HHsearch alignment for GI: 254780762 and conserved domain: PRK13844
>PRK13844 recombination protein RecR; Provisional.
Probab=100.00 E-value=0 Score=554.49 Aligned_cols=200 Identities=35% Similarity=0.655 Sum_probs=198.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98666866799999999756899953799999999719989999999999999985182889997334565410035555
Q gi|254780762|r 1 MQKKITGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQR 80 (201)
Q Consensus 1 M~~~~~~~~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~~~~~~~l~~~l~~~~~~i~~C~~C~~l~~~~~C~iC~d~~R 80 (201)
T Consensus 1 m~~~~~~~~i~~LI~~l~kLPGIG~KsA~Rla~~Ll~~~~~~~~~L~~~l~~~~~~i~~C~~C~~lse~~~C~IC~d~~R 80 (200)
T PRK13844 1 MTSKIFSPKISAVIESLRKLPTIGKKSSQRLALYLLDKSPETAIAIANSLLDATANIKKCVYCQALTEDDVCNICSNTNR 80 (200)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99765889999999998168998788999999998649998999999999999968764788998068887646799998
Q ss_pred CCCEEEEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 67369998358899999751740134210121002000268111288999998515785549999469978689999999
Q gi|254780762|r 81 DASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIM 160 (201)
Q Consensus 81 d~~~lCVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~ 160 (201)
T Consensus 81 d~~~iCVVE~~~Dl~aiE~s~~y~G~YhVL~G~iSpl~gigp~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~ 160 (200)
T PRK13844 81 DDTKLCIIESMLDMIAIEEAGIYRGKYFVLNGRISPLDGIGPSELKLDILQQIIADRKIDEVILAISPTVEGETTAHFIS 160 (200)
T ss_pred CCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 89889998368999999974410668887487447323888223067999988637997479996799965099999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98201798088741467488206663479999998306479
Q gi|254780762|r 161 DKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 (201)
Q Consensus 161 ~~lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~~l 201 (201)
T Consensus 161 ~~l~~-~ikitrLA~GlP~G~~ley~D~~TL~~Al~~R~~i 200 (200)
T PRK13844 161 QMIAK-DIKISRIGFGVPFGGELEYLDQQTLLHAFNARTNI 200 (200)
T ss_pred HHHCC-CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 98449-97277665447778531006899999999737279