HHsearch alignment of GI: 254780762 and MMDB domain: 1gku_B_1-29_235-251_501-675

>1gku_B (B:1-29,B:235-251,B:501-675) Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus}

Probab=95.33  E-value=0.045  Score=34.93  Aligned_cols=54  Identities=20%  Similarity=0.273  Sum_probs=44.2

Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             785549999469978689999999982017980887414674882066634799999983064
Q gi|254780762|r  137 KKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT  199 (201)
Q Consensus       137 ~~i~EVIlA~~~t~EGe~Ta~yi~~~lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~  199 (201)
                      .++++||+||.+.-|||.-+..|.+.++. ..++.|+=+        .-+....+.+||++.+
T Consensus       167 k~aD~IIiATD~DREGE~I~~eIl~~~~~-~~~v~R~~f--------sslT~~~I~~Af~nlk  220 (221)
T 1gku_B          167 HDAEFVIVGTDPDTEGEKIAWDLKNLLSG-CGAVKRAEF--------HEVTRRAILEALESLR  220 (221)
T ss_dssp             HHHSEEEECCCSSHHHHHHHHHHHHHHTT-SSEEEECCC--------SBCSHHHHHHHHTSCB
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHCC-CCHHHHHHH--------HHHHHHHHHHHHHHHH
T ss_conf             46708998079887643155568877500-232348888--------8999999999999876