HHsearch alignment of GI: 254780762 and MMDB domain: 2gai_A_1-35_63-127

>2gai_A (A:1-35,A:63-127) DNA topoisomerase I; zinc ribbon; HET: DNA; 1.70A {Thermotoga maritima MSB8} PDB: 2gaj_A*
Probab=93.30  E-value=0.15  Score=31.39  Aligned_cols=95  Identities=22%  Similarity=0.271  Sum_probs=64.2

Q ss_pred             CEEEEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             36999835889999975174013421012100200026811128899999851578554999946997868999999998
Q gi|254780762|r   83 SVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDK  162 (201)
Q Consensus        83 ~~lCVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~  162 (201)
                      ....|||+|.-+..||..  .--.|-|..       ..|-.+ -++.|.+..+   ..+||+||.|.-|||.-+..|.+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~kkk-~i~~Lkkl~k---~adIIiATD~DREGE~Ia~eIl~~   72 (100)
T 2gai_A            6 KKYIVVESPAKAKTIKSI--LGNEYEVFA-------SMGKEK-VVEKLKDLAK---KGELLIASDMDREGEAIAWHIARV   72 (100)
T ss_dssp             -CEEEESCHHHHHHHHHH--HGGGSEEEE-------CCSCHH-HHHHHHHHHH---HSCEEECCCSSHHHHHHHHHHHHH
T ss_pred             CEEEEECCHHHHHHHHHH--CCCCCEEEE-------ECCHHH-HHHHHHHHHC---CCCEEECCCCCCCCCHHHHHHHHH
T ss_conf             579998797999999998--094989996-------146699-9999999846---898999489981520999999998


Q ss_pred             HCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             2017980887414674882066634799999983064
Q gi|254780762|r  163 LKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT  199 (201)
Q Consensus       163 lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~  199 (201)
                      ++. ..++.|+-+        .-+++..+.+||+|.+
T Consensus        73 ~~~-~kpvkRl~f--------sslT~~~I~~A~~nlR  100 (100)
T 2gai_A           73 TNT-LGRKNRIVF--------SEITPRVIREAVKNPR  100 (100)
T ss_dssp             HTC-TTSSCBCCC--------SSCCHHHHHHHHHSCB
T ss_pred             HCC-CCCEEEEEE--------ECCCHHHHHHHHHCCH
T ss_conf             588-898058997--------1079999999996816