HHsearch alignment of GI: 254780762 and MMDB domain: 2fcj_A_

>2fcj_A (A:) Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus}
Probab=91.81  E-value=1.2  Score=25.47  Aligned_cols=101  Identities=10%  Similarity=0.056  Sum_probs=66.5

Q ss_pred             CCCCEEEEEECHHHHHHHHHHCCEEEEEEEHHH-HCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf             567369998358899999751740134210121-0020002681112889999985157855499994699786899999
Q gi|254780762|r   80 RDASVIIVVEDVADLWALERSKAVNALYHVLGG-SLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHY  158 (201)
Q Consensus        80 Rd~~~lCVVE~~~Di~~IE~t~~y~G~YhVLgG-~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~y  158 (201)
                      |..+.+-|||-..|++++.+.| |+..=-+++| .++      .+.  + +++.|.  ....+||+++...--|+.-+.-
T Consensus         2 ~k~~~viIVEG~~D~i~l~~~G-~~n~Va~~~gta~~------~~~--l-~~l~~~--~~~~~iil~~D~D~aG~~a~~~   69 (119)
T 2fcj_A            2 RRVEKVIIVEGRSDKQKVAAVL-NEPVVIVCTNGTIS------DAR--L-EELADE--LEGYDVYLLADADEAGEKLRRQ   69 (119)
T ss_dssp             CCCCEEEEESSHHHHHHHHHHB-SSCCEEEECCSCCC------HHH--H-HHHHHH--TTTSEEEEECCSSHHHHHHHHH
T ss_pred             CCCCEEEEECCHHHHHHHHHHC-CCCEEECCCCCCCC------HHH--H-HHHHHH--CCCCEEEEEECCCCHHHHHHHH
T ss_conf             7289899980889999999818-98869768986373------999--9-999997--0898489984489288999999


Q ss_pred             HHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             999820179808874146748820666347999999830
Q gi|254780762|r  159 IMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRS  197 (201)
Q Consensus       159 i~~~lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~  197 (201)
                      +.+.+.  .+++-.+..|-.   ..++.+..-+..++.+
T Consensus        70 l~~~l~--~~~~~~~~~~~~---~~~~~~~~d~~e~l~~  103 (119)
T 2fcj_A           70 FRRMFP--EAEHLYIDRAYR---EVAAAPIWHLAQVLLR  103 (119)
T ss_dssp             HHHHCT--TSEEECCCTTTC---STTTSCHHHHHHHHHH
T ss_pred             HHHHCC--CCCEEEECCCCC---CHHCCCHHHHHHHHHH
T ss_conf             998678--553888546541---0202456789999997