HHSEARCH alignment of GI: 254780762 and SCOP domain: d2a1jb1

Alignment

Probab=91.45  E-value=0.097  Score=30.08  Aligned_cols=29  Identities=3%  Similarity=0.098  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             66799999999756899953799999999
Q gi|254780762|r    7 GKEIENLIKILARIPGFGPRSARRATLHL   35 (201)
Q Consensus         7 ~~~l~~LI~~l~kLPGIG~KsA~R~a~~L   35 (201)
                      ...+.+++..|+.+||||++.|++++-+.
T Consensus        11 ~~~~~~~~~~L~~I~gIg~~~a~~L~~~F   39 (78)
T d2a1jb1          11 QDFVSRVTECLTTVKSVNKTDSQTLLTTF   39 (78)
T ss_dssp             HHHHHHHHHHHTTSTTCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             88199999986389975999999999993

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Hef domain-like
domain: DNA excision repair protein ERCC-1
species: Human (Homo sapiens) [TaxId: 9606]