HHSEARCH alignment of GI: 254780762 and SCOP domain: d1cuka2

Alignment

Probab=96.36  E-value=0.0011  Score=43.13  Aligned_cols=32  Identities=22%  Similarity=0.569  Sum_probs=23.7

Q ss_pred             CCCHHHHHHH-----HHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             6866799999-----9997568999537999999997
Q gi|254780762|r    5 ITGKEIENLI-----KILARIPGFGPRSARRATLHLV   36 (201)
Q Consensus         5 ~~~~~l~~LI-----~~l~kLPGIG~KsA~R~a~~Ll   36 (201)
                      +.++.+.+.|     ..|+++||||+|+|+|+.+.|-
T Consensus        29 ~~~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~eLk   65 (78)
T d1cuka2          29 MSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMK   65 (78)
T ss_dssp             SCHHHHHHHHHTTCHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             8999999999806888712299978999999999999

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: DNA helicase RuvA subunit, middle domain
domain: DNA helicase RuvA subunit, middle domain
species: Escherichia coli [TaxId: 562]