Ta~yi~~~lk~~----~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~  199 (201)
T Consensus        78 lAtDpDREGE~Ia~~i~~~l~~~~~~~~k~v~Ri~f~--------eiT~~aI~~A~~np~  129 (761)
T PRK09137         78 LATDPDREGEAISWHLLEVLKSKRLLKDKKVQRVVFH--------EITKSAVQDAIANPR  129 (761)
T ss_pred             ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE--------CCCHHHHHHHHHCCC
T ss_conf             8988880500999999999672335799845999980--------289999999986756